Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr11

Orthogroup ID

OG0010087

Physical Location & Seq

Genomic Coordinates Reverse (-)

9798626 .. 9802386

Gene Structure 3761 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1680 bp

ATGGCGAGTCGACTCGTTCTCGCATTCGCACTCAGTGCCCTCCTCTTTTTCTCCCACTCGGTTCTCTGCAAGGACTCGCACCCTACCGACGACGACGACGAGGATCTCAGCTTCCTCGAGGAGCCCACTGACCACGGCGACGCCGCGCCGCACTATCCAGATTCGGACCACTACGACGAGGACAATTTCGACGATCTCGAGAACTACTCCGATTTCGACGAGGGCGGCGATCATGAGGACTCGTACAAGCAGCCAGAGGTAGACGAGAAGGACGTCGTCGTTTTGAAGGCGGCGAACTTCAGCGATGCAGTGGAGAAGAATAGATTCATGATGGTCGAGTTCTACGCGCCGTGGTGCGGACACTGCCAGGCCTTGAACCCGGAGTACGCGGCGGCAGCCACCGAGCTCAAGGGCGAAGATGTAGTTTTGGCCAAGGTTGACGCCACGGAGGAGAACGAGCTGTCGCAGGAGTACGGCGTCGAGGGTTTCCCGACTATCTTCTTCTTCATTGATGGCGTTCACAAGCCTTACACAGGCCAAAGAACCAAGGAGGGAATTGTAACCTGGATTAAGAAAAAGATTGGACCTGGAATTCAAAACGTGACCACATTGGAAGATGCTGAACGTATTTTGACTGCTGAAAGTAAAGTCGTTTTGGGCTACCTCAACTCTCTGGTGGGTCCTGAGAGTGACGAGCTTGCTGCTGCTTCAAGACTTGAAGATGAGGTCACCTTTTACCAAACTGTAGATCCCAAGGTGGCAAAACTTTTCCATCTTGATGCTGAAGTTAAGCGCCCTGCTTTGGTCCTGCTAAAGAAGGAGGCTGAGAAACTAAGTTATTTTGATGGTAAATTTGATAAGTCTGCAATTGCCGAGTTTGTCTTTGCCAACAAGCTTCCTTTGGTTATCACTTTTACTAGGGATAATGCCCCACAAATTTTTGAAAGTACAATCAAGAAACAGCTGTTGCTGTTTGCCACTTCAAAAGATTCAGAGAAGTCTCTCCCTGAATTTCAAAAGGCTGCACAACTTTTCAAAGGAAAGCTTATCTTTGTATATGTGGAAACGGATAACGAAGATATCGGAAAGCCAGTTTCAGATTATTTTGGTGTTACTAGTGAAGCTCCAACAGTTCTTGGGTATACCGGAAATGATGATGGTAGGAAATTTGTTCTTGACGGAGAGACTTTTGGGGAGGACTTTATTGAGGACAAACTTAAACCTTTCTACAAGTCAGATCCAATTCCTGAAACTAACGACGGGGATGTGAAGATAGTGGTTGGGAATAATTTTGATGACATTGTCTTGGACGAGTCAAAGGATGTTCTTCTTGAGATTTATGCACCCTGGTGTGGGCATTGCCAATCTCTGGAGCCAACCTACAACAAGCTTGCCAAACATTTACGAGGCATTGACTCTATTGTTATAGCCAAGATGGACGGAACCACAAATGAGCATCCCAGGGGAAAGGCTGATGGGTTCCCCACACTTCTATTCTTCCCAGCGGGAAATAAGAGCTTTGATCCAGTAATGGTGGCATTCTACAAGTTTCTCAAGAAAAACGCATCAATCCCTTTCAAGCTCCAGAAGCCAGCATCAACGCCAAAATCAGAGGGGTCTGCTGCAACAGAAAGCCAAGGGAGCAGCAGCAGCGCAGACGATTCGAAGGATGAACTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003756 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005773 GO:0005774 GO:0005783 GO:0006457 GO:0006950 GO:0006979 GO:0008150 GO:0009507 GO:0009536 GO:0009987 GO:0012505 GO:0016020 GO:0016853 GO:0016860 GO:0016864 GO:0031090 GO:0033554 GO:0034976 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0051716 GO:0098588 GO:0098805 GO:0140096

