Rmu_co8493933.1_g000001

Multiple C2 and transmembrane domain-containing protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8493933.1
Physical Location & Seq
Reverse (-)
2 .. 1811
1810 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8493933.1_g000001.1.cds

Sequence Viewer

Length: 1810 bp
atgcagaagcctccgcagtctcaagattttgctttgaaagagacctcgcccaacattggagcggggtcggtcacaggtgacaagctctcatgcacctatgaccttgttgagcagatgcaatacctttatgtccgggtggttaaagcaaaggatttacctgcaaaagatgtaactggtagttgtgatccctatgttgaagtgaaacttggtaactacaagggagtcactaagcatttcgagaagaagtctaaccctgtatggaatcaagtgtttgctttctccaaagatcgaattcaagcttcgattttggaagctgtggtgaaagacaaggatgttgtggtggatgatttcatgggaagggttatatttgaactaaatgacataccgaaacgcattccacctgacagccctttggcaccacagtggtataggctggatgatcgaaaaggtgatagggtgaagggagagctgatgttggcagtttggatgggaactcaagcagatgaagcatttcctgatgcttggcattcagatgctgcaacagttgggcccgaaggtgtgaataacattcgatcgaaggtgtatctctcccctaagctttggtatgtgagggtcaatgtaattgaagctcaggacttgttgcctactgacaagagtaggtaccccgaagtttttgtgaaagttatctatgggaatcaggcattgaggactagaatatcacagagtaaaagtatcaatccaatgtggaatgaggatttgatgtttgtcgctgctgaaccgtttgaagaacctttatttttgactgtggaagatagagtgggatcaggcaaagatgaagtcttggggaagtgtgtcattgctttacagaatgtgcagaggaggttggaccataaacctgtgaacacaaggtggtataatctagagaagcatacaattgtagatggggaacagaagaaggagattaagtttgcaagcaggattcatttaagggtttgtttggatggcgggtatcatgttctggatgagtcgacacactacagtagtgatcttaggccaacagcaaagcagttgtggaaaccgagcattgggatttttgagctaggggttatcagtgcagtgggactgatgccaatgaaggcgaaagatagccgaggaaccacagatgcttattgtgtagctaaatatgggcagaaatgggttcgaacaaggacaattgtggacagcctgtctcccaaatggaatgagcagtacacgtgggaggttttcgacccgtgtactgtcatttcaattggggtttttgacaatggtcatatacatgggggtgataaagggggaaaggattcaagaattgggaaagtaaggattcggctatctacacttgaagctgacagggtttacacacattcctatcctcttcttgtcctgcagccttccggggtgaagaaaatgggtgaaattcaactggcagtgaggtttacatgctcatctttggttaatatgttgcacatgtattcgcatcctttattgccaaaaatgcactacattcatccattgtctgtaattcagctagatagcttgaggcaccaggctatgcagattgtctcaatgaggctcaatcgggctgagccaccactgaggaaagaggtggtggagtatatgctagatgttgattcgcatatgtggagcatgagaagaagcaaggctaattttttcagaataatgggagtattaagtggggtgattgcagtaggaaaatggctcgatcaaatctgcaactggaagaatcctcttacaaccattttgattcatg

Protein Analysis

603

Amino Acids

68.62

Weight (kDa)

8.93

Isoelectric Point (pI)

