pycom11g09590

Protein UPSTREAM OF

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
OG0008643
Physical Location & Seq
Reverse (-)
7829547 .. 7833468
3922 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1677 bp
ATGAGCACCTCAAACAAAGCATACACACTTTCAACAATGCAAAGTGTTGACAAGGTTCTGAAATCTGAAACGGCCCTCATTTGTTTGGTAGCGTTTGTCTGCCGCATCCCCATTTTGAATAAATATGTACCCTCCAAAATCTTCAATTTCCGATTCACACATCCCCTAATTCCCCTCCATATATATTCTCCCCTCCCATTACATTCCTCTCCTAAATTCTCTCCCACCAGTCATTTTCCCGCACTTTTTCTCCCCCCACCCCCACACAATTTTCTCGGTAACCAAACAGCTCTTTTCTCTGACTCCAAACCCTTTGTTTCTACAGAGCCATCAGCCATGGCTGTCACTTCCAGAGCCCGGCCCTCCCACCTCCAAATCCCCAGCAAATGGCGCGACTCGGAAACCAGTCCGGACCGGATTAGTTCGGCCCAGACCGGTCCCAGTCTCCCCATCACTCCCCAAAAAGTCCCTGTCGTTTACTACCTCTCCAGGAACGGCCAGCTCGAGCACCCTCACTTCATGGAAGTCCCTCTCTCCTCTCCCCGTGGCCTCTTTCTCAAAGATGTTATTAACCGGTTGAACTTGCTACGTGGCAAGGGCATGGCTTTGATGTACTCCTGGTCTTCCAAACGGAGCTACAAAACCGGCTTCGTGTGGCATGATTTGACGGAGGACGACTTGATACACCCGTCGCACGGCCACGAGTACGTGCTCAAGGGGTCGGAGCTTCTTGACCCGCCGCTGAACCATCTGGCTCTCGAGGCGGCGTCGTCGAGGTCTCTGAGACCGCCGCCAGAGGCGCTGAAGTCCGCCGAAGATTTCGAATCTCCGGTGATTTCACGCCGGCGAAACCAGTCGTGGAATTCGATCGATTTGAACGAGTACAAGGTGTACAAGACCGAGTCAGTCGGCGAGTCCGCCAGGAAAGCGGCCGCCGACGCGTCGACTCAGACCGACGAAAAACGGCACCGACGTCGTGTTGTTCGAGACGAGCACGAGGAAAAAGGTCAAGGTCAAAGTCAGCGCGAGGTGATTCGGATTCAGAGTCAGAGTACGGAGCTGAGCAGGGGCGAGATTTCGCCTCCGCCGTCTGATTCGAGCCCCGAAACGCTCGAGTCGCTGATGAAGGCGGATGGGCGGCTGGTGCTCTGCACGAACGGGGCGAACGAGGAGGAGGCAGTGAACCAGACGGCTGAGATCTGTCCAACTGGGAAGATGAAGGCGTCAACAGTCCTGATGCAATTGTTATCGTGCGGCTCGATCTCGTTCAGGGACTGCGGATCCACGGCGGTGAGGGAGCAGGGGTTCTCGCTGATTGGGCATTACAAGCCTAGGCTGCCACGTGGCGTGACCGGAAATCAGGTCGGGACGGAGAGCGTAATTTCGAATTTAGCGGGGGTAAAATTGGAAGATAAGGAGTATTTTAGCGGGAGCTTAATTGAGACCAAGAAAGAGGCGGTTCCGTCTTTAAAGAGGTCTTCTTCTTACAATGCAGATAGGAGTGCGCAGCTGCAATTGGAGGAAACAGAGAAAGGTGGAGTGCGAGCAAAGTGCATTCCCAGGAAACCCAAAGGAATACCCACCAAGAGAGAGATCAACCACATCGCCTCTAGTAGTGATGGCAGTTGTACTAGTAGTCATGTAGGAGGGAGCAAACGACTCGAGGTTCATCAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF966

Protein Analysis

559

Amino Acids

61.76

Weight (kDa)

9.17

Isoelectric Point (pI)

