RLG00000032160

Nucleoporin protein Ndc1-Nup

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0014392
Physical Location & Seq
Forward (+)
11557264 .. 11561560
4297 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000032160

Sequence Viewer

Length: 1608 bp
ATGCCTCCGGCTTCACGTCCAGCGCCGCCGGACGCGGTGGTCCGCAACCGCTTCTTAGGGTTCCTCATCTGGCAATCCATCCCCTCCACCCTCATTTTCCTCCTCTCCGCTCTCTCTCCCTCAAAACCCCCTTTCCCATTCGCCCCATGGTTCTTCGCCGTAATTACCTTCCTGTCCTTCCACCTCTCCCAGCTCCTCTTCTCCGCCTCCCTCTCCCTCATCTCCTCCACCCACCCCCACCCACTGCTCTCGCCTCTCAAGCTCTCCCTCGAGCTCATACGCTTCCTTTTCGTTCCCGGCGGCTCCGATTTGACCGGGTCGCCGGCTTCTCGGGTCCGGGTTAGGGTCACCGTCCGCTTCGTGGCGTTTCTGGCTGCGGCGGCGGTGTCCGGGTCCGTTGCGGCGGTTTCGGTCTGCGGGGAGCTTGGTGGTGGGGTTTGGGGGATGATTGGGAGAGTAGGGTTTAGGGGTTTTGTGATGGGTTTGCTTTATGGGTTGTATTATGTGTATAAGCGCAGGTGGGTCTTGGAGTTCCCCATTATTCAGCGCCCGCCATTTTTTAGCTTCAAGATGGGTCTCCCCACGGCTATCACACGTTCCTTAAAGCTGTCCGGTGTGGCATACCTAGTCTCAGCTATTCTGGTGGTGTTCCTTCCCCATGAGTTTCACAACAGAGTTACAATTGGAAGGTTGATTGCGGAGCAGACTACCTTCTACATTGGGAGTTTCTTGGTGCTTCTGTGCTGGGAACTAAGTCACCATTTACATCAGGTGCTTAATACCAAGAGATGCATATTTGCGCCGCCTAAAGGATCAGCTGCAGCAGAAACAAATCCAACTGAGCATCTTCTTGCAGCTTTGGAGGAGAGCACTCCTAATTCTCTTCCTCAGTATCTTGCATATCTTGATCTCTGCATGATTTGTGAGAATAATGTTGATACTTGGCGACGAGCTGCCTTTTTCGAAGAAAGTGGTGAAACTTACAAAAGGGTTGTATCTGTATGCTTGCGGCCTCTGGAGCAGCTTGCATCAAAGTTGGGTGATGGCTTGGAAAGTCCTGTTAATGGAAAATCCCAAATATCCAATCAGTTACTGTCGCCAACCGACCAGCGACTAGATTCAAAATACTCTGAACCCTTCGACAACTTCCAGCTATATGCATGGTGTGCCTGGTCAGCTGCTTCACTGACTGCCCGCTCGAATACGGAGGACAGATTTGGGGTTGCCCAGAGATCGGGTAGCAATGCTGCTGTGATCTCAACACTGATCTCTTGCCTTCTTGCTGTTGAAACATACATGGGAAAGAAGACCAATGTTCCTGCACAGTTTATGGGGCCAGCTAGTATCAAATGGGCAACCTCAAGTGTGGGAAATGTTGGCGTGGCTAAAAAGAGAGTTGGCCCTATCCATCCCAAAGCATACGCCCTTGCCGATGTTCTCAAAAACTCAATCTACCATATTGTGTCCGCATGCCATGATCAGATGGTGAGCAGTGCCAAAACAGGCGTGCTTGAGAAGTATTGGGTCATCGAAGGCAAGCCTCCTTTTGGGTCACACGAGCTTCTGGTGCAGAAATTGCGTCTTTTCCTAGATTTTCGAGCTAGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03013 map03013
Pfam Domains
Protein Families
Ndc1_Nup

Protein Analysis

536

Amino Acids

58.86

Weight (kDa)

9.46

Isoelectric Point (pI)