40.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 166
Acc65I GGTACC 1 cut(s) 660
AccB1I GGYRCC 3 cut(s) 415, 660, 1581
AccBSI CCGCTC 1 cut(s) 62
AccI GTMKAC 1 cut(s) 1028
AciI CCGC 3 cut(s) 14, 62, 1005
AclWI GGATC 2 cut(s) 179, 829
AcsI RAATTY 2 cut(s) 291, 1455
AcvI CACGTG 1 cut(s) 1254
AdeI CACNNNGTG 1 cut(s) 909
AfaI GTAC 3 cut(s) 662, 1250, 1276
AfiI CCNNNNNNNGG 2 cut(s) 56, 1085
AflIII ACRYGT 2 cut(s) 1251, 1506
AhdI GACNNNNNGTC 1 cut(s) 1225
AjnI CCWGG 1 cut(s) 1584
AjuI GAANNNNNNNTTGG 2 cut(s) 189, 221
AleI CACNNNNGTG 1 cut(s) 421
Alw26I GTCTC 4 cut(s) 24, 35, 1233, 1606
AlwI GGATC 2 cut(s) 179, 829
AlwNI CAGNNNCTG 1 cut(s) 536
AoxI GGCC 2 cut(s) 548, 1052
ApaI GGGCCC 1 cut(s) 552
ApeKI GCWGC 3 cut(s) 536, 770, 1426
ApoI RAATTY 2 cut(s) 291, 1455
ArsI GACNNNNNNTTYG 2 cut(s) 822, 854
Asp700I GAANNNNTTC 2 cut(s) 510, 1339
Asp718I GGTACC 1 cut(s) 660
AspS9I GGNCC 3 cut(s) 548, 549, 886
AsuC2I CCSGG 2 cut(s) 134, 1435
AsuHPI GGTGA 8 cut(s) 89, 331, 461, 469, 1334, 1450, 1463, 1750
AsuII TTCGAA 1 cut(s) 1201
AvaII GGWCC 1 cut(s) 886
BaeGI GKGCMC 1 cut(s) 552
BanI GGYRCC 3 cut(s) 415, 660, 1581
BanII GRGCYC 1 cut(s) 552
BbrPI CACGTG 1 cut(s) 1254
BbvI GCAGC 3 cut(s) 523, 757, 1438
BccI CCATC 3 cut(s) 481, 935, 995
BciT130I CCWGG 1 cut(s) 1586
BcnI CCSGG 2 cut(s) 134, 1435
BcoDI GTCTC 4 cut(s) 24, 35, 1233, 1606
BfaI CTAG 5 cut(s) 711, 920, 1100, 1568, 1661
BfmI CTRYAG 2 cut(s) 1036, 1424
BfuAI ACCTGC 1 cut(s) 166
BisI GCNGC 3 cut(s) 537, 771, 1427
BlpI GCTNAGC 1 cut(s) 1623
BlsI GCNGC 3 cut(s) 538, 772, 1428
Bme1390I CCNGG 3 cut(s) 134, 1435, 1586
Bme18I GGWCC 1 cut(s) 886
BmeRI GACNNNNNGTC 1 cut(s) 1225
BmgT120I GGNCC 3 cut(s) 548, 549, 886
BmiI GGNNCC 5 cut(s) 417, 550, 662, 1156, 1583
BmrFI CCNGG 3 cut(s) 134, 1435, 1586
BmsI GCATC 6 cut(s) 105, 508, 523, 1116, 1153, 1525
BoxI GACNNNNGTC 1 cut(s) 1305
Bpu10I CCTNAGC 2 cut(s) 594, 630
Bpu1102I GCTNAGC 1 cut(s) 1623
Bpu14I TTCGAA 1 cut(s) 1201
BpuEI CTTGAG 3 cut(s) 6, 480, 1597
BpuMI CCSGG 2 cut(s) 134, 1435
BsaAI YACGTR 1 cut(s) 1254
BsaI GGTCTC 1 cut(s) 35
BsaJI CCNNGG 2 cut(s) 1150, 1434
