pycom11g13950

BTB POZ domain-containing protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
Physical Location & Seq
Forward (+)
13741947 .. 13746938
4992 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 3615 bp
ATGTTTGTTCACCACCCTACTTATCCCTTAAGGTCCGAGAGACTGGATAATGCCGGATTGTTTATATCGAAGGTTTTCACTAAAGTATTGCATGTCGTTTTGGCCTCGCCTAGTGATCATAAAGTGCAATTTAAATCGATCGCCCGAATTTTAGTGAACATACCAAGTTTTTGGTTTCTGCCAAAGGCTATGCAATCCTTGTACACAGTTATGTTGGTCTGCCTTAGGGCCCATTGCCACCTAAGCTATATGACATTACAGTTGGTTACTAGATACAAACTTGACGAATTTCGTATTTATGCATTTGGGTATGCATTCCATGTGCCAAGTTACGCCGCCGTAACATACCACCATGGGTCTTCAAAGAAGGATGTGTATCTTTTGTCCATTATGATTCTCCTTCACACTAGCTCTCTTAGAGCCTTTACATGCGATCTTTTTATCGCTCATTTGCGGGTTGTCACTTTAATGAGACAGTCTTCCTTTGCATGGACATTACCCACTATGTCTTATCTCGATCCCTATTTTAAAATGTTGCTCCAGACGCATTCCTTTGATCTAGTTAAAATGACGAGATCATATACCAACTGCAAACATGGTGTGCTGCTCCCGTTGAACGGTTTGGACGTCCTTGTTGGATGGTCCAGTACACCGACGAATAGCCAATCAATTTGTAAGAAGAAGACATGGCACAACAATGAATCTAAACTCGACCGCTGTCTCAAATCATTTCCATCTTATGAGATTAATCCAGATTTATCCCGAGATTTAAAGTTCTTGGTCCAGTATACTAGTTGGGATGAGCTAAATGGAATTGAAATGAGATTATCATCGATGATAACTGATTGGACAACTAAAGTTACAATCCAGGTCAAATTCCTTACCAAAATGTGTATTGGACCTCTCGTTCCTACACAGCCCAAGGTAACCCTGTTGTGTTACAAGTGGGAAAGGAAGCGTTATGAGATGAATGAAATAGTGCGATATAATACACCCCTTACTTGTTTTCTCCATGGGGATATAAATATAGAGATTTACATGCAAGTTCCCGAAGAATTATATAGACTGGTTCAAATAGTTCCAAAACCACGAAACACCCTCGTAACTCGTTTTGAGGTGTTCACTTATGGATTGAAAAATCCGACGGATGTGGTATACTCGTCTACGTTAAACTATGAAGTATTATTCCAAATTGCTAGAGTTACAGTTTATGTCGTTGACACGAATCTCACTAAGACTCCGAAAAAGCTTGAGAAAACTGATCTTGGGAAAACTCGTCTATGCTTTGACTTAAAGTTCAAGCATTGTTCAAACGGTATTTTGGTCTACCAGTCGAACTGCACCCCGAATGTGTTACTTTTGAGTATACCTTTGATCATCCATACGTTATATGCACATGAGACCCTGAAGAGTGTATTTAGACAGGACATCTCCTTTGCTGTTGATCTATTGGTAAAGATACGTACCCTGAAGGTATTATATAGGCAAACCCCAATGCATCTCAGCGGATCCAACCCCCTCGATCCTCGGAATGATGCTTGCCTTATTTGTTATGCTAACGTTGGTTACTTATCAAACCCGCACAAGGAAAAATCCCCAAATAGTTATGTCTTTACCGTTAGGGATATCCTTCGAATTGTTCCAAGACTCACCTCACTTCATTACGCCACAAGTGAGACATGGTTAGGAGTTCTTATTGAGAATTTCGAAGTACTTGCCATATTTTCATCCATTGTTGAGTCCCGACGACGATCGATGAAGATTATGCCGCATGTATCAACCCAACCAAGCCATGATACATCAACGAAGTCAACGACAAGACATATTGCATCTACATCTACATCAGCAAAGCATCAGGAGATTGAAGTCATGCAATCCGTTCCCAAGACAACTTGGCCAATCTCTTCACCAAGTCATTGCCCAAGTGTACATTTCAGAAGCTTGTCCAAGGAATCGGTATACAAGTTATGTCTAACTCAGGCGGAGTATCTTGAATCATACTCACATGATCTTAATGTTTTAATGAGGCACATATCTCAAGATGATCATACTCCGTTGAGTTCATTACCTTCGTCCAATTTGACGAGTGTTTTAGACATTATGCATATTTTTTTTACTTTTCTCCTTATTTTTACAAATGCATACTTCAAAGTAAATTTGAGATTCACGATCACCCGTTGTGCCGATAACTTCATCAACTATTCTACCTTATCTGTTGAAGAATATGATGCAATGGTTTGGAATCTGGGAAAGTATAATATATTTCTATTAGGATTAAATTACCTATTAAATGTTGTTATCCTAAAGGGAAAGCAAACACACCCACAATTACACATCTCTTTCTTCTACTTCTCTATTACCGTACCTTTCTCTCTCTATAGCCTCCATAATTGTTCAGTAAATTACCAATTATTTACCCCCTCAGGTTTAGGGTCAATTTCAATTTCTTACAACATCCTTAAAACATTTCAATTTCATACATTTACTTATAATTTAATTTCAATTTCATACATTTATAGGGTTCCTATTTATGCTGACGTAGCTACCACATTTATAAATAAAAAGAACCTAGAAATCTCCGACCCACTTCTCTCTCTCTCTTCCTTCTCCTACCTCGCAACCCCCCCCAGAAATCCATCCTTTCAACGCAACCCCTCATCCCATCCTACCCCACCCCCACCTCCCCCGCGACCCCTCCACCACCCCAAAACCCTAATGCCCAAGATGACGTCGTTCGCCACATCTGCCTGCGGGTCTTATCGACCCTGGAAGCCATGGATGCCCGTATTTCCATCCTCCAACTCATCTACACCCCGACCTCGCCGCCTCCATAACCACTGTGTTGACGGCGCTCGACCTCTTCCTGGTGGCTTTGGAGTCGTCCCTTGGACCCAAGATGATGAAGCTCGAATGCTTGACCTAATCCCTCACTTAAGTGAAGACGAATCCAAATATCTCATCACTAGGGTTTCTAGAACCCCCGATTCGAGCGAGGAGATGCTATCCGATCTCATCCTCGCATTAACTCACAACCCGAGCATGGCGTTCGTCAAGGTGTTCATCGCAAAGCTACCGCTGGAGTTTGGGTCCAGAGACTTGGTCGAGCGAGTTCTGGATTGGGTATTTCAAACCACCTTTAAGGTCGTCAAGGAGTCTATGGAGGAGTACACGAGTCTCAAAGTCCGTGGGAGAGGATGGTCAAGCTCCGAGTCACGGTGTCACGCCCCGATCCCAACATACGTCCAAGATCGACACGTGACGTCACCAAGTATCCGTATATCTAACATACCCCACCTCCAGAATATGTACCAAGCACGCTCAAGCCTCGAATTGAGTAATGATTTTTTGTATACTTTATGGTTGCATCTAACCTTCTCGTTAGACTGCCTACGTACCCACAATAGAGATCAACACATAAATCGCTATGTCTCAACAATATATCATAATGCATACCATGCAATATGTTCAAGAAACAATGACGAAGCACAATATTCTTCTCAATCCGCAATCCCGTCAATTAATCAATTCATGAATAAAAAATGCATGATCGATCTTAGCATTTATTTACTCCCTACTTGGATTATGAGTAATAAACATGGTAATTCTAATTTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1205

Amino Acids

138.63

Weight (kDa)

9.22

Isoelectric Point (pI)

46.34

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 2490, 2555, 3613
AatII GACGTC 3 cut(s) 630, 2732, 3263
AccI GTMKAC 7 cut(s) 788, 1155, 1163, 1326, 1366, 1959, 3350
AccII CGCG 1 cut(s) 2689
