Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr11

Orthogroup ID

OG0008410

Physical Location & Seq

Genomic Coordinates Forward (+)

5343700 .. 5349111

Gene Structure 5412 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2541 bp

ATGGTGCTTACTGAGAAATCGGACGGAAAAACAATCACAGACTCCGCCATTTCATCCAAGATTCCGGCGACAGCAAACCCTTTAGCCGAAGAGCCATCGCAGATTGCTTCGAACATCAATTACCACGCGAAATTCAGCCCCCACTTCTCGCCGTTCAAGTTCGAGCCGGAGCAAGCCTACTACGCGACAGCTGACAGCGTCCGCGATCGCCTGATCCAGCAATGGAACGAGACGTACCTGCATTTCCACAAGGAGAATCCCAAGCAGACATACTACTTGTCCATGGAGTATCTTCAAGGACGAGCCTTGACCAATGCGATCGGGAATTTGAATGTTCAGAGTGCTTATGCTGATGCTTTGAACAAGTTGGGGCATCAGCTGGAGGAAATAACAGAGCAGGAAAAAGATGCAGCACTCGGAAATGGTGGGCTGGGAAGGCTTGCTTCGTGCTTTCTAGACTCCATGGCAACGCTAAACTTACCTGCGTGGGGGTATGGTTTGAGGTACAGATATGGTCTATTCAAGCAGCGGATCGCCAAGGATGGCCAGGAAGAAACTGCTGAGGATTGGCTAGAGAAGTTTAGTCCTTGGGAAGTTGTCAGGCATGATGTTGTGCACCCTGTCAGATTCTTTGGCCGTGTTCATGTCAATCCTGATGGATCCCGAAAGTGGGTTGAGGGAGAGGTTTTGCGAGCTCTGGCTTATGATGTGCCAATTCCAGGATACAAAACCAAGAACACTATTAGTCTTCGTCTATGGGAAGCTAAAGCATCTGCTGAGGATTTTAACCTATTTCAATTTAATGATGGACAGTATGAATCTGCTGCGCAGCTTCATTCTCGAGCGCAACAGATTTGTGCTGTTTTGTATCCTGGAGATGCCACAGAGGAGGGGAAACTTTTAAGGCTGAAGCAACAATTCTTCCTGTGCAGTGCATCACTTCAGGATATTATTTGTAGATTCAAGGAGAGGAAGCAGGGGACAGACTCATTGCAATGGTCAGAATTTCCGAAAAAGGTTGCTGTCCAAATGAACGATACTCATCCTACACTAGCAATCCCTGAGCTAATGCGATTGCTATTGGATGAGGAAGGGCTTGCGTGGGATGAGGCATGGGAAGTGACAACAAGGACTGTTGCTTATACTAATCACACAGTCCTTCCTGAAGCACTTGAGAAATGGTCACAAACTGTAATGTGGAAGCTTCTCCCTCGCCATATGGAAATAATAGAAGAAATTGACAAAAGATTCATTGCTATGGTACGTGCTACACGAACTGATCTTGAGAGCAAAATTCCCAGCTTGTGCATTTTGGATAACAATCCCAAAAAGCCTGTTGTGCATATGGCAAATTTATGTGTGGTGTCTGCACATACGGTTAATGGTGTTGCCCAATTGCACAGTGATATTTTGAAGAATGAGTTATTTGTAGACTATGTCTCTATATGGCCAACAAAGTTCCAAAACAAAACAAATGGGATTACTCCTCGTCGGTGGCTTCGCTTTTGCAGTCCTGAGCTCAGTAACATTATAACCAAATGGTTAAAAACTGATGAATGGGTTACCAACCTGGGCCTACTTGTAGGTCTTCGAAAGTTTGCCGATGATTCAAAATTACAAGAAGAATGGGCGTCTGCCAAGATGGCTAACAAGAAGCGTTTGGCACATTACATAGAGCACGTGGCAGGTGTCAAGATTGACCCAAACAGTCTGTTTGACATACAAGTGAAGCGTATCCATGAATATAAGAGACAGTTGCTGAATATTCTGGGTGCAGTTTATCGGTATAAGAAGTTAAAGGAGATGAGCCCTGAAGAGCGGAAGAAGACAACTCCACGTACTATCATGATTGGAGGAAAAGCATTTGCAACATATACAAATGCAAAAAGAATAGTCAAGCTGGTAGACGATGTAGGTGCTGTGGTCAACAAGGATCCCGATGTCAATAGCTACTTGAAGGTTGTATTTGTTCCAAATTACAATGTATCTGTTGCCGAGATACTTATCCCAGGAAGCGAGCTGTCACAACATATCAGCACTGCAGGCATGGAGGCAAGTGGCACAAGCAATATGAAATTTGCTCTGAACGGTTGCCTCATAATTGGAACATTGGATGGGGCTAATGTGGAAATCCGTGAGGAAATTGGGGAGGATAACTTTTTCCTCTTTGGTGCAACAGCAGATGAAGTCCCTAATCTACGCAAGGACAGAGAGAACGGCCTGTTCAAACCAGATCCTCGGTTTGAAGAAGCCAAGCAGTTTGTTAGGAGTGGAGCATTTGGGAGCTACGATTATAATCCACTTCTTGACTCTCTGGAGGGGAACACCGGTTATGGTCGCGGTGACTATTTTCTTGTTGGCCATGACTTCGCACAGTATATGGATGCTCAGGCAAAAGTAGATGAAGCTTACAAGGATAGGAAAAGGTGGCTGAAGATGTCCATACTAAGCACTGCAGGGTCTGGCAAGTTCAGCAGTGACCGGACAATTGCTCAGTACGCCAAGGAAATCTGGAACATCGAGGAGTGCCGCGTGCCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000272 GO:0001101 GO:0003674 GO:0003824 GO:0004645 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005975 GO:0005976 GO:0005977 GO:0005980 GO:0006073 GO:0006091 GO:0006112 GO:0006950 GO:0008144 GO:0008150 GO:0008152 GO:0008184 GO:0009056 GO:0009057 GO:0009251 GO:0009414 GO:0009415 GO:0009507 GO:0009536 GO:0009628 GO:0009987 GO:0010035 GO:0010038 GO:0015980 GO:0016052 GO:0016740 GO:0016757 GO:0016758 GO:0019842 GO:0030170 GO:0036094 GO:0042221 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044237 GO:0044238 GO:0044247 GO:0044248 GO:0044260 GO:0044262 GO:0044264 GO:0044275 GO:0044424 GO:0044444 GO:0044464 GO:0046686 GO:0048037 GO:0050662 GO:0050896 GO:0055114 GO:0070279 GO:0071704 GO:0097159 GO:1901363 GO:1901575 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 ko01110 ko02026 ko04217 ko04910 ko04922 ko04931 map00500 map01100 map01110 map02026 map04217 map04910 map04922 map04931