KEGG Pathways

Metabolic & Signaling

ko04141 map04141

Pfam Domains

Protein Families

Thioredoxin Thioredoxin_6

Protein Analysis

560

Amino Acids

62.13

Weight (kDa)

4.57

Isoelectric Point (pI)

33.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Thioredoxin	PF00085	92 - 192	6e-30	Thioredoxin
Thioredoxin_7	PF13899	101 - 169	7e-07	Thioredoxin-like
Thioredoxin_2	PF13098	105 - 179	7.5e-07	Thioredoxin-like domain
Thioredoxin_6	PF13848	233 - 409	1.4e-22	Thioredoxin-like domain
Thioredoxin	PF00085	423 - 506	1.4e-19	Thioredoxin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0010087)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G54960 AT3G54960 AT5G60640 AT5G60640 AT5G60640
fragaria_vesca	FvH4_3g32410
malus_domestica	MD03G1117500.v1.1 MD11G1135800.v1.1 MD13G1134800.v1.1
prunus_persica	Prupe.6G101200_v2.0.a1
pyrus_communis	pycom11g11260
rosa_chinensis	RchiOBHm_Chr5g0059381
rosa_laevigata	RLG00000035286
rosa_multiflora	Rmu_sc0000375.1_g000007
rosa_roxburghii	Rroxscaffold_1G00021150
rosa_rugosa	Rorug05G0322600
rosa_samantha	Rh5AG387100 Rh5BG398400 Rh5CG422400 Rh5DG414200
rosa_wichuraiana	Rw5G036420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	276
AbsI	CCTCGAGG	1 cut(s)	116
AccB7I	CCANNNNNTGG	1 cut(s)	1369
AccI	GTMKAC	3 cut(s)	10, 261, 1142
AccII	CGCG	3 cut(s)	146, 347, 389
AciI	CCGC	8 cut(s)	144, 149, 225, 290, 357, 389, 392, 1505
AclWI	GGATC	4 cut(s)	111, 743, 1232, 1517
AcoI	YGGCCR	1 cut(s)	429
AcsI	RAATTY	5 cut(s)	591, 851, 936, 1010, 1166
AcuI	CTGAAG	2 cut(s)	283, 804
AcyI	GRCGYC	4 cut(s)	141, 273, 441, 477
AdeI	CACNNNGTG	1 cut(s)	35
AfaI	GTAC	4 cut(s)	245, 386, 473, 949
AfiI	CCNNNNNNNGG	6 cut(s)	356, 533, 802, 1352, 1353, 1369
AhlI	ACTAGT	1 cut(s)	1115
AjnI	CCWGG	5 cut(s)	366, 563, 586, 1346, 1460
AleI	CACNNNNGTG	1 cut(s)	1348
Alw21I	GWGCWC	1 cut(s)	408
Alw26I	GTCTC	2 cut(s)	1005, 1178
AlwI	GGATC	4 cut(s)	111, 743, 1232, 1517
Ama87I	CYCGRG	2 cut(s)	116, 197
AoxI	GGCC	3 cut(s)	369, 429, 535
ApeKI	GCWGC	9 cut(s)	250, 395, 701, 704, 1022, 1622, 1644, 1647, 1650
ApoI	RAATTY	5 cut(s)	591, 851, 936, 1010, 1166
Asp700I	GAANNNNTTC	1 cut(s)	323
AspLEI	GCGC	4 cut(s)	148, 349, 795, 1655
AspS9I	GGNCC	4 cut(s)	166, 584, 680, 805
AsuC2I	CCSGG	1 cut(s)	380