61.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SOK PF06136 156 - 244 4.4e-49 SOSEKI protein DIX-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 976
Acc16I TGCGCA 1 cut(s) 1506
AccB1I GGYRCC 1 cut(s) 966
AccB7I CCANNNNNTGG 1 cut(s) 387
AccI GTMKAC 1 cut(s) 944
AccII CGCG 3 cut(s) 393, 941, 1026
AccIII TCCGGA 1 cut(s) 409
AclWI GGATC 2 cut(s) 1275, 1288
AcoI YGGCCR 3 cut(s) 496, 697, 930
AcsI RAATTY 3 cut(s) 215, 862, 1387
AcuI CTGAAG 1 cut(s) 824
AcvI CACGTG 1 cut(s) 1343
AcyI GRCGYC 3 cut(s) 767, 973, 1223
AfaI GTAC 7 cut(s) 129, 614, 707, 884, 893, 1054, 1630
AfiI CCNNNNNNNGG 3 cut(s) 357, 387, 695
AflIII ACRYGT 1 cut(s) 939
AgeI ACCGGT 2 cut(s) 434, 573
AgsI TTSAA 5 cut(s) 33, 118, 145, 580, 877
AhlI ACTAGT 1 cut(s) 1631
AjnI CCWGG 4 cut(s) 488, 617, 920, 1559
AleI CACNNNNGTG 1 cut(s) 1289
AloI GAACNNNNNNTCC 2 cut(s) 1289, 1321
AluBI AGCT 7 cut(s) 290, 502, 636, 727, 1060, 1434, 1510
AluI AGCT 7 cut(s) 290, 502, 636, 727, 1060, 1434, 1510
Alw21I GWGCWC 5 cut(s) 8, 510, 714, 996, 1149
Alw26I GTCTC 5 cut(s) 449, 778, 783, 981, 1436
AlwI GGATC 2 cut(s) 1275, 1288
AlwNI CAGNNNCTG 1 cut(s) 1275
Ama87I CYCGRG 4 cut(s) 503, 758, 1112, 1661
Aor13HI TCCGGA 1 cut(s) 409
AoxI GGCC 7 cut(s) 72, 359, 426, 496, 547, 697, 930
ApeKI GCWGC 3 cut(s) 1336, 1507, 1510
ApoI RAATTY 3 cut(s) 215, 862, 1387
AsiGI ACCGGT 2 cut(s) 434, 573
AspA2I CCTAGG 1 cut(s) 1331
AspLEI GCGC 4 cut(s) 393, 802, 1026, 1507
AspS9I GGNCC 5 cut(s) 73, 360, 412, 427, 437
AsuC2I CCSGG 1 cut(s) 358
AsuHPI GGTGA 3 cut(s) 844, 1042, 1303
AsuII TTCGAA 2 cut(s) 822, 1385
AvaI CYCGRG 4 cut(s) 503, 758, 1112, 1661
AvaII GGWCC 2 cut(s) 412, 437
AvrII CCTAGG 1 cut(s) 1331
BaeI ACNNNNGTAYC 2 cut(s) 674, 707
BamHI GGATCC 1 cut(s) 1280
BanI GGYRCC 1 cut(s) 966
BanII GRGCYC 2 cut(s) 358, 1103
BauI CACGAG 2 cut(s) 701, 995
BbrPI CACGTG 1 cut(s) 1343
BbsI GAAGAC 2 cut(s) 615, 1470
Bbv12I GWGCWC 5 cut(s) 8, 510, 714, 996, 1149
BbvI GCAGC 3 cut(s) 1323, 1497, 1519
BccI CCATC 5 cut(s) 337, 458, 756, 1127, 1613
BceAI ACGGC 7 cut(s) 87, 511, 712, 980, 1072, 1206, 1302