Pfam Domains

Protein Families

Phosphorylase

Protein Analysis

847

Amino Acids

96.18

Weight (kDa)

6.51

Isoelectric Point (pI)

41.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Phosphorylase	PF00343	120 - 840	4.5e-300	Carbohydrate phosphorylase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008410)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G46970
fragaria_vesca	FvH4_3g37910 FvH4_3g37910 FvH4_3g37910 FvH4_3g37910 FvH4_3g37910
malus_domestica	MD03G1077800.v1.1 MD05G1167500.v1.1 MD11G1082200.v1.1
prunus_persica	Prupe.6G062600_v2.0.a1
pyrus_communis	pycom03g06170 pycom11g07050
rosa_chinensis	RchiOBHm_Chr5g0068321
rosa_laevigata	RLG00000035965
rosa_multiflora	Rmu_sc0001418.1_g000022
rosa_roxburghii	Rroxscaffold_1G00012440 Rroxscaffold_1G00013180
rosa_rugosa	Rorug05G0388800
rosa_samantha	Rh5AG447300 Rh5BG465400 Rh5CG487000 Rh5DG479000
rosa_wichuraiana	Rw5G041770

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1532, 2295
AarI	CACCTGC	1 cut(s)	1676
Acc16I	TGCGCA	1 cut(s)	828
Acc36I	ACCTGC	3 cut(s)	246, 490, 1676
AccBSI	CCGCTC	1 cut(s)	1819
AccI	GTMKAC	2 cut(s)	1431, 1905
AccII	CGCG	5 cut(s)	128, 185, 204, 2340, 2532
AciI	CCGC	6 cut(s)	45, 202, 529, 1819, 2340, 2530
AclWI	GGATC	7 cut(s)	208, 539, 654, 667, 1928, 1941, 2228
AcoI	YGGCCR	4 cut(s)	544, 634, 1448, 2359
AcsI	RAATTY	6 cut(s)	131, 325, 1004, 1293, 1351, 2075
AcuI	CTGAAG	5 cut(s)	926, 929, 1185, 1833, 2453
AcvI	CACGTG	1 cut(s)	1681
AcyI	GRCGYC	1 cut(s)	1631
AfaI	GTAC	5 cut(s)	236, 506, 1263, 1840, 2498
AfiI	CCNNNNNNNGG	4 cut(s)	488, 669, 670, 719
AgeI	ACCGGT	1 cut(s)	2327
AjnI	CCWGG	5 cut(s)	546, 718, 871, 1569, 2008
Alw21I	GWGCWC	4 cut(s)	618, 697, 1521, 1680
Alw26I	GTCTC	3 cut(s)	224, 1444, 1744
Alw44I	GTGCAC	1 cut(s)	614
AlwI	GGATC	7 cut(s)	208, 539, 654, 667, 1928, 1941, 2228
AlwNI	CAGNNNCTG	2 cut(s)	1759, 2462
Ama87I	CYCGRG	1 cut(s)	840
AoxI	GGCC	6 cut(s)	544, 634, 1448, 1573, 2218, 2359
ApaLI	GTGCAC	1 cut(s)	614
ApeKI	GCWGC	4 cut(s)	410, 526, 824, 829
ApoI	RAATTY	6 cut(s)	131, 325, 1004, 1293, 1351, 2075
AsiGI	ACCGGT	1 cut(s)	2327
AsiSI	GCGATCGC	1 cut(s)	208
AspLEI	GCGC	2 cut(s)	829, 847
AspS9I	GGNCC	1 cut(s)	1573
AsuHPI	GGTGA	1 cut(s)	2354
AsuII	TTCGAA	2 cut(s)	110, 1591
AvaI	CYCGRG	1 cut(s)	840
BaeGI	GKGCMC	1 cut(s)	618
BalI	TGGCCA	3 cut(s)	546, 1450, 2361
BamHI	GGATCC	2 cut(s)	659, 1933
BanII	GRGCYC	3 cut(s)	697, 1521, 1811
BbrPI	CACGTG	1 cut(s)	1681
BbsI	GAAGAC	3 cut(s)	740, 1580, 1832
Bbv12I	GWGCWC	4 cut(s)	618, 697, 1521, 1680
BbvCI	CCTCAGC	2 cut(s)	561, 777
BbvI	GCAGC	4 cut(s)	422, 538, 811, 841
