Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr10

Orthogroup ID

OG0006530

Physical Location & Seq

Genomic Coordinates Forward (+)

19919012 .. 19920781

Gene Structure 1770 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1770 bp

ATGGATTTACATCCCGAGCAGGAAGACCAGCAGGACTCAAAACCCAGAAGCTACTGGAGCAGATGGAGCAAGCAGGACTTCTTCCCAGAATACACATTCCAGAACTTCAATTCCTACAAGGACGCCCTCTCCCACACCCCCTCCCGCCTCAAGGACCGCCTCCTCCACCGCTCCTCCGACTCCTTCGAGCTCCTCCAGCTCCCCAAACAGAGCGAGAATCTTATGAAGCGCTGCCTCACCTGGTGGGACTTAATCTGGCTCGGCTTCGGCGCCGTCGTTGGTTCAGGCATTTTCGTGATCACTGGGCAGGCAACCCGCGATGACGCCGGTCCGGCCATTGTTCTCTCCTACGCCGTCTCTGGTTTCTCTGCTATGCTCTCGGTTCTATGCTACACGGAGTTCGCCGTCGAAGTCCCAGTTGCCGGCGGGTCATTTTCGTACCTTCGGATAGAATTGGGGGACTTTGTGGCGTTCATTGCGGCCGGGAACATTCTCCTGGAGGCTCTGGTGGGTTCGGCAGGGCTCGGAAGGTCTTGGTCTTCTTACTTTGCCAGCATTTTTCGGACTGATGACACCGATTTTCTTCGGATCCGGGTAAAATCTCTGCCTGATGGGTTTAATCTTTTGGACCCAATTGCTGTTGTGGTGCTTTTGGTTGCTAATAGTATTGCAATGAGTGGAACTAGGAGGACTTCTGTGTTGAATTGGATTGCCTCCATAGCTAGTGGTTTGATCATTGTGTTTATATTGATTGTTGGGTTTGTTAAGGGAAAGACTGAGAATTTGGTACCCTTTTTCCCATATGGGGCAAAGGGCGTTTTCGAGGCGGCTGCTGTTGTGTACTGGTCTTATACTGGTTTCGACATGGTTGCCAATATGGCCGAGGAGGCAAAGAAGCCCTCGAGGGACATACCGGTTGGTTTGGTTGGTTCTATGAGTTTGATCTCAGTGGTTTATTGCTTGATGGCTTTGGTGTTGTGTATGATGCAGAAATACACTCAAATCGATAGAGATGCTGCTTATTCGGTTGCTTTTGAGGCAATTGGGATGAATTGGGCTAAGTACATAGTGAGTATATGCGCCCTCAAGGGAATGACTACAAGCCTGCTGGTTGGGTCTATGGGGCAAGCTAGGTATACCACTCAGATTGCAAGAGCTCATATGATTTCACCCTGGTTTGCTTTGGTTCACCCAAAAACTGGAACCCCCATTTATGCTACCGTATTGGTAACCTTAGTCAGTGCAGTTGTTGCACTATTCACTAGTCTGGATGTGCTGTCAACCGTCTTCTCCTTCAGTACGCTCTGCATATTTATGTTTGTGGCTATAGCATTGCTTGTGAGGCGGTATTATGTTAAGGATGTGACACCAACGACTGATTTGGTCCAGTTCCTTGTATGTTTATTCTTAATAATCGGTTCTTCTACAGGAATTACAACGATTTGGAATACAGGGATGCGAGGGTGGGTTTGGTATGTAGTGTTTTCTGTGATTTGGTTAGTGGGGACTTTGTGGATGGCATTGCTTCCAAAGCACCGGGTTCCTAAGGTTTGGGGGGTTCCACTTGTTCCATGGTTGCCTGCATTGTCGATTGGCATTAATGTTTTTCTCATTGGGTCTCTGGGTTATGTTGCATTCTTGAGGTTTTTCATTTGCACTGCAGTCATGGTTCTCTACTATTTGTTCGTTGGTGTACACGCAACATATGATGTAGCTCACCAGATTGAACAAGAACCAAGAACTCAAGAGGGAAATGAAAATACTAGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005886 GO:0016020 GO:0031090 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0071944 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AA_permease_2 AA_permease_C

