Tonoplast dicarboxylate
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD10G1332700.v1.1 MD10G1333600.v1.1 |
| pyrus_communis | pycom10g28290 |
| rosa_laevigata | RLG00000025412 RLG00000025415 |
| rosa_roxburghii | Rroxscaffold_6G00424760 |
| rosa_samantha | Rh5BG013200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 117, 351, 924 |
| AccI | GTMKAC | 1 cut(s) | 480 |
| AciI | CCGC | 2 cut(s) | 648, 758 |
| AclWI | GGATC | 1 cut(s) | 506 |
| AcsI | RAATTY | 2 cut(s) | 661, 688 |
| AdeI | CACNNNGTG | 1 cut(s) | 514 |
| AfaI | GTAC | 4 cut(s) | 155, 287, 531, 930 |
| AgeI | ACCGGT | 1 cut(s) | 71 |
| AgsI | TTSAA | 4 cut(s) | 196, 659, 709, 949 |
| AjiI | CACGTC | 1 cut(s) | 522 |
| AleI | CACNNNNGTG | 1 cut(s) | 971 |
| AluBI | AGCT | 4 cut(s) | 12, 616, 823, 894 |
| AluI | AGCT | 4 cut(s) | 12, 616, 823, 894 |
| AlwI | GGATC | 1 cut(s) | 506 |
| ApoI | RAATTY | 2 cut(s) | 661, 688 |
| AseI | ATTAAT | 1 cut(s) | 419 |
| AsiGI | ACCGGT | 1 cut(s) | 71 |
| AsuHPI | GGTGA | 1 cut(s) | 225 |
| AsuII | TTCGAA | 1 cut(s) | 397 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 522, 554 |
| BccI | CCATC | 3 cut(s) | 245, 615, 795 |
| BceAI | ACGGC | 1 cut(s) | 896 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 236, 270, 857, 891 |
| BclI | TGATCA | 1 cut(s) | 561 |
| BfmI | CTRYAG | 1 cut(s) | 837 |
| BmgBI | CACGTC | 1 cut(s) | 522 |
| Bpu14I | TTCGAA | 1 cut(s) | 397 |
| BsaAI | YACGTR | 2 cut(s) | 29, 446 |
| BsaWI | WCCGGW | 1 cut(s) | 71 |
| BsaXI | ACNNNNNCTCC | 1 cut(s) | 26 |
| Bse118I | RCCGGY | 1 cut(s) | 71 |
| Bse1I | ACTGG | 1 cut(s) | 488 |
| BseGI | GGATG | 3 cut(s) | 581, 626, 787 |
| BseMII | CTCAG | 2 cut(s) | 630, 984 |
| BseNI | ACTGG | 1 cut(s) | 488 |
| BseYI | CCCAGC | 1 cut(s) | 616 |
| BshTI | ACCGGT | 1 cut(s) | 71 |
| BsiSI | CCGG | 1 cut(s) | 72 |
| BslFI | GGGAC | 1 cut(s) | 418 |
| BsmFI | GGGAC | 1 cut(s) | 418 |
| Bsp119I | TTCGAA | 1 cut(s) | 397 |
| Bsp143I | GATC | 2 cut(s) | 498, 561 |
| BspACI | CCGC | 2 cut(s) | 648, 758 |
| BspCNI | CTCAG | 2 cut(s) | 631, 983 |
| BspMAI | CTGCAG | 1 cut(s) | 841 |
| BspPI | GGATC | 1 cut(s) | 506 |
| BspT104I | TTCGAA | 1 cut(s) | 397 |
| BsrFI | RCCGGY | 1 cut(s) | 71 |
| BsrI | ACTGG | 1 cut(s) | 488 |
| BssAI | RCCGGY | 1 cut(s) | 71 |
| BssMI | GATC | 2 cut(s) | 498, 561 |
| BssNAI | GTATAC | 1 cut(s) | 481 |
| Bst1107I | GTATAC | 1 cut(s) | 481 |
| Bst4CI | ACNGT | 6 cut(s) | 50, 101, 132, 151, 278, 728 |
