Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr10

Orthogroup ID

OG0010470

Physical Location & Seq

Genomic Coordinates Forward (+)

23701787 .. 23707598

Gene Structure 5812 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1854 bp

ATGGAGGACTCAGACGGAGGCCTCAACTTCGACTTCGAGGGAGGTCTCGATGCACCCGCCACCGTCTCCGCCTCCGCGGGCCCCTCAGGCGATGCCTGTGGGTTCCTCCACCAATACGACAAGTCGCGCATGCCCGTGTGCCGCTTCTTCCGGTTGTACGGCGAGTGCCGCGAGCAGGACTGCGTGTACAAGCACACTAACGAGGACATCAAAGAGTGTAATATGTACAAGTTGGGTTTTTGTCCAAATGGTCCTGATTGCCGGTATAGACACGCAAAGCTGCCTGGACCTCCACCTCCAGTGGAAGAAGTCCTTCAGAAGATCCAGCATTTGACTTCTTACAATTACAACAACTCAAATAAGTTCTATCAACAAAGGAATGCTGGTTTTCCCCAACAAGGAGATAAGTATCAGCCTGCACAAGGACCCAACAATTTTGTGGGAAAACCTACTACGGCAGAGTCTGGGAATGTCCAGCAGCAGCAACAGCAACCGCAACAGCTTCAACAAACCCAACAACATGTTGGCCCTGCAGTCGCACAGACACAAAATCTTCCCAATGGCTTAGCTAATCAGGCAAATAGAAGCGCGTTGCCTTTACCTCAAGGAACATCTAGGTATTTTATTGTTAAAAGTTGCAACCGAGAAAATTTGGAATTATCTGTACAACAAGGATTATGGGCAACTCAGAGGAGCAACGAGTCCAAACTTAATGAAGCTTTTGACTCTGCTGAAAATGTGATTTTAATTTTCTCAGTCAACCGGACTCGACATTTCCAGGGTTGTGCAAAGATGATGTCCAGAATTGGTGGGTCTGTTGGTGGAGGGAATTGGAAATATGCACACGGAACCGCGCATTATGGGCGAAATTTCTCTGTCAAATGGTTAAAGCTATGTGAACTGTCCTTTCACAAAACTCGTCATTTGAGGAACCCCTACAATGAGAACCTACCAGTGAAGATAAGTAGAGATTGTCAAGAGCTAGAGCTCTCCGTCGGTGAGCAGTTGGCGTCCTTGCTTTATCTTGAGCCAGATAGTGAACTTATGGAAATTTCGATTGCGGCAGAATCAAAACGCGAAGAAGAAAAAGCAAAGGGAGTCAATCCAGAGAATGGTGGTGAGAATCCAGACATTGTCCCATTTGAGGACAATGAAGAGGAGGAAGAAGAAGAAAGTGAAGATGAGGAAGATAGCTTCGGTCAAGTTCCTGGAGCAGGAAATGATGGCAGAGGAAGGGGCAGAGGAGGAGGAGTCATGTGGCCTCCTCACATGGCTCTACCAAGGGGTGGCAGACCTATGCCCGGGATGCAGGGTTTTCCCCCAGGAATGATGGGTCCTGATGCGATGCCCTATGGACCTGACGGATTTGTAATGCCAAATCCGTTTGGTATGGGGCCTCGGGGTTTCAATCCGTATGGTCCCAGGTTTTCAGGTGATTTTACAGGGCCCAACCCTGGCATGATGTTTCGTGGGAGACCACAACAACCTGGATTTCCACCCGGTGGGTTTGGGATCATGGGTCCTGGACGTGCACCATTTATGGGAGGGATACATCCAGGCCGAGGTGGTCGGCCAGCAGGTATGTCTCCCATGTTTCCACCACCCCCACCACCATCATCTCAAAACCCTAACCGGATGCCGAAGAGAGATCCAAGGGGAGCTTCCACTGATCGGAAGGGACAAGATATGTCAGGTCCGGCTGGTGGACCAGATGATGAGACACAGTATGGCGCTGGAAACAACTCTAGACATGATGATAGCGAAAGTGAGGATGAGGCCCCGAGGCGGTCGAGGCATGGAGATGGAAGGAAGAAACGGCGAGACTCGGAAGGAGATGCGACCTCCGAGCACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002682 GO:0002684 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003824 GO:0004518 GO:0004519 GO:0004521 GO:0004540 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005847 GO:0005849 GO:0006139 GO:0006378 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0006950 GO:0006979 GO:0008150 GO:0008152 GO:0009966 GO:0009987 GO:0010363 GO:0010467 GO:0010468 GO:0010646 GO:0010941 GO:0010942 GO:0016070 GO:0016071 GO:0016787 GO:0016788 GO:0019219 GO:0019222 GO:0023051 GO:0031123 GO:0031124 GO:0031323 GO:0031347 GO:0031349 GO:0031440 GO:0031974 GO:0031981 GO:0032991 GO:0034052 GO:0034641 GO:0043067 GO:0043068 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043631 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045088 GO:0045089 GO:0046483 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050684 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0080090 GO:0080134 GO:0080135 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0097159 GO:0140098 GO:1900363 GO:1901360 GO:1901363 GO:1903311 GO:2000031 GO:2001023 GO:2001038

