Rmu_sc0003748.1_g000015

Purple acid phosphatase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003748.1
Physical Location & Seq
Forward (+)
39253 .. 39868
616 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003748.1_g000015.1.cds

Sequence Viewer

Length: 396 bp
atggctggaataactggagtgaatccacccacaacgccattgccgaaggtgggattggtcgttgtcgtcgttggtggacttggaatggttgcagttgtggtcggagttgtggtaggtgtagtacttgtccctccagccgtgatgcaaatttggacaaatgcctctaaaggtaacggtgagatgatggaaattgcacatgcggatgaaccaggaaactgcccgcaaccatctacgatgcctggtcataatatggggggtttctgtgcacttaatttcacttcaggccgagcagcaggaaagttctgttgggatgagcaacccaactatagtgcatatagagaaagtagctttgggcatgggcttgttgaggtaattccttttctctttgctacataa

Protein Analysis

131

Amino Acids

13.56

Weight (kDa)

5.42

Isoelectric Point (pI)

26.12

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0019737)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 200, 221
AcsI RAATTY 1 cut(s) 147
AcuI CTGAAG 1 cut(s) 264
AfaI GTAC 1 cut(s) 123
AfiI CCNNNNNNNGG 1 cut(s) 50
AjnI CCWGG 2 cut(s) 208, 238
AjuI GAANNNNNNNTTGG 6 cut(s) 38, 70, 289, 321, 333, 365
AluBI AGCT 1 cut(s) 348
AluI AGCT 1 cut(s) 348
Alw21I GWGCWC 1 cut(s) 268
Alw44I GTGCAC 1 cut(s) 264
AoxI GGCC 1 cut(s) 283
ApaLI GTGCAC 1 cut(s) 264
ApeKI GCWGC 1 cut(s) 290
ApoI RAATTY 1 cut(s) 147
AsuHPI GGTGA 1 cut(s) 188
BaeGI GKGCMC 1 cut(s) 268
Bbv12I GWGCWC 1 cut(s) 268
BbvI GCAGC 1 cut(s) 302
BccI CCATC 2 cut(s) 178, 235
BceAI ACGGC 1 cut(s) 122
BciT130I CCWGG 2 cut(s) 210, 240
BfmI CTRYAG 1 cut(s) 325
BisI GCNGC 1 cut(s) 291
BlsI GCNGC 1 cut(s) 292
BmcAI AGTACT 1 cut(s) 123
Bme1390I CCNGG 2 cut(s) 210, 240
BmrFI CCNGG 2 cut(s) 210, 240
BmsI GCATC 2 cut(s) 132, 225
BpmI CTGGAG 2 cut(s) 36, 117
BsaXI ACNNNNNCTCC 2 cut(s) 96, 126
Bsc4I CCNNNNNNNGG 1 cut(s) 50
Bse1I ACTGG 1 cut(s) 19
Bse3DI GCAATG 1 cut(s) 38
BseBI CCWGG 2 cut(s) 210, 240
BseGI GGATG 2 cut(s) 208, 316
BseLI CCNNNNNNNGG 1 cut(s) 50
BseMI GCAATG 1 cut(s) 38
BseNI ACTGG 1 cut(s) 19
BseSI GKGCMC 1 cut(s) 268
BseXI GCAGC 1 cut(s) 302
BshFI GGCC 1 cut(s) 285
BsiHKAI GWGCWC 1 cut(s) 268
BslFI GGGAC 1 cut(s) 113
BslI CCNNNNNNNGG 1 cut(s) 50
BsmFI GGGAC 1 cut(s) 113
BsnI GGCC 1 cut(s) 285
Bsp1286I GDGCHC 1 cut(s) 268
BspACI CCGC 2 cut(s) 200, 221
BspANI GGCC 1 cut(s) 285
BsrDI GCAATG 1 cut(s) 38
BsrI ACTGG 1 cut(s) 19
Bst2UI CCWGG 2 cut(s) 210, 240
Bst4CI ACNGT 1 cut(s) 176
BstC8I GCNNGC 1 cut(s) 221
BstF5I GGATG 2 cut(s) 208, 316
BstNI CCWGG 2 cut(s) 210, 240
BstNSI RCATGY 1 cut(s) 200