AclI AACGTT 1 cut(s) 1560
AclWI GGATC 5 cut(s) 512, 1503, 1516, 1517, 3223
AcoI YGGCCR 1 cut(s) 1895
AcsI RAATTY 5 cut(s) 147, 287, 875, 1702, 2155
AcuI CTGAAG 2 cut(s) 1427, 1490
AcvI CACGTG 1 cut(s) 3256
AcyI GRCGYC 3 cut(s) 627, 2729, 3260
AfaI GTAC 9 cut(s) 203, 649, 1465, 1713, 1929, 2364, 3167, 3308, 3394
AfiI CCNNNNNNNGG 6 cut(s) 489, 617, 1585, 2864, 3040, 3213
AflII CTTAAG 2 cut(s) 28, 2932
AflIII ACRYGT 1 cut(s) 3253
AhlI ACTAGT 1 cut(s) 791
AjnI CCWGG 3 cut(s) 867, 2765, 2863
AleI CACNNNNGTG 1 cut(s) 2934
AloI GAACNNNNNNTCC 2 cut(s) 891, 923
AluBI AGCT 9 cut(s) 246, 411, 805, 1249, 1941, 2543, 2906, 3070, 3204
AluI AGCT 9 cut(s) 246, 411, 805, 1249, 1941, 2543, 2906, 3070, 3204
Alw26I GTCTC 8 cut(s) 34, 466, 725, 1394, 1670, 3087, 3179, 3433
AlwI GGATC 5 cut(s) 512, 1503, 1516, 1517, 3223
Ama87I CYCGRG 2 cut(s) 762, 3034
AoxI GGCC 3 cut(s) 102, 228, 1895
ApaI GGGCCC 1 cut(s) 232
ApeKI GCWGC 1 cut(s) 604
ApoI RAATTY 5 cut(s) 147, 287, 875, 1702, 2155
ArsI GACNNNNNNTTYG 2 cut(s) 1418, 1450
AseI ATTAAT 2 cut(s) 747, 3519
Asp700I GAANNNNTTC 1 cut(s) 74
AspLEI GCGC 1 cut(s) 2852
AspS9I GGNCC 8 cut(s) 33, 228, 229, 642, 781, 899, 2889, 3087
AsuHPI GGTGA 4 cut(s) 1642, 1899, 2164, 3255
AsuII TTCGAA 2 cut(s) 1633, 1707
AvaI CYCGRG 2 cut(s) 762, 3034
AvaII GGWCC 6 cut(s) 33, 642, 781, 899, 2889, 3087
AxyI CCTNAGG 2 cut(s) 224, 2422
BaeGI GKGCMC 1 cut(s) 232
BalI TGGCCA 1 cut(s) 1897
BamHI GGATCC 1 cut(s) 1508
BanII GRGCYC 1 cut(s) 232
BauI CACGAG 1 cut(s) 3169
BbrPI CACGTG 1 cut(s) 3256
BbsI GAAGAC 4 cut(s) 351, 471, 689, 2946
BbvI GCAGC 1 cut(s) 591
BccI CCATC 6 cut(s) 633, 742, 2644, 2670, 2800, 3189
BceAI ACGGC 2 cut(s) 323, 2863
BcgI CGANNNNNNTGC 4 cut(s) 1697, 1731, 3028, 3062
BciT130I CCWGG 3 cut(s) 869, 2767, 2865
BciVI GTATCC 1 cut(s) 3281
BclI TGATCA 3 cut(s) 115, 1374, 2044
BcoDI GTCTC 8 cut(s) 34, 466, 725, 1394, 1670, 3087, 3179, 3433
BcuI ACTAGT 1 cut(s) 791
BfaI CTAG 9 cut(s) 111, 270, 408, 560, 792, 1197, 2570, 2964, 2973
BfmI CTRYAG 1 cut(s) 2377
BfoI RGCGCY 1 cut(s) 2853
BfrI CTTAAG 2 cut(s) 28, 2932
BfuI GTATCC 1 cut(s) 3281