45.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ndc1_Nup PF09531 157 - 359 1.2e-15 Nucleoporin protein Ndc1-Nup
Ndc1_Nup PF09531 369 - 490 1.2e-08 Nucleoporin protein Ndc1-Nup
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014392)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G73240
fragaria_vesca FvH4_3g04970
malus_domestica MD05G1278400.v1.1 MD10G1257000.v1.1
prunus_persica Prupe.4G086400_v2.0.a1
pyrus_communis pycom05g25900 pycom10g21270
rosa_chinensis RchiOBHm_Chr5g0015011
rosa_laevigata RLG00000032160
rosa_multiflora Rmu_sc0004889.1_g000023
rosa_roxburghii Rroxscaffold_1G00061530
rosa_rugosa Rorug05G0022800
rosa_samantha Rh5AG118000 Rh5BG115200 Rh5CG126500 Rh5DG114700
rosa_wichuraiana Rw5G010170

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 507
AasI GACNNNNNNGTC 1 cut(s) 38
Acc36I ACCTGC 1 cut(s) 507
AccBSI CCGCTC 2 cut(s) 110, 1197
AccII CGCG 1 cut(s) 35
AclWI GGATC 1 cut(s) 820
AfiI CCNNNNNNNGG 6 cut(s) 343, 361, 809, 1064, 1234, 1547
AflIII ACRYGT 1 cut(s) 593
AgsI TTSAA 3 cut(s) 568, 1122, 1289
AjiI CACGTC 1 cut(s) 17
AjnI CCWGG 1 cut(s) 1169
Alw21I GWGCWC 2 cut(s) 276, 872
Alw26I GTCTC 2 cut(s) 581, 634
AlwI GGATC 1 cut(s) 820
AlwNI CAGNNNCTG 1 cut(s) 1093
Ama87I CYCGRG 2 cut(s) 269, 330
AoxI GGCC 3 cut(s) 1010, 1334, 1399
ApeKI GCWGC 8 cut(s) 374, 818, 821, 854, 953, 1021, 1178, 1247
AspLEI GCGC 4 cut(s) 25, 516, 549, 802
AspS9I GGNCC 5 cut(s) 40, 334, 393, 1334, 1400
AsuC2I CCSGG 4 cut(s) 297, 316, 338, 391
AsuHPI GGTGA 5 cut(s) 340, 749, 986, 1052, 1498
AsuII TTCGAA 1 cut(s) 963
AsuNHI GCTAGC 1 cut(s) 1601
AvaI CYCGRG 2 cut(s) 269, 330
AvaII GGWCC 3 cut(s) 40, 334, 393
BanII GRGCYC 1 cut(s) 276
BauI CACGAG 1 cut(s) 1556
BbsI GAAGAC 1 cut(s) 1313
Bbv12I GWGCWC 2 cut(s) 276, 872
BbvI GCAGC 8 cut(s) 361, 805, 833, 866, 940, 1033, 1165, 1234
BccI CCATC 6 cut(s) 86, 472, 565, 1037, 1416, 1477
BceAI ACGGC 2 cut(s) 143, 600
BciT130I CCWGG 1 cut(s) 1171
BclI TGATCA 1 cut(s) 1477
BcnI CCSGG 4 cut(s) 297, 316, 338, 391
BcoDI GTCTC 2 cut(s) 581, 634
BfaI CTAG 5 cut(s) 626, 1115, 1341, 1589, 1602
BfmI CTRYAG 1 cut(s) 819
BfoI RGCGCY 2 cut(s) 26, 550
BfuAI ACCTGC 1 cut(s) 507
Bme1390I CCNGG 5 cut(s) 297, 316, 338, 391, 1171
Bme18I GGWCC 3 cut(s) 40, 334, 393
BmeT110I CYCGRG 2 cut(s) 269, 330
BmgBI CACGTC 1 cut(s) 17