KEGG Pathways

Metabolic & Signaling

ko03015 ko05164 map03015 map05164

Pfam Domains

Protein Families

YTH

Protein Analysis

618

Amino Acids

67.73

Weight (kDa)

5.83

Isoelectric Point (pI)

58.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
YTH	PF04146	205 - 339	1.2e-46	YT521-B-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0010470)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G30460 AT1G30460 AT1G30460
fragaria_vesca	FvH4_3g09980
malus_domestica	MD05G1274200.v1.1 MD10G1253900.v1.1
prunus_persica	Prupe.4G089500_v2.0.a1
pyrus_communis	pycom05g25560 pycom10g20950
rosa_chinensis	RchiOBHm_Chr5g0015731 RchiOBHm_Chr5g0015861
rosa_laevigata	RLG00000032226
rosa_multiflora	Rmu_sc0000012.1_g000002
rosa_roxburghii	Rroxscaffold_1G00060740
rosa_rugosa	Rorug05G0029600
rosa_samantha	Rh5AG123200 Rh5BG122100 Rh5CG132200 Rh5CG133300 Rh5DG121500
rosa_wichuraiana	Rw5G010630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1568
AccB7I	CCANNNNNTGG	3 cut(s)	1112, 1286, 1502
AccII	CGCG	6 cut(s)	77, 127, 171, 590, 854, 1077
AclWI	GGATC	3 cut(s)	316, 1520, 1643
AcoI	YGGCCR	1 cut(s)	1571
AcsI	RAATTY	3 cut(s)	649, 868, 1050
AcuI	CTGAAG	1 cut(s)	299
AcyI	GRCGYC	1 cut(s)	1010
AdeI	CACNNNGTG	1 cut(s)	1502
AfaI	GTAC	4 cut(s)	158, 188, 227, 666
AflIII	ACRYGT	1 cut(s)	520
AgsI	TTSAA	2 cut(s)	506, 1408
AjiI	CACGTC	1 cut(s)	1529
AjnI	CCWGG	9 cut(s)	283, 777, 1207, 1321, 1421, 1453, 1486, 1522, 1555
AjuI	GAANNNNNNNTTGG	2 cut(s)	1645, 1677
AluBI	AGCT	9 cut(s)	280, 502, 569, 719, 892, 982, 988, 1194, 1661
AluI	AGCT	9 cut(s)	280, 502, 569, 719, 892, 982, 988, 1194, 1661
Alw21I	GWGCWC	3 cut(s)	990, 1534, 1851
Alw26I	GTCTC	6 cut(s)	50, 70, 1468, 1590, 1712, 1815
Alw44I	GTGCAC	1 cut(s)	1530
AlwI	GGATC	3 cut(s)	316, 1520, 1643
AlwNI	CAGNNNCTG	1 cut(s)	464
Ama87I	CYCGRG	3 cut(s)	1301, 1398, 1780
AoxI	GGCC	9 cut(s)	19, 79, 526, 1259, 1394, 1445, 1558, 1571, 1776
ApaI	GGGCCC	2 cut(s)	83, 1449
ApaLI	GTGCAC	1 cut(s)	1530
ApeKI	GCWGC	3 cut(s)	280, 478, 481
ApoI	RAATTY	3 cut(s)	649, 868, 1050