BccI	CCATC	6 cut(s)	103, 536, 650, 800, 1636, 2108
BceAI	ACGGC	3 cut(s)	136, 621, 2233
BcgI	CGANNNNNNTGC	2 cut(s)	1898, 1932
BciT130I	CCWGG	5 cut(s)	548, 720, 873, 1571, 2010
BciVI	GTATCC	3 cut(s)	716, 879, 1745
BcoDI	GTCTC	3 cut(s)	224, 1444, 1744
BfaI	CTAG	3 cut(s)	455, 572, 1052
BfmI	CTRYAG	2 cut(s)	2040, 2454
BfuAI	ACCTGC	3 cut(s)	246, 490, 1676
BfuI	GTATCC	3 cut(s)	716, 879, 1745
BglI	GCCNNNNNGGC	1 cut(s)	1643
BisI	GCNGC	5 cut(s)	411, 527, 825, 830, 2530
BlsI	GCNGC	5 cut(s)	412, 528, 826, 831, 2531
Bme1390I	CCNGG	5 cut(s)	548, 720, 873, 1571, 2010
BmeT110I	CYCGRG	1 cut(s)	840
BmgT120I	GGNCC	1 cut(s)	1573
BmiI	GGNNCC	2 cut(s)	661, 1935
BmrFI	CCNGG	5 cut(s)	548, 720, 873, 1571, 2010
BmsI	GCATC	7 cut(s)	343, 382, 397, 779, 868, 944, 2374
BpiI	GAAGAC	3 cut(s)	740, 1580, 1832
BpmI	CTGGAG	3 cut(s)	401, 894, 2336
Bpu10I	CCTNAGC	5 cut(s)	561, 777, 1062, 1515, 2388
Bpu14I	TTCGAA	2 cut(s)	110, 1591
BpuEI	CTTGAG	2 cut(s)	1193, 1304
BsaAI	YACGTR	3 cut(s)	1265, 1681, 1838
BsaBI	GATNNNNATC	4 cut(s)	1041, 1320, 2003, 2295
BsaHI	GRCGYC	1 cut(s)	1631
BsaJI	CCNNGG	8 cut(s)	282, 462, 537, 587, 1570, 2008, 2237, 2502
BsaWI	WCCGGW	2 cut(s)	2327, 2481
Bsc4I	CCNNNNNNNGG	4 cut(s)	488, 669, 670, 719
Bse118I	RCCGGY	1 cut(s)	2327
Bse3DI	GCAATG	4 cut(s)	227, 989, 1001, 1251
Bse8I	GATNNNNATC	4 cut(s)	1041, 1320, 2003, 2295
BseBI	CCWGG	5 cut(s)	548, 720, 873, 1571, 2010
BseDI	CCNNGG	8 cut(s)	282, 462, 537, 587, 1570, 2008, 2237, 2502
BseGI	GGATG	7 cut(s)	53, 547, 1042, 1090, 1111, 2119, 2389
BseJI	GATNNNNATC	4 cut(s)	1041, 1320, 2003, 2295
BseLI	CCNNNNNNNGG	4 cut(s)	488, 669, 670, 719
BseMI	GCAATG	4 cut(s)	227, 989, 1001, 1251
BseMII	CTCAG	7 cut(s)	552, 768, 1053, 1506, 1534, 2402, 2507
BseRI	GAGGAG	3 cut(s)	902, 1476, 2537
BseSI	GKGCMC	1 cut(s)	618
BseXI	GCAGC	4 cut(s)	422, 538, 811, 841
BseYI	CCCAGC	2 cut(s)	430, 1298
BsgI	GTGCAG	3 cut(s)	949, 1353, 1794
Bsh1236I	CGCG	5 cut(s)	128, 185, 204, 2340, 2532
Bsh1285I	CGRYCG	2 cut(s)	208, 321
BshFI	GGCC	6 cut(s)	546, 636, 1450, 1575, 2220, 2361
BshTI	ACCGGT	1 cut(s)	2327
BsiEI	CGRYCG	2 cut(s)	208, 321
BsiHKAI	GWGCWC	4 cut(s)	618, 697, 1521, 1680
BsiHKCI	CYCGRG	1 cut(s)	840
BsiSI	CCGG	4 cut(s)	65, 167, 2328, 2482
BslFI	GGGAC	2 cut(s)	994, 2174
BslI	CCNNNNNNNGG	4 cut(s)	488, 669, 670, 719
BsmAI	GTCTC	3 cut(s)	224, 1444, 1744
BsmBI	CGTCTC	1 cut(s)	224
BsmFI	GGGAC	2 cut(s)	994, 2174
BsnI	GGCC	6 cut(s)	546, 636, 1450, 1575, 2220, 2361
BsoBI	CYCGRG	1 cut(s)	840
Bsp119I	TTCGAA	2 cut(s)	110, 1591
Bsp1286I	GDGCHC	5 cut(s)	618, 697, 1521, 1680, 1811