BcgI CGANNNNNNTGC 6 cut(s) 956, 990, 1533, 1567, 1642, 1676
BciT130I CCWGG 4 cut(s) 490, 619, 922, 1561
BcnI CCSGG 1 cut(s) 358
BcoDI GTCTC 5 cut(s) 449, 778, 783, 981, 1436
BcuI ACTAGT 1 cut(s) 1631
BfaI CTAG 3 cut(s) 1332, 1611, 1632
BfmI CTRYAG 1 cut(s) 321
BfoI RGCGCY 1 cut(s) 803
BglII AGATCT 1 cut(s) 1197
BlnI CCTAGG 1 cut(s) 1331
BlpI GCTNAGC 1 cut(s) 1061
Bme1390I CCNGG 5 cut(s) 358, 490, 619, 922, 1561
Bme18I GGWCC 2 cut(s) 412, 437
BmeT110I CYCGRG 4 cut(s) 503, 758, 1112, 1661
BmgT120I GGNCC 5 cut(s) 73, 360, 412, 427, 437
BmiI GGNNCC 4 cut(s) 439, 968, 1282, 1461
BmrFI CCNGG 5 cut(s) 358, 490, 619, 922, 1561
BmrI ACTGGG 2 cut(s) 435, 1218
BmsI GCATC 2 cut(s) 114, 1227
BmuI ACTGGG 2 cut(s) 435, 1218
BpiI GAAGAC 2 cut(s) 615, 1470
BpmI CTGGAG 1 cut(s) 472
Bpu1102I GCTNAGC 1 cut(s) 1061
Bpu14I TTCGAA 2 cut(s) 822, 1385
BpuEI CTTGAG 1 cut(s) 698
BpuMI CCSGG 1 cut(s) 358
Bsa29I ATCGAT 1 cut(s) 870
BsaAI YACGTR 3 cut(s) 590, 709, 1343
BsaHI GRCGYC 3 cut(s) 767, 973, 1223
BsaI GGTCTC 3 cut(s) 778, 783, 1436
BsaJI CCNNGG 5 cut(s) 336, 544, 1284, 1331, 1559
BsaWI WCCGGW 6 cut(s) 409, 414, 434, 573, 829, 1352
BsaXI ACNNNNNCTCC 6 cut(s) 234, 264, 470, 500, 1289, 1319
Bsc4I CCNNNNNNNGG 3 cut(s) 357, 387, 695
Bse118I RCCGGY 4 cut(s) 434, 573, 644, 843
Bse1I ACTGG 5 cut(s) 228, 405, 441, 853, 1213
BseAI TCCGGA 1 cut(s) 409
BseBI CCWGG 4 cut(s) 490, 619, 922, 1561
BseCI ATCGAT 1 cut(s) 870
BseDI CCNNGG 5 cut(s) 336, 544, 1284, 1331, 1559
BseGI GGATG 3 cut(s) 105, 160, 1138
BseLI CCNNNNNNNGG 3 cut(s) 357, 387, 695
BseMII CTCAG 4 cut(s) 773, 962, 1052, 1185
BseNI ACTGG 5 cut(s) 228, 405, 441, 853, 1213
BseRI GAGGAG 3 cut(s) 526, 1184, 1187
BseX3I CGGCCG 1 cut(s) 930
BseXI GCAGC 3 cut(s) 1323, 1497, 1519
BseYI CCCAGC 1 cut(s) 380
BsgI GTGCAG 1 cut(s) 1135
Bsh1236I CGCG 3 cut(s) 393, 941, 1026
Bsh1285I CGRYCG 2 cut(s) 870, 933
BshFI GGCC 7 cut(s) 74, 361, 428, 498, 549, 699, 932
BshNI GGYRCC 1 cut(s) 966
BshTI ACCGGT 2 cut(s) 434, 573
BshVI ATCGAT 1 cut(s) 870
BsiEI CGRYCG 2 cut(s) 870, 933
