pycom10g21270

Nucleoporin protein Ndc1-Nup

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
OG0014392
Physical Location & Seq
Reverse (-)
23952675 .. 23955812
3138 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g21270.4

Sequence Viewer

Length: 1551 bp
ATGCCGCCTCCAGCTTCACCGTCGATGCCGCCGGAGATGGTGGTCCACAACCGCTTCTTAGGGTTCCTCATATGGCAGTCCATCCCCTCCATCGTCATCTTCTTCCTCTTCAAAACCCTCCCATCAACCGTCCCCTTCGCTTCTCCCTCGGCCGCCAAACCCCCACTCACATTCCCGTTCTCCCCATCGATATTCGCCCTTTTTACGTTTTTGAGCTTCCACCTTTCCCAGGTCCTCTTCTCGTTCTCGCTCTCCCTCGTCTCCTCGCTCCACCCACACCGCCCTGCTTCTCTTCTCCAGCTCGTTCTTGGGCTCGTTCGATTCCTTTCAATTCCGGGCGGCCCTGATTCGTCAGAGACCCCGGATTCCCGGGCCCGGGCTATGCTTTCGGTGGGTTTCCTGATGTTTTTGGGCGCCGCGGCGGTGTCAGGGTTTGTTGCGGTGGCTTCGGTGTGTGGGGGGTTTGGCGATGGGGTTTCGGCGATTGGGAGTGTTGGGTTTAGGGGTTTAGTGATGGGGTTGCTTTATGGGCTGTATTATGTGTATAATCGCAGGTGGGTCTTGGAGTTTCCCATTATTCAGCGTCCTCCTTTTTTCAGCTTCAAAATGGGGCTTCCTTCGGCAATCACACGATCCTTGAAGCTTTCCTTTGTGGCGTACCTTTTTTCAGCTGCTCTGCAGGTGTTTCTGCCACACCACAATCAGAACCAGGCTACAACTGGAAAGTTTATTGCTGAGCAGATCAGACTCTACACTGGGAGTTTCTTAGTGTTACTATGCTGGGAACTAAGTCACCATTTACATCGGGTGATTCATACAAAGAGATTCGTATTTGCACCACCTAAAGGATCAGCAGCAGCAGAAACAAATCCAAGTGAAATTCTCCTTGCAGCTCTGGAGGAGAGCAGTCCTAGTTCTCTTCTTCAGTATCTTGCCTATCTTGATCTCTGTATGGTTTGCGAGAATAATGTGGATGCTTGGAGAAAAGCTGCATTTTTTGAGGAAACTGGTGAGACTTACAGAAGAGGGATATCTGTATGCTTGCGGCCTCTGGAGCAGCTTGCATCAAAGCTGGGTGAAGGCTTGGAAAGTTCCGTTGAAAACGGCTCCCGAATATCCAGTCAGTTACTGTCCCCAACTGACCAGCGACTAGACTCAAAATGCTCTGAACCTTTGAATAACTTCCAGTTGTATGCATGGTGTGCATGGACAGCTGCCTCGCTAACTGCATGCTCACACAAAGAGGACAGATACGGGGTTTCCCAGATCACTGGTAGTAACGCTGCTGTGATGTCAACGCTGATTTCTTGCCTTCTTGCTGTTGAAACATACATGGGGAAGAAGACCACTTTGCAGTCTGCTAATCAGTTCATGGGGTTAACCGGTTTTAAATTGAGAAACACGAGCATGGCCAATACTAGCATGAGTAAAAAGAGAGCCAGCCCGCTTCATTCAAAAGCATATGCTGTTGCTGATGTACTGAGGAACTCAATCTACCAAATTGTGTCTGCTTTCCATGATCGATCGAGATCCTTTGGCAAGCAGTGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03013 map03013
Pfam Domains
Protein Families
Ndc1_Nup

Protein Analysis

517

Amino Acids

56.62

Weight (kDa)

9.3

Isoelectric Point (pI)