Protein Analysis

590

Amino Acids

65.36

Weight (kDa)

7.57

Isoelectric Point (pI)

32.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AA_permease_2	PF13520	79 - 470	2.1e-49	Amino acid permease
AA_permease	PF00324	84 - 472	5.1e-23	Amino acid permease
AA_permease_C	PF13906	518 - 567	1.8e-15	C-terminus of AA_permease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006530)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17120
fragaria_vesca	FvH4_3g16770
malus_domestica	MD05G1206900.v1.1
prunus_persica	Prupe.4G150300_v2.0.a1
pyrus_communis	pycom05g19300 pycom10g16780
rosa_chinensis	RchiOBHm_Chr5g0028011 RchiOBHm_Chr5g0028021
rosa_laevigata	RLG00000033057 RLG00000033058
rosa_multiflora	Rmu_sc0009432.1_g000015 Rmu_sc0009432.1_g000016 Rmu_sc0009432.1_g000017 Rmu_sc0009561.1_g000001
rosa_roxburghii	Rroxscaffold_1G00051640 Rroxscaffold_1G00051650
rosa_rugosa	Rorug05G0103300 Rorug05G0103500
rosa_samantha	Rh5AG197100 Rh5BG195200 Rh5BG195300 Rh5CG215300 Rh5DG196800 Rh5DG196900
rosa_wichuraiana	Rw5G017960 Rw5G017970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AbsI	CCTCGAGG	1 cut(s)	901
Acc65I	GGTACC	1 cut(s)	787
AccB1I	GGYRCC	2 cut(s)	269, 787
AccB7I	CCANNNNNTGG	1 cut(s)	1199
AccBSI	CCGCTC	1 cut(s)	171
AccI	GTMKAC	1 cut(s)	1136
AccII	CGCG	1 cut(s)	318
AciI	CCGC	8 cut(s)	145, 157, 169, 316, 426, 479, 827, 1345
AclWI	GGATC	2 cut(s)	583, 596
AcoI	YGGCCR	3 cut(s)	333, 480, 879
AcsI	RAATTY	1 cut(s)	781
AcuI	CTGAAG	1 cut(s)	1279
AcyI	GRCGYC	3 cut(s)	123, 270, 324
AdeI	CACNNNGTG	1 cut(s)	243
AfaI	GTAC	6 cut(s)	440, 789, 842, 1064, 1300, 1695
AfeI	AGCGCT	1 cut(s)	230
AfiI	CCNNNNNNNGG	4 cut(s)	151, 422, 805, 1199
AgeI	ACCGGT	1 cut(s)	913
AgsI	TTSAA	3 cut(s)	109, 703, 1727
AhlI	ACTAGT	2 cut(s)	1262, 1763
AjnI	CCWGG	3 cut(s)	239, 495, 1172
AloI	GAACNNNNNNTCC	2 cut(s)	95, 127
AluBI	AGCT	7 cut(s)	51, 190, 199, 722, 1130, 1157, 1715
AluI	AGCT	7 cut(s)	51, 190, 199, 722, 1130, 1157, 1715
Alw21I	GWGCWC	2 cut(s)	192, 1159
Alw26I	GTCTC	2 cut(s)	361, 1623
AlwI	GGATC	2 cut(s)	583, 596
Ama87I	CYCGRG	2 cut(s)	14, 901
Aor51HI	AGCGCT	1 cut(s)	230
AoxI	GGCC	3 cut(s)	333, 480, 879
ApeKI	GCWGC	3 cut(s)	231, 830, 1016
ApoI	RAATTY	1 cut(s)	781
