pycom11g01840

Multiple C2 and transmembrane domain-containing protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
Physical Location & Seq
Reverse (-)
1565555 .. 1567114
1560 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1560 bp
ATGTTTGTTGCTGCTGAACCGTTTGAGGAACCGTTGTATCTTACTGTGGAAGATAGAGTGGGATCGATCAAAGATGAAATTTTGGGTAAGTGTGTGATTGCTTTACAGACTGTGCAGAGGAGGTTAGACCATAAACCTGTGCACACTAGGTGGTTTAATCTTGAGAAGCATATGATCGTAGACGGGGAACAGAAGAGGGAGATCAAATTTTCCAGCAGGATTCATTTACGGATTTGCTTGGATGGCGGGTACCATGTCTTGGATGAATCAACACACTACAGTAGTGATCTCAGGCCAACAGCAAAGCAGTTGTGGAAGTCGAGCATTGGGATTTTTGAGGTAGGGGTTATAAGCGCAGTTGGTTTGATGCCAATGAAAACAAAAGATGGCCGAGGTACCACAGATGCTTATTGTGTAGCAAAATACGGGCAGAAATGGGTTCGCACAAGGACAATCGTGGACAGCTTCAATCCCAAGTGGAATGAGCAGTACATCTGGGAGGTTTTCGACCCGTGTACTGTCATTACAATTGGGGTTTTTGACAATGGTCATATACATGGAGGTGATAAAGGGGGAAAGGATTCAAGAATTGGCAAAGTGAGAATTCGGCTATCTACACTTGAAGCTGACAGGGTTTACACACATTCGTACCCTCTTCTGGTCCTACATCCATCTGGGGTGAAGAAAATGGGTGAAATTCAGTTGGCAGTGAGGTTTACATGCTCATCTTTGATTAATATGCTATATATGTATTCGCGTCCTTTGTTGCCAAAAATGCATTACATTCATCCATTGTCCGTGATTCAGCTCGATAGCTTGAGGCACCAGGCTATGCAGATTGTCTCAATGAGGCTGAACCGGGCTGAGCCCCCACTGAGGAAAGAGGTTGTGGAGTATATGTTGGATGTTGATTCACATATGTGGAGCATGAGAAGAAGCAAGGCAAATTTTTTCCGAATAATGGGAGTTTTAAGCGGGGTGATTGCAGTAGGAAAATGGCTTGATCAAATCTGCAATTGGAAGAATCCTCTCACAACCATTTTAATTCATATCCTCTTTATTATATTGGTTCTTTATCCAGAACTAATTCTTCCAACTATTTTTCTCTACCTATTCTTGATTGGAATTTGGAACTACCGATGGAGGCCGAGGCACCCTCCTCACATGGACACACGGCTATCTCATGCTGATGCTGCTCATCCTGACGAACGAGATGAAGAGTTTGACACGTTCCCAACTTCCCGGCCATCAGATATTGTGAGGATGAGATATGATCGACTAAGAAGCATAGCAGGGAGGGTTCAGACTGTTGTCGGTGATCTGGCAACTCAAGGCGAAAGGTTTCAGTCTCTTCTGAGTTGGAGAGACCCTAGAGCCACAACCCTGTTCGTAACTTTCTGTTTGATTGCTGCCATTGTTCTCTACGTAACTCCATTCCAAGTTGTGGCCCTTCTAGCAGGCATTTACGTGTTAAGGCATCCCAGATTCCGCCACAAACTTCCTTCGGTGCCGCTCAACTTCTTTAGGAGGTTGCCTGCAAGATCAGACAGCATGCTATAA

Protein Analysis

520

Amino Acids

60.05

Weight (kDa)

9.52

Isoelectric Point (pI)

46.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C2 PF00168 111 - 219 8.9e-22 C2 domain
Pex24p PF06398 336 - 499 2.7e-07 Integral peroxisomal membrane peroxin
PRT_C PF08372 364 - 519 1.1e-81 Plant phosphoribosyltransferase C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 350