BmgT120I GGNCC 5 cut(s) 40, 334, 393, 1334, 1400
BmiI GGNNCC 5 cut(s) 62, 304, 335, 394, 1335
BmrFI CCNGG 5 cut(s) 297, 316, 338, 391, 1171
BmsI GCATC 3 cut(s) 779, 853, 1037
BmtI GCTAGC 1 cut(s) 1605
BpiI GAAGAC 1 cut(s) 1313
BpmI CTGGAG 1 cut(s) 1037
Bpu14I TTCGAA 1 cut(s) 963
BpuEI CTTGAG 3 cut(s) 242, 1345, 1532
BpuMI CCSGG 4 cut(s) 297, 316, 338, 391
BsaI GGTCTC 1 cut(s) 581
BsaJI CCNNGG 2 cut(s) 146, 582
BsaWI WCCGGW 1 cut(s) 611
Bsc4I CCNNNNNNNGG 6 cut(s) 343, 361, 809, 1064, 1234, 1547
Bse118I RCCGGY 1 cut(s) 322
Bse3DI GCAATG 1 cut(s) 1249
BseBI CCWGG 1 cut(s) 1171
BseDI CCNNGG 2 cut(s) 146, 582
BseGI GGATG 3 cut(s) 78, 450, 1408
BseLI CCNNNNNNNGG 6 cut(s) 343, 361, 809, 1064, 1234, 1547
BseMI GCAATG 1 cut(s) 1249
BseMII CTCAG 3 cut(s) 645, 831, 902
BseRI GAGGAG 4 cut(s) 92, 185, 214, 878
BseXI GCAGC 8 cut(s) 361, 805, 833, 866, 940, 1033, 1165, 1234
BseYI CCCAGC 2 cut(s) 189, 744
BsgI GTGCAG 2 cut(s) 1305, 1589
Bsh1236I CGCG 1 cut(s) 35
BshFI GGCC 3 cut(s) 1012, 1336, 1401
BsiHKAI GWGCWC 2 cut(s) 276, 872
BsiHKCI CYCGRG 2 cut(s) 269, 330
BsiSI CCGG 8 cut(s) 8, 29, 297, 315, 323, 337, 390, 612
BslI CCNNNNNNNGG 6 cut(s) 343, 361, 809, 1064, 1234, 1547
BsmAI GTCTC 2 cut(s) 581, 634
BsnI GGCC 3 cut(s) 1012, 1336, 1401
Bso31I GGTCTC 1 cut(s) 581
BsoBI CYCGRG 2 cut(s) 269, 330
Bsp119I TTCGAA 1 cut(s) 963
Bsp1286I GDGCHC 2 cut(s) 276, 872
Bsp143I GATC 6 cut(s) 812, 907, 1232, 1254, 1266, 1477
Bsp19I CCATGG 1 cut(s) 146
BspANI GGCC 3 cut(s) 1012, 1336, 1401
BspCNI CTCAG 3 cut(s) 644, 832, 901
BspFNI CGCG 1 cut(s) 35
BspLI GGNNCC 5 cut(s) 62, 304, 335, 394, 1335
BspMAI CTGCAG 1 cut(s) 823
BspMI ACCTGC 1 cut(s) 507
BspOI GCTAGC 1 cut(s) 1605
BspPI GGATC 1 cut(s) 820
BspT104I TTCGAA 1 cut(s) 963
BspTNI GGTCTC 1 cut(s) 581
BsrBI CCGCTC 2 cut(s) 110, 1197
BsrDI GCAATG 1 cut(s) 1249
BsrFI RCCGGY 1 cut(s) 322
BssAI RCCGGY 1 cut(s) 322
BssECI CCNNGG 2 cut(s) 146, 582
BssMI GATC 6 cut(s) 812, 907, 1232, 1254, 1266, 1477
BssSI CACGAG 1 cut(s) 1556
BssT1I CCWWGG 1 cut(s) 146
Bst2BI CACGAG 1 cut(s) 1556
Bst2UI CCWGG 1 cut(s) 1171
Bst4CI ACNGT 3 cut(s) 352, 1095, 1326
Bst6I CTCTTC 2 cut(s) 203, 888
BstAPI GCANNNNNTGC 2 cut(s) 1166, 1576
BstBI TTCGAA 1 cut(s) 963
BstDEI CTNAG 5 cut(s) 55, 631, 752, 840, 888
BstDSI CCRYGG 2 cut(s) 146, 582