Bsp143I	GATC	8 cut(s)	205, 213, 318, 531, 659, 1279, 1933, 2233
Bsp19I	CCATGG	2 cut(s)	282, 462
BspACI	CCGC	6 cut(s)	45, 202, 529, 1819, 2340, 2530
BspANI	GGCC	6 cut(s)	546, 636, 1450, 1575, 2220, 2361
BspCNI	CTCAG	8 cut(s)	4, 553, 769, 1054, 1507, 1533, 2401, 2506
BspFNI	CGCG	5 cut(s)	128, 185, 204, 2340, 2532
BspHI	TCATGA	1 cut(s)	1845
BspLI	GGNNCC	2 cut(s)	661, 1935
BspMAI	CTGCAG	2 cut(s)	2044, 2458
BspMI	ACCTGC	3 cut(s)	246, 490, 1676
BspPI	GGATC	7 cut(s)	208, 539, 654, 667, 1928, 1941, 2228
BspQI	GCTCTTC	2 cut(s)	84, 1809
BspT104I	TTCGAA	2 cut(s)	110, 1591
BsrBI	CCGCTC	1 cut(s)	1819
BsrDI	GCAATG	4 cut(s)	227, 989, 1001, 1251
BsrFI	RCCGGY	1 cut(s)	2327
BssAI	RCCGGY	1 cut(s)	2327
BssECI	CCNNGG	8 cut(s)	282, 462, 537, 587, 1570, 2008, 2237, 2502
BssMI	GATC	8 cut(s)	205, 213, 318, 531, 659, 1279, 1933, 2233
BssNI	GRCGYC	1 cut(s)	1631
BssT1I	CCWWGG	5 cut(s)	282, 462, 537, 587, 2502
Bst2UI	CCWGG	5 cut(s)	548, 720, 873, 1571, 2010
Bst6I	CTCTTC	2 cut(s)	84, 1809
BstACI	GRCGYC	1 cut(s)	1631
BstBAI	YACGTR	3 cut(s)	1265, 1681, 1838
BstBI	TTCGAA	2 cut(s)	110, 1591
BstC8I	GCNNGC	7 cut(s)	174, 441, 693, 1098, 2018, 2044, 2534
BstDEI	CTNAG	9 cut(s)	12, 561, 777, 1062, 1515, 1520, 2388, 2447, 2493
BstDSI	CCRYGG	2 cut(s)	282, 462
BstEII	GGTNACC	1 cut(s)	1561
BstF5I	GGATG	7 cut(s)	53, 547, 1042, 1090, 1111, 2119, 2389
BstFNI	CGCG	5 cut(s)	128, 185, 204, 2340, 2532
BstHHI	GCGC	2 cut(s)	829, 847
BstKTI	GATC	8 cut(s)	208, 216, 321, 534, 662, 1282, 1936, 2236
BstMAI	GTCTC	3 cut(s)	224, 1444, 1744
BstMBI	GATC	8 cut(s)	205, 213, 318, 531, 659, 1279, 1933, 2233
BstMCI	CGRYCG	2 cut(s)	208, 321
BstMWI	GCNNNNNNNGC	7 cut(s)	182, 436, 1339, 1643, 2043, 2472, 2498
BstNI	CCWGG	5 cut(s)	548, 720, 873, 1571, 2010
BstPI	GGTNACC	1 cut(s)	1561
BstSCI	CCNGG	5 cut(s)	546, 718, 871, 1569, 2008
BstSFI	CTRYAG	2 cut(s)	2040, 2454
BstSLI	GKGCMC	1 cut(s)	618
BstUI	CGCG	5 cut(s)	128, 185, 204, 2340, 2532
BstV1I	GCAGC	4 cut(s)	422, 538, 811, 841
BstV2I	GAAGAC	3 cut(s)	740, 1580, 1832
BstX2I	RGATCY	3 cut(s)	659, 1933, 2233
BstYI	RGATCY	3 cut(s)	659, 1933, 2233
BsuI	GTATCC	3 cut(s)	716, 879, 1745
BsuRI	GGCC	6 cut(s)	546, 636, 1450, 1575, 2220, 2361
BtgI	CCRYGG	2 cut(s)	282, 462
BtgZI	GCGATG	1 cut(s)	81
BtsCI	GGATG	7 cut(s)	53, 547, 1042, 1090, 1111, 2119, 2389
BtsI	GCAGTG	4 cut(s)	937, 2037, 2451, 2482
BtsIMutI	CAGTG	5 cut(s)	937, 1408, 2037, 2451, 2482
BveI	ACCTGC	3 cut(s)	246, 490, 1676
Cac8I	GCNNGC	7 cut(s)	174, 441, 693, 1098, 2018, 2044, 2534
CaiI	CAGNNNCTG	2 cut(s)	1759, 2462
CciI	TCATGA	1 cut(s)	1845