ArsI	GACNNNNNNTTYG	2 cut(s)	782, 814
Asp700I	GAANNNNTTC	1 cut(s)	312
AspLEI	GCGC	4 cut(s)	129, 590, 856, 1733
AsuC2I	CCSGG	3 cut(s)	1302, 1303, 1500
AsuHPI	GGTGA	3 cut(s)	1010, 1130, 1445
AvaI	CYCGRG	3 cut(s)	1301, 1398, 1780
AvaII	GGWCC	9 cut(s)	251, 287, 425, 1334, 1355, 1418, 1520, 1694, 1706
AxyI	CCTNAGG	1 cut(s)	85
BaeGI	GKGCMC	3 cut(s)	83, 1449, 1534
BanII	GRGCYC	3 cut(s)	83, 990, 1449
Bbv12I	GWGCWC	3 cut(s)	990, 1534, 1851
BbvI	GCAGC	3 cut(s)	267, 490, 493
BccI	CCATC	4 cut(s)	1217, 1324, 1621, 1796
BceAI	ACGGC	3 cut(s)	175, 471, 1832
BciT130I	CCWGG	9 cut(s)	285, 779, 1209, 1323, 1423, 1455, 1488, 1524, 1557
BciVI	GTATCC	1 cut(s)	1542
BcnI	CCSGG	3 cut(s)	1302, 1303, 1500
BcoDI	GTCTC	6 cut(s)	50, 70, 1468, 1590, 1712, 1815
BfaI	CTAG	4 cut(s)	615, 983, 1746, 1852
BfmI	CTRYAG	1 cut(s)	531
BfoI	RGCGCY	1 cut(s)	1734
BfuAI	ACCTGC	1 cut(s)	1568
BfuI	GTATCC	1 cut(s)	1542
BglI	GCCNNNNNGGC	1 cut(s)	87
BisI	GCNGC	6 cut(s)	142, 169, 281, 479, 482, 1062
BlpI	GCTNAGC	1 cut(s)	565
BlsI	GCNGC	6 cut(s)	143, 170, 282, 480, 483, 1063
Bme18I	GGWCC	9 cut(s)	251, 287, 425, 1334, 1355, 1418, 1520, 1694, 1706
BmeT110I	CYCGRG	3 cut(s)	1301, 1398, 1780
BmgBI	CACGTC	1 cut(s)	1529
BmsI	GCATC	7 cut(s)	40, 82, 1296, 1330, 1335, 1626, 1825
BpmI	CTGGAG	2 cut(s)	282, 1230
Bpu1102I	GCTNAGC	1 cut(s)	565
BpuEI	CTTGAG	2 cut(s)	588, 1046
BpuMI	CCSGG	3 cut(s)	1302, 1303, 1500
BsaBI	GATNNNNATC	1 cut(s)	408
BsaHI	GRCGYC	1 cut(s)	1010
BsaI	GGTCTC	2 cut(s)	50, 1468
BsaWI	WCCGGW	3 cut(s)	150, 762, 1632
BsaXI	ACNNNNNCTCC	2 cut(s)	1236, 1266
Bse118I	RCCGGY	1 cut(s)	261
Bse1I	ACTGG	2 cut(s)	299, 953
Bse21I	CCTNAGG	1 cut(s)	85
Bse8I	GATNNNNATC	1 cut(s)	408
BseBI	CCWGG	9 cut(s)	285, 779, 1209, 1323, 1423, 1455, 1488, 1524, 1557
BseGI	GGATG	4 cut(s)	1311, 1552, 1641, 1777
BseJI	GATNNNNATC	1 cut(s)	408
BseMII	CTCAG	4 cut(s)	24, 99, 701, 768
BseNI	ACTGG	2 cut(s)	299, 953
BseRI	GAGGAG	6 cut(s)	706, 1172, 1254, 1257, 1260, 1263
BseSI	GKGCMC	3 cut(s)	83, 1449, 1534
BseXI	GCAGC	3 cut(s)	267, 490, 493
BsgI	GTGCAG	1 cut(s)	402