52.71

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014392)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G73240
fragaria_vesca FvH4_3g04970
malus_domestica MD05G1278400.v1.1 MD10G1257000.v1.1
prunus_persica Prupe.4G086400_v2.0.a1
pyrus_communis pycom05g25900 pycom10g21270
rosa_chinensis RchiOBHm_Chr5g0015011
rosa_laevigata RLG00000032160
rosa_multiflora Rmu_sc0004889.1_g000023
rosa_roxburghii Rroxscaffold_1G00061530
rosa_rugosa Rorug05G0022800
rosa_samantha Rh5AG118000 Rh5BG115200 Rh5CG126500 Rh5DG114700
rosa_wichuraiana Rw5G010170

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 543, 670
Acc36I ACCTGC 2 cut(s) 543, 670
AccB1I GGYRCC 1 cut(s) 413
AccII CGCG 1 cut(s) 419
AclWI GGATC 3 cut(s) 627, 856, 1524
AcoI YGGCCR 2 cut(s) 150, 1410
AcsI RAATTY 1 cut(s) 879
AcuI CTGAAG 1 cut(s) 908
AcyI GRCGYC 1 cut(s) 414
AfaI GTAC 2 cut(s) 659, 1479
AfiI CCNNNNNNNGG 4 cut(s) 229, 375, 376, 845
AgeI ACCGGT 1 cut(s) 1382
AgsI TTSAA 8 cut(s) 112, 330, 604, 640, 1100, 1177, 1325, 1455
AjnI CCWGG 2 cut(s) 228, 708
Alw26I GTCTC 3 cut(s) 265, 350, 1007
AlwI GGATC 3 cut(s) 627, 856, 1524
AlwNI CAGNNNCTG 1 cut(s) 1129
Ama87I CYCGRG 2 cut(s) 369, 375
AoxI GGCC 5 cut(s) 150, 340, 372, 1046, 1410
ApaI GGGCCC 1 cut(s) 376
ApeKI GCWGC 8 cut(s) 671, 854, 857, 890, 989, 1057, 1214, 1283
ApoI RAATTY 1 cut(s) 879
ArsI GACNNNNNNTTYG 2 cut(s) 1105, 1137
AsiGI ACCGGT 1 cut(s) 1382
Asp700I GAANNNNTTC 1 cut(s) 1181
AspLEI GCGC 1 cut(s) 416
AspS9I GGNCC 5 cut(s) 43, 232, 341, 372, 373
AsuC2I CCSGG 6 cut(s) 336, 362, 370, 371, 376, 377
AsuHPI GGTGA 5 cut(s) 9, 785, 820, 1022, 1088
AvaI CYCGRG 2 cut(s) 369, 375
AvaII GGWCC 2 cut(s) 43, 232
BaeGI GKGCMC 1 cut(s) 376
BalI TGGCCA 1 cut(s) 1412
BanI GGYRCC 1 cut(s) 413
BanII GRGCYC 2 cut(s) 315, 376
BauI CACGAG 1 cut(s) 1402
BbsI GAAGAC 1 cut(s) 1349
BbvI GCAGC 8 cut(s) 658, 866, 869, 902, 976, 1069, 1201, 1270
BccI CCATC 7 cut(s) 31, 89, 98, 130, 193, 464, 508
BceAI ACGGC 1 cut(s) 1120
BciT130I CCWGG 2 cut(s) 230, 710
BcnI CCSGG 6 cut(s) 336, 362, 370, 371, 376, 377
BcoDI GTCTC 3 cut(s) 265, 350, 1007
BfaI CTAG 3 cut(s) 912, 1151, 1419
BfmI CTRYAG 1 cut(s) 677
BfoI RGCGCY 1 cut(s) 417
BfuAI ACCTGC 2 cut(s) 543, 670
BlpI GCTNAGC 1 cut(s) 735