Acc65I GGTACC 2 cut(s) 249, 395
AccB1I GGYRCC 5 cut(s) 249, 395, 822, 1152, 1507
AccB7I CCANNNNNTGG 2 cut(s) 259, 1444
AccBSI CCGCTC 1 cut(s) 1513
AccI GTMKAC 1 cut(s) 180
AccII CGCG 1 cut(s) 757
AciI CCGC 4 cut(s) 246, 975, 1489, 1511
AclWI GGATC 1 cut(s) 70
AcoI YGGCCR 2 cut(s) 388, 1244
AcsI RAATTY 6 cut(s) 78, 206, 603, 696, 946, 1125
AdeI CACNNNGTG 1 cut(s) 150
AfaI GTAC 5 cut(s) 251, 397, 491, 517, 650
AfiI CCNNNNNNNGG 5 cut(s) 259, 658, 876, 961, 1444
AflIII ACRYGT 2 cut(s) 1227, 1467
AgsI TTSAA 3 cut(s) 469, 585, 623
AjnI CCWGG 1 cut(s) 825
AleI CACNNNNGTG 1 cut(s) 919
AluBI AGCT 4 cut(s) 465, 626, 808, 816
AluI AGCT 4 cut(s) 465, 626, 808, 816
Alw21I GWGCWC 1 cut(s) 144
Alw26I GTCTC 3 cut(s) 847, 1353, 1359
Alw44I GTGCAC 1 cut(s) 140
AlwI GGATC 1 cut(s) 70
AoxI GGCC 5 cut(s) 293, 388, 1145, 1244, 1446
ApaLI GTGCAC 1 cut(s) 140
ApeKI GCWGC 3 cut(s) 11, 1193, 1409
ApoI RAATTY 6 cut(s) 78, 206, 603, 696, 946, 1125
AseI ATTAAT 1 cut(s) 735
Asp700I GAANNNNTTC 3 cut(s) 580, 1086, 1341
Asp718I GGTACC 2 cut(s) 249, 395
AspLEI GCGC 1 cut(s) 356
AspS9I GGNCC 2 cut(s) 661, 1447
AsuC2I CCSGG 2 cut(s) 860, 1243
AsuHPI GGTGA 5 cut(s) 575, 691, 704, 991, 1328
AvaII GGWCC 1 cut(s) 661
BaeGI GKGCMC 1 cut(s) 144
BaeI ACNNNNGTAYC 4 cut(s) 20, 53, 632, 665
BanI GGYRCC 5 cut(s) 249, 395, 822, 1152, 1507
BanII GRGCYC 1 cut(s) 870
Bbv12I GWGCWC 1 cut(s) 144
BbvI GCAGC 2 cut(s) 1180, 1396
BccI CCATC 5 cut(s) 236, 380, 679, 1134, 1255
BceAI ACGGC 1 cut(s) 1190
BciT130I CCWGG 1 cut(s) 827
BclI TGATCA 1 cut(s) 1003
BcnI CCSGG 2 cut(s) 860, 1243
BcoDI GTCTC 3 cut(s) 847, 1353, 1359
BfaI CTAG 3 cut(s) 147, 1371, 1454
BfmI CTRYAG 1 cut(s) 277
BisI GCNGC 4 cut(s) 12, 1194, 1410, 1511
BlpI GCTNAGC 1 cut(s) 864
BlsI GCNGC 4 cut(s) 13, 1195, 1411, 1512
Bme1390I CCNGG 3 cut(s) 827, 860, 1243
Bme18I GGWCC 1 cut(s) 661
BmgT120I GGNCC 2 cut(s) 661, 1447
BmiI GGNNCC 6 cut(s) 30, 251, 397, 824, 1154, 1509
BmrFI CCNGG 3 cut(s) 827, 860, 1243
BmsI GCATC 4 cut(s) 357, 394, 1180, 1486
BoxI GACNNNNGTC 2 cut(s) 546, 1310
BplI GAGNNNNNCTC 2 cut(s) 1141, 1173