BsiHKAI GWGCWC 5 cut(s) 8, 510, 714, 996, 1149
BsiHKCI CYCGRG 4 cut(s) 503, 758, 1112, 1661
BsiSI CCGG 9 cut(s) 358, 410, 415, 435, 574, 645, 830, 844, 1353
BslFI GGGAC 5 cut(s) 423, 452, 512, 1286, 1381
BslI CCNNNNNNNGG 3 cut(s) 357, 387, 695
BsmAI GTCTC 5 cut(s) 449, 778, 783, 981, 1436
BsmBI CGTCTC 1 cut(s) 981
BsmFI GGGAC 5 cut(s) 423, 452, 512, 1286, 1381
BsmI GAATGC 1 cut(s) 1554
BsnI GGCC 7 cut(s) 74, 361, 428, 498, 549, 699, 932
Bso31I GGTCTC 3 cut(s) 778, 783, 1436
BsoBI CYCGRG 4 cut(s) 503, 758, 1112, 1661
Bsp119I TTCGAA 2 cut(s) 822, 1385
Bsp1286I GDGCHC 7 cut(s) 8, 358, 510, 714, 996, 1103, 1149
Bsp13I TCCGGA 1 cut(s) 409
Bsp1407I TGTACA 1 cut(s) 891
Bsp143I GATC 5 cut(s) 867, 1197, 1260, 1280, 1593
Bsp1720I GCTNAGC 1 cut(s) 1061
Bsp19I CCATGG 1 cut(s) 336
BspANI GGCC 7 cut(s) 74, 361, 428, 498, 549, 699, 932
BspCNI CTCAG 4 cut(s) 774, 961, 1053, 1186
BspDI ATCGAT 1 cut(s) 870
BspEI TCCGGA 1 cut(s) 409
BspFNI CGCG 3 cut(s) 393, 941, 1026
BspLI GGNNCC 4 cut(s) 439, 968, 1282, 1461
BspPI GGATC 2 cut(s) 1275, 1288
BspT104I TTCGAA 2 cut(s) 822, 1385
BspT107I GGYRCC 1 cut(s) 966
BspTNI GGTCTC 3 cut(s) 778, 783, 1436
BsrFI RCCGGY 4 cut(s) 434, 573, 644, 843
BsrGI TGTACA 1 cut(s) 891
BsrI ACTGG 5 cut(s) 228, 405, 441, 853, 1213
BssAI RCCGGY 4 cut(s) 434, 573, 644, 843
BssECI CCNNGG 5 cut(s) 336, 544, 1284, 1331, 1559
BssMI GATC 5 cut(s) 867, 1197, 1260, 1280, 1593
BssNI GRCGYC 3 cut(s) 767, 973, 1223
BssSI CACGAG 2 cut(s) 701, 995
BssT1I CCWWGG 2 cut(s) 336, 1331
Bst2BI CACGAG 2 cut(s) 701, 995
Bst2UI CCWGG 4 cut(s) 490, 619, 922, 1561
Bst4CI ACNGT 1 cut(s) 1231
BstACI GRCGYC 3 cut(s) 767, 973, 1223
BstAUI TGTACA 1 cut(s) 891
BstBAI YACGTR 3 cut(s) 590, 709, 1343
BstBI TTCGAA 2 cut(s) 822, 1385
BstC8I GCNNGC 3 cut(s) 500, 845, 1545
BstDEI CTNAG 4 cut(s) 782, 948, 1061, 1194
BstDSI CCRYGG 3 cut(s) 336, 544, 1284
BstEII GGTNACC 1 cut(s) 278
BstF5I GGATG 3 cut(s) 105, 160, 1138
BstFNI CGCG 3 cut(s) 393, 941, 1026
BstH2I RGCGCY 1 cut(s) 803
BstHHI GCGC 4 cut(s) 393, 802, 1026, 1507