Bme1390I CCNGG 8 cut(s) 230, 336, 362, 370, 371, 376, 377, 710
Bme18I GGWCC 2 cut(s) 43, 232
BmeT110I CYCGRG 2 cut(s) 369, 375
BmgT120I GGNCC 5 cut(s) 43, 232, 341, 372, 373
BmiI GGNNCC 4 cut(s) 65, 374, 415, 1108
BmrFI CCNGG 8 cut(s) 230, 336, 362, 370, 371, 376, 377, 710
BmrI ACTGGG 1 cut(s) 765
BmsI GCATC 3 cut(s) 15, 964, 1073
BmuI ACTGGG 1 cut(s) 765
BpiI GAAGAC 1 cut(s) 1349
BpmI CTGGAG 3 cut(s) 281, 917, 1073
Bpu1102I GCTNAGC 1 cut(s) 735
BpuMI CCSGG 6 cut(s) 336, 362, 370, 371, 376, 377
Bsa29I ATCGAT 2 cut(s) 188, 1522
BsaBI GATNNNNATC 1 cut(s) 1528
BsaHI GRCGYC 1 cut(s) 414
BsaI GGTCTC 1 cut(s) 350
BsaJI CCNNGG 6 cut(s) 147, 228, 360, 369, 375, 417
BsaWI WCCGGW 1 cut(s) 1382
Bsc4I CCNNNNNNNGG 4 cut(s) 229, 375, 376, 845
Bse118I RCCGGY 1 cut(s) 1382
Bse1I ACTGG 6 cut(s) 724, 760, 1012, 1119, 1186, 1276
Bse8I GATNNNNATC 1 cut(s) 1528
BseBI CCWGG 2 cut(s) 230, 710
BseCI ATCGAT 2 cut(s) 188, 1522
BseDI CCNNGG 6 cut(s) 147, 228, 360, 369, 375, 417
BseGI GGATG 2 cut(s) 81, 979
BseJI GATNNNNATC 1 cut(s) 1528
BseLI CCNNNNNNNGG 4 cut(s) 229, 375, 376, 845
BseMII CTCAG 2 cut(s) 726, 1472
BseNI ACTGG 6 cut(s) 724, 760, 1012, 1119, 1186, 1276
BseRI GAGGAG 2 cut(s) 253, 914
BseSI GKGCMC 1 cut(s) 376
BseX3I CGGCCG 1 cut(s) 150
BseXI GCAGC 8 cut(s) 658, 866, 869, 902, 976, 1069, 1201, 1270
BseYI CCCAGC 2 cut(s) 780, 1072
Bsh1236I CGCG 1 cut(s) 419
Bsh1285I CGRYCG 2 cut(s) 153, 1526
BshFI GGCC 5 cut(s) 152, 342, 374, 1048, 1412
BshNI GGYRCC 1 cut(s) 413
BshTI ACCGGT 1 cut(s) 1382
BshVI ATCGAT 2 cut(s) 188, 1522
BsiEI CGRYCG 2 cut(s) 153, 1526
BsiHKCI CYCGRG 2 cut(s) 369, 375
BsiSI CCGG 6 cut(s) 32, 335, 362, 370, 376, 1383
BslFI GGGAC 2 cut(s) 116, 1117
BslI CCNNNNNNNGG 4 cut(s) 229, 375, 376, 845
BsmAI GTCTC 3 cut(s) 265, 350, 1007
BsmBI CGTCTC 1 cut(s) 265
BsmFI GGGAC 2 cut(s) 116, 1117
BsnI GGCC 5 cut(s) 152, 342, 374, 1048, 1412
Bso31I GGTCTC 1 cut(s) 350
BsoBI CYCGRG 2 cut(s) 369, 375
Bsp120I GGGCCC 1 cut(s) 372
Bsp1286I GDGCHC 2 cut(s) 315, 376
Bsp143I GATC 8 cut(s) 632, 741, 848, 943, 1266, 1519, 1523, 1529
Bsp1720I GCTNAGC 1 cut(s) 735
BspANI GGCC 5 cut(s) 152, 342, 374, 1048, 1412
BspCNI CTCAG 2 cut(s) 727, 1473
BspDI ATCGAT 2 cut(s) 188, 1522
BspFNI CGCG 1 cut(s) 419