BstEII GGTNACC 1 cut(s) 346
BstF5I GGATG 3 cut(s) 78, 450, 1408
BstFNI CGCG 1 cut(s) 35
BstH2I RGCGCY 2 cut(s) 26, 550
BstHHI GCGC 4 cut(s) 25, 516, 549, 802
BstKTI GATC 6 cut(s) 815, 910, 1235, 1257, 1269, 1480
BstMAI GTCTC 2 cut(s) 581, 634
BstMBI GATC 6 cut(s) 812, 907, 1232, 1254, 1266, 1477
BstMWI GCNNNNNNNGC 8 cut(s) 259, 371, 380, 1018, 1166, 1175, 1567, 1576
BstNI CCWGG 1 cut(s) 1171
BstNSI RCATGY 1 cut(s) 1473
BstPI GGTNACC 1 cut(s) 346
BstSCI CCNGG 5 cut(s) 295, 314, 336, 389, 1169
BstSFI CTRYAG 1 cut(s) 819
BstUI CGCG 1 cut(s) 35
BstV1I GCAGC 8 cut(s) 361, 805, 833, 866, 940, 1033, 1165, 1234
BstV2I GAAGAC 1 cut(s) 1313
BsuRI GGCC 3 cut(s) 1012, 1336, 1401
BtgI CCRYGG 2 cut(s) 146, 582
BtrI CACGTC 1 cut(s) 17
BtsCI GGATG 3 cut(s) 78, 450, 1408
BtsI GCAGTG 2 cut(s) 242, 1498
BtsIMutI CAGTG 4 cut(s) 242, 1184, 1262, 1498
BveI ACCTGC 1 cut(s) 507
CaiI CAGNNNCTG 1 cut(s) 1093
CfoI GCGC 4 cut(s) 25, 516, 549, 802
Cfr10I RCCGGY 1 cut(s) 322
Cfr13I GGNCC 5 cut(s) 40, 334, 393, 1334, 1400
CseI GACGC 2 cut(s) 41, 1568
CviAII CATG 7 cut(s) 147, 659, 916, 1161, 1297, 1470, 1475
DdeI CTNAG 5 cut(s) 55, 631, 752, 840, 888
DpnI GATC 6 cut(s) 814, 909, 1234, 1256, 1268, 1479
DpnII GATC 6 cut(s) 812, 907, 1232, 1254, 1266, 1477
DrdI GACNNNNNNGTC 1 cut(s) 38
DseDI GACNNNNNNGTC 1 cut(s) 38
Eam1104I CTCTTC 2 cut(s) 203, 888
EarI CTCTTC 2 cut(s) 203, 888
EciI GGCGGA 1 cut(s) 193
Ecl136II GAGCTC 1 cut(s) 274
Eco130I CCWWGG 1 cut(s) 146
Eco24I GRGCYC 1 cut(s) 276
Eco31I GGTCTC 1 cut(s) 581
Eco47I GGWCC 3 cut(s) 40, 334, 393
Eco53kI GAGCTC 1 cut(s) 274
Eco88I CYCGRG 2 cut(s) 269, 330
Eco91I GGTNACC 1 cut(s) 346
EcoICRI GAGCTC 1 cut(s) 274
EcoO65I GGTNACC 1 cut(s) 346
EcoRII CCWGG 1 cut(s) 1169
EcoT14I CCWWGG 1 cut(s) 146
EcoT22I ATGCAT 2 cut(s) 794, 1162
EcoT38I GRGCYC 1 cut(s) 276
ErhI CCWWGG 1 cut(s) 146
FaeI CATG 7 cut(s) 150, 662, 919, 1164, 1300, 1473, 1478
FatI CATG 7 cut(s) 146, 658, 915, 1160, 1296, 1469, 1474
FauI CCCGC 3 cut(s) 410, 558, 1202
FbaI TGATCA 1 cut(s) 1477
FokI GGATG 3 cut(s) 65, 457, 1395
FriOI GRGCYC 1 cut(s) 276
FspBI CTAG 5 cut(s) 626, 1115, 1341, 1589, 1602
GlaI GCGC 4 cut(s) 24, 515, 548, 801
GsaI CCCAGC 2 cut(s) 193, 748
GsuI CTGGAG 1 cut(s) 1037
HaeII RGCGCY 2 cut(s) 26, 550
HaeIII GGCC 3 cut(s) 1012, 1336, 1401