AsuHPI	GGTGA	1 cut(s)	721
AsuII	TTCGAA	1 cut(s)	1664
AvaI	CYCGRG	2 cut(s)	116, 197
AvaII	GGWCC	4 cut(s)	166, 584, 680, 805
BaeGI	GKGCMC	1 cut(s)	40
BalI	TGGCCA	1 cut(s)	431
BanII	GRGCYC	2 cut(s)	126, 408
Bbv12I	GWGCWC	1 cut(s)	408
BbvI	GCAGC	9 cut(s)	262, 407, 688, 691, 1009, 1609, 1656, 1659, 1662
BccI	CCATC	7 cut(s)	325, 506, 780, 839, 1151, 1429, 1469
BceAI	ACGGC	3 cut(s)	151, 334, 490
BcgI	CGANNNNNNTGC	4 cut(s)	683, 717, 1644, 1678
BciT130I	CCWGG	5 cut(s)	368, 565, 588, 1348, 1462
BcnI	CCSGG	1 cut(s)	380
BcoDI	GTCTC	2 cut(s)	1005, 1178
BcuI	ACTAGT	1 cut(s)	1115
BfaI	CTAG	2 cut(s)	918, 1116
BfmI	CTRYAG	1 cut(s)	744
BfoI	RGCGCY	1 cut(s)	796
Bme1390I	CCNGG	6 cut(s)	368, 380, 565, 588, 1348, 1462
Bme18I	GGWCC	4 cut(s)	166, 584, 680, 805
BmeT110I	CYCGRG	2 cut(s)	116, 197
BmgT120I	GGNCC	4 cut(s)	166, 584, 680, 805
BmiI	GGNNCC	5 cut(s)	123, 681, 1374, 1444, 1481
BmrFI	CCNGG	6 cut(s)	368, 380, 565, 588, 1348, 1462
BmsI	GCATC	6 cut(s)	295, 607, 769, 1465, 1574, 1604
BplI	GAGNNNNNCTC	2 cut(s)	191, 223
BpmI	CTGGAG	2 cut(s)	1391, 1568
Bpu14I	TTCGAA	1 cut(s)	1664
BpuEI	CTTGAG	3 cut(s)	392, 1352, 1538
BpuMI	CCSGG	1 cut(s)	380
BsaHI	GRCGYC	4 cut(s)	141, 273, 441, 477
BsaWI	WCCGGW	1 cut(s)	1145
Bsc4I	CCNNNNNNNGG	6 cut(s)	356, 533, 802, 1352, 1353, 1369
Bse1I	ACTGG	2 cut(s)	1091, 1526
Bse3DI	GCAATG	1 cut(s)	1357
BseBI	CCWGG	5 cut(s)	368, 565, 588, 1348, 1462
BseGI	GGATG	4 cut(s)	1270, 1327, 1456, 1675
BseLI	CCNNNNNNNGG	6 cut(s)	356, 533, 802, 1352, 1353, 1369
BseMI	GCAATG	1 cut(s)	1357
BseMII	CTCAG	4 cut(s)	46, 121, 675, 816
BseNI	ACTGG	2 cut(s)	1091, 1526
BseRI	GAGGAG	3 cut(s)	32, 134, 464
BseSI	GKGCMC	1 cut(s)	40
BseXI	GCAGC	9 cut(s)	262, 407, 688, 691, 1009, 1609, 1656, 1659, 1662
BseYI	CCCAGC	1 cut(s)	1501
BsgI	GTGCAG	1 cut(s)	1008
Bsh1236I	CGCG	3 cut(s)	146, 347, 389
BshFI	GGCC	3 cut(s)	371, 431, 537
BsiHKAI	GWGCWC	1 cut(s)	408
BsiHKCI	CYCGRG	2 cut(s)	116, 197
BsiSI	CCGG	2 cut(s)	380, 1146
BslI	CCNNNNNNNGG	6 cut(s)	356, 533, 802, 1352, 1353, 1369
BsmAI	GTCTC	2 cut(s)	1005, 1178
BsmI	GAATGC	2 cut(s)	23, 1538
BsnI	GGCC	3 cut(s)	371, 431, 537
BsoBI	CYCGRG	2 cut(s)	116, 197
Bsp119I	TTCGAA	1 cut(s)	1664
Bsp1286I	GDGCHC	3 cut(s)	40, 126, 408
Bsp143I	GATC	6 cut(s)	103, 193, 229, 748, 1237, 1522