BsaXI ACNNNNNCTCC 2 cut(s) 950, 980
Bsc4I CCNNNNNNNGG 2 cut(s) 56, 1085
Bse1I ACTGG 3 cut(s) 178, 1467, 1781
Bse3DI GCAATG 1 cut(s) 855
BseBI CCWGG 1 cut(s) 1586
BseDI CCNNGG 2 cut(s) 1150, 1434
BseGI GGATG 8 cut(s) 337, 349, 442, 492, 1006, 1027, 1516, 1546
BseLI CCNNNNNNNGG 2 cut(s) 56, 1085
BseMI GCAATG 1 cut(s) 855
BseMII CTCAG 3 cut(s) 644, 1614, 1625
BseNI ACTGG 3 cut(s) 178, 1467, 1781
BseRI GAGGAG 1 cut(s) 892
BseSI GKGCMC 1 cut(s) 552
BseXI GCAGC 3 cut(s) 523, 757, 1438
BsgI GTGCAG 2 cut(s) 893, 1134
Bsh1285I CGRYCG 1 cut(s) 575
BshFI GGCC 2 cut(s) 550, 1054
BshNI GGYRCC 3 cut(s) 415, 660, 1581
BsiEI CGRYCG 1 cut(s) 575
BsiSI CCGG 2 cut(s) 133, 1434
BslFI GGGAC 1 cut(s) 1134
BslI CCNNNNNNNGG 2 cut(s) 56, 1085
BsmAI GTCTC 4 cut(s) 24, 35, 1233, 1606
BsmFI GGGAC 1 cut(s) 1134
BsmI GAATGC 2 cut(s) 393, 526
BsnI GGCC 2 cut(s) 550, 1054
Bso31I GGTCTC 1 cut(s) 35
Bsp119I TTCGAA 1 cut(s) 1201
Bsp120I GGGCCC 1 cut(s) 548
Bsp1286I GDGCHC 1 cut(s) 552
Bsp143I GATC 7 cut(s) 184, 286, 439, 572, 821, 1045, 1762
Bsp1720I GCTNAGC 1 cut(s) 1623
BspACI CCGC 3 cut(s) 14, 62, 1005
BspANI GGCC 2 cut(s) 550, 1054
BspCNI CTCAG 3 cut(s) 643, 1615, 1626
BspLI GGNNCC 5 cut(s) 417, 550, 662, 1156, 1583
BspMAI CTGCAG 1 cut(s) 1428
BspMI ACCTGC 1 cut(s) 166
BspPI GGATC 2 cut(s) 179, 829
BspT104I TTCGAA 1 cut(s) 1201
BspT107I GGYRCC 3 cut(s) 415, 660, 1581
BspTNI GGTCTC 1 cut(s) 35
BsrBI CCGCTC 1 cut(s) 62
BsrDI GCAATG 1 cut(s) 855
BsrI ACTGG 3 cut(s) 178, 1467, 1781
BssECI CCNNGG 2 cut(s) 1150, 1434
BssMI GATC 7 cut(s) 184, 286, 439, 572, 821, 1045, 1762
Bst2UI CCWGG 1 cut(s) 1586
Bst4CI ACNGT 6 cut(s) 423, 544, 780, 805, 1040, 1279
Bst6I CTCTTC 1 cut(s) 1419
BstBAI YACGTR 1 cut(s) 1254
BstBI TTCGAA 1 cut(s) 1201
BstC8I GCNNGC 1 cut(s) 973
BstDEI CTNAG 6 cut(s) 228, 594, 630, 1049, 1623, 1634
BstF5I GGATG 8 cut(s) 337, 349, 442, 492, 1006, 1027, 1516, 1546
BstKTI GATC 7 cut(s) 187, 289, 442, 575, 824, 1048, 1765
BstMAI GTCTC 4 cut(s) 24, 35, 1233, 1606
BstMBI GATC 7 cut(s) 184, 286, 439, 572, 821, 1045, 1762
BstMCI CGRYCG 1 cut(s) 575
BstMWI GCNNNNNNNGC 2 cut(s) 506, 1534
BstNI CCWGG 1 cut(s) 1586