Bsh1236I	CGCG	6 cut(s)	77, 127, 171, 590, 854, 1077
Bsh1285I	CGRYCG	1 cut(s)	1790
BshFI	GGCC	9 cut(s)	21, 81, 528, 1261, 1396, 1447, 1560, 1573, 1778
BsiEI	CGRYCG	1 cut(s)	1790
BsiHKAI	GWGCWC	3 cut(s)	990, 1534, 1851
BsiHKCI	CYCGRG	3 cut(s)	1301, 1398, 1780
BsiSI	CCGG	7 cut(s)	151, 262, 763, 1302, 1500, 1633, 1697
BslFI	GGGAC	3 cut(s)	1121, 1404, 1692
BsmAI	GTCTC	6 cut(s)	50, 70, 1468, 1590, 1712, 1815
BsmBI	CGTCTC	1 cut(s)	70
BsmFI	GGGAC	3 cut(s)	1121, 1404, 1692
BsmI	GAATGC	1 cut(s)	385
BsnI	GGCC	9 cut(s)	21, 81, 528, 1261, 1396, 1447, 1560, 1573, 1778
Bso31I	GGTCTC	2 cut(s)	50, 1468
BsoBI	CYCGRG	3 cut(s)	1301, 1398, 1780
Bsp120I	GGGCCC	2 cut(s)	79, 1445
Bsp1286I	GDGCHC	5 cut(s)	83, 990, 1449, 1534, 1851
Bsp1407I	TGTACA	3 cut(s)	186, 225, 664
Bsp143I	GATC	4 cut(s)	321, 1512, 1648, 1669
Bsp1720I	GCTNAGC	1 cut(s)	565
BspANI	GGCC	9 cut(s)	21, 81, 528, 1261, 1396, 1447, 1560, 1573, 1778
BspCNI	CTCAG	4 cut(s)	23, 98, 700, 767
BspFNI	CGCG	6 cut(s)	77, 127, 171, 590, 854, 1077
BspMAI	CTGCAG	1 cut(s)	535
BspMI	ACCTGC	1 cut(s)	1568
BspPI	GGATC	3 cut(s)	316, 1520, 1643
BspTNI	GGTCTC	2 cut(s)	50, 1468
BsrFI	RCCGGY	1 cut(s)	261
BsrGI	TGTACA	3 cut(s)	186, 225, 664
BsrI	ACTGG	2 cut(s)	299, 953
BssAI	RCCGGY	1 cut(s)	261
BssMI	GATC	4 cut(s)	321, 1512, 1648, 1669
BssNI	GRCGYC	1 cut(s)	1010
BssT1I	CCWWGG	2 cut(s)	1280, 1652
Bst2UI	CCWGG	9 cut(s)	285, 779, 1209, 1323, 1423, 1455, 1488, 1524, 1557
Bst4CI	ACNGT	3 cut(s)	64, 903, 1725
Bst6I	CTCTTC	2 cut(s)	1149, 1637
BstACI	GRCGYC	1 cut(s)	1010
BstAUI	TGTACA	3 cut(s)	186, 225, 664
BstC8I	GCNNGC	5 cut(s)	79, 131, 173, 417, 1575
BstDEI	CTNAG	5 cut(s)	10, 85, 565, 687, 754
BstDSI	CCRYGG	1 cut(s)	75
BstENI	CCTNNNNNAGG	2 cut(s)	420, 1212
BstF5I	GGATG	4 cut(s)	1311, 1552, 1641, 1777
BstFNI	CGCG	6 cut(s)	77, 127, 171, 590, 854, 1077
BstH2I	RGCGCY	1 cut(s)	1734
BstHHI	GCGC	4 cut(s)	129, 590, 856, 1733
BstKTI	GATC	4 cut(s)	324, 1515, 1651, 1672
BstMAI	GTCTC	6 cut(s)	50, 70, 1468, 1590, 1712, 1815
BstMBI	GATC	4 cut(s)	321, 1512, 1648, 1669