BisI GCNGC 4 cut(s) 336, 605, 1769, 2824
BlsI GCNGC 4 cut(s) 337, 606, 1770, 2825
BmcAI AGTACT 1 cut(s) 1713
Bme1390I CCNGG 3 cut(s) 869, 2767, 2865
Bme18I GGWCC 6 cut(s) 33, 642, 781, 899, 2889, 3087
BmeT110I CYCGRG 2 cut(s) 762, 3034
BmgT120I GGNCC 8 cut(s) 33, 228, 229, 642, 781, 899, 2889, 3087
BmiI GGNNCC 5 cut(s) 230, 1510, 2523, 2891, 3088
BmrFI CCNGG 3 cut(s) 869, 2767, 2865
BmsI GCATC 8 cut(s) 1507, 1525, 1838, 1861, 2218, 2769, 2988, 3373
BoxI GACNNNNGTC 1 cut(s) 717
BpiI GAAGAC 4 cut(s) 351, 471, 689, 2946
BpmI CTGGAG 3 cut(s) 524, 3098, 3281
Bpu10I CCTNAGC 1 cut(s) 242
Bpu14I TTCGAA 2 cut(s) 1633, 1707
BpuEI CTTGAG 3 cut(s) 1271, 2022, 3304
Bsa29I ATCGAT 4 cut(s) 137, 833, 1754, 3549
BsaAI YACGTR 3 cut(s) 1463, 3256, 3392
BsaBI GATNNNNATC 2 cut(s) 375, 829
BsaHI GRCGYC 3 cut(s) 627, 2729, 3260
BsaI GGTCTC 1 cut(s) 1394
BsaJI CCNNGG 9 cut(s) 352, 921, 1012, 1526, 1947, 2765, 2774, 2885, 3184
BsaXI ACNNNNNCTCC 6 cut(s) 1222, 1252, 3071, 3101, 3279, 3309
Bsc4I CCNNNNNNNGG 6 cut(s) 489, 617, 1585, 2864, 3040, 3213
Bse1I ACTGG 5 cut(s) 48, 645, 784, 1071, 1330
Bse21I CCTNAGG 2 cut(s) 224, 2422
Bse3DI GCAATG 3 cut(s) 232, 1915, 2238
Bse8I GATNNNNATC 2 cut(s) 375, 829
BseBI CCWGG 3 cut(s) 869, 2767, 2865
BseCI ATCGAT 4 cut(s) 137, 833, 1754, 3549
BseDI CCNNGG 9 cut(s) 352, 921, 1012, 1526, 1947, 2765, 2774, 2885, 3184
BseJI GATNNNNATC 2 cut(s) 375, 829
BseLI CCNNNNNNNGG 6 cut(s) 489, 617, 1585, 2864, 3040, 3213
BseMI GCAATG 3 cut(s) 232, 1915, 2238
BseMII CTCAG 3 cut(s) 1516, 1991, 2436
BseNI ACTGG 5 cut(s) 48, 645, 784, 1071, 1330
BseRI GAGGAG 2 cut(s) 3008, 3176
BseSI GKGCMC 1 cut(s) 232
BseXI GCAGC 1 cut(s) 591
BsgI GTGCAG 1 cut(s) 1324
Bsh1236I CGCG 1 cut(s) 2689
Bsh1285I CGRYCG 3 cut(s) 141, 715, 1754
BshFI GGCC 3 cut(s) 104, 230, 1897
BshVI ATCGAT 4 cut(s) 137, 833, 1754, 3549
BsiEI CGRYCG 3 cut(s) 141, 715, 1754
BsiHKCI CYCGRG 2 cut(s) 762, 3034
BsiSI CCGG 1 cut(s) 54
BslFI GGGAC 2 cut(s) 1726, 2867
BslI CCNNNNNNNGG 6 cut(s) 489, 617, 1585, 2864, 3040, 3213
BsmAI GTCTC 8 cut(s) 34, 466, 725, 1394, 1670, 3087, 3179, 3433
BsmFI GGGAC 2 cut(s) 1726, 2867