Bpu1102I GCTNAGC 1 cut(s) 864
BpuEI CTTGAG 3 cut(s) 182, 838, 1314
BpuMI CCSGG 2 cut(s) 860, 1243
Bsa29I ATCGAT 1 cut(s) 65
BsaAI YACGTR 2 cut(s) 1426, 1468
BsaI GGTCTC 1 cut(s) 1359
BsaJI CCNNGG 2 cut(s) 391, 1148
BsaXI ACNNNNNCTCC 2 cut(s) 884, 914
Bsc4I CCNNNNNNNGG 5 cut(s) 259, 658, 876, 961, 1444
BseBI CCWGG 1 cut(s) 827
BseCI ATCGAT 1 cut(s) 65
BseDI CCNNGG 2 cut(s) 391, 1148
BseGI GGATG 8 cut(s) 247, 268, 667, 787, 910, 1198, 1269, 1477
BseLI CCNNNNNNNGG 5 cut(s) 259, 658, 876, 961, 1444
BseMII CTCAG 4 cut(s) 304, 855, 866, 1346
BseRI GAGGAG 2 cut(s) 133, 1149
BseSI GKGCMC 1 cut(s) 144
BseXI GCAGC 2 cut(s) 1180, 1396
BsgI GTGCAG 1 cut(s) 134
Bsh1236I CGCG 1 cut(s) 757
BshFI GGCC 5 cut(s) 295, 390, 1147, 1246, 1448
BshNI GGYRCC 5 cut(s) 249, 395, 822, 1152, 1507
BshVI ATCGAT 1 cut(s) 65
BsiHKAI GWGCWC 1 cut(s) 144
BsiSI CCGG 2 cut(s) 859, 1243
BslI CCNNNNNNNGG 5 cut(s) 259, 658, 876, 961, 1444
BsmAI GTCTC 3 cut(s) 847, 1353, 1359
BsnI GGCC 5 cut(s) 295, 390, 1147, 1246, 1448
Bso31I GGTCTC 1 cut(s) 1359
Bsp1286I GDGCHC 2 cut(s) 144, 870
Bsp143I GATC 9 cut(s) 62, 66, 174, 201, 286, 1003, 1273, 1318, 1541
Bsp1720I GCTNAGC 1 cut(s) 864
BspACI CCGC 4 cut(s) 246, 975, 1489, 1511
BspANI GGCC 5 cut(s) 295, 390, 1147, 1246, 1448
BspCNI CTCAG 4 cut(s) 303, 856, 867, 1347
BspDI ATCGAT 1 cut(s) 65
BspFNI CGCG 1 cut(s) 757
BspLI GGNNCC 6 cut(s) 30, 251, 397, 824, 1154, 1509
BspPI GGATC 1 cut(s) 70
BspT107I GGYRCC 5 cut(s) 249, 395, 822, 1152, 1507
BspTNI GGTCTC 1 cut(s) 1359
BsrBI CCGCTC 1 cut(s) 1513
BssECI CCNNGG 2 cut(s) 391, 1148
BssMI GATC 9 cut(s) 62, 66, 174, 201, 286, 1003, 1273, 1318, 1541
Bst2UI CCWGG 1 cut(s) 827
Bst4CI ACNGT 7 cut(s) 21, 33, 46, 112, 281, 520, 1309
Bst6I CTCTTC 4 cut(s) 188, 660, 1212, 1356
BstBAI YACGTR 2 cut(s) 1426, 1468
BstC8I GCNNGC 3 cut(s) 1459, 1536, 1553
BstDEI CTNAG 5 cut(s) 290, 864, 875, 1280, 1355
BstF5I GGATG 8 cut(s) 247, 268, 667, 787, 910, 1198, 1269, 1477
BstFNI CGCG 1 cut(s) 757
BstHHI GCGC 1 cut(s) 356
BstKTI GATC 9 cut(s) 65, 69, 177, 204, 289, 1006, 1276, 1321, 1544
BstMAI GTCTC 3 cut(s) 847, 1353, 1359
BstMBI GATC 9 cut(s) 62, 66, 174, 201, 286, 1003, 1273, 1318, 1541