BstMCI	CGRYCG	1 cut(s)	1790
BstMWI	GCNNNNNNNGC	7 cut(s)	87, 168, 487, 575, 862, 1306, 1792
BstNI	CCWGG	9 cut(s)	285, 779, 1209, 1323, 1423, 1455, 1488, 1524, 1557
BstNSI	RCATGY	2 cut(s)	133, 524
BstSFI	CTRYAG	1 cut(s)	531
BstSLI	GKGCMC	3 cut(s)	83, 1449, 1534
BstUI	CGCG	6 cut(s)	77, 127, 171, 590, 854, 1077
BstV1I	GCAGC	3 cut(s)	267, 490, 493
BstX2I	RGATCY	2 cut(s)	321, 1648
BstYI	RGATCY	2 cut(s)	321, 1648
Bsu36I	CCTNAGG	1 cut(s)	85
BsuI	GTATCC	1 cut(s)	1542
BsuRI	GGCC	9 cut(s)	21, 81, 528, 1261, 1396, 1447, 1560, 1573, 1778
BtgI	CCRYGG	1 cut(s)	75
BtgZI	GCGATG	2 cut(s)	105, 1358
BtrI	CACGTC	1 cut(s)	1529
BtsCI	GGATG	4 cut(s)	1311, 1552, 1641, 1777
BtsIMutI	CAGTG	3 cut(s)	306, 960, 1665
BveI	ACCTGC	1 cut(s)	1568
Cac8I	GCNNGC	5 cut(s)	79, 131, 173, 417, 1575
CaiI	CAGNNNCTG	1 cut(s)	464
CfoI	GCGC	4 cut(s)	129, 590, 856, 1733
Cfr10I	RCCGGY	1 cut(s)	261
Cfr42I	CCGCGG	1 cut(s)	78
Cfr9I	CCCGGG	1 cut(s)	1301
CseI	GACGC	1 cut(s)	999
Csp6I	GTAC	4 cut(s)	157, 187, 226, 665
CviAII	CATG	9 cut(s)	130, 521, 1255, 1270, 1459, 1516, 1591, 1751, 1796
CviQI	GTAC	4 cut(s)	157, 187, 226, 665
DdeI	CTNAG	5 cut(s)	10, 85, 565, 687, 754
DpnI	GATC	4 cut(s)	323, 1514, 1650, 1671
DpnII	GATC	4 cut(s)	321, 1512, 1648, 1669
DraIII	CACNNNGTG	1 cut(s)	1502
EaeI	YGGCCR	1 cut(s)	1571
Eam1104I	CTCTTC	2 cut(s)	1149, 1637
EarI	CTCTTC	2 cut(s)	1149, 1637
EciI	GGCGGA	1 cut(s)	58
Ecl136II	GAGCTC	1 cut(s)	988
Eco130I	CCWWGG	2 cut(s)	1280, 1652
Eco147I	AGGCCT	1 cut(s)	21
Eco24I	GRGCYC	3 cut(s)	83, 990, 1449
Eco31I	GGTCTC	2 cut(s)	50, 1468
Eco47I	GGWCC	9 cut(s)	251, 287, 425, 1334, 1355, 1418, 1520, 1694, 1706
Eco53kI	GAGCTC	1 cut(s)	988
Eco57I	CTGAAG	1 cut(s)	299
Eco81I	CCTNAGG	1 cut(s)	85
Eco88I	CYCGRG	3 cut(s)	1301, 1398, 1780
EcoICRI	GAGCTC	1 cut(s)	988
EcoNI	CCTNNNNNAGG	2 cut(s)	420, 1212
EcoO109I	RGGNCCY	7 cut(s)	80, 425, 1334, 1394, 1445, 1520, 1777
EcoRII	CCWGG	9 cut(s)	283, 777, 1207, 1321, 1421, 1453, 1486, 1522, 1555
EcoT14I	CCWWGG	2 cut(s)	1280, 1652
EcoT38I	GRGCYC	3 cut(s)	83, 990, 1449
ErhI	CCWWGG	2 cut(s)	1280, 1652