ArsI	GACNNNNNNTTYG	2 cut(s)	766, 798
AseI	ATTAAT	1 cut(s)	1599
AsiGI	ACCGGT	1 cut(s)	913
Asp718I	GGTACC	1 cut(s)	787
AspLEI	GCGC	3 cut(s)	231, 272, 1082
AspS9I	GGNCC	4 cut(s)	154, 329, 628, 1384
AsuC2I	CCSGG	3 cut(s)	484, 593, 1538
AsuHPI	GGTGA	4 cut(s)	229, 1161, 1181, 1709
AvaI	CYCGRG	2 cut(s)	14, 901
AvaII	GGWCC	4 cut(s)	154, 329, 628, 1384
AxyI	CCTNAGG	1 cut(s)	1545
BamHI	GGATCC	1 cut(s)	588
BanI	GGYRCC	2 cut(s)	269, 787
BanII	GRGCYC	3 cut(s)	192, 525, 1159
BbsI	GAAGAC	3 cut(s)	30, 531, 1279
Bbv12I	GWGCWC	2 cut(s)	192, 1159
BbvI	GCAGC	3 cut(s)	218, 817, 1003
BccI	CCATC	4 cut(s)	57, 605, 958, 1510
BceAI	ACGGC	3 cut(s)	257, 338, 389
BcgI	CGANNNNNNTGC	6 cut(s)	812, 846, 851, 885, 995, 1029
BciT130I	CCWGG	3 cut(s)	241, 497, 1174
BclI	TGATCA	2 cut(s)	297, 732
BcnI	CCSGG	3 cut(s)	484, 593, 1538
BcoDI	GTCTC	2 cut(s)	361, 1623
BcuI	ACTAGT	2 cut(s)	1262, 1763
BfaI	CTAG	5 cut(s)	684, 723, 1131, 1263, 1764
BfmI	CTRYAG	3 cut(s)	1326, 1425, 1659
BfoI	RGCGCY	2 cut(s)	232, 273
BglI	GCCNNNNNGGC	3 cut(s)	332, 878, 887
BisI	GCNGC	5 cut(s)	232, 480, 828, 831, 1017
BlsI	GCNGC	5 cut(s)	233, 481, 829, 832, 1018
Bme1390I	CCNGG	6 cut(s)	241, 484, 497, 593, 1174, 1538
Bme18I	GGWCC	4 cut(s)	154, 329, 628, 1384
BmeT110I	CYCGRG	2 cut(s)	14, 901
BmgT120I	GGNCC	4 cut(s)	154, 329, 628, 1384
BmiI	GGNNCC	7 cut(s)	271, 590, 630, 789, 1204, 1542, 1560
BmrFI	CCNGG	6 cut(s)	241, 484, 497, 593, 1174, 1538
BmrI	ACTGGG	2 cut(s)	312, 410
BmsI	GCATC	3 cut(s)	975, 1003, 1446
BmuI	ACTGGG	2 cut(s)	312, 410
BoxI	GACNNNNGTC	1 cut(s)	327
BpiI	GAAGAC	3 cut(s)	30, 531, 1279
BpmI	CTGGAG	3 cut(s)	76, 179, 518
BpuEI	CTTGAG	4 cut(s)	134, 1070, 1660, 1728
BpuMI	CCSGG	3 cut(s)	484, 593, 1538
Bsa29I	ATCGAT	1 cut(s)	1005
BsaBI	GATNNNNATC	1 cut(s)	9
BsaHI	GRCGYC	3 cut(s)	123, 270, 324
BsaI	GGTCTC	1 cut(s)	1623
BsaJI	CCNNGG	3 cut(s)	882, 1172, 1571
BsaWI	WCCGGW	1 cut(s)	913
BsaXI	ACNNNNNCTCC	6 cut(s)	113, 125, 143, 155, 158, 188
Bsc4I	CCNNNNNNNGG	4 cut(s)	151, 422, 805, 1199
Bse118I	RCCGGY	3 cut(s)	326, 422, 913
Bse1I	ACTGG	7 cut(s)	59, 307, 416, 848, 859, 1204, 1387
Bse21I	CCTNAGG	1 cut(s)	1545
Bse3DI	GCAATG	4 cut(s)	474, 678, 1331, 1520
Bse8I	GATNNNNATC	1 cut(s)	9