BsmI GAATGC 3 cut(s) 314, 547, 2916
BsnI GGCC 3 cut(s) 104, 230, 1897
Bso31I GGTCTC 1 cut(s) 1394
BsoBI CYCGRG 2 cut(s) 762, 3034
Bsp119I TTCGAA 2 cut(s) 1633, 1707
Bsp120I GGGCCC 1 cut(s) 228
Bsp1286I GDGCHC 1 cut(s) 232
Bsp1407I TGTACA 2 cut(s) 201, 1927
Bsp19I CCATGG 3 cut(s) 352, 1012, 2774
BspANI GGCC 3 cut(s) 104, 230, 1897
BspCNI CTCAG 3 cut(s) 1515, 1990, 2435
BspDI ATCGAT 4 cut(s) 137, 833, 1754, 3549
BspFNI CGCG 1 cut(s) 2689
BspHI TCATGA 1 cut(s) 3528
BspLI GGNNCC 5 cut(s) 230, 1510, 2523, 2891, 3088
BspPI GGATC 5 cut(s) 512, 1503, 1516, 1517, 3223
BspT104I TTCGAA 2 cut(s) 1633, 1707
BspTI CTTAAG 2 cut(s) 28, 2932
BspTNI GGTCTC 1 cut(s) 1394
BsrDI GCAATG 3 cut(s) 232, 1915, 2238
BsrGI TGTACA 2 cut(s) 201, 1927
BsrI ACTGG 5 cut(s) 48, 645, 784, 1071, 1330
BssECI CCNNGG 9 cut(s) 352, 921, 1012, 1526, 1947, 2765, 2774, 2885, 3184
BssNAI GTATAC 5 cut(s) 789, 1156, 1367, 1960, 3351
BssNI GRCGYC 3 cut(s) 627, 2729, 3260
BssSI CACGAG 1 cut(s) 3169
BssT1I CCWWGG 6 cut(s) 352, 921, 1012, 1947, 2774, 2885
Bst1107I GTATAC 5 cut(s) 789, 1156, 1367, 1960, 3351
Bst2BI CACGAG 1 cut(s) 3169
Bst2UI CCWGG 3 cut(s) 869, 2767, 2865
Bst6I CTCTTC 4 cut(s) 1403, 1909, 2605, 2865
BstACI GRCGYC 3 cut(s) 627, 2729, 3260
BstAFI CTTAAG 2 cut(s) 28, 2932
BstAPI GCANNNNNTGC 1 cut(s) 3455
BstAUI TGTACA 2 cut(s) 201, 1927
BstBAI YACGTR 3 cut(s) 1463, 3256, 3392
BstBI TTCGAA 2 cut(s) 1633, 1707
BstC8I GCNNGC 3 cut(s) 1540, 2749, 3316
BstDEI CTNAG 8 cut(s) 224, 242, 416, 1233, 1502, 1977, 2422, 3554
BstDSI CCRYGG 4 cut(s) 352, 1012, 2774, 3184
BstEII GGTNACC 1 cut(s) 925
BstFNI CGCG 1 cut(s) 2689
BstH2I RGCGCY 1 cut(s) 2853
BstHHI GCGC 1 cut(s) 2852
BstMAI GTCTC 8 cut(s) 34, 466, 725, 1394, 1670, 3087, 3179, 3433
BstMCI CGRYCG 3 cut(s) 141, 715, 1754
BstMWI GCNNNNNNNGC 6 cut(s) 243, 544, 2540, 2744, 2779, 3455
BstNI CCWGG 3 cut(s) 869, 2767, 2865
BstNSI RCATGY 4 cut(s) 95, 432, 1042, 1775
BstPAI GACNNNNGTC 1 cut(s) 717
BstPI GGTNACC 1 cut(s) 925
BstSCI CCNGG 3 cut(s) 867, 2765, 2863
BstSFI CTRYAG 1 cut(s) 2377
BstSLI GKGCMC 1 cut(s) 232
BstSNI TACGTA 2 cut(s) 1463, 3392