Esp3I	CGTCTC	1 cut(s)	70
FaeI	CATG	9 cut(s)	133, 524, 1258, 1273, 1462, 1519, 1594, 1754, 1799
FalI	AAGNNNNNCTT	4 cut(s)	297, 329, 1645, 1677
FaqI	GGGAC	3 cut(s)	1121, 1404, 1692
FatI	CATG	9 cut(s)	129, 520, 1254, 1269, 1458, 1515, 1590, 1750, 1795
FauI	CCCGC	2 cut(s)	64, 70
Fnu4HI	GCNGC	6 cut(s)	142, 169, 281, 479, 482, 1062
FokI	GGATG	4 cut(s)	1318, 1539, 1648, 1784
FriOI	GRGCYC	3 cut(s)	83, 990, 1449
Fsp4HI	GCNGC	6 cut(s)	142, 169, 281, 479, 482, 1062
FspBI	CTAG	4 cut(s)	615, 983, 1746, 1852
GlaI	GCGC	4 cut(s)	128, 589, 855, 1732
GluI	GCNGC	6 cut(s)	142, 169, 281, 479, 482, 1062
GsuI	CTGGAG	2 cut(s)	282, 1230
HaeII	RGCGCY	1 cut(s)	1734
HaeIII	GGCC	9 cut(s)	21, 81, 528, 1261, 1396, 1447, 1560, 1573, 1778
HapII	CCGG	7 cut(s)	151, 262, 763, 1302, 1500, 1633, 1697
HgaI	GACGC	1 cut(s)	999
HhaI	GCGC	4 cut(s)	129, 590, 856, 1733
Hin1I	GRCGYC	1 cut(s)	1010
Hin1II	CATG	9 cut(s)	133, 524, 1258, 1273, 1462, 1519, 1594, 1754, 1799
Hin6I	GCGC	4 cut(s)	127, 588, 854, 1731
HinP1I	GCGC	4 cut(s)	127, 588, 854, 1731
HincII	GTYRAC	1 cut(s)	760
HindII	GTYRAC	1 cut(s)	760
HindIII	AAGCTT	1 cut(s)	717
HpaII	CCGG	7 cut(s)	151, 262, 763, 1302, 1500, 1633, 1697
HphI	GGTGA	3 cut(s)	1010, 1130, 1445
Hpy166II	GTNNAC	6 cut(s)	187, 760, 899, 1040, 1532, 1706
Hpy188I	TCNGA	6 cut(s)	13, 318, 690, 1674, 1828, 1846
Hpy188III	TCNNGA	9 cut(s)	47, 254, 801, 977, 1025, 1106, 1127, 1337, 1746
Hpy8I	GTNNAC	6 cut(s)	187, 760, 899, 1040, 1532, 1706
Hpy99I	CGWCG	1 cut(s)	998
HpyAV	CCTTC	5 cut(s)	323, 1227, 1669, 1800, 1823
HpyCH4III	ACNGT	3 cut(s)	64, 903, 1725
HpyCH4IV	ACGT	1 cut(s)	1528
HpyCH4V	TGCA	8 cut(s)	53, 419, 533, 639, 788, 842, 1309, 1532
HpyF10VI	GCNNNNNNNGC	7 cut(s)	87, 168, 487, 575, 862, 1306, 1792
HpyF3I	CTNAG	5 cut(s)	10, 85, 565, 687, 754
HpySE526I	ACGT	1 cut(s)	1528
Hsp92I	GRCGYC	1 cut(s)	1010
Hsp92II	CATG	9 cut(s)	133, 524, 1258, 1273, 1462, 1519, 1594, 1754, 1799
HspAI	GCGC	4 cut(s)	127, 588, 854, 1731
KspI	CCGCGG	1 cut(s)	78
Kzo9I	GATC	4 cut(s)	321, 1512, 1648, 1669
LmnI	GCTCC	3 cut(s)	693, 1211, 1658