BspACI	CCGC	8 cut(s)	144, 149, 225, 290, 357, 389, 392, 1505
BspANI	GGCC	3 cut(s)	371, 431, 537
BspCNI	CTCAG	4 cut(s)	45, 120, 676, 817
BspFNI	CGCG	3 cut(s)	146, 347, 389
BspHI	TCATGA	2 cut(s)	232, 327
BspLI	GGNNCC	5 cut(s)	123, 681, 1374, 1444, 1481
BspPI	GGATC	4 cut(s)	111, 743, 1232, 1517
BspT104I	TTCGAA	1 cut(s)	1664
BsrDI	GCAATG	1 cut(s)	1357
BsrI	ACTGG	2 cut(s)	1091, 1526
BssMI	GATC	6 cut(s)	103, 193, 229, 748, 1237, 1522
BssNAI	GTATAC	1 cut(s)	1143
BssNI	GRCGYC	4 cut(s)	141, 273, 441, 477
BssT1I	CCWWGG	4 cut(s)	432, 546, 753, 1636
Bst1107I	GTATAC	1 cut(s)	1143
Bst2UI	CCWGG	5 cut(s)	368, 565, 588, 1348, 1462
Bst4CI	ACNGT	2 cut(s)	745, 1132
BstACI	GRCGYC	4 cut(s)	141, 273, 441, 477
BstAPI	GCANNNNNTGC	1 cut(s)	35
BstBI	TTCGAA	1 cut(s)	1664
BstC8I	GCNNGC	3 cut(s)	699, 1392, 1593
BstDEI	CTNAG	5 cut(s)	32, 107, 684, 825, 833
BstDSI	CCRYGG	3 cut(s)	133, 350, 444
BstEII	GGTNACC	1 cut(s)	727
BstENI	CCTNNNNNAGG	1 cut(s)	531
BstF5I	GGATG	4 cut(s)	1270, 1327, 1456, 1675
BstFNI	CGCG	3 cut(s)	146, 347, 389
BstH2I	RGCGCY	1 cut(s)	796
BstHHI	GCGC	4 cut(s)	148, 349, 795, 1655
BstKTI	GATC	6 cut(s)	106, 196, 232, 751, 1240, 1525
BstMAI	GTCTC	2 cut(s)	1005, 1178
BstMBI	GATC	6 cut(s)	103, 193, 229, 748, 1237, 1522
BstMWI	GCNNNNNNNGC	6 cut(s)	35, 363, 395, 1588, 1641, 1650
BstNI	CCWGG	5 cut(s)	368, 565, 588, 1348, 1462
BstPI	GGTNACC	1 cut(s)	727
BstSCI	CCNGG	6 cut(s)	366, 378, 563, 586, 1346, 1460
BstSFI	CTRYAG	1 cut(s)	744
BstSLI	GKGCMC	1 cut(s)	40
BstUI	CGCG	3 cut(s)	146, 347, 389
BstV1I	GCAGC	9 cut(s)	262, 407, 688, 691, 1009, 1609, 1656, 1659, 1662
BstX2I	RGATCY	3 cut(s)	103, 748, 1237
BstYI	RGATCY	3 cut(s)	103, 748, 1237
BstZ17I	GTATAC	1 cut(s)	1143
BsuRI	GGCC	3 cut(s)	371, 431, 537
BtgI	CCRYGG	3 cut(s)	133, 350, 444
BtgZI	GCGATG	1 cut(s)	318
BtsCI	GGATG	4 cut(s)	1270, 1327, 1456, 1675
BtsI	GCAGTG	2 cut(s)	315, 361
BtsIMutI	CAGTG	4 cut(s)	40, 126, 315, 361
Cac8I	GCNNGC	3 cut(s)	699, 1392, 1593
CciI	TCATGA	2 cut(s)	232, 327
CfoI	GCGC	4 cut(s)	148, 349, 795, 1655
Cfr13I	GGNCC	4 cut(s)	166, 584, 680, 805
CseI	GACGC	3 cut(s)	149, 449, 466
Csp6I	GTAC	4 cut(s)	244, 385, 472, 948
CviAII	CATG	2 cut(s)	233, 328
CviQI	GTAC	4 cut(s)	244, 385, 472, 948
DdeI	CTNAG	5 cut(s)	32, 107, 684, 825, 833