BstUI CGCG 1 cut(s) 2689
BstV1I GCAGC 1 cut(s) 591
BstV2I GAAGAC 4 cut(s) 351, 471, 689, 2946
BstX2I RGATCY 1 cut(s) 1508
BstXI CCANNNNNNTGG 2 cut(s) 171, 3097
BstYI RGATCY 1 cut(s) 1508
BstZ17I GTATAC 5 cut(s) 789, 1156, 1367, 1960, 3351
Bsu15I ATCGAT 4 cut(s) 137, 833, 1754, 3549
Bsu36I CCTNAGG 2 cut(s) 224, 2422
BsuI GTATCC 1 cut(s) 3281
BsuRI GGCC 3 cut(s) 104, 230, 1897
BsuTUI ATCGAT 4 cut(s) 137, 833, 1754, 3549
BtgI CCRYGG 4 cut(s) 352, 1012, 2774, 3184
BtgZI GCGATG 1 cut(s) 3046
BtsIMutI CAGTG 1 cut(s) 2836
Cac8I GCNNGC 3 cut(s) 1540, 2749, 3316
CciI TCATGA 1 cut(s) 3528
CfoI GCGC 1 cut(s) 2852
Cfr13I GGNCC 8 cut(s) 33, 228, 229, 642, 781, 899, 2889, 3087
ClaI ATCGAT 4 cut(s) 137, 833, 1754, 3549
CseI GACGC 1 cut(s) 553
Csp6I GTAC 9 cut(s) 202, 648, 1464, 1712, 1928, 2363, 3166, 3307, 3393
CspCI CAANNNNNGTGG 2 cut(s) 3166, 3201
CviQI GTAC 9 cut(s) 202, 648, 1464, 1712, 1928, 2363, 3166, 3307, 3393
DdeI CTNAG 8 cut(s) 224, 242, 416, 1233, 1502, 1977, 2422, 3554
DraI TTTAAA 3 cut(s) 133, 529, 771
EaeI YGGCCR 1 cut(s) 1895
Eam1104I CTCTTC 4 cut(s) 1403, 1909, 2605, 2865
EarI CTCTTC 4 cut(s) 1403, 1909, 2605, 2865
EciI GGCGGA 1 cut(s) 1997
Eco105I TACGTA 2 cut(s) 1463, 3392
Eco130I CCWWGG 6 cut(s) 352, 921, 1012, 1947, 2774, 2885
Eco24I GRGCYC 1 cut(s) 232
Eco31I GGTCTC 1 cut(s) 1394
Eco32I GATATC 1 cut(s) 1627
Eco47I GGWCC 6 cut(s) 33, 642, 781, 899, 2889, 3087
Eco57I CTGAAG 2 cut(s) 1427, 1490
Eco72I CACGTG 1 cut(s) 3256
Eco81I CCTNAGG 2 cut(s) 224, 2422
Eco88I CYCGRG 2 cut(s) 762, 3034
Eco91I GGTNACC 1 cut(s) 925
EcoO109I RGGNCCY 1 cut(s) 228
EcoO65I GGTNACC 1 cut(s) 925
EcoRII CCWGG 3 cut(s) 867, 2765, 2863
EcoRV GATATC 1 cut(s) 1627
EcoT14I CCWWGG 6 cut(s) 352, 921, 1012, 1947, 2774, 2885
EcoT22I ATGCAT 7 cut(s) 304, 316, 1500, 2106, 2143, 3451, 3545
EcoT38I GRGCYC 1 cut(s) 232
ErhI CCWWGG 6 cut(s) 352, 921, 1012, 1947, 2774, 2885
FaqI GGGAC 2 cut(s) 1726, 2867
FauI CCCGC 4 cut(s) 447, 1587, 2694, 2744
FbaI TGATCA 3 cut(s) 115, 1374, 2044
FblI GTMKAC 7 cut(s) 788, 1155, 1163, 1326, 1366, 1959, 3350
Fnu4HI GCNGC 4 cut(s) 336, 605, 1769, 2824