Lsp1109I	GCAGC	3 cut(s)	267, 490, 493
LweI	GCATC	7 cut(s)	40, 82, 1296, 1330, 1335, 1626, 1825
MaeI	CTAG	4 cut(s)	615, 983, 1746, 1852
MaeII	ACGT	1 cut(s)	1528
MalI	GATC	4 cut(s)	323, 1514, 1650, 1671
MboI	GATC	4 cut(s)	321, 1512, 1648, 1669
MflI	RGATCY	2 cut(s)	321, 1648
MhlI	GDGCHC	5 cut(s)	83, 990, 1449, 1534, 1851
MluCI	AATT	9 cut(s)	343, 433, 649, 656, 747, 804, 829, 868, 1050
MlyI	GAGTC	8 cut(s)	2, 470, 710, 719, 760, 1107, 1260, 1817
MroXI	GAANNNNTTC	1 cut(s)	312
MseI	TTAA	4 cut(s)	630, 711, 746, 887
MslI	CAYNNNNRTG	2 cut(s)	134, 1800
MspA1I	CMGCKG	1 cut(s)	77
MspI	CCGG	7 cut(s)	151, 262, 763, 1302, 1500, 1633, 1697
Mva1269I	GAATGC	1 cut(s)	385
MvaI	CCWGG	9 cut(s)	285, 779, 1209, 1323, 1423, 1455, 1488, 1524, 1557
MvnI	CGCG	6 cut(s)	77, 127, 171, 590, 854, 1077
MwoI	GCNNNNNNNGC	7 cut(s)	87, 168, 487, 575, 862, 1306, 1792
NciI	CCSGG	3 cut(s)	1302, 1303, 1500
NdeII	GATC	4 cut(s)	321, 1512, 1648, 1669
NlaIII	CATG	9 cut(s)	133, 524, 1258, 1273, 1462, 1519, 1594, 1754, 1799
NmeAIII	GCCGAG	1 cut(s)	1586
NspI	RCATGY	2 cut(s)	133, 524
PaeI	GCATGC	1 cut(s)	133
PceI	AGGCCT	1 cut(s)	21
PciI	ACATGT	1 cut(s)	520
PctI	GAATGC	1 cut(s)	385
PdmI	GAANNNNTTC	1 cut(s)	312
PfeI	GAWTC	2 cut(s)	1067, 1123
PflFI	GACNNNGTC	1 cut(s)	1133
PflMI	CCANNNNNTGG	3 cut(s)	1112, 1286, 1502
PfoI	TCCNGGA	2 cut(s)	1207, 1522
PkrI	GCNGC	6 cut(s)	143, 170, 282, 480, 483, 1063
PleI	GAGTC	8 cut(s)	2, 469, 709, 719, 760, 1106, 1259, 1817
PpsI	GAGTC	8 cut(s)	2, 469, 709, 719, 760, 1106, 1259, 1817
PpuMI	RGGWCCY	3 cut(s)	425, 1334, 1520
PscI	ACATGT	1 cut(s)	520
Psp124BI	GAGCTC	1 cut(s)	990
Psp5II	RGGWCCY	3 cut(s)	425, 1334, 1520
Psp6I	CCWGG	9 cut(s)	283, 777, 1207, 1321, 1421, 1453, 1486, 1522, 1555
PspGI	CCWGG	9 cut(s)	283, 777, 1207, 1321, 1421, 1453, 1486, 1522, 1555
PspOMI	GGGCCC	2 cut(s)	79, 1445
PspPPI	RGGWCCY	3 cut(s)	425, 1334, 1520
PstI	CTGCAG	1 cut(s)	535
PstNI	CAGNNNCTG	1 cut(s)	464
PsuI	RGATCY	2 cut(s)	321, 1648
PsyI	GACNNNGTC	1 cut(s)	1133
RsaI	GTAC	4 cut(s)	158, 188, 227, 666