DpnI	GATC	6 cut(s)	105, 195, 231, 750, 1239, 1524
DpnII	GATC	6 cut(s)	103, 193, 229, 748, 1237, 1522
DraIII	CACNNNGTG	1 cut(s)	35
EaeI	YGGCCR	1 cut(s)	429
Ecl136II	GAGCTC	1 cut(s)	406
Eco130I	CCWWGG	4 cut(s)	432, 546, 753, 1636
Eco147I	AGGCCT	1 cut(s)	371
Eco24I	GRGCYC	2 cut(s)	126, 408
Eco32I	GATATC	1 cut(s)	1081
Eco47I	GGWCC	4 cut(s)	166, 584, 680, 805
Eco53kI	GAGCTC	1 cut(s)	406
Eco57I	CTGAAG	2 cut(s)	283, 804
Eco88I	CYCGRG	2 cut(s)	116, 197
Eco91I	GGTNACC	1 cut(s)	727
EcoICRI	GAGCTC	1 cut(s)	406
EcoNI	CCTNNNNNAGG	1 cut(s)	531
EcoO109I	RGGNCCY	1 cut(s)	680
EcoO65I	GGTNACC	1 cut(s)	727
EcoRI	GAATTC	1 cut(s)	591
EcoRII	CCWGG	5 cut(s)	366, 563, 586, 1346, 1460
EcoRV	GATATC	1 cut(s)	1081
EcoT14I	CCWWGG	4 cut(s)	432, 546, 753, 1636
EcoT38I	GRGCYC	2 cut(s)	126, 408
ErhI	CCWWGG	4 cut(s)	432, 546, 753, 1636
FaeI	CATG	2 cut(s)	236, 331
FaiI	YATR	8 cut(s)	234, 329, 1057, 1059, 1143, 1341, 1427, 1678
FalI	AAGNNNNNCTT	4 cut(s)	1029, 1061, 1034, 1066
FatI	CATG	2 cut(s)	232, 327
FauI	CCCGC	1 cut(s)	1498
FblI	GTMKAC	3 cut(s)	10, 261, 1142
FokI	GGATG	3 cut(s)	1277, 1334, 1443
FriOI	GRGCYC	2 cut(s)	126, 408
FspBI	CTAG	2 cut(s)	918, 1116
GlaI	GCGC	4 cut(s)	147, 348, 794, 1654
GsaI	CCCAGC	1 cut(s)	1505
GsuI	CTGGAG	2 cut(s)	1391, 1568
HaeII	RGCGCY	1 cut(s)	796
HaeIII	GGCC	3 cut(s)	371, 431, 537
HapII	CCGG	2 cut(s)	380, 1146
HgaI	GACGC	3 cut(s)	149, 449, 466
HhaI	GCGC	4 cut(s)	148, 349, 795, 1655
Hin1I	GRCGYC	4 cut(s)	141, 273, 441, 477
Hin1II	CATG	2 cut(s)	236, 331
Hin6I	GCGC	4 cut(s)	146, 347, 793, 1653
HinP1I	GCGC	4 cut(s)	146, 347, 793, 1653
HincII	GTYRAC	2 cut(s)	11, 439
HindII	GTYRAC	2 cut(s)	11, 439
HindIII	AAGCTT	3 cut(s)	893, 1043, 1388
HpaII	CCGG	2 cut(s)	380, 1146
HphI	GGTGA	1 cut(s)	721
Hpy166II	GTNNAC	5 cut(s)	11, 262, 439, 520, 1143
Hpy188I	TCNGA	7 cut(s)	166, 211, 994, 1085, 1099, 1237, 1612
Hpy8I	GTNNAC	5 cut(s)	11, 262, 439, 520, 1143
HpyAV	CCTTC	4 cut(s)	262, 280, 811, 1660
HpyCH4III	ACNGT	2 cut(s)	745, 1132
HpyCH4IV	ACGT	3 cut(s)	273, 600, 625
HpyCH4V	TGCA	6 cut(s)	69, 308, 866, 1025, 1343, 1625
HpyF10VI	GCNNNNNNNGC	6 cut(s)	35, 363, 395, 1588, 1641, 1650
HpyF3I	CTNAG	5 cut(s)	32, 107, 684, 825, 833
HpySE526I	ACGT	3 cut(s)	273, 600, 625
Hsp92I	GRCGYC	4 cut(s)	141, 273, 441, 477