FriOI GRGCYC 1 cut(s) 232
Fsp4HI GCNGC 4 cut(s) 336, 605, 1769, 2824
FspBI CTAG 9 cut(s) 111, 270, 408, 560, 792, 1197, 2570, 2964, 2973
GlaI GCGC 1 cut(s) 2851
GluI GCNGC 4 cut(s) 336, 605, 1769, 2824
GsuI CTGGAG 3 cut(s) 524, 3098, 3281
HaeII RGCGCY 1 cut(s) 2853
HaeIII GGCC 3 cut(s) 104, 230, 1897
HapII CCGG 1 cut(s) 54
HgaI GACGC 1 cut(s) 553
HhaI GCGC 1 cut(s) 2852
Hin1I GRCGYC 3 cut(s) 627, 2729, 3260
Hin6I GCGC 1 cut(s) 2850
HinP1I GCGC 1 cut(s) 2850
HincII GTYRAC 3 cut(s) 1219, 1812, 2845
HindII GTYRAC 3 cut(s) 1219, 1812, 2845
HindIII AAGCTT 2 cut(s) 1247, 1939
HpaII CCGG 1 cut(s) 54
HphI GGTGA 4 cut(s) 1642, 1899, 2164, 3255
Hpy188I TCNGA 8 cut(s) 37, 1143, 1242, 1530, 1937, 2581, 3007, 3208
Hpy99I CGWCG 5 cut(s) 658, 1147, 1749, 1752, 2734
HpyAV CCTTC 8 cut(s) 64, 361, 410, 1465, 1640, 2079, 2614, 3382
HpyF10VI GCNNNNNNNGC 6 cut(s) 243, 544, 2540, 2744, 2779, 3455
HpyF3I CTNAG 8 cut(s) 224, 242, 416, 1233, 1502, 1977, 2422, 3554
Hsp92I GRCGYC 3 cut(s) 627, 2729, 3260
HspAI GCGC 1 cut(s) 2850
Ksp22I TGATCA 3 cut(s) 115, 1374, 2044
LmnI GCTCC 3 cut(s) 543, 612, 3209
Lsp1109I GCAGC 1 cut(s) 591
LweI GCATC 8 cut(s) 1507, 1525, 1838, 1861, 2218, 2769, 2988, 3373
MaeI CTAG 9 cut(s) 111, 270, 408, 560, 792, 1197, 2570, 2964, 2973
MflI RGATCY 1 cut(s) 1508
MhlI GDGCHC 1 cut(s) 232
MlsI TGGCCA 1 cut(s) 1897
MluNI TGGCCA 1 cut(s) 1897
MlyI GAGTC 7 cut(s) 1231, 1641, 1748, 2886, 3161, 3181, 3218
MmeI TCCRAC 5 cut(s) 616, 1166, 1536, 2604, 2823
Mox20I TGGCCA 1 cut(s) 1897
Mph1103I ATGCAT 7 cut(s) 304, 316, 1500, 2106, 2143, 3451, 3545
MroXI GAANNNNTTC 1 cut(s) 74
MscI TGGCCA 1 cut(s) 1897
MslI CAYNNNNRTG 4 cut(s) 209, 467, 696, 2934
Msp20I TGGCCA 1 cut(s) 1897
MspA1I CMGCKG 3 cut(s) 717, 1506, 3076
MspCI CTTAAG 2 cut(s) 28, 2932
MspI CCGG 1 cut(s) 54
MspR9I CCNGG 3 cut(s) 869, 2767, 2865
Mva1269I GAATGC 3 cut(s) 314, 547, 2916
MvaI CCWGG 3 cut(s) 869, 2767, 2865
MvnI CGCG 1 cut(s) 2689
MwoI GCNNNNNNNGC 6 cut(s) 243, 544, 2540, 2744, 2779, 3455
NcoI CCATGG 3 cut(s) 352, 1012, 2774
NlaIV GGNNCC 5 cut(s) 230, 1510, 2523, 2891, 3088