RsaNI	GTAC	4 cut(s)	157, 187, 226, 665
RseI	CAYNNNNRTG	2 cut(s)	134, 1800
SacI	GAGCTC	1 cut(s)	990
SacII	CCGCGG	1 cut(s)	78
SaqAI	TTAA	4 cut(s)	630, 711, 746, 887
SatI	GCNGC	6 cut(s)	142, 169, 281, 479, 482, 1062
Sau3AI	GATC	4 cut(s)	321, 1512, 1648, 1669
SchI	GAGTC	8 cut(s)	2, 470, 710, 719, 760, 1107, 1260, 1817
SduI	GDGCHC	5 cut(s)	83, 990, 1449, 1534, 1851
SfaNI	GCATC	7 cut(s)	40, 82, 1296, 1330, 1335, 1626, 1825
SfcI	CTRYAG	1 cut(s)	531
Sfr303I	CCGCGG	1 cut(s)	78
SgrBI	CCGCGG	1 cut(s)	78
SinI	GGWCC	9 cut(s)	251, 287, 425, 1334, 1355, 1418, 1520, 1694, 1706
SmaI	CCCGGG	1 cut(s)	1303
SmiMI	CAYNNNNRTG	2 cut(s)	134, 1800
SmlI	CTYRAG	2 cut(s)	603, 1025
SmoI	CTYRAG	2 cut(s)	603, 1025
SphI	GCATGC	1 cut(s)	133
Sse9I	AATT	9 cut(s)	343, 433, 649, 656, 747, 804, 829, 868, 1050
SseBI	AGGCCT	1 cut(s)	21
SspMI	CTAG	4 cut(s)	615, 983, 1746, 1852
SstI	GAGCTC	1 cut(s)	990
StuI	AGGCCT	1 cut(s)	21
StyI	CCWWGG	2 cut(s)	1280, 1652
TaaI	ACNGT	3 cut(s)	64, 903, 1725
TaiI	ACGT	1 cut(s)	1531
TaqI	TCGA	6 cut(s)	30, 36, 48, 769, 1055, 1790
TaqII	GACCGA	1 cut(s)	1187
TasI	AATT	9 cut(s)	343, 433, 649, 656, 747, 804, 829, 868, 1050
TatI	WGTACW	3 cut(s)	186, 225, 664
TauI	GCSGC	3 cut(s)	144, 171, 1064
TfiI	GAWTC	2 cut(s)	1067, 1123
Tru1I	TTAA	4 cut(s)	630, 711, 746, 887
Tru9I	TTAA	4 cut(s)	630, 711, 746, 887
TscAI	CASTG	3 cut(s)	306, 960, 1672
TseI	GCWGC	3 cut(s)	280, 478, 481
TspDTI	ATGAA	2 cut(s)	729, 1167
TspGWI	ACGGA	6 cut(s)	30, 861, 982, 1371, 1377, 1401
TspMI	CCCGGG	1 cut(s)	1301
TspRI	CASTG	3 cut(s)	306, 960, 1672
Tth111I	GACNNNGTC	1 cut(s)	1133
Van91I	CCANNNNNTGG	3 cut(s)	1112, 1286, 1502
VneI	GTGCAC	1 cut(s)	1530
VpaK11BI	GGWCC	9 cut(s)	251, 287, 425, 1334, 1355, 1418, 1520, 1694, 1706
XagI	CCTNNNNNAGG	2 cut(s)	420, 1212
XapI	RAATTY	3 cut(s)	649, 868, 1050
XbaI	TCTAGA	1 cut(s)	1745
XceI	RCATGY	2 cut(s)	133, 524
XcmI	CCANNNNNNNNNTGG	2 cut(s)	436, 521
XmaI	CCCGGG	1 cut(s)	1301
XmnI	GAANNNNTTC	1 cut(s)	312
XspI	CTAG	4 cut(s)	615, 983, 1746, 1852

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.