BspLI GGNNCC 4 cut(s) 65, 374, 415, 1108
BspMAI CTGCAG 1 cut(s) 681
BspMI ACCTGC 2 cut(s) 543, 670
BspPI GGATC 3 cut(s) 627, 856, 1524
BspT107I GGYRCC 1 cut(s) 413
BspTNI GGTCTC 1 cut(s) 350
BsrFI RCCGGY 1 cut(s) 1382
BsrI ACTGG 6 cut(s) 724, 760, 1012, 1119, 1186, 1276
BssAI RCCGGY 1 cut(s) 1382
BssECI CCNNGG 6 cut(s) 147, 228, 360, 369, 375, 417
BssMI GATC 8 cut(s) 632, 741, 848, 943, 1266, 1519, 1523, 1529
BssNI GRCGYC 1 cut(s) 414
BssSI CACGAG 1 cut(s) 1402
Bst2BI CACGAG 1 cut(s) 1402
Bst2UI CCWGG 2 cut(s) 230, 710
Bst4CI ACNGT 3 cut(s) 21, 130, 1131
Bst6I CTCTTC 5 cut(s) 113, 242, 297, 924, 1018
BstACI GRCGYC 1 cut(s) 414
BstAPI GCANNNNNTGC 2 cut(s) 1202, 1545
BstC8I GCNNGC 6 cut(s) 1043, 1062, 1231, 1441, 1445, 1541
BstDEI CTNAG 5 cut(s) 58, 735, 766, 788, 1481
BstDSI CCRYGG 1 cut(s) 417
BstENI CCTNNNNNAGG 1 cut(s) 227
BstF5I GGATG 2 cut(s) 81, 979
BstFNI CGCG 1 cut(s) 419
BstH2I RGCGCY 1 cut(s) 417
BstHHI GCGC 1 cut(s) 416
BstKTI GATC 8 cut(s) 635, 744, 851, 946, 1269, 1522, 1526, 1532
BstMAI GTCTC 3 cut(s) 265, 350, 1007
BstMBI GATC 8 cut(s) 632, 741, 848, 943, 1266, 1519, 1523, 1529
BstMCI CGRYCG 2 cut(s) 153, 1526
BstMWI GCNNNNNNNGC 5 cut(s) 529, 1054, 1202, 1211, 1545
BstNI CCWGG 2 cut(s) 230, 710
BstNSI RCATGY 1 cut(s) 1233
BstSCI CCNGG 8 cut(s) 228, 334, 360, 368, 369, 374, 375, 708
BstSFI CTRYAG 1 cut(s) 677
BstSLI GKGCMC 1 cut(s) 376
BstUI CGCG 1 cut(s) 419
BstV1I GCAGC 8 cut(s) 658, 866, 869, 902, 976, 1069, 1201, 1270
BstV2I GAAGAC 1 cut(s) 1349
BstX2I RGATCY 1 cut(s) 1529
BstXI CCANNNNNNTGG 1 cut(s) 1271
BstYI RGATCY 1 cut(s) 1529
BstZI CGGCCG 1 cut(s) 150
Bsu15I ATCGAT 2 cut(s) 188, 1522
BsuRI GGCC 5 cut(s) 152, 342, 374, 1048, 1412
BsuTUI ATCGAT 2 cut(s) 188, 1522
BtgI CCRYGG 1 cut(s) 417
BtgZI GCGATG 1 cut(s) 483
BtsCI GGATG 2 cut(s) 81, 979
BtsI GCAGTG 1 cut(s) 1550
BtsIMutI CAGTG 3 cut(s) 753, 1269, 1550
BveI ACCTGC 2 cut(s) 543, 670
Cac8I GCNNGC 6 cut(s) 1043, 1062, 1231, 1441, 1445, 1541
CaiI CAGNNNCTG 1 cut(s) 1129
CfoI GCGC 1 cut(s) 416
Cfr10I RCCGGY 1 cut(s) 1382
Cfr13I GGNCC 5 cut(s) 43, 232, 341, 372, 373
Cfr42I CCGCGG 1 cut(s) 420
Cfr9I CCCGGG 2 cut(s) 369, 375
ClaI ATCGAT 2 cut(s) 188, 1522
CseI GACGC 1 cut(s) 572
Csp6I GTAC 2 cut(s) 658, 1478
CspAI ACCGGT 1 cut(s) 1382