Hsp92II	CATG	2 cut(s)	236, 331
HspAI	GCGC	4 cut(s)	146, 347, 793, 1653
Kzo9I	GATC	6 cut(s)	103, 193, 229, 748, 1237, 1522
LmnI	GCTCC	5 cut(s)	121, 1129, 1372, 1587, 1641
Lsp1109I	GCAGC	9 cut(s)	262, 407, 688, 691, 1009, 1609, 1656, 1659, 1662
LweI	GCATC	6 cut(s)	295, 607, 769, 1465, 1574, 1604
MaeI	CTAG	2 cut(s)	918, 1116
MaeII	ACGT	3 cut(s)	273, 600, 625
MaeIII	GTNAC	5 cut(s)	559, 601, 689, 727, 1111
MalI	GATC	6 cut(s)	105, 195, 231, 750, 1239, 1524
MboI	GATC	6 cut(s)	103, 193, 229, 748, 1237, 1522
MfeI	CAATTG	1 cut(s)	867
MflI	RGATCY	3 cut(s)	103, 748, 1237
MhlI	GDGCHC	3 cut(s)	40, 126, 408
MlsI	TGGCCA	1 cut(s)	431
MluNI	TGGCCA	1 cut(s)	431
MlyI	GAGTC	6 cut(s)	6, 16, 68, 233, 1322, 1409
MmeI	TCCRAC	1 cut(s)	1151
Mox20I	TGGCCA	1 cut(s)	431
MroXI	GAANNNNTTC	1 cut(s)	323
MscI	TGGCCA	1 cut(s)	431
MseI	TTAA	3 cut(s)	570, 789, 1218
MslI	CAYNNNNRTG	2 cut(s)	777, 1348
Msp20I	TGGCCA	1 cut(s)	431
MspA1I	CMGCKG	2 cut(s)	964, 1505
MspI	CCGG	2 cut(s)	380, 1146
MspR9I	CCNGG	6 cut(s)	368, 380, 565, 588, 1348, 1462
MunI	CAATTG	1 cut(s)	867
Mva1269I	GAATGC	2 cut(s)	23, 1538
MvaI	CCWGG	5 cut(s)	368, 565, 588, 1348, 1462
MvnI	CGCG	3 cut(s)	146, 347, 389
MwoI	GCNNNNNNNGC	6 cut(s)	35, 363, 395, 1588, 1641, 1650
NciI	CCSGG	1 cut(s)	380
NdeII	GATC	6 cut(s)	103, 193, 229, 748, 1237, 1522
NlaIII	CATG	2 cut(s)	236, 331
NlaIV	GGNNCC	5 cut(s)	123, 681, 1374, 1444, 1481
NmeAIII	GCCGAG	1 cut(s)	898
NmuCI	GTSAC	3 cut(s)	601, 689, 727
NspV	TTCGAA	1 cut(s)	1664
OliI	CACNNNNGTG	1 cut(s)	1348
PaeR7I	CTCGAG	2 cut(s)	116, 197
PagI	TCATGA	2 cut(s)	232, 327
PasI	CCCWGGG	1 cut(s)	1461
PceI	AGGCCT	1 cut(s)	371
PcsI	WCGNNNNNNNCGW	4 cut(s)	96, 195, 225, 270
PctI	GAATGC	2 cut(s)	23, 1538
PdmI	GAANNNNTTC	1 cut(s)	323
PfeI	GAWTC	4 cut(s)	161, 324, 989, 1661
PflFI	GACNNNGTC	2 cut(s)	275, 1301
PflMI	CCANNNNNTGG	1 cut(s)	1369
PleI	GAGTC	6 cut(s)	6, 15, 68, 233, 1321, 1409
PpsI	GAGTC	6 cut(s)	6, 15, 68, 233, 1321, 1409
PpuMI	RGGWCCY	1 cut(s)	680
Psp124BI	GAGCTC	1 cut(s)	408
Psp5II	RGGWCCY	1 cut(s)	680
Psp6I	CCWGG	5 cut(s)	366, 563, 586, 1346, 1460
PspEI	GGTNACC	1 cut(s)	727
PspFI	CCCAGC	1 cut(s)	1501
PspGI	CCWGG	5 cut(s)	366, 563, 586, 1346, 1460
PspN4I	GGNNCC	5 cut(s)	123, 681, 1374, 1444, 1481
PspPI	GGNCC	4 cut(s)	166, 584, 680, 805