BstKTI GATC 5 cut(s) 870, 1200, 1263, 1283, 1596
BstMAI GTCTC 5 cut(s) 449, 778, 783, 981, 1436
BstMBI GATC 5 cut(s) 867, 1197, 1260, 1280, 1593
BstMCI CGRYCG 2 cut(s) 870, 933
BstNI CCWGG 4 cut(s) 490, 619, 922, 1561
BstPI GGTNACC 1 cut(s) 278
BstSCI CCNGG 5 cut(s) 356, 488, 617, 920, 1559
BstSFI CTRYAG 1 cut(s) 321
BstUI CGCG 3 cut(s) 393, 941, 1026
BstV1I GCAGC 3 cut(s) 1323, 1497, 1519
BstV2I GAAGAC 2 cut(s) 615, 1470
BstX2I RGATCY 2 cut(s) 1197, 1280
BstYI RGATCY 2 cut(s) 1197, 1280
BstZI CGGCCG 1 cut(s) 930
Bsu15I ATCGAT 1 cut(s) 870
BsuRI GGCC 7 cut(s) 74, 361, 428, 498, 549, 699, 932
BsuTUI ATCGAT 1 cut(s) 870
BtgI CCRYGG 3 cut(s) 336, 544, 1284
BtgZI GCGATG 1 cut(s) 1588
BtsCI GGATG 3 cut(s) 105, 160, 1138
BtsI GCAGTG 1 cut(s) 1185
BtsIMutI CAGTG 1 cut(s) 1185
Cac8I GCNNGC 3 cut(s) 500, 845, 1545
CaiI CAGNNNCTG 1 cut(s) 1275
CciNI GCGGCCGC 1 cut(s) 930
CfoI GCGC 4 cut(s) 393, 802, 1026, 1507
Cfr10I RCCGGY 4 cut(s) 434, 573, 644, 843
Cfr13I GGNCC 5 cut(s) 73, 360, 412, 427, 437
ClaI ATCGAT 1 cut(s) 870
CpoI CGGWCCG 1 cut(s) 412
CseI GACGC 4 cut(s) 756, 930, 947, 1212
Csp6I GTAC 7 cut(s) 128, 613, 706, 883, 892, 1053, 1629
CspAI ACCGGT 2 cut(s) 434, 573
CspI CGGWCCG 1 cut(s) 412
CviAII CATG 5 cut(s) 337, 520, 601, 659, 1640
CviQI GTAC 7 cut(s) 128, 613, 706, 883, 892, 1053, 1629
DdeI CTNAG 4 cut(s) 782, 948, 1061, 1194
DpnI GATC 5 cut(s) 869, 1199, 1262, 1282, 1595
DpnII GATC 5 cut(s) 867, 1197, 1260, 1280, 1593
DraI TTTAAA 1 cut(s) 1470
EaeI YGGCCR 3 cut(s) 496, 697, 930
EagI CGGCCG 1 cut(s) 930
EciI GGCGGA 4 cut(s) 799, 907, 1074, 1145
EclXI CGGCCG 1 cut(s) 930
Eco130I CCWWGG 2 cut(s) 336, 1331
Eco24I GRGCYC 2 cut(s) 358, 1103
Eco31I GGTCTC 3 cut(s) 778, 783, 1436
Eco47I GGWCC 2 cut(s) 412, 437
Eco52I CGGCCG 1 cut(s) 930
Eco57I CTGAAG 1 cut(s) 824
Eco72I CACGTG 1 cut(s) 1343
Eco88I CYCGRG 4 cut(s) 503, 758, 1112, 1661
Eco91I GGTNACC 1 cut(s) 278
EcoO65I GGTNACC 1 cut(s) 278
EcoRI GAATTC 1 cut(s) 862
EcoRII CCWGG 4 cut(s) 488, 617, 920, 1559
EcoT14I CCWWGG 2 cut(s) 336, 1331
EcoT38I GRGCYC 2 cut(s) 358, 1103