| BstBAI | YACGTR | 2 cut(s) | 29, 446 |
| BstBI | TTCGAA | 1 cut(s) | 397 |
| BstC8I | GCNNGC | 1 cut(s) | 506 |
| BstDEI | CTNAG | 2 cut(s) | 639, 970 |
| BstEII | GGTNACC | 1 cut(s) | 760 |
| BstF5I | GGATG | 3 cut(s) | 581, 626, 787 |
| BstKTI | GATC | 2 cut(s) | 501, 564 |
| BstMBI | GATC | 2 cut(s) | 498, 561 |
| BstNSI | RCATGY | 1 cut(s) | 247 |
| BstPI | GGTNACC | 1 cut(s) | 760 |
| BstSFI | CTRYAG | 1 cut(s) | 837 |
| BstSNI | TACGTA | 1 cut(s) | 29 |
| BstX2I | RGATCY | 1 cut(s) | 498 |
| BstYI | RGATCY | 1 cut(s) | 498 |
| BstZ17I | GTATAC | 1 cut(s) | 481 |
| BtrI | CACGTC | 1 cut(s) | 522 |
| BtsCI | GGATG | 3 cut(s) | 581, 626, 787 |
| BtsIMutI | CAGTG | 1 cut(s) | 978 |
| Cac8I | GCNNGC | 1 cut(s) | 506 |
| Cfr10I | RCCGGY | 1 cut(s) | 71 |
| Csp6I | GTAC | 4 cut(s) | 154, 286, 530, 929 |
| CspAI | ACCGGT | 1 cut(s) | 71 |
| CviAII | CATG | 4 cut(s) | 244, 525, 717, 862 |
| CviJI | RGCY | 6 cut(s) | 12, 616, 823, 834, 894, 905 |
| CviKI_1 | RGCY | 6 cut(s) | 12, 616, 823, 834, 894, 905 |
| CviQI | GTAC | 4 cut(s) | 154, 286, 530, 929 |
| DdeI | CTNAG | 2 cut(s) | 639, 970 |
| DpnI | GATC | 2 cut(s) | 500, 563 |
| DpnII | GATC | 2 cut(s) | 498, 561 |
| DraI | TTTAAA | 3 cut(s) | 127, 294, 687 |
| DraIII | CACNNNGTG | 1 cut(s) | 514 |
| EciI | GGCGGA | 1 cut(s) | 663 |
| Eco105I | TACGTA | 1 cut(s) | 29 |
| Eco91I | GGTNACC | 1 cut(s) | 760 |
| EcoO65I | GGTNACC | 1 cut(s) | 760 |
| EcoT22I | ATGCAT | 1 cut(s) | 249 |
| FaeI | CATG | 4 cut(s) | 247, 528, 720, 865 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 326, 358 |
| FaqI | GGGAC | 1 cut(s) | 418 |
| FatI | CATG | 4 cut(s) | 243, 524, 716, 861 |
| FauNDI | CATATG | 1 cut(s) | 358 |
| FbaI | TGATCA | 1 cut(s) | 561 |
| FblI | GTMKAC | 1 cut(s) | 480 |
| FokI | GGATG | 3 cut(s) | 568, 633, 774 |
| GsaI | CCCAGC | 1 cut(s) | 620 |
| HapII | CCGG | 1 cut(s) | 72 |
| Hin1II | CATG | 4 cut(s) | 247, 528, 720, 865 |
| HincII | GTYRAC | 1 cut(s) | 135 |
| HindII | GTYRAC | 1 cut(s) | 135 |
| HindIII | AAGCTT | 2 cut(s) | 821, 892 |
| HinfI | GANTC | 2 cut(s) | 635, 939 |
| HpaI | GTTAAC | 1 cut(s) | 135 |
| HpaII | CCGG | 1 cut(s) | 72 |
| HphI | GGTGA | 1 cut(s) | 225 |
| Hpy166II | GTNNAC | 6 cut(s) | 135, 154, 184, 302, 481, 801 |
| Hpy188I | TCNGA | 1 cut(s) | 640 |
| Hpy8I | GTNNAC | 6 cut(s) | 135, 154, 184, 302, 481, 801 |
| HpyCH4III | ACNGT | 6 cut(s) | 50, 101, 132, 151, 278, 728 |
| HpyCH4IV | ACGT | 4 cut(s) | 28, 445, 521, 927 |