BseBI	CCWGG	3 cut(s)	241, 497, 1174
BseCI	ATCGAT	1 cut(s)	1005
BseDI	CCNNGG	3 cut(s)	882, 1172, 1571
BseGI	GGATG	6 cut(s)	10, 1053, 1276, 1366, 1461, 1521
BseJI	GATNNNNATC	1 cut(s)	9
BseLI	CCNNNNNNNGG	4 cut(s)	151, 422, 805, 1199
BseMI	GCAATG	4 cut(s)	474, 678, 1331, 1520
BseMII	CTCAG	3 cut(s)	768, 960, 1157
BseNI	ACTGG	7 cut(s)	59, 307, 416, 848, 859, 1204, 1387
BseRI	GAGGAG	4 cut(s)	152, 163, 182, 899
BseX3I	CGGCCG	1 cut(s)	480
BseXI	GCAGC	3 cut(s)	218, 817, 1003
BsgI	GTGCAG	1 cut(s)	1263
Bsh1236I	CGCG	1 cut(s)	318
Bsh1285I	CGRYCG	1 cut(s)	483
BshFI	GGCC	3 cut(s)	335, 482, 881
BshNI	GGYRCC	2 cut(s)	269, 787
BshTI	ACCGGT	1 cut(s)	913
BshVI	ATCGAT	1 cut(s)	1005
BsiEI	CGRYCG	1 cut(s)	483
BsiHKAI	GWGCWC	2 cut(s)	192, 1159
BsiHKCI	CYCGRG	2 cut(s)	14, 901
BsiSI	CCGG	7 cut(s)	327, 332, 423, 483, 592, 914, 1537
BslFI	GGGAC	5 cut(s)	260, 398, 473, 920, 1519
BslI	CCNNNNNNNGG	4 cut(s)	151, 422, 805, 1199
BsmAI	GTCTC	2 cut(s)	361, 1623
BsmBI	CGTCTC	1 cut(s)	361
BsmFI	GGGAC	5 cut(s)	260, 398, 473, 920, 1519
BsmI	GAATGC	1 cut(s)	1634
BsnI	GGCC	3 cut(s)	335, 482, 881
Bso31I	GGTCTC	1 cut(s)	1623
BsoBI	CYCGRG	2 cut(s)	14, 901
Bsp1286I	GDGCHC	3 cut(s)	192, 525, 1159
Bsp1407I	TGTACA	1 cut(s)	1693
Bsp143I	GATC	4 cut(s)	297, 588, 732, 942
Bsp19I	CCATGG	1 cut(s)	1571
BspACI	CCGC	8 cut(s)	145, 157, 169, 316, 426, 479, 827, 1345
BspANI	GGCC	3 cut(s)	335, 482, 881
BspCNI	CTCAG	3 cut(s)	769, 959, 1156
BspDI	ATCGAT	1 cut(s)	1005
BspFNI	CGCG	1 cut(s)	318
BspLI	GGNNCC	7 cut(s)	271, 590, 630, 789, 1204, 1542, 1560
BspMAI	CTGCAG	1 cut(s)	1663
BspPI	GGATC	2 cut(s)	583, 596
BspT107I	GGYRCC	2 cut(s)	269, 787
BspTNI	GGTCTC	1 cut(s)	1623
BsrBI	CCGCTC	1 cut(s)	171
BsrDI	GCAATG	4 cut(s)	474, 678, 1331, 1520
BsrFI	RCCGGY	3 cut(s)	326, 422, 913
BsrGI	TGTACA	1 cut(s)	1693
BsrI	ACTGG	7 cut(s)	59, 307, 416, 848, 859, 1204, 1387
BssAI	RCCGGY	3 cut(s)	326, 422, 913
BssECI	CCNNGG	3 cut(s)	882, 1172, 1571
BssMI	GATC	4 cut(s)	297, 588, 732, 942
BssNAI	GTATAC	1 cut(s)	1137
BssNI	GRCGYC	3 cut(s)	123, 270, 324
BssT1I	CCWWGG	1 cut(s)	1571
Bst1107I	GTATAC	1 cut(s)	1137
Bst2UI	CCWGG	3 cut(s)	241, 497, 1174
Bst4CI	ACNGT	2 cut(s)	1222, 1285
BstACI	GRCGYC	3 cut(s)	123, 270, 324