CviAII CATG 8 cut(s) 1197, 1206, 1230, 1333, 1372, 1408, 1423, 1517
CviQI GTAC 2 cut(s) 658, 1478
DdeI CTNAG 5 cut(s) 58, 735, 766, 788, 1481
DinI GGCGCC 1 cut(s) 415
DpnI GATC 8 cut(s) 634, 743, 850, 945, 1268, 1521, 1525, 1531
DpnII GATC 8 cut(s) 632, 741, 848, 943, 1266, 1519, 1523, 1529
DraI TTTAAA 1 cut(s) 1390
EaeI YGGCCR 2 cut(s) 150, 1410
EagI CGGCCG 1 cut(s) 150
Eam1104I CTCTTC 5 cut(s) 113, 242, 297, 924, 1018
EarI CTCTTC 5 cut(s) 113, 242, 297, 924, 1018
EclXI CGGCCG 1 cut(s) 150
Eco24I GRGCYC 2 cut(s) 315, 376
Eco31I GGTCTC 1 cut(s) 350
Eco32I GATATC 1 cut(s) 1032
Eco47I GGWCC 2 cut(s) 43, 232
Eco52I CGGCCG 1 cut(s) 150
Eco57I CTGAAG 1 cut(s) 908
Eco88I CYCGRG 2 cut(s) 369, 375
EcoNI CCTNNNNNAGG 1 cut(s) 227
EcoO109I RGGNCCY 1 cut(s) 232
EcoRII CCWGG 2 cut(s) 228, 708
EcoRV GATATC 1 cut(s) 1032
EcoT22I ATGCAT 1 cut(s) 1198
EcoT38I GRGCYC 2 cut(s) 315, 376
EgeI GGCGCC 1 cut(s) 415
EheI GGCGCC 1 cut(s) 415
Esp3I CGTCTC 1 cut(s) 265
FaeI CATG 8 cut(s) 1200, 1209, 1233, 1336, 1375, 1411, 1426, 1520
FalI AAGNNNNNCTT 2 cut(s) 632, 664
FaqI GGGAC 2 cut(s) 116, 1117
FatI CATG 8 cut(s) 1196, 1205, 1229, 1332, 1371, 1407, 1422, 1516
FauI CCCGC 1 cut(s) 1452
FauNDI CATATG 2 cut(s) 71, 1462
FokI GGATG 2 cut(s) 68, 986
FriOI GRGCYC 2 cut(s) 315, 376
FspBI CTAG 3 cut(s) 912, 1151, 1419
GlaI GCGC 1 cut(s) 415
GsaI CCCAGC 2 cut(s) 784, 1076
GsuI CTGGAG 3 cut(s) 281, 917, 1073
HaeII RGCGCY 1 cut(s) 417
HaeIII GGCC 5 cut(s) 152, 342, 374, 1048, 1412
HapII CCGG 6 cut(s) 32, 335, 362, 370, 376, 1383
HgaI GACGC 1 cut(s) 572
HhaI GCGC 1 cut(s) 416
Hin1I GRCGYC 1 cut(s) 414
Hin1II CATG 8 cut(s) 1200, 1209, 1233, 1336, 1375, 1411, 1426, 1520
Hin6I GCGC 1 cut(s) 414
HinP1I GCGC 1 cut(s) 414
HincII GTYRAC 2 cut(s) 1296, 1380
HindII GTYRAC 2 cut(s) 1296, 1380
HindIII AAGCTT 1 cut(s) 641
HinfI GANTC 7 cut(s) 321, 347, 365, 747, 811, 825, 1154
HpaI GTTAAC 1 cut(s) 1380
HpaII CCGG 6 cut(s) 32, 335, 362, 370, 376, 1383
HphI GGTGA 5 cut(s) 9, 785, 820, 1022, 1088
Hpy166II GTNNAC 3 cut(s) 46, 1296, 1380
Hpy188I TCNGA 4 cut(s) 355, 705, 746, 1168
Hpy188III TCNNGA 6 cut(s) 400, 896, 941, 1052, 1110, 1527
Hpy8I GTNNAC 3 cut(s) 46, 1296, 1380
Hpy99I CGWCG 1 cut(s) 25
HpyAV CCTTC 4 cut(s) 145, 627, 1073, 1322