BstMWI GCNNNNNNNGC 4 cut(s) 243, 775, 1193, 1454
BstNI CCWGG 1 cut(s) 827
BstNSI RCATGY 2 cut(s) 723, 1555
BstPAI GACNNNNGTC 2 cut(s) 546, 1310
BstSCI CCNGG 3 cut(s) 825, 858, 1241
BstSFI CTRYAG 1 cut(s) 277
BstSLI GKGCMC 1 cut(s) 144
BstSNI TACGTA 1 cut(s) 1426
BstUI CGCG 1 cut(s) 757
BstV1I GCAGC 2 cut(s) 1180, 1396
Bsu15I ATCGAT 1 cut(s) 65
BsuRI GGCC 5 cut(s) 295, 390, 1147, 1246, 1448
BsuTUI ATCGAT 1 cut(s) 65
BtsCI GGATG 8 cut(s) 247, 268, 667, 787, 910, 1198, 1269, 1477
BtsI GCAGTG 1 cut(s) 714
BtsIMutI CAGTG 2 cut(s) 714, 872
Cac8I GCNNGC 3 cut(s) 1459, 1536, 1553
CfoI GCGC 1 cut(s) 356
Cfr13I GGNCC 2 cut(s) 661, 1447
ClaI ATCGAT 1 cut(s) 65
CseI GACGC 1 cut(s) 746
Csp6I GTAC 5 cut(s) 250, 396, 490, 516, 649
CviAII CATG 7 cut(s) 254, 557, 720, 928, 1165, 1184, 1552
CviQI GTAC 5 cut(s) 250, 396, 490, 516, 649
DdeI CTNAG 5 cut(s) 290, 864, 875, 1280, 1355
DpnI GATC 9 cut(s) 64, 68, 176, 203, 288, 1005, 1275, 1320, 1543
DpnII GATC 9 cut(s) 62, 66, 174, 201, 286, 1003, 1273, 1318, 1541
DraIII CACNNNGTG 1 cut(s) 150
EaeI YGGCCR 2 cut(s) 388, 1244
Eam1104I CTCTTC 4 cut(s) 188, 660, 1212, 1356
EarI CTCTTC 4 cut(s) 188, 660, 1212, 1356
EciI GGCGGA 1 cut(s) 1478
Eco105I TACGTA 1 cut(s) 1426
Eco24I GRGCYC 1 cut(s) 870
Eco31I GGTCTC 1 cut(s) 1359
Eco47I GGWCC 1 cut(s) 661
EcoRI GAATTC 1 cut(s) 603
EcoRII CCWGG 1 cut(s) 825
EcoT22I ATGCAT 1 cut(s) 780
EcoT38I GRGCYC 1 cut(s) 870
FaeI CATG 7 cut(s) 257, 560, 723, 931, 1168, 1187, 1555
FatI CATG 7 cut(s) 253, 556, 719, 927, 1164, 1183, 1551
FauI CCCGC 2 cut(s) 239, 968
FauNDI CATATG 2 cut(s) 171, 918
FbaI TGATCA 1 cut(s) 1003
FblI GTMKAC 1 cut(s) 180
Fnu4HI GCNGC 4 cut(s) 12, 1194, 1410, 1511
FokI GGATG 8 cut(s) 254, 275, 654, 774, 917, 1185, 1276, 1464
FriOI GRGCYC 1 cut(s) 870
Fsp4HI GCNGC 4 cut(s) 12, 1194, 1410, 1511
FspBI CTAG 3 cut(s) 147, 1371, 1454
GlaI GCGC 1 cut(s) 355
GluI GCNGC 4 cut(s) 12, 1194, 1410, 1511
HaeIII GGCC 5 cut(s) 295, 390, 1147, 1246, 1448
HapII CCGG 2 cut(s) 859, 1243
HgaI GACGC 1 cut(s) 746
HhaI GCGC 1 cut(s) 356
Hin1II CATG 7 cut(s) 257, 560, 723, 931, 1168, 1187, 1555
Hin6I GCGC 1 cut(s) 354