BstAPI	GCANNNNNTGC	1 cut(s)	1250
BstAUI	TGTACA	1 cut(s)	1693
BstC8I	GCNNGC	7 cut(s)	71, 309, 424, 553, 1106, 1128, 1581
BstDEI	CTNAG	6 cut(s)	777, 946, 1059, 1143, 1234, 1545
BstDSI	CCRYGG	1 cut(s)	1571
BstEII	GGTNACC	1 cut(s)	1228
BstF5I	GGATG	6 cut(s)	10, 1053, 1276, 1366, 1461, 1521
BstFNI	CGCG	1 cut(s)	318
BstH2I	RGCGCY	2 cut(s)	232, 273
BstHHI	GCGC	3 cut(s)	231, 272, 1082
BstKTI	GATC	4 cut(s)	300, 591, 735, 945
BstMAI	GTCTC	2 cut(s)	361, 1623
BstMBI	GATC	4 cut(s)	297, 588, 732, 942
BstMCI	CGRYCG	1 cut(s)	483
BstNI	CCWGG	3 cut(s)	241, 497, 1174
BstPAI	GACNNNNGTC	1 cut(s)	327
BstPI	GGTNACC	1 cut(s)	1228
BstSCI	CCNGG	6 cut(s)	239, 482, 495, 591, 1172, 1536
BstSFI	CTRYAG	3 cut(s)	1326, 1425, 1659
BstUI	CGCG	1 cut(s)	318
BstV1I	GCAGC	3 cut(s)	218, 817, 1003
BstV2I	GAAGAC	3 cut(s)	30, 531, 1279
BstX2I	RGATCY	1 cut(s)	588
BstYI	RGATCY	1 cut(s)	588
BstZ17I	GTATAC	1 cut(s)	1137
BstZI	CGGCCG	1 cut(s)	480
Bsu15I	ATCGAT	1 cut(s)	1005
Bsu36I	CCTNAGG	1 cut(s)	1545
BsuRI	GGCC	3 cut(s)	335, 482, 881
BsuTUI	ATCGAT	1 cut(s)	1005
BtgI	CCRYGG	1 cut(s)	1571
BtgZI	GCGATG	1 cut(s)	333
BtsCI	GGATG	6 cut(s)	10, 1053, 1276, 1366, 1461, 1521
BtsI	GCAGTG	1 cut(s)	1656
BtsIMutI	CAGTG	4 cut(s)	300, 954, 1246, 1656
Cac8I	GCNNGC	7 cut(s)	71, 309, 424, 553, 1106, 1128, 1581
CfoI	GCGC	3 cut(s)	231, 272, 1082
Cfr10I	RCCGGY	3 cut(s)	326, 422, 913
Cfr13I	GGNCC	4 cut(s)	154, 329, 628, 1384
ClaI	ATCGAT	1 cut(s)	1005
CpoI	CGGWCCG	1 cut(s)	329
CseI	GACGC	2 cut(s)	131, 332
CsiI	ACCWGGT	1 cut(s)	239
Csp6I	GTAC	6 cut(s)	439, 788, 841, 1063, 1299, 1694
CspAI	ACCGGT	1 cut(s)	913
CspCI	CAANNNNNGTGG	2 cut(s)	1129, 1164
CspI	CGGWCCG	1 cut(s)	329
CviAII	CATG	3 cut(s)	865, 1572, 1666
CviQI	GTAC	6 cut(s)	439, 788, 841, 1063, 1299, 1694
DdeI	CTNAG	6 cut(s)	777, 946, 1059, 1143, 1234, 1545
DinI	GGCGCC	1 cut(s)	271
DpnI	GATC	4 cut(s)	299, 590, 734, 944
DpnII	GATC	4 cut(s)	297, 588, 732, 942
DraIII	CACNNNGTG	1 cut(s)	243
EaeI	YGGCCR	3 cut(s)	333, 480, 879
EagI	CGGCCG	1 cut(s)	480
Ecl136II	GAGCTC	2 cut(s)	190, 1157
EclXI	CGGCCG	1 cut(s)	480
Eco130I	CCWWGG	1 cut(s)	1571
Eco24I	GRGCYC	3 cut(s)	192, 525, 1159
Eco31I	GGTCTC	1 cut(s)	1623
Eco47I	GGWCC	4 cut(s)	154, 329, 628, 1384