ErhI CCWWGG 2 cut(s) 336, 1331
Esp3I CGTCTC 1 cut(s) 981
FaeI CATG 5 cut(s) 340, 523, 604, 662, 1643
FaqI GGGAC 5 cut(s) 423, 452, 512, 1286, 1381
FatI CATG 5 cut(s) 336, 519, 600, 658, 1639
FauI CCCGC 4 cut(s) 247, 744, 1387, 1421
FblI GTMKAC 1 cut(s) 944
FokI GGATG 3 cut(s) 92, 147, 1145
FriOI GRGCYC 2 cut(s) 358, 1103
FspBI CTAG 3 cut(s) 1332, 1611, 1632
FspI TGCGCA 1 cut(s) 1506
GlaI GCGC 4 cut(s) 392, 801, 1025, 1506
GsaI CCCAGC 1 cut(s) 384
GsuI CTGGAG 1 cut(s) 472
HaeII RGCGCY 1 cut(s) 803
HaeIII GGCC 7 cut(s) 74, 361, 428, 498, 549, 699, 932
HapII CCGG 9 cut(s) 358, 410, 415, 435, 574, 645, 830, 844, 1353
HgaI GACGC 4 cut(s) 756, 930, 947, 1212
HhaI GCGC 4 cut(s) 393, 802, 1026, 1507
Hin1I GRCGYC 3 cut(s) 767, 973, 1223
Hin1II CATG 5 cut(s) 340, 523, 604, 662, 1643
Hin6I GCGC 4 cut(s) 391, 800, 1024, 1505
HinP1I GCGC 4 cut(s) 391, 800, 1024, 1505
HincII GTYRAC 3 cut(s) 49, 945, 1227
HindII GTYRAC 3 cut(s) 49, 945, 1227
HpaII CCGG 9 cut(s) 358, 410, 415, 435, 574, 645, 830, 844, 1353
HphI GGTGA 3 cut(s) 844, 1042, 1303
Hpy166II GTNNAC 6 cut(s) 49, 478, 892, 945, 1183, 1227
Hpy188III TCNNGA 7 cut(s) 351, 410, 731, 758, 986, 1234, 1366
Hpy8I GTNNAC 6 cut(s) 49, 478, 892, 945, 1183, 1227
Hpy99I CGWCG 8 cut(s) 694, 772, 775, 941, 946, 959, 975, 978
HpyAV CCTTC 2 cut(s) 1120, 1213
HpyCH4III ACNGT 1 cut(s) 1231
HpyCH4IV ACGT 4 cut(s) 589, 708, 973, 1342
HpyCH4V TGCA 6 cut(s) 40, 1152, 1240, 1493, 1513, 1554
HpyF3I CTNAG 4 cut(s) 782, 948, 1061, 1194
HpySE526I ACGT 4 cut(s) 589, 708, 973, 1342
Hsp92I GRCGYC 3 cut(s) 767, 973, 1223
Hsp92II CATG 5 cut(s) 340, 523, 604, 662, 1643
HspAI GCGC 4 cut(s) 391, 800, 1024, 1505
Kpn2I TCCGGA 1 cut(s) 409
KroI GCCGGC 1 cut(s) 843
KroNI GCCGGC 1 cut(s) 845
Kzo9I GATC 5 cut(s) 867, 1197, 1260, 1280, 1593
LmnI GCTCC 6 cut(s) 633, 724, 1057, 1297, 1431, 1650
Lsp1109I GCAGC 3 cut(s) 1323, 1497, 1519
LweI GCATC 2 cut(s) 114, 1227
MaeI CTAG 3 cut(s) 1332, 1611, 1632
MaeII ACGT 4 cut(s) 589, 708, 973, 1342
MaeIII GTNAC 3 cut(s) 278, 343, 1348
MalI GATC 5 cut(s) 869, 1199, 1262, 1282, 1595