HapII CCGG 8 cut(s) 8, 29, 297, 315, 323, 337, 390, 612
HgaI GACGC 2 cut(s) 41, 1568
HhaI GCGC 4 cut(s) 25, 516, 549, 802
Hin1II CATG 7 cut(s) 150, 662, 919, 1164, 1300, 1473, 1478
Hin6I GCGC 4 cut(s) 23, 514, 547, 800
HinP1I GCGC 4 cut(s) 23, 514, 547, 800
HinfI GANTC 1 cut(s) 1118
HpaII CCGG 8 cut(s) 8, 29, 297, 315, 323, 337, 390, 612
HphI GGTGA 5 cut(s) 340, 749, 986, 1052, 1498
Hpy188I TCNGA 3 cut(s) 307, 1132, 1482
Hpy188III TCNNGA 3 cut(s) 568, 905, 1016
Hpy99I CGWCG 1 cut(s) 951
HpyAV CCTTC 8 cut(s) 178, 187, 662, 681, 721, 1147, 1286, 1526
HpyCH4III ACNGT 3 cut(s) 352, 1095, 1326
HpyCH4IV ACGT 2 cut(s) 16, 595
HpyCH4V TGCA 9 cut(s) 792, 821, 854, 899, 915, 1028, 1160, 1322, 1570
HpyF10VI GCNNNNNNNGC 8 cut(s) 259, 371, 380, 1018, 1166, 1175, 1567, 1576
HpyF3I CTNAG 5 cut(s) 55, 631, 752, 840, 888
HpySE526I ACGT 2 cut(s) 16, 595
Hsp92II CATG 7 cut(s) 150, 662, 919, 1164, 1300, 1473, 1478
HspAI GCGC 4 cut(s) 23, 514, 547, 800
KroI GCCGGC 1 cut(s) 322
KroNI GCCGGC 1 cut(s) 324
Ksp22I TGATCA 1 cut(s) 1477
Kzo9I GATC 6 cut(s) 812, 907, 1232, 1254, 1266, 1477
LmnI GCTCC 5 cut(s) 198, 308, 421, 700, 1018
Lsp1109I GCAGC 8 cut(s) 361, 805, 833, 866, 940, 1033, 1165, 1234
LweI GCATC 3 cut(s) 779, 853, 1037
MaeI CTAG 5 cut(s) 626, 1115, 1341, 1589, 1602
MaeII ACGT 2 cut(s) 16, 595
MaeIII GTNAC 5 cut(s) 346, 676, 755, 1089, 1551
MalI GATC 6 cut(s) 814, 909, 1234, 1256, 1268, 1479
MbiI CCGCTC 2 cut(s) 110, 1197
MboI GATC 6 cut(s) 812, 907, 1232, 1254, 1266, 1477
MboII GAAGA 6 cut(s) 145, 190, 839, 875, 977, 1318
MfeI CAATTG 1 cut(s) 681
MhlI GDGCHC 2 cut(s) 276, 872
MluCI AATT 4 cut(s) 162, 681, 877, 1574
MmeI TCCRAC 1 cut(s) 860
Mph1103I ATGCAT 2 cut(s) 794, 1162
MroNI GCCGGC 1 cut(s) 322
MseI TTAA 3 cut(s) 602, 777, 1062
MspA1I CMGCKG 2 cut(s) 818, 1178
MspI CCGG 8 cut(s) 8, 29, 297, 315, 323, 337, 390, 612
MspR9I CCNGG 5 cut(s) 297, 316, 338, 391, 1171
MunI CAATTG 1 cut(s) 681
MvaI CCWGG 1 cut(s) 1171
MvnI CGCG 1 cut(s) 35
MwoI GCNNNNNNNGC 8 cut(s) 259, 371, 380, 1018, 1166, 1175, 1567, 1576
NaeI GCCGGC 1 cut(s) 324
NciI CCSGG 4 cut(s) 297, 316, 338, 391
NcoI CCATGG 1 cut(s) 146
NdeII GATC 6 cut(s) 812, 907, 1232, 1254, 1266, 1477
NgoMIV GCCGGC 1 cut(s) 322
NheI GCTAGC 1 cut(s) 1601
NlaIII CATG 7 cut(s) 150, 662, 919, 1164, 1300, 1473, 1478