Eco47III	AGCGCT	1 cut(s)	230
Eco52I	CGGCCG	1 cut(s)	480
Eco53kI	GAGCTC	2 cut(s)	190, 1157
Eco57I	CTGAAG	1 cut(s)	1279
Eco81I	CCTNAGG	1 cut(s)	1545
Eco88I	CYCGRG	2 cut(s)	14, 901
Eco91I	GGTNACC	1 cut(s)	1228
EcoICRI	GAGCTC	2 cut(s)	190, 1157
EcoO65I	GGTNACC	1 cut(s)	1228
EcoRII	CCWGG	3 cut(s)	239, 495, 1172
EcoT14I	CCWWGG	1 cut(s)	1571
EcoT38I	GRGCYC	3 cut(s)	192, 525, 1159
EgeI	GGCGCC	1 cut(s)	271
EheI	GGCGCC	1 cut(s)	271
ErhI	CCWWGG	1 cut(s)	1571
Esp3I	CGTCTC	1 cut(s)	361
FaeI	CATG	3 cut(s)	868, 1575, 1669
FalI	AAGNNNNNCTT	2 cut(s)	62, 94
FaqI	GGGAC	5 cut(s)	260, 398, 473, 920, 1519
FatI	CATG	3 cut(s)	864, 1571, 1665
FauI	CCCGC	3 cut(s)	152, 323, 419
FauNDI	CATATG	3 cut(s)	802, 1161, 1705
FbaI	TGATCA	2 cut(s)	297, 732
FblI	GTMKAC	1 cut(s)	1136
Fnu4HI	GCNGC	5 cut(s)	232, 480, 828, 831, 1017
FokI	GGATG	5 cut(s)	1060, 1283, 1373, 1468, 1528
FriOI	GRGCYC	3 cut(s)	192, 525, 1159
Fsp4HI	GCNGC	5 cut(s)	232, 480, 828, 831, 1017
FspBI	CTAG	5 cut(s)	684, 723, 1131, 1263, 1764
GlaI	GCGC	3 cut(s)	230, 271, 1081
GluI	GCNGC	5 cut(s)	232, 480, 828, 831, 1017
GsuI	CTGGAG	3 cut(s)	76, 179, 518
HaeII	RGCGCY	2 cut(s)	232, 273
HaeIII	GGCC	3 cut(s)	335, 482, 881
HapII	CCGG	7 cut(s)	327, 332, 423, 483, 592, 914, 1537
HgaI	GACGC	2 cut(s)	131, 332
HhaI	GCGC	3 cut(s)	231, 272, 1082
Hin1I	GRCGYC	3 cut(s)	123, 270, 324
Hin1II	CATG	3 cut(s)	868, 1575, 1669
Hin6I	GCGC	3 cut(s)	229, 270, 1080
HinP1I	GCGC	3 cut(s)	229, 270, 1080
HincII	GTYRAC	1 cut(s)	1281
HindII	GTYRAC	1 cut(s)	1281
HinfI	GANTC	3 cut(s)	35, 179, 217
HpaII	CCGG	7 cut(s)	327, 332, 423, 483, 592, 914, 1537
HphI	GGTGA	4 cut(s)	229, 1161, 1181, 1709
Hpy166II	GTNNAC	6 cut(s)	841, 1137, 1189, 1281, 1694, 1696
Hpy188I	TCNGA	6 cut(s)	178, 447, 527, 564, 588, 1146
Hpy188III	TCNNGA	6 cut(s)	14, 100, 295, 1268, 1639, 1745
Hpy8I	GTNNAC	6 cut(s)	841, 1137, 1189, 1281, 1694, 1696
Hpy99I	CGWCG	2 cut(s)	278, 410
HpyAV	CCTTC	4 cut(s)	193, 452, 522, 1303
HpyCH4III	ACNGT	2 cut(s)	1222, 1285
HpyF3I	CTNAG	6 cut(s)	777, 946, 1059, 1143, 1234, 1545
Hsp92I	GRCGYC	3 cut(s)	123, 270, 324
Hsp92II	CATG	3 cut(s)	868, 1575, 1669
HspAI	GCGC	3 cut(s)	229, 270, 1080
KasI	GGCGCC	1 cut(s)	269
KpnI	GGTACC	1 cut(s)	791