PspPPI	RGGWCCY	1 cut(s)	680
PspXI	VCTCGAGB	1 cut(s)	116
PsrI	GAACNNNNNNTAC	2 cut(s)	368, 400
PsuI	RGATCY	3 cut(s)	103, 748, 1237
PsyI	GACNNNGTC	2 cut(s)	275, 1301
PvuII	CAGCTG	1 cut(s)	964
RsaI	GTAC	4 cut(s)	245, 386, 473, 949
RsaNI	GTAC	4 cut(s)	244, 385, 472, 948
RseI	CAYNNNNRTG	2 cut(s)	777, 1348
SacI	GAGCTC	1 cut(s)	408
SalI	GTCGAC	1 cut(s)	9
SaqAI	TTAA	3 cut(s)	570, 789, 1218
Sau3AI	GATC	6 cut(s)	103, 193, 229, 748, 1237, 1522
Sau96I	GGNCC	4 cut(s)	166, 584, 680, 805
SchI	GAGTC	6 cut(s)	6, 16, 68, 233, 1322, 1409
ScrFI	CCNGG	6 cut(s)	368, 380, 565, 588, 1348, 1462
SduI	GDGCHC	3 cut(s)	40, 126, 408
SfaNI	GCATC	6 cut(s)	295, 607, 769, 1465, 1574, 1604
SfcI	CTRYAG	1 cut(s)	744
Sfr274I	CTCGAG	2 cut(s)	116, 197
SfuI	TTCGAA	1 cut(s)	1664
SinI	GGWCC	4 cut(s)	166, 584, 680, 805
SlaI	CTCGAG	2 cut(s)	116, 197
SmiMI	CAYNNNNRTG	2 cut(s)	777, 1348
SmlI	CTYRAG	5 cut(s)	116, 197, 407, 1331, 1553
SmoI	CTYRAG	5 cut(s)	116, 197, 407, 1331, 1553
SpeI	ACTAGT	1 cut(s)	1115
SseBI	AGGCCT	1 cut(s)	371
SsiI	CCGC	8 cut(s)	144, 149, 225, 290, 357, 389, 392, 1505
SspMI	CTAG	2 cut(s)	918, 1116
SstI	GAGCTC	1 cut(s)	408
StuI	AGGCCT	1 cut(s)	371
StyD4I	CCNGG	6 cut(s)	366, 378, 563, 586, 1346, 1460
StyI	CCWWGG	4 cut(s)	432, 546, 753, 1636
TaaI	ACNGT	2 cut(s)	745, 1132
TaiI	ACGT	3 cut(s)	276, 603, 628
TaqI	TCGA	8 cut(s)	10, 117, 189, 198, 216, 336, 480, 1664
TatI	WGTACW	1 cut(s)	947
TauI	GCSGC	6 cut(s)	146, 151, 228, 293, 392, 395
TfiI	GAWTC	4 cut(s)	161, 324, 989, 1661
Tru1I	TTAA	3 cut(s)	570, 789, 1218
Tru9I	TTAA	3 cut(s)	570, 789, 1218
TscAI	CASTG	4 cut(s)	40, 133, 315, 368
TseFI	GTSAC	3 cut(s)	601, 689, 727
TseI	GCWGC	9 cut(s)	250, 395, 701, 704, 1022, 1622, 1644, 1647, 1650
Tsp45I	GTSAC	3 cut(s)	601, 689, 727
TspDTI	ATGAA	2 cut(s)	316, 496
TspGWI	ACGGA	4 cut(s)	461, 1082, 1194, 1455
TspRI	CASTG	4 cut(s)	40, 133, 315, 368
Tth111I	GACNNNGTC	2 cut(s)	275, 1301
Van91I	CCANNNNNTGG	1 cut(s)	1369
VpaK11BI	GGWCC	4 cut(s)	166, 584, 680, 805
XagI	CCTNNNNNAGG	1 cut(s)	531
XapI	RAATTY	5 cut(s)	591, 851, 936, 1010, 1166
XhoI	CTCGAG	2 cut(s)	116, 197
XmiI	GTMKAC	3 cut(s)	10, 261, 1142
XmnI	GAANNNNTTC	1 cut(s)	323
XspI	CTAG	2 cut(s)	918, 1116
ZraI	GACGTC	1 cut(s)	274

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.