HpyCH4III ACNGT 3 cut(s) 21, 130, 1131
HpyCH4IV ACGT 1 cut(s) 206
HpyCH4V TGCA 9 cut(s) 679, 836, 890, 992, 1064, 1196, 1205, 1229, 1354
HpyF10VI GCNNNNNNNGC 5 cut(s) 529, 1054, 1202, 1211, 1545
HpyF3I CTNAG 5 cut(s) 58, 735, 766, 788, 1481
HpySE526I ACGT 1 cut(s) 206
Hsp92I GRCGYC 1 cut(s) 414
Hsp92II CATG 8 cut(s) 1200, 1209, 1233, 1336, 1375, 1411, 1426, 1520
HspAI GCGC 1 cut(s) 414
KasI GGCGCC 1 cut(s) 413
KspAI GTTAAC 1 cut(s) 1380
KspI CCGCGG 1 cut(s) 420
Kzo9I GATC 8 cut(s) 632, 741, 848, 943, 1266, 1519, 1523, 1529
LmnI GCTCC 3 cut(s) 273, 1054, 1112
Lsp1109I GCAGC 8 cut(s) 658, 866, 869, 902, 976, 1069, 1201, 1270
LweI GCATC 3 cut(s) 15, 964, 1073
MaeI CTAG 3 cut(s) 912, 1151, 1419
MaeII ACGT 1 cut(s) 206
MaeIII GTNAC 4 cut(s) 771, 791, 1125, 1277
MalI GATC 8 cut(s) 634, 743, 850, 945, 1268, 1521, 1525, 1531
MboI GATC 8 cut(s) 632, 741, 848, 943, 1266, 1519, 1523, 1529
MflI RGATCY 1 cut(s) 1529
MhlI GDGCHC 2 cut(s) 315, 376
MlsI TGGCCA 1 cut(s) 1412
MluCI AATT 4 cut(s) 330, 879, 1391, 1500
MluNI TGGCCA 1 cut(s) 1412
Mly113I GGCGCC 1 cut(s) 414
MlyI GAGTC 2 cut(s) 741, 1148
Mox20I TGGCCA 1 cut(s) 1412
Mph1103I ATGCAT 1 cut(s) 1198
MroXI GAANNNNTTC 1 cut(s) 1181
MscI TGGCCA 1 cut(s) 1412
MseI TTAA 2 cut(s) 1379, 1389
MslI CAYNNNNRTG 1 cut(s) 1406
Msp20I TGGCCA 1 cut(s) 1412
MspA1I CMGCKG 3 cut(s) 419, 671, 1214
MspI CCGG 6 cut(s) 32, 335, 362, 370, 376, 1383
MspR9I CCNGG 8 cut(s) 230, 336, 362, 370, 371, 376, 377, 710
MvaI CCWGG 2 cut(s) 230, 710
MvnI CGCG 1 cut(s) 419
MwoI GCNNNNNNNGC 5 cut(s) 529, 1054, 1202, 1211, 1545
NarI GGCGCC 1 cut(s) 414
NciI CCSGG 6 cut(s) 336, 362, 370, 371, 376, 377
NdeI CATATG 2 cut(s) 71, 1462
NdeII GATC 8 cut(s) 632, 741, 848, 943, 1266, 1519, 1523, 1529
NlaIII CATG 8 cut(s) 1200, 1209, 1233, 1336, 1375, 1411, 1426, 1520
NlaIV GGNNCC 4 cut(s) 65, 374, 415, 1108
NmeAIII GCCGAG 1 cut(s) 128
NmuCI GTSAC 1 cut(s) 791
NsiI ATGCAT 1 cut(s) 1198
NspI RCATGY 1 cut(s) 1233
PaeI GCATGC 1 cut(s) 1233
PaqCI CACCTGC 2 cut(s) 543, 670
PdmI GAANNNNTTC 1 cut(s) 1181
PfeI GAWTC 5 cut(s) 321, 347, 365, 811, 825
PinAI ACCGGT 1 cut(s) 1382
Ple19I CGATCG 1 cut(s) 1526
PleI GAGTC 2 cut(s) 741, 1148
PluTI GGCGCC 1 cut(s) 417
PpsI GAGTC 2 cut(s) 741, 1148