KroI	GCCGGC	1 cut(s)	422
KroNI	GCCGGC	1 cut(s)	424
Ksp22I	TGATCA	2 cut(s)	297, 732
Kzo9I	GATC	4 cut(s)	297, 588, 732, 942
LmnI	GCTCC	5 cut(s)	57, 66, 176, 195, 204
Lsp1109I	GCAGC	3 cut(s)	218, 817, 1003
LweI	GCATC	3 cut(s)	975, 1003, 1446
MabI	ACCWGGT	1 cut(s)	239
MaeI	CTAG	5 cut(s)	684, 723, 1131, 1263, 1764
MaeIII	GTNAC	2 cut(s)	1228, 1363
MalI	GATC	4 cut(s)	299, 590, 734, 944
MbiI	CCGCTC	1 cut(s)	171
MboI	GATC	4 cut(s)	297, 588, 732, 942
MboII	GAAGA	6 cut(s)	35, 73, 531, 575, 1279, 1413
MfeI	CAATTG	2 cut(s)	633, 1041
MflI	RGATCY	1 cut(s)	588
MhlI	GDGCHC	3 cut(s)	192, 525, 1159
MluCI	AATT	8 cut(s)	109, 452, 633, 703, 781, 1041, 1051, 1431
Mly113I	GGCGCC	1 cut(s)	270
MlyI	GAGTC	2 cut(s)	29, 173
MmeI	TCCRAC	1 cut(s)	201
MroNI	GCCGGC	1 cut(s)	422
MseI	TTAA	7 cut(s)	251, 618, 765, 1356, 1409, 1599, 1768
MslI	CAYNNNNRTG	2 cut(s)	293, 1313
MspI	CCGG	7 cut(s)	327, 332, 423, 483, 592, 914, 1537
MspR9I	CCNGG	6 cut(s)	241, 484, 497, 593, 1174, 1538
MunI	CAATTG	2 cut(s)	633, 1041
Mva1269I	GAATGC	1 cut(s)	1634
MvaI	CCWGG	3 cut(s)	241, 497, 1174
MvnI	CGCG	1 cut(s)	318
NaeI	GCCGGC	1 cut(s)	424
NarI	GGCGCC	1 cut(s)	270
NciI	CCSGG	3 cut(s)	484, 593, 1538
NcoI	CCATGG	1 cut(s)	1571
NdeI	CATATG	3 cut(s)	802, 1161, 1705
NdeII	GATC	4 cut(s)	297, 588, 732, 942
NgoMIV	GCCGGC	1 cut(s)	422
NlaIII	CATG	3 cut(s)	868, 1575, 1669
NlaIV	GGNNCC	7 cut(s)	271, 590, 630, 789, 1204, 1542, 1560
NmeAIII	GCCGAG	2 cut(s)	240, 907
NmuCI	GTSAC	1 cut(s)	1363
PaeR7I	CTCGAG	1 cut(s)	901
PcsI	WCGNNNNNNNCGW	1 cut(s)	273
PctI	GAATGC	1 cut(s)	1634
PdiI	GCCGGC	1 cut(s)	424
PfeI	GAWTC	1 cut(s)	217
PflMI	CCANNNNNTGG	1 cut(s)	1199
PfoI	TCCNGGA	1 cut(s)	495
PinAI	ACCGGT	1 cut(s)	913
PkrI	GCNGC	5 cut(s)	233, 481, 829, 832, 1018
PleI	GAGTC	2 cut(s)	29, 173
PluTI	GGCGCC	1 cut(s)	273
PpsI	GAGTC	2 cut(s)	29, 173
PshAI	GACNNNNGTC	1 cut(s)	327
PshBI	ATTAAT	1 cut(s)	1599
Psp124BI	GAGCTC	2 cut(s)	192, 1159
Psp6I	CCWGG	3 cut(s)	239, 495, 1172
PspEI	GGTNACC	1 cut(s)	1228
PspGI	CCWGG	3 cut(s)	239, 495, 1172
PspN4I	GGNNCC	7 cut(s)	271, 590, 630, 789, 1204, 1542, 1560
PspPI	GGNCC	4 cut(s)	154, 329, 628, 1384
PspXI	VCTCGAGB	1 cut(s)	901
PstI	CTGCAG	1 cut(s)	1663
PsuI	RGATCY	1 cut(s)	588