CfoI	GCGC	2 cut(s)	829, 847
Cfr10I	RCCGGY	1 cut(s)	2327
Cfr13I	GGNCC	1 cut(s)	1573
CseI	GACGC	2 cut(s)	187, 1620
Csp6I	GTAC	5 cut(s)	235, 505, 1262, 1839, 2497
CspAI	ACCGGT	1 cut(s)	2327
CviAII	CATG	9 cut(s)	283, 463, 605, 644, 1113, 1739, 1846, 2047, 2363
CviQI	GTAC	5 cut(s)	235, 505, 1262, 1839, 2497
DdeI	CTNAG	9 cut(s)	12, 561, 777, 1062, 1515, 1520, 2388, 2447, 2493
DpnI	GATC	8 cut(s)	207, 215, 320, 533, 661, 1281, 1935, 2235
DpnII	GATC	8 cut(s)	205, 213, 318, 531, 659, 1279, 1933, 2233
EaeI	YGGCCR	4 cut(s)	544, 634, 1448, 2359
Eam1104I	CTCTTC	2 cut(s)	84, 1809
EarI	CTCTTC	2 cut(s)	84, 1809
EciI	GGCGGA	1 cut(s)	34
Ecl136II	GAGCTC	2 cut(s)	695, 1519
Eco130I	CCWWGG	5 cut(s)	282, 462, 537, 587, 2502
Eco24I	GRGCYC	3 cut(s)	697, 1521, 1811
Eco53kI	GAGCTC	2 cut(s)	695, 1519
Eco57I	CTGAAG	5 cut(s)	926, 929, 1185, 1833, 2453
Eco72I	CACGTG	1 cut(s)	1681
Eco88I	CYCGRG	1 cut(s)	840
Eco91I	GGTNACC	1 cut(s)	1561
EcoICRI	GAGCTC	2 cut(s)	695, 1519
EcoO65I	GGTNACC	1 cut(s)	1561
EcoRII	CCWGG	5 cut(s)	546, 718, 871, 1569, 2008
EcoT14I	CCWWGG	5 cut(s)	282, 462, 537, 587, 2502
EcoT38I	GRGCYC	3 cut(s)	697, 1521, 1811
ErhI	CCWWGG	5 cut(s)	282, 462, 537, 587, 2502
Esp3I	CGTCTC	1 cut(s)	224
FaeI	CATG	9 cut(s)	286, 466, 608, 647, 1116, 1742, 1849, 2050, 2366
FalI	AAGNNNNNCTT	2 cut(s)	427, 459
FaqI	GGGAC	2 cut(s)	994, 2174
FatI	CATG	9 cut(s)	282, 462, 604, 643, 1112, 1738, 1845, 2046, 2362
FauNDI	CATATG	2 cut(s)	1218, 1344
FblI	GTMKAC	2 cut(s)	1431, 1905
Fnu4HI	GCNGC	5 cut(s)	411, 527, 825, 830, 2530
FokI	GGATG	7 cut(s)	40, 554, 1029, 1097, 1118, 2126, 2396
FriOI	GRGCYC	3 cut(s)	697, 1521, 1811
Fsp4HI	GCNGC	5 cut(s)	411, 527, 825, 830, 2530
FspBI	CTAG	3 cut(s)	455, 572, 1052
FspI	TGCGCA	1 cut(s)	828
GlaI	GCGC	2 cut(s)	828, 846
GluI	GCNGC	5 cut(s)	411, 527, 825, 830, 2530
GsaI	CCCAGC	2 cut(s)	434, 1302
GsuI	CTGGAG	3 cut(s)	401, 894, 2336
HaeIII	GGCC	6 cut(s)	546, 636, 1450, 1575, 2220, 2361
HapII	CCGG	4 cut(s)	65, 167, 2328, 2482
HgaI	GACGC	2 cut(s)	187, 1620
HhaI	GCGC	2 cut(s)	829, 847
Hin1I	GRCGYC	1 cut(s)	1631
Hin1II	CATG	9 cut(s)	286, 466, 608, 647, 1116, 1742, 1849, 2050, 2366
Hin6I	GCGC	2 cut(s)	827, 845
HinP1I	GCGC	2 cut(s)	827, 845
HincII	GTYRAC	1 cut(s)	1927
HindII	GTYRAC	1 cut(s)	1927
HindIII	AAGCTT	2 cut(s)	1202, 2406
HpaII	CCGG	4 cut(s)	65, 167, 2328, 2482
HphI	GGTGA	1 cut(s)	2354
Hpy166II	GTNNAC	4 cut(s)	616, 1432, 1906, 1927
Hpy188I	TCNGA	7 cut(s)	22, 339, 419, 626, 1003, 1011, 2085
Hpy8I	GTNNAC	4 cut(s)	616, 1432, 1906, 1927
Hpy99I	CGWCG	1 cut(s)	1494
HpyAV	CCTTC	4 cut(s)	429, 1085, 1169, 1951