MboI GATC 5 cut(s) 867, 1197, 1260, 1280, 1593
MboII GAAGA 7 cut(s) 133, 615, 827, 1225, 1421, 1470, 1473
MfeI CAATTG 2 cut(s) 1241, 1514
MflI RGATCY 2 cut(s) 1197, 1280
MhlI GDGCHC 7 cut(s) 8, 358, 510, 714, 996, 1103, 1149
MluI ACGCGT 1 cut(s) 939
MlyI GAGTC 8 cut(s) 296, 389, 911, 923, 940, 1054, 1124, 1653
MmeI TCCRAC 2 cut(s) 702, 1229
MreI CGCCGGCG 1 cut(s) 843
MroI TCCGGA 1 cut(s) 409
MroNI GCCGGC 1 cut(s) 843
MseI TTAA 3 cut(s) 570, 1436, 1469
MslI CAYNNNNRTG 1 cut(s) 1289
MspA1I CMGCKG 2 cut(s) 742, 1510
MspI CCGG 9 cut(s) 358, 410, 415, 435, 574, 645, 830, 844, 1353
MspR9I CCNGG 5 cut(s) 358, 490, 619, 922, 1561
MunI CAATTG 2 cut(s) 1241, 1514
Mva1269I GAATGC 1 cut(s) 1554
MvaI CCWGG 4 cut(s) 490, 619, 922, 1561
MvnI CGCG 3 cut(s) 393, 941, 1026
NaeI GCCGGC 1 cut(s) 845
NciI CCSGG 1 cut(s) 358
NcoI CCATGG 1 cut(s) 336
NdeII GATC 5 cut(s) 867, 1197, 1260, 1280, 1593
NgoMIV GCCGGC 1 cut(s) 843
NlaIII CATG 5 cut(s) 340, 523, 604, 662, 1643
NlaIV GGNNCC 4 cut(s) 439, 968, 1282, 1461
NmuCI GTSAC 2 cut(s) 343, 1348
NotI GCGGCCGC 1 cut(s) 930
NsbI TGCGCA 1 cut(s) 1506
NspV TTCGAA 2 cut(s) 822, 1385
OliI CACNNNNGTG 1 cut(s) 1289
PaeR7I CTCGAG 4 cut(s) 503, 758, 1112, 1661
PcsI WCGNNNNNNNCGW 9 cut(s) 501, 863, 876, 970, 982, 1085, 1160, 1164, 1256
PctI GAATGC 1 cut(s) 1554
PdiI GCCGGC 1 cut(s) 845
PfeI GAWTC 5 cut(s) 153, 824, 1033, 1039, 1094
PflFI GACNNNGTC 1 cut(s) 901
PflMI CCANNNNNTGG 1 cut(s) 387
PfoI TCCNGGA 1 cut(s) 488
PinAI ACCGGT 2 cut(s) 434, 573
Ple19I CGATCG 1 cut(s) 870
PleI GAGTC 8 cut(s) 296, 389, 910, 922, 940, 1053, 1123, 1653
PmaCI CACGTG 1 cut(s) 1343
PmlI CACGTG 1 cut(s) 1343
PpsI GAGTC 8 cut(s) 296, 389, 910, 922, 940, 1053, 1123, 1653
Ppu21I YACGTR 3 cut(s) 590, 709, 1343
Psp6I CCWGG 4 cut(s) 488, 617, 920, 1559
PspCI CACGTG 1 cut(s) 1343
PspEI GGTNACC 1 cut(s) 278
PspFI CCCAGC 1 cut(s) 380
PspGI CCWGG 4 cut(s) 488, 617, 920, 1559
PspN4I GGNNCC 4 cut(s) 439, 968, 1282, 1461
PspPI GGNCC 5 cut(s) 73, 360, 412, 427, 437
PspXI VCTCGAGB 3 cut(s) 503, 1112, 1661
PstNI CAGNNNCTG 1 cut(s) 1275