BstNSI RCATGY 2 cut(s) 1482, 1510
BstPAI GACNNNNGTC 1 cut(s) 1305
BstSCI CCNGG 3 cut(s) 132, 1433, 1584
BstSFI CTRYAG 2 cut(s) 1036, 1424
BstSLI GKGCMC 1 cut(s) 552
BstV1I GCAGC 3 cut(s) 523, 757, 1438
BsuRI GGCC 2 cut(s) 550, 1054
BtsCI GGATG 8 cut(s) 337, 349, 442, 492, 1006, 1027, 1516, 1546
BtsI GCAGTG 2 cut(s) 1122, 1473
BtsIMutI CAGTG 5 cut(s) 428, 1117, 1122, 1473, 1631
BveI ACCTGC 1 cut(s) 166
Cac8I GCNNGC 1 cut(s) 973
CaiI CAGNNNCTG 1 cut(s) 536
Cfr13I GGNCC 3 cut(s) 548, 549, 886
Csp6I GTAC 3 cut(s) 661, 1249, 1275
CviAII CATG 8 cut(s) 90, 352, 1013, 1316, 1479, 1507, 1687, 1808
CviQI GTAC 3 cut(s) 661, 1249, 1275
DdeI CTNAG 6 cut(s) 228, 594, 630, 1049, 1623, 1634
DpnI GATC 7 cut(s) 186, 288, 441, 574, 823, 1047, 1764
DpnII GATC 7 cut(s) 184, 286, 439, 572, 821, 1045, 1762
DraIII CACNNNGTG 1 cut(s) 909
DriI GACNNNNNGTC 1 cut(s) 1225
Eam1104I CTCTTC 1 cut(s) 1419
Eam1105I GACNNNNNGTC 1 cut(s) 1225
EarI CTCTTC 1 cut(s) 1419
Eco24I GRGCYC 1 cut(s) 552
Eco31I GGTCTC 1 cut(s) 35
Eco47I GGWCC 1 cut(s) 886
Eco72I CACGTG 1 cut(s) 1254
EcoRI GAATTC 1 cut(s) 291
EcoRII CCWGG 1 cut(s) 1584
EcoT38I GRGCYC 1 cut(s) 552
FaeI CATG 7 cut(s) 93, 355, 1016, 1319, 1482, 1510, 1690
FalI AAGNNNNNCTT 2 cut(s) 189, 221
FaqI GGGAC 1 cut(s) 1134
FatI CATG 7 cut(s) 89, 351, 1012, 1315, 1478, 1506, 1686
FauI CCCGC 2 cut(s) 55, 998
FauNDI CATATG 1 cut(s) 1677
FblI GTMKAC 1 cut(s) 1028
Fnu4HI GCNGC 3 cut(s) 537, 771, 1427
FokI GGATG 8 cut(s) 344, 356, 449, 499, 1013, 1034, 1503, 1533
FriOI GRGCYC 1 cut(s) 552
Fsp4HI GCNGC 3 cut(s) 537, 771, 1427
FspBI CTAG 5 cut(s) 711, 920, 1100, 1568, 1661
GluI GCNGC 3 cut(s) 537, 771, 1427
HaeIII GGCC 2 cut(s) 550, 1054
HapII CCGG 2 cut(s) 133, 1434
Hin1II CATG 7 cut(s) 93, 355, 1016, 1319, 1482, 1510, 1690
HincII GTYRAC 1 cut(s) 1029
HindII GTYRAC 1 cut(s) 1029
HindIII AAGCTT 2 cut(s) 297, 596
HpaII CCGG 2 cut(s) 133, 1434
HphI GGTGA 8 cut(s) 89, 331, 461, 469, 1334, 1450, 1463, 1750
Hpy166II GTNNAC 7 cut(s) 901, 1029, 1219, 1251, 1275, 1396, 1476
Hpy188I TCNGA 2 cut(s) 532, 1715
Hpy188III TCNNGA 7 cut(s) 23, 238, 515, 632, 920, 1019, 1344