BstSCI CCNGG 2 cut(s) 208, 238
BstSFI CTRYAG 1 cut(s) 325
BstSLI GKGCMC 1 cut(s) 268
BstV1I GCAGC 1 cut(s) 302
BsuRI GGCC 1 cut(s) 285
BtsCI GGATG 2 cut(s) 208, 316
Cac8I GCNNGC 1 cut(s) 221
Csp6I GTAC 1 cut(s) 122
CviAII CATG 2 cut(s) 197, 356
CviJI RGCY 5 cut(s) 5, 137, 285, 348, 361
CviKI_1 RGCY 5 cut(s) 5, 137, 285, 348, 361
CviQI GTAC 1 cut(s) 122
Eco57I CTGAAG 1 cut(s) 264
EcoRII CCWGG 2 cut(s) 208, 238
FaeI CATG 2 cut(s) 200, 359
FaiI YATR 8 cut(s) 198, 246, 251, 327, 334, 336, 357, 394
FaqI GGGAC 1 cut(s) 113
FatI CATG 2 cut(s) 196, 355
FauI CCCGC 1 cut(s) 228
Fnu4HI GCNGC 1 cut(s) 291
FokI GGATG 2 cut(s) 215, 323
Fsp4HI GCNGC 1 cut(s) 291
GluI GCNGC 1 cut(s) 291
GsuI CTGGAG 2 cut(s) 36, 117
HaeIII GGCC 1 cut(s) 285
Hin1II CATG 2 cut(s) 200, 359
HinfI GANTC 1 cut(s) 22
HphI GGTGA 1 cut(s) 188
Hpy166II GTNNAC 2 cut(s) 77, 266
Hpy188I TCNGA 1 cut(s) 104
Hpy8I GTNNAC 2 cut(s) 77, 266
Hpy99I CGWCG 1 cut(s) 71
HpyAV CCTTC 1 cut(s) 40
HpyCH4III ACNGT 1 cut(s) 176
HpyCH4V TGCA 5 cut(s) 92, 145, 194, 266, 332
Hsp92II CATG 2 cut(s) 200, 359
LpnPI CCDG 7 cut(s) 147, 195, 222, 225, 252, 267, 279
Lsp1109I GCAGC 1 cut(s) 302
LweI GCATC 2 cut(s) 132, 225
MaeIII GTNAC 1 cut(s) 170
MhlI GDGCHC 1 cut(s) 268
MluCI AATT 4 cut(s) 147, 189, 271, 372
MmeI TCCRAC 1 cut(s) 82
MnlI CCTC 3 cut(s) 141, 172, 361
MseI TTAA 1 cut(s) 270
MslI CAYNNNNRTG 1 cut(s) 201
MspR9I CCNGG 2 cut(s) 210, 240
MvaI CCWGG 2 cut(s) 210, 240
NlaIII CATG 2 cut(s) 200, 359
NmeAIII GCCGAG 1 cut(s) 311
NspI RCATGY 1 cut(s) 200
PcsI WCGNNNNNNNCGW 2 cut(s) 41, 66
PfeI GAWTC 1 cut(s) 22
PkrI GCNGC 1 cut(s) 292
Psp6I CCWGG 2 cut(s) 208, 238
PspGI CCWGG 2 cut(s) 208, 238
RsaI GTAC 1 cut(s) 123
RsaNI GTAC 1 cut(s) 122
RseI CAYNNNNRTG 1 cut(s) 201
SaqAI TTAA 1 cut(s) 270
SatI GCNGC 1 cut(s) 291
ScaI AGTACT 1 cut(s) 123
ScrFI CCNGG 2 cut(s) 210, 240
SduI GDGCHC 1 cut(s) 268
SetI ASST 5 cut(s) 51, 118, 172, 350, 372
SfaNI GCATC 2 cut(s) 132, 225
SfcI CTRYAG 1 cut(s) 325
SmiMI CAYNNNNRTG 1 cut(s) 201
Sse9I AATT 4 cut(s) 147, 189, 271, 372
SsiI CCGC 2 cut(s) 200, 221
StyD4I CCNGG 2 cut(s) 208, 238
TaaI ACNGT 1 cut(s) 176
TasI AATT 4 cut(s) 147, 189, 271, 372
TatI WGTACW 1 cut(s) 121
TfiI GAWTC 1 cut(s) 22
Tru1I TTAA 1 cut(s) 270
Tru9I TTAA 1 cut(s) 270
TseI GCWGC 1 cut(s) 290
TspDTI ATGAA 1 cut(s) 219
VneI GTGCAC 1 cut(s) 264
XapI RAATTY 1 cut(s) 147
XceI RCATGY 1 cut(s) 200
ZrmI AGTACT 1 cut(s) 123
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.