HpyCH4IV	ACGT	4 cut(s)	233, 1264, 1680, 1837
HpyF10VI	GCNNNNNNNGC	7 cut(s)	182, 436, 1339, 1643, 2043, 2472, 2498
HpyF3I	CTNAG	9 cut(s)	12, 561, 777, 1062, 1515, 1520, 2388, 2447, 2493
HpySE526I	ACGT	4 cut(s)	233, 1264, 1680, 1837
Hsp92I	GRCGYC	1 cut(s)	1631
Hsp92II	CATG	9 cut(s)	286, 466, 608, 647, 1116, 1742, 1849, 2050, 2366
HspAI	GCGC	2 cut(s)	827, 845
Kzo9I	GATC	8 cut(s)	205, 213, 318, 531, 659, 1279, 1933, 2233
LguI	GCTCTTC	2 cut(s)	84, 1809
LmnI	GCTCC	3 cut(s)	169, 2273, 2283
Lsp1109I	GCAGC	4 cut(s)	422, 538, 811, 841
LweI	GCATC	7 cut(s)	343, 382, 397, 779, 868, 944, 2374
MaeI	CTAG	3 cut(s)	455, 572, 1052
MaeII	ACGT	4 cut(s)	233, 1264, 1680, 1837
MaeIII	GTNAC	7 cut(s)	1120, 1182, 1523, 1561, 2022, 2342, 2477
MalI	GATC	8 cut(s)	207, 215, 320, 533, 661, 1281, 1935, 2235
MbiI	CCGCTC	1 cut(s)	1819
MboI	GATC	8 cut(s)	205, 213, 318, 531, 659, 1279, 1933, 2233
MfeI	CAATTG	2 cut(s)	1394, 2487
MflI	RGATCY	3 cut(s)	659, 1933, 2233
MhlI	GDGCHC	5 cut(s)	618, 697, 1521, 1680, 1811
MlsI	TGGCCA	3 cut(s)	546, 1450, 2361
MluNI	TGGCCA	3 cut(s)	546, 1450, 2361
MlyI	GAGTC	4 cut(s)	35, 452, 980, 2303
Mox20I	TGGCCA	3 cut(s)	546, 1450, 2361
MscI	TGGCCA	3 cut(s)	546, 1450, 2361
MseI	TTAA	6 cut(s)	786, 801, 902, 1380, 1544, 1796
MslI	CAYNNNNRTG	3 cut(s)	994, 1256, 1724
Msp20I	TGGCCA	3 cut(s)	546, 1450, 2361
MspA1I	CMGCKG	3 cut(s)	191, 379, 529
MspI	CCGG	4 cut(s)	65, 167, 2328, 2482
MspR9I	CCNGG	5 cut(s)	548, 720, 873, 1571, 2010
MunI	CAATTG	2 cut(s)	1394, 2487
MvaI	CCWGG	5 cut(s)	548, 720, 873, 1571, 2010
MvnI	CGCG	5 cut(s)	128, 185, 204, 2340, 2532
MwoI	GCNNNNNNNGC	7 cut(s)	182, 436, 1339, 1643, 2043, 2472, 2498
NcoI	CCATGG	2 cut(s)	282, 462
NdeI	CATATG	2 cut(s)	1218, 1344
NdeII	GATC	8 cut(s)	205, 213, 318, 531, 659, 1279, 1933, 2233
NlaIII	CATG	9 cut(s)	286, 466, 608, 647, 1116, 1742, 1849, 2050, 2366
NlaIV	GGNNCC	2 cut(s)	661, 1935
NmeAIII	GCCGAG	1 cut(s)	2020
NmuCI	GTSAC	5 cut(s)	1120, 1182, 2022, 2342, 2477
NsbI	TGCGCA	1 cut(s)	828
NspV	TTCGAA	2 cut(s)	110, 1591
PaeR7I	CTCGAG	1 cut(s)	840
PagI	TCATGA	1 cut(s)	1845
PaqCI	CACCTGC	1 cut(s)	1676
PciSI	GCTCTTC	2 cut(s)	84, 1809
PcsI	WCGNNNNNNNCGW	1 cut(s)	1270
PfeI	GAWTC	7 cut(s)	61, 256, 627, 818, 960, 1248, 1607
PflFI	GACNNNGTC	2 cut(s)	197, 1436
PfoI	TCCNGGA	2 cut(s)	718, 871
PinAI	ACCGGT	1 cut(s)	2327
PkrI	GCNGC	5 cut(s)	412, 528, 826, 831, 2531
Ple19I	CGATCG	2 cut(s)	208, 321
PleI	GAGTC	4 cut(s)	35, 452, 980, 2303
PmaCI	CACGTG	1 cut(s)	1681
PmlI	CACGTG	1 cut(s)	1681
PpsI	GAGTC	4 cut(s)	35, 452, 980, 2303
Ppu21I	YACGTR	3 cut(s)	1265, 1681, 1838