HinP1I GCGC 1 cut(s) 354
HinfI GANTC 7 cut(s) 220, 266, 581, 802, 911, 1024, 1485
HpaII CCGG 2 cut(s) 859, 1243
HphI GGTGA 5 cut(s) 575, 691, 704, 991, 1328
Hpy166II GTNNAC 6 cut(s) 142, 181, 460, 516, 637, 717
Hpy188I TCNGA 5 cut(s) 956, 1252, 1305, 1356, 1546
Hpy188III TCNNGA 5 cut(s) 161, 585, 1079, 1117, 1202
Hpy8I GTNNAC 6 cut(s) 142, 181, 460, 516, 637, 717
HpyAV CCTTC 2 cut(s) 1460, 1512
HpyCH4III ACNGT 7 cut(s) 21, 33, 46, 112, 281, 520, 1309
HpyCH4IV ACGT 3 cut(s) 1229, 1425, 1467
HpyCH4V TGCA 7 cut(s) 115, 142, 778, 835, 986, 1014, 1538
HpyF10VI GCNNNNNNNGC 4 cut(s) 243, 775, 1193, 1454
HpyF3I CTNAG 5 cut(s) 290, 864, 875, 1280, 1355
HpySE526I ACGT 3 cut(s) 1229, 1425, 1467
Hsp92II CATG 7 cut(s) 257, 560, 723, 931, 1168, 1187, 1555
HspAI GCGC 1 cut(s) 354
KpnI GGTACC 2 cut(s) 253, 399
Ksp22I TGATCA 1 cut(s) 1003
Kzo9I GATC 9 cut(s) 62, 66, 174, 201, 286, 1003, 1273, 1318, 1541
LmnI GCTCC 1 cut(s) 924
Lsp1109I GCAGC 2 cut(s) 1180, 1396
LweI GCATC 4 cut(s) 357, 394, 1180, 1486
MaeI CTAG 3 cut(s) 147, 1371, 1454
MaeII ACGT 3 cut(s) 1229, 1425, 1467
MaeIII GTNAC 2 cut(s) 1390, 1426
MalI GATC 9 cut(s) 64, 68, 176, 203, 288, 1005, 1275, 1320, 1543
MbiI CCGCTC 1 cut(s) 1513
MboI GATC 9 cut(s) 62, 66, 174, 201, 286, 1003, 1273, 1318, 1541
MboII GAAGA 9 cut(s) 62, 205, 647, 694, 945, 1033, 1082, 1229, 1343
MfeI CAATTG 2 cut(s) 528, 1015
MhlI GDGCHC 2 cut(s) 144, 870
MmeI TCCRAC 3 cut(s) 882, 1118, 1340
Mph1103I ATGCAT 1 cut(s) 780
MroXI GAANNNNTTC 3 cut(s) 580, 1086, 1341
MseI TTAA 5 cut(s) 156, 735, 971, 1043, 1472
MslI CAYNNNNRTG 5 cut(s) 555, 561, 919, 1188, 1466
MspI CCGG 2 cut(s) 859, 1243
MspR9I CCNGG 3 cut(s) 827, 860, 1243
MunI CAATTG 2 cut(s) 528, 1015
MvaI CCWGG 1 cut(s) 827
MvnI CGCG 1 cut(s) 757
MwoI GCNNNNNNNGC 4 cut(s) 243, 775, 1193, 1454
NciI CCSGG 2 cut(s) 860, 1243
NdeI CATATG 2 cut(s) 171, 918
NdeII GATC 9 cut(s) 62, 66, 174, 201, 286, 1003, 1273, 1318, 1541
NlaIII CATG 7 cut(s) 257, 560, 723, 931, 1168, 1187, 1555
NlaIV GGNNCC 6 cut(s) 30, 251, 397, 824, 1154, 1509
NmeAIII GCCGAG 2 cut(s) 416, 1173
NsiI ATGCAT 1 cut(s) 780
NspI RCATGY 2 cut(s) 723, 1555
OliI CACNNNNGTG 1 cut(s) 919