| HpyCH4V | TGCA | 4 cut(s) | 93, 247, 508, 839 |
| HpyF3I | CTNAG | 2 cut(s) | 639, 970 |
| HpySE526I | ACGT | 4 cut(s) | 28, 445, 521, 927 |
| Hsp92II | CATG | 4 cut(s) | 247, 528, 720, 865 |
| Ksp22I | TGATCA | 1 cut(s) | 561 |
| KspAI | GTTAAC | 1 cut(s) | 135 |
| Kzo9I | GATC | 2 cut(s) | 498, 561 |
| LmnI | GCTCC | 2 cut(s) | 17, 457 |
| LpnPI | CCDG | 4 cut(s) | 85, 469, 602, 1021 |
| MaeII | ACGT | 4 cut(s) | 28, 445, 521, 927 |
| MaeIII | GTNAC | 5 cut(s) | 74, 446, 517, 751, 760 |
| MalI | GATC | 2 cut(s) | 500, 563 |
| MboI | GATC | 2 cut(s) | 498, 561 |
| MboII | GAAGA | 1 cut(s) | 530 |
| MflI | RGATCY | 1 cut(s) | 498 |
| MnlI | CCTC | 2 cut(s) | 596, 979 |
| Mph1103I | ATGCAT | 1 cut(s) | 249 |
| MslI | CAYNNNNRTG | 4 cut(s) | 149, 242, 421, 971 |
| MspI | CCGG | 1 cut(s) | 72 |
| NdeI | CATATG | 1 cut(s) | 358 |
| NdeII | GATC | 2 cut(s) | 498, 561 |
| NlaIII | CATG | 4 cut(s) | 247, 528, 720, 865 |
| NmuCI | GTSAC | 2 cut(s) | 446, 517 |
| NsiI | ATGCAT | 1 cut(s) | 249 |
| NspI | RCATGY | 1 cut(s) | 247 |
| NspV | TTCGAA | 1 cut(s) | 397 |
| OliI | CACNNNNGTG | 1 cut(s) | 971 |
| PfeI | GAWTC | 2 cut(s) | 635, 939 |
| PinAI | ACCGGT | 1 cut(s) | 71 |
| Ppu21I | YACGTR | 2 cut(s) | 29, 446 |
| PshBI | ATTAAT | 1 cut(s) | 419 |
| PsiI | TTATAA | 3 cut(s) | 117, 351, 924 |
| PspEI | GGTNACC | 1 cut(s) | 760 |
| PspFI | CCCAGC | 1 cut(s) | 616 |
| PstI | CTGCAG | 1 cut(s) | 841 |
| PsuI | RGATCY | 1 cut(s) | 498 |
| RsaI | GTAC | 4 cut(s) | 155, 287, 531, 930 |
| RsaNI | GTAC | 4 cut(s) | 154, 286, 530, 929 |
| RseI | CAYNNNNRTG | 4 cut(s) | 149, 242, 421, 971 |
| Sau3AI | GATC | 2 cut(s) | 498, 561 |
| SfcI | CTRYAG | 1 cut(s) | 837 |
| SfuI | TTCGAA | 1 cut(s) | 397 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 149, 242, 421, 971 |
| SnaBI | TACGTA | 1 cut(s) | 29 |
| SsiI | CCGC | 2 cut(s) | 648, 758 |
| TaaI | ACNGT | 6 cut(s) | 50, 101, 132, 151, 278, 728 |
| TaiI | ACGT | 4 cut(s) | 31, 448, 524, 930 |
| TaqI | TCGA | 1 cut(s) | 397 |
| TatI | WGTACW | 1 cut(s) | 285 |
| TfiI | GAWTC | 2 cut(s) | 635, 939 |
| TscAI | CASTG | 1 cut(s) | 978 |
| TseFI | GTSAC | 2 cut(s) | 446, 517 |
| Tsp45I | GTSAC | 2 cut(s) | 446, 517 |
| TspDTI | ATGAA | 4 cut(s) | 48, 570, 705, 878 |
| TspRI | CASTG | 1 cut(s) | 978 |
| VspI | ATTAAT | 1 cut(s) | 419 |
| XapI | RAATTY | 2 cut(s) | 661, 688 |
| XceI | RCATGY | 1 cut(s) | 247 |
| XmiI | GTMKAC | 1 cut(s) | 480 |
| Zsp2I | ATGCAT | 1 cut(s) | 249 |