Hpy8I GTNNAC 7 cut(s) 901, 1029, 1219, 1251, 1275, 1396, 1476
HpyAV CCTTC 7 cut(s) 351, 454, 548, 571, 949, 1129, 1440
HpyCH4III ACNGT 6 cut(s) 423, 544, 780, 805, 1040, 1279
HpyCH4IV ACGT 1 cut(s) 1253
HpyF10VI GCNNNNNNNGC 2 cut(s) 506, 1534
HpyF3I CTNAG 6 cut(s) 228, 594, 630, 1049, 1623, 1634
HpySE526I ACGT 1 cut(s) 1253
Hsp92II CATG 7 cut(s) 93, 355, 1016, 1319, 1482, 1510, 1690
KpnI GGTACC 1 cut(s) 664
Kzo9I GATC 7 cut(s) 184, 286, 439, 572, 821, 1045, 1762
LmnI GCTCC 2 cut(s) 59, 1683
Lsp1109I GCAGC 3 cut(s) 523, 757, 1438
LweI GCATC 6 cut(s) 105, 508, 523, 1116, 1153, 1525
MaeI CTAG 5 cut(s) 711, 920, 1100, 1568, 1661
MaeII ACGT 1 cut(s) 1253
MaeIII GTNAC 5 cut(s) 70, 77, 169, 209, 223
MalI GATC 7 cut(s) 186, 288, 441, 574, 823, 1047, 1764
MbiI CCGCTC 1 cut(s) 62
MboI GATC 7 cut(s) 184, 286, 439, 572, 821, 1045, 1762
MboII GAAGA 8 cut(s) 253, 797, 821, 964, 1406, 1453, 1704, 1792
MfeI CAATTG 3 cut(s) 933, 1212, 1287
MhlI GDGCHC 1 cut(s) 552
MluCI AATT 9 cut(s) 291, 621, 933, 1212, 1287, 1347, 1455, 1560, 1705
MlyI GAGTC 2 cut(s) 231, 1034
MmeI TCCRAC 1 cut(s) 864
MroXI GAANNNNTTC 2 cut(s) 510, 1339
MseI TTAA 5 cut(s) 141, 963, 986, 1494, 1730
MslI CAYNNNNRTG 4 cut(s) 421, 531, 1314, 1320
MspI CCGG 2 cut(s) 133, 1434
MspR9I CCNGG 3 cut(s) 134, 1435, 1586
MunI CAATTG 3 cut(s) 933, 1212, 1287
Mva1269I GAATGC 2 cut(s) 393, 526
MvaI CCWGG 1 cut(s) 1586
MwoI GCNNNNNNNGC 2 cut(s) 506, 1534
NciI CCSGG 2 cut(s) 134, 1435
NdeI CATATG 1 cut(s) 1677
NdeII GATC 7 cut(s) 184, 286, 439, 572, 821, 1045, 1762
NlaIII CATG 7 cut(s) 93, 355, 1016, 1319, 1482, 1510, 1690
NlaIV GGNNCC 5 cut(s) 417, 550, 662, 1156, 1583
NmeAIII GCCGAG 1 cut(s) 1175
NmuCI GTSAC 3 cut(s) 70, 77, 223
NspI RCATGY 2 cut(s) 1482, 1510
NspV TTCGAA 1 cut(s) 1201
OliI CACNNNNGTG 1 cut(s) 421
PciI ACATGT 1 cut(s) 1506
PctI GAATGC 2 cut(s) 393, 526
PdmI GAANNNNTTC 2 cut(s) 510, 1339
PfeI GAWTC 8 cut(s) 262, 694, 979, 1340, 1363, 1670, 1783, 1804
PkrI GCNGC 3 cut(s) 538, 772, 1428
Ple19I CGATCG 1 cut(s) 575
PleI GAGTC 2 cut(s) 230, 1033
PmaCI CACGTG 1 cut(s) 1254
PmlI CACGTG 1 cut(s) 1254
PpsI GAGTC 2 cut(s) 230, 1033