PaeI GCATGC 1 cut(s) 1555
PdmI GAANNNNTTC 3 cut(s) 580, 1086, 1341
PfeI GAWTC 7 cut(s) 220, 266, 581, 802, 911, 1024, 1485
PflMI CCANNNNNTGG 2 cut(s) 259, 1444
PkrI GCNGC 4 cut(s) 13, 1195, 1411, 1512
Ppu21I YACGTR 2 cut(s) 1426, 1468
PshAI GACNNNNGTC 2 cut(s) 546, 1310
PshBI ATTAAT 1 cut(s) 735
PsiI TTATAA 1 cut(s) 350
Psp6I CCWGG 1 cut(s) 825
PspGI CCWGG 1 cut(s) 825
PspN4I GGNNCC 6 cut(s) 30, 251, 397, 824, 1154, 1509
PspPI GGNCC 2 cut(s) 661, 1447
RsaI GTAC 5 cut(s) 251, 397, 491, 517, 650
RsaNI GTAC 5 cut(s) 250, 396, 490, 516, 649
RseI CAYNNNNRTG 5 cut(s) 555, 561, 919, 1188, 1466
SaqAI TTAA 5 cut(s) 156, 735, 971, 1043, 1472
SatI GCNGC 4 cut(s) 12, 1194, 1410, 1511
Sau3AI GATC 9 cut(s) 62, 66, 174, 201, 286, 1003, 1273, 1318, 1541
Sau96I GGNCC 2 cut(s) 661, 1447
ScrFI CCNGG 3 cut(s) 827, 860, 1243
SduI GDGCHC 2 cut(s) 144, 870
SfaNI GCATC 4 cut(s) 357, 394, 1180, 1486
SfcI CTRYAG 1 cut(s) 277
SinI GGWCC 1 cut(s) 661
SmiMI CAYNNNNRTG 5 cut(s) 555, 561, 919, 1188, 1466
SmlI CTYRAG 3 cut(s) 161, 817, 1329
SmoI CTYRAG 3 cut(s) 161, 817, 1329
SnaBI TACGTA 1 cut(s) 1426
SphI GCATGC 1 cut(s) 1555
SsiI CCGC 4 cut(s) 246, 975, 1489, 1511
SspMI CTAG 3 cut(s) 147, 1371, 1454
StyD4I CCNGG 3 cut(s) 825, 858, 1241
TaaI ACNGT 7 cut(s) 21, 33, 46, 112, 281, 520, 1309
TaiI ACGT 3 cut(s) 1232, 1428, 1470
TaqI TCGA 5 cut(s) 65, 320, 507, 810, 1276
TatI WGTACW 2 cut(s) 489, 515
TauI GCSGC 1 cut(s) 1513
TfiI GAWTC 7 cut(s) 220, 266, 581, 802, 911, 1024, 1485
Tru1I TTAA 5 cut(s) 156, 735, 971, 1043, 1472
Tru9I TTAA 5 cut(s) 156, 735, 971, 1043, 1472
TscAI CASTG 2 cut(s) 714, 879
TseI GCWGC 3 cut(s) 11, 1193, 1409
TspDTI ATGAA 7 cut(s) 90, 212, 279, 389, 776, 1037, 1230
TspGWI ACGGA 2 cut(s) 244, 787
TspRI CASTG 2 cut(s) 714, 879
Van91I CCANNNNNTGG 2 cut(s) 259, 1444
VneI GTGCAC 1 cut(s) 140
VpaK11BI GGWCC 1 cut(s) 661
VspI ATTAAT 1 cut(s) 735
XapI RAATTY 6 cut(s) 78, 206, 603, 696, 946, 1125
XceI RCATGY 2 cut(s) 723, 1555
XmiI GTMKAC 1 cut(s) 180
XmnI GAANNNNTTC 3 cut(s) 580, 1086, 1341
XspI CTAG 3 cut(s) 147, 1371, 1454
Zsp2I ATGCAT 1 cut(s) 780
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.