PsiI	TTATAA	2 cut(s)	1532, 2295
Psp124BI	GAGCTC	2 cut(s)	697, 1521
Psp6I	CCWGG	5 cut(s)	546, 718, 871, 1569, 2008
PspCI	CACGTG	1 cut(s)	1681
PspEI	GGTNACC	1 cut(s)	1561
PspFI	CCCAGC	2 cut(s)	430, 1298
PspGI	CCWGG	5 cut(s)	546, 718, 871, 1569, 2008
PspN4I	GGNNCC	2 cut(s)	661, 1935
PspPI	GGNCC	1 cut(s)	1573
PsrI	GAACNNNNNNTAC	4 cut(s)	104, 136, 218, 250
PstI	CTGCAG	2 cut(s)	2044, 2458
PstNI	CAGNNNCTG	2 cut(s)	1759, 2462
PsuI	RGATCY	3 cut(s)	659, 1933, 2233
PsyI	GACNNNGTC	2 cut(s)	197, 1436
PvuI	CGATCG	2 cut(s)	208, 321
PvuII	CAGCTG	2 cut(s)	191, 379
RgaI	GCGATCGC	1 cut(s)	208
RsaI	GTAC	5 cut(s)	236, 506, 1263, 1840, 2498
RsaNI	GTAC	5 cut(s)	235, 505, 1262, 1839, 2497
RseI	CAYNNNNRTG	3 cut(s)	994, 1256, 1724
SacI	GAGCTC	2 cut(s)	697, 1521
SapI	GCTCTTC	2 cut(s)	84, 1809
SaqAI	TTAA	6 cut(s)	786, 801, 902, 1380, 1544, 1796
SatI	GCNGC	5 cut(s)	411, 527, 825, 830, 2530
Sau3AI	GATC	8 cut(s)	205, 213, 318, 531, 659, 1279, 1933, 2233
Sau96I	GGNCC	1 cut(s)	1573
SchI	GAGTC	4 cut(s)	35, 452, 980, 2303
ScrFI	CCNGG	5 cut(s)	548, 720, 873, 1571, 2010
SduI	GDGCHC	5 cut(s)	618, 697, 1521, 1680, 1811
SfaAI	GCGATCGC	1 cut(s)	208
SfaNI	GCATC	7 cut(s)	343, 382, 397, 779, 868, 944, 2374
SfcI	CTRYAG	2 cut(s)	2040, 2454
Sfr274I	CTCGAG	1 cut(s)	840
SfuI	TTCGAA	2 cut(s)	110, 1591
SgfI	GCGATCGC	1 cut(s)	208
SlaI	CTCGAG	1 cut(s)	840
SmiMI	CAYNNNNRTG	3 cut(s)	994, 1256, 1724
SmlI	CTYRAG	3 cut(s)	840, 1172, 1283
SmoI	CTYRAG	3 cut(s)	840, 1172, 1283
SsiI	CCGC	6 cut(s)	45, 202, 529, 1819, 2340, 2530
SspI	AATATT	1 cut(s)	1765
SspMI	CTAG	3 cut(s)	455, 572, 1052
SstI	GAGCTC	2 cut(s)	697, 1521
StyD4I	CCNGG	5 cut(s)	546, 718, 871, 1569, 2008
StyI	CCWWGG	5 cut(s)	282, 462, 537, 587, 2502
TaiI	ACGT	4 cut(s)	236, 1267, 1683, 1840
TaqI	TCGA	5 cut(s)	110, 162, 841, 1591, 2520
TauI	GCSGC	1 cut(s)	2532
TfiI	GAWTC	7 cut(s)	61, 256, 627, 818, 960, 1248, 1607
Tru1I	TTAA	6 cut(s)	786, 801, 902, 1380, 1544, 1796
Tru9I	TTAA	6 cut(s)	786, 801, 902, 1380, 1544, 1796
TscAI	CASTG	5 cut(s)	937, 1408, 2044, 2458, 2482
TseFI	GTSAC	5 cut(s)	1120, 1182, 2022, 2342, 2477
TseI	GCWGC	4 cut(s)	410, 526, 824, 829
Tsp45I	GTSAC	5 cut(s)	1120, 1182, 2022, 2342, 2477
TspGWI	ACGGA	2 cut(s)	39, 2123
TspRI	CASTG	5 cut(s)	937, 1408, 2044, 2458, 2482
Tth111I	GACNNNGTC	2 cut(s)	197, 1436
VneI	GTGCAC	1 cut(s)	614
XapI	RAATTY	6 cut(s)	131, 325, 1004, 1293, 1351, 2075
XbaI	TCTAGA	1 cut(s)	454
XhoI	CTCGAG	1 cut(s)	840
XmiI	GTMKAC	2 cut(s)	1431, 1905
XspI	CTAG	3 cut(s)	455, 572, 1052

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.