Ppu21I YACGTR 1 cut(s) 1254
PscI ACATGT 1 cut(s) 1506
PshAI GACNNNNGTC 1 cut(s) 1305
Psp6I CCWGG 1 cut(s) 1584
PspCI CACGTG 1 cut(s) 1254
PspGI CCWGG 1 cut(s) 1584
PspN4I GGNNCC 5 cut(s) 417, 550, 662, 1156, 1583
PspOMI GGGCCC 1 cut(s) 548
PspPI GGNCC 3 cut(s) 548, 549, 886
PstI CTGCAG 1 cut(s) 1428
PstNI CAGNNNCTG 1 cut(s) 536
PvuI CGATCG 1 cut(s) 575
RsaI GTAC 3 cut(s) 662, 1250, 1276
RsaNI GTAC 3 cut(s) 661, 1249, 1275
RseI CAYNNNNRTG 4 cut(s) 421, 531, 1314, 1320
SalI GTCGAC 1 cut(s) 1027
SaqAI TTAA 5 cut(s) 141, 963, 986, 1494, 1730
SatI GCNGC 3 cut(s) 537, 771, 1427
Sau3AI GATC 7 cut(s) 184, 286, 439, 572, 821, 1045, 1762
Sau96I GGNCC 3 cut(s) 548, 549, 886
SchI GAGTC 2 cut(s) 231, 1034
ScrFI CCNGG 3 cut(s) 134, 1435, 1586
SduI GDGCHC 1 cut(s) 552
SfaNI GCATC 6 cut(s) 105, 508, 523, 1116, 1153, 1525
SfcI CTRYAG 2 cut(s) 1036, 1424
SfuI TTCGAA 1 cut(s) 1201
SinI GGWCC 1 cut(s) 886
SmiMI CAYNNNNRTG 4 cut(s) 421, 531, 1314, 1320
SmlI CTYRAG 3 cut(s) 21, 495, 1576
SmoI CTYRAG 3 cut(s) 21, 495, 1576
Sse9I AATT 9 cut(s) 291, 621, 933, 1212, 1287, 1347, 1455, 1560, 1705
SsiI CCGC 3 cut(s) 14, 62, 1005
SspMI CTAG 5 cut(s) 711, 920, 1100, 1568, 1661
StyD4I CCNGG 3 cut(s) 132, 1433, 1584
TaaI ACNGT 6 cut(s) 423, 544, 780, 805, 1040, 1279
TaiI ACGT 1 cut(s) 1256
TaqII GACCGA 1 cut(s) 58
TasI AATT 9 cut(s) 291, 621, 933, 1212, 1287, 1347, 1455, 1560, 1705
TatI WGTACW 2 cut(s) 1248, 1274
TfiI GAWTC 8 cut(s) 262, 694, 979, 1340, 1363, 1670, 1783, 1804
Tru1I TTAA 5 cut(s) 141, 963, 986, 1494, 1730
Tru9I TTAA 5 cut(s) 141, 963, 986, 1494, 1730
TscAI CASTG 5 cut(s) 428, 1117, 1122, 1473, 1638
TseFI GTSAC 3 cut(s) 70, 77, 223
TseI GCWGC 3 cut(s) 536, 770, 1426
Tsp45I GTSAC 3 cut(s) 70, 77, 223
TspDTI ATGAA 7 cut(s) 340, 519, 849, 971, 1148, 1535, 1796
TspRI CASTG 5 cut(s) 428, 1117, 1122, 1473, 1638
VpaK11BI GGWCC 1 cut(s) 886
XapI RAATTY 2 cut(s) 291, 1455
XbaI TCTAGA 1 cut(s) 919
XceI RCATGY 2 cut(s) 1482, 1510
XmiI GTMKAC 1 cut(s) 1028
XmnI GAANNNNTTC 2 cut(s) 510, 1339
XspI CTAG 5 cut(s) 711, 920, 1100, 1568, 1661
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.