PpuMI RGGWCCY 1 cut(s) 232
Psp5II RGGWCCY 1 cut(s) 232
Psp6I CCWGG 2 cut(s) 228, 708
PspFI CCCAGC 2 cut(s) 780, 1072
PspGI CCWGG 2 cut(s) 228, 708
PspN4I GGNNCC 4 cut(s) 65, 374, 415, 1108
PspOMI GGGCCC 1 cut(s) 372
PspPI GGNCC 5 cut(s) 43, 232, 341, 372, 373
PspPPI RGGWCCY 1 cut(s) 232
PsrI GAACNNNNNNTAC 2 cut(s) 1478, 1510
PstI CTGCAG 1 cut(s) 681
PstNI CAGNNNCTG 1 cut(s) 1129
PsuI RGATCY 1 cut(s) 1529
PvuI CGATCG 1 cut(s) 1526
PvuII CAGCTG 2 cut(s) 671, 1214
RsaI GTAC 2 cut(s) 659, 1479
RsaNI GTAC 2 cut(s) 658, 1478
RseI CAYNNNNRTG 1 cut(s) 1406
SacII CCGCGG 1 cut(s) 420
SaqAI TTAA 2 cut(s) 1379, 1389
Sau3AI GATC 8 cut(s) 632, 741, 848, 943, 1266, 1519, 1523, 1529
Sau96I GGNCC 5 cut(s) 43, 232, 341, 372, 373
SchI GAGTC 2 cut(s) 741, 1148
ScrFI CCNGG 8 cut(s) 230, 336, 362, 370, 371, 376, 377, 710
SduI GDGCHC 2 cut(s) 315, 376
SfaNI GCATC 3 cut(s) 15, 964, 1073
SfcI CTRYAG 1 cut(s) 677
SfoI GGCGCC 1 cut(s) 415
Sfr303I CCGCGG 1 cut(s) 420
SgrBI CCGCGG 1 cut(s) 420
SinI GGWCC 2 cut(s) 43, 232
SmaI CCCGGG 2 cut(s) 371, 377
SmiMI CAYNNNNRTG 1 cut(s) 1406
SphI GCATGC 1 cut(s) 1233
SrfI GCCCGGGC 1 cut(s) 377
Sse9I AATT 4 cut(s) 330, 879, 1391, 1500
SspDI GGCGCC 1 cut(s) 413
SspMI CTAG 3 cut(s) 912, 1151, 1419
StyD4I CCNGG 8 cut(s) 228, 334, 360, 368, 369, 374, 375, 708
TaaI ACNGT 3 cut(s) 21, 130, 1131
TaiI ACGT 1 cut(s) 209
TaqI TCGA 5 cut(s) 23, 188, 319, 1522, 1526
TasI AATT 4 cut(s) 330, 879, 1391, 1500
TatI WGTACW 1 cut(s) 1477
TauI GCSGC 7 cut(s) 7, 31, 155, 342, 419, 422, 1048
TfiI GAWTC 5 cut(s) 321, 347, 365, 811, 825
Tru1I TTAA 2 cut(s) 1379, 1389
Tru9I TTAA 2 cut(s) 1379, 1389
TscAI CASTG 3 cut(s) 760, 1276, 1550
TseFI GTSAC 1 cut(s) 791
TseI GCWGC 8 cut(s) 671, 854, 857, 890, 989, 1057, 1214, 1283
Tsp45I GTSAC 1 cut(s) 791
TspDTI ATGAA 3 cut(s) 803, 1360, 1439
TspGWI ACGGA 1 cut(s) 1084
TspMI CCCGGG 2 cut(s) 369, 375
TspRI CASTG 3 cut(s) 760, 1276, 1550
VpaK11BI GGWCC 2 cut(s) 43, 232
XagI CCTNNNNNAGG 1 cut(s) 227
XapI RAATTY 1 cut(s) 879
XceI RCATGY 1 cut(s) 1233
XcmI CCANNNNNNNNNTGG 2 cut(s) 305, 716
XmaI CCCGGG 2 cut(s) 369, 375
XmnI GAANNNNTTC 1 cut(s) 1181
XspI CTAG 3 cut(s) 912, 1151, 1419
Zsp2I ATGCAT 1 cut(s) 1198
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.