PsuI RGATCY 2 cut(s) 1197, 1280
PsyI GACNNNGTC 1 cut(s) 901
PvuI CGATCG 1 cut(s) 870
PvuII CAGCTG 1 cut(s) 1510
RsaI GTAC 7 cut(s) 129, 614, 707, 884, 893, 1054, 1630
RsaNI GTAC 7 cut(s) 128, 613, 706, 883, 892, 1053, 1629
RseI CAYNNNNRTG 1 cut(s) 1289
Rsr2I CGGWCCG 1 cut(s) 412
RsrII CGGWCCG 1 cut(s) 412
SalI GTCGAC 1 cut(s) 943
SaqAI TTAA 3 cut(s) 570, 1436, 1469
Sau3AI GATC 5 cut(s) 867, 1197, 1260, 1280, 1593
Sau96I GGNCC 5 cut(s) 73, 360, 412, 427, 437
SchI GAGTC 8 cut(s) 296, 389, 911, 923, 940, 1054, 1124, 1653
ScrFI CCNGG 5 cut(s) 358, 490, 619, 922, 1561
SduI GDGCHC 7 cut(s) 8, 358, 510, 714, 996, 1103, 1149
SfaNI GCATC 2 cut(s) 114, 1227
SfcI CTRYAG 1 cut(s) 321
Sfr274I CTCGAG 4 cut(s) 503, 758, 1112, 1661
SfuI TTCGAA 2 cut(s) 822, 1385
SgrAI CRCCGGYG 1 cut(s) 843
SinI GGWCC 2 cut(s) 412, 437
SlaI CTCGAG 4 cut(s) 503, 758, 1112, 1661
SmiMI CAYNNNNRTG 1 cut(s) 1289
SmlI CTYRAG 5 cut(s) 503, 713, 758, 1112, 1661
SmoI CTYRAG 5 cut(s) 503, 713, 758, 1112, 1661
SpeI ACTAGT 1 cut(s) 1631
SspMI CTAG 3 cut(s) 1332, 1611, 1632
StyD4I CCNGG 5 cut(s) 356, 488, 617, 920, 1559
StyI CCWWGG 2 cut(s) 336, 1331
TaaI ACNGT 1 cut(s) 1231
TaiI ACGT 4 cut(s) 592, 711, 976, 1345
TaqII GACCGA 2 cut(s) 914, 968
TatI WGTACW 4 cut(s) 612, 882, 891, 1628
TauI GCSGC 8 cut(s) 105, 742, 767, 793, 932, 935, 1141, 1257
TfiI GAWTC 5 cut(s) 153, 824, 1033, 1039, 1094
Tru1I TTAA 3 cut(s) 570, 1436, 1469
Tru9I TTAA 3 cut(s) 570, 1436, 1469
TscAI CASTG 1 cut(s) 1185
TseFI GTSAC 2 cut(s) 343, 1348
TseI GCWGC 3 cut(s) 1336, 1507, 1510
Tsp45I GTSAC 2 cut(s) 343, 1348
TspDTI ATGAA 4 cut(s) 508, 1139, 1232, 1658
TspGWI ACGGA 5 cut(s) 646, 683, 1070, 1385, 1452
TspRI CASTG 1 cut(s) 1185
Tth111I GACNNNGTC 1 cut(s) 901
Van91I CCANNNNNTGG 1 cut(s) 387
VpaK11BI GGWCC 2 cut(s) 412, 437
XapI RAATTY 3 cut(s) 215, 862, 1387
XhoI CTCGAG 4 cut(s) 503, 758, 1112, 1661
XmaJI CCTAGG 1 cut(s) 1331
XmiI GTMKAC 1 cut(s) 944
XspI CTAG 3 cut(s) 1332, 1611, 1632
ZraI GACGTC 1 cut(s) 974
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.