RsaI	GTAC	6 cut(s)	440, 789, 842, 1064, 1300, 1695
RsaNI	GTAC	6 cut(s)	439, 788, 841, 1063, 1299, 1694
RseI	CAYNNNNRTG	2 cut(s)	293, 1313
Rsr2I	CGGWCCG	1 cut(s)	329
RsrII	CGGWCCG	1 cut(s)	329
SacI	GAGCTC	2 cut(s)	192, 1159
SaqAI	TTAA	7 cut(s)	251, 618, 765, 1356, 1409, 1599, 1768
SatI	GCNGC	5 cut(s)	232, 480, 828, 831, 1017
Sau3AI	GATC	4 cut(s)	297, 588, 732, 942
Sau96I	GGNCC	4 cut(s)	154, 329, 628, 1384
SchI	GAGTC	2 cut(s)	29, 173
ScrFI	CCNGG	6 cut(s)	241, 484, 497, 593, 1174, 1538
SduI	GDGCHC	3 cut(s)	192, 525, 1159
SexAI	ACCWGGT	1 cut(s)	239
SfaNI	GCATC	3 cut(s)	975, 1003, 1446
SfcI	CTRYAG	3 cut(s)	1326, 1425, 1659
SfoI	GGCGCC	1 cut(s)	271
Sfr274I	CTCGAG	1 cut(s)	901
SinI	GGWCC	4 cut(s)	154, 329, 628, 1384
SlaI	CTCGAG	1 cut(s)	901
SmiMI	CAYNNNNRTG	2 cut(s)	293, 1313
SmlI	CTYRAG	5 cut(s)	149, 901, 1085, 1639, 1743
SmoI	CTYRAG	5 cut(s)	149, 901, 1085, 1639, 1743
SpeI	ACTAGT	2 cut(s)	1262, 1763
Sse9I	AATT	8 cut(s)	109, 452, 633, 703, 781, 1041, 1051, 1431
SsiI	CCGC	8 cut(s)	145, 157, 169, 316, 426, 479, 827, 1345
SspDI	GGCGCC	1 cut(s)	269
SspMI	CTAG	5 cut(s)	684, 723, 1131, 1263, 1764
SstI	GAGCTC	2 cut(s)	192, 1159
StyD4I	CCNGG	6 cut(s)	239, 482, 495, 591, 1172, 1536
StyI	CCWWGG	1 cut(s)	1571
TaaI	ACNGT	2 cut(s)	1222, 1285
TaqI	TCGA	7 cut(s)	186, 408, 822, 861, 902, 1005, 1589
TasI	AATT	8 cut(s)	109, 452, 633, 703, 781, 1041, 1051, 1431
TatI	WGTACW	3 cut(s)	840, 1062, 1693
TauI	GCSGC	2 cut(s)	482, 830
TfiI	GAWTC	1 cut(s)	217
Tru1I	TTAA	7 cut(s)	251, 618, 765, 1356, 1409, 1599, 1768
Tru9I	TTAA	7 cut(s)	251, 618, 765, 1356, 1409, 1599, 1768
TscAI	CASTG	4 cut(s)	307, 954, 1246, 1663
TseFI	GTSAC	1 cut(s)	1363
TseI	GCWGC	3 cut(s)	231, 830, 1016
Tsp45I	GTSAC	1 cut(s)	1363
TspDTI	ATGAA	5 cut(s)	239, 463, 1064, 1639, 1770
TspGWI	ACGGA	1 cut(s)	410
TspRI	CASTG	4 cut(s)	307, 954, 1246, 1663
Van91I	CCANNNNNTGG	1 cut(s)	1199
VpaK11BI	GGWCC	4 cut(s)	154, 329, 628, 1384
VspI	ATTAAT	1 cut(s)	1599
XapI	RAATTY	1 cut(s)	781
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1569
XhoI	CTCGAG	1 cut(s)	901
XmiI	GTMKAC	1 cut(s)	1136
XspI	CTAG	5 cut(s)	684, 723, 1131, 1263, 1764

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.