NlaIV GGNNCC 5 cut(s) 62, 304, 335, 394, 1335
NmuCI GTSAC 3 cut(s) 346, 755, 1551
NsiI ATGCAT 2 cut(s) 794, 1162
NspI RCATGY 1 cut(s) 1473
NspV TTCGAA 1 cut(s) 963
PaeI GCATGC 1 cut(s) 1473
PaeR7I CTCGAG 1 cut(s) 269
PaqCI CACCTGC 1 cut(s) 507
PcsI WCGNNNNNNNCGW 1 cut(s) 1428
PdiI GCCGGC 1 cut(s) 324
PfeI GAWTC 1 cut(s) 1118
PflFI GACNNNGTC 1 cut(s) 316
Psp124BI GAGCTC 1 cut(s) 276
Psp6I CCWGG 1 cut(s) 1169
PspEI GGTNACC 1 cut(s) 346
PspFI CCCAGC 2 cut(s) 189, 744
PspGI CCWGG 1 cut(s) 1169
PspN4I GGNNCC 5 cut(s) 62, 304, 335, 394, 1335
PspPI GGNCC 5 cut(s) 40, 334, 393, 1334, 1400
PspXI VCTCGAGB 1 cut(s) 269
PstI CTGCAG 1 cut(s) 823
PstNI CAGNNNCTG 1 cut(s) 1093
PsyI GACNNNGTC 1 cut(s) 316
PvuII CAGCTG 2 cut(s) 818, 1178
SacI GAGCTC 1 cut(s) 276
SaqAI TTAA 3 cut(s) 602, 777, 1062
Sau3AI GATC 6 cut(s) 812, 907, 1232, 1254, 1266, 1477
Sau96I GGNCC 5 cut(s) 40, 334, 393, 1334, 1400
ScrFI CCNGG 5 cut(s) 297, 316, 338, 391, 1171
SduI GDGCHC 2 cut(s) 276, 872
SfaNI GCATC 3 cut(s) 779, 853, 1037
SfcI CTRYAG 1 cut(s) 819
Sfr274I CTCGAG 1 cut(s) 269
SfuI TTCGAA 1 cut(s) 963
SinI GGWCC 3 cut(s) 40, 334, 393
SlaI CTCGAG 1 cut(s) 269
SmlI CTYRAG 4 cut(s) 257, 269, 1360, 1511
SmoI CTYRAG 4 cut(s) 257, 269, 1360, 1511
SphI GCATGC 1 cut(s) 1473
Sse9I AATT 4 cut(s) 162, 681, 877, 1574
SspMI CTAG 5 cut(s) 626, 1115, 1341, 1589, 1602
SstI GAGCTC 1 cut(s) 276
StyD4I CCNGG 5 cut(s) 295, 314, 336, 389, 1169
StyI CCWWGG 1 cut(s) 146
TaaI ACNGT 3 cut(s) 352, 1095, 1326
TaiI ACGT 2 cut(s) 19, 598
TaqI TCGA 6 cut(s) 270, 963, 1140, 1199, 1530, 1597
TaqII GACCGA 1 cut(s) 400
TasI AATT 4 cut(s) 162, 681, 877, 1574
TauI GCSGC 7 cut(s) 28, 303, 380, 383, 404, 805, 1012
TfiI GAWTC 1 cut(s) 1118
Tru1I TTAA 3 cut(s) 602, 777, 1062
Tru9I TTAA 3 cut(s) 602, 777, 1062
TscAI CASTG 4 cut(s) 249, 1191, 1269, 1498
TseFI GTSAC 3 cut(s) 346, 755, 1551
TseI GCWGC 8 cut(s) 374, 818, 821, 854, 953, 1021, 1178, 1247
Tsp45I GTSAC 3 cut(s) 346, 755, 1551
TspGWI ACGGA 2 cut(s) 385, 1220
TspRI CASTG 4 cut(s) 249, 1191, 1269, 1498
Tth111I GACNNNGTC 1 cut(s) 316
VpaK11BI GGWCC 3 cut(s) 40, 334, 393
XceI RCATGY 1 cut(s) 1473
XcmI CCANNNNNNNNNTGG 1 cut(s) 144
XhoI CTCGAG 1 cut(s) 269
XspI CTAG 5 cut(s) 626, 1115, 1341, 1589, 1602
Zsp2I ATGCAT 2 cut(s) 794, 1162
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.