NmuCI GTSAC 5 cut(s) 460, 3210, 3218, 3256, 3261
NsiI ATGCAT 7 cut(s) 304, 316, 1500, 2106, 2143, 3451, 3545
NspI RCATGY 4 cut(s) 95, 432, 1042, 1775
NspV TTCGAA 2 cut(s) 1633, 1707
OliI CACNNNNGTG 1 cut(s) 2934
PagI TCATGA 1 cut(s) 3528
PcsI WCGNNNNNNNCGW 2 cut(s) 624, 1811
PctI GAATGC 3 cut(s) 314, 547, 2916
PdmI GAANNNNTTC 1 cut(s) 74
PfeI GAWTC 9 cut(s) 394, 701, 1225, 1952, 1994, 2163, 2242, 2945, 2984
PflFI GACNNNGTC 1 cut(s) 3098
PkrI GCNGC 4 cut(s) 337, 606, 1770, 2825
Ple19I CGATCG 2 cut(s) 141, 1754
PleI GAGTC 7 cut(s) 1231, 1641, 1747, 2885, 3160, 3180, 3217
PmaCI CACGTG 1 cut(s) 3256
PmlI CACGTG 1 cut(s) 3256
PpsI GAGTC 7 cut(s) 1231, 1641, 1747, 2885, 3160, 3180, 3217
Ppu21I YACGTR 3 cut(s) 1463, 3256, 3392
PshAI GACNNNNGTC 1 cut(s) 717
PshBI ATTAAT 2 cut(s) 747, 3519
PsiI TTATAA 3 cut(s) 2490, 2555, 3613
Psp1406I AACGTT 1 cut(s) 1560
Psp6I CCWGG 3 cut(s) 867, 2765, 2863
PspCI CACGTG 1 cut(s) 3256
PspEI GGTNACC 1 cut(s) 925
PspGI CCWGG 3 cut(s) 867, 2765, 2863
PspN4I GGNNCC 5 cut(s) 230, 1510, 2523, 2891, 3088
PspOMI GGGCCC 1 cut(s) 228
PspPI GGNCC 8 cut(s) 33, 228, 229, 642, 781, 899, 2889, 3087
PsuI RGATCY 1 cut(s) 1508
PsyI GACNNNGTC 1 cut(s) 3098
PvuI CGATCG 2 cut(s) 141, 1754
RsaI GTAC 9 cut(s) 203, 649, 1465, 1713, 1929, 2364, 3167, 3308, 3394
RsaNI GTAC 9 cut(s) 202, 648, 1464, 1712, 1928, 2363, 3166, 3307, 3393
RseI CAYNNNNRTG 4 cut(s) 209, 467, 696, 2934
SatI GCNGC 4 cut(s) 336, 605, 1769, 2824
Sau96I GGNCC 8 cut(s) 33, 228, 229, 642, 781, 899, 2889, 3087
ScaI AGTACT 1 cut(s) 1713
SchI GAGTC 7 cut(s) 1231, 1641, 1748, 2886, 3161, 3181, 3218
ScrFI CCNGG 3 cut(s) 869, 2767, 2865
SduI GDGCHC 1 cut(s) 232
SfaNI GCATC 8 cut(s) 1507, 1525, 1838, 1861, 2218, 2769, 2988, 3373
SfcI CTRYAG 1 cut(s) 2377
SfuI TTCGAA 2 cut(s) 1633, 1707
SinI GGWCC 6 cut(s) 33, 642, 781, 899, 2889, 3087
SmiI ATTTAAAT 1 cut(s) 133
SmiMI CAYNNNNRTG 4 cut(s) 209, 467, 696, 2934
SmlI CTYRAG 5 cut(s) 28, 1250, 2037, 2932, 3319
SmoI CTYRAG 5 cut(s) 28, 1250, 2037, 2932, 3319
SnaBI TACGTA 2 cut(s) 1463, 3392
SpeI ACTAGT 1 cut(s) 791
SspI AATATT 1 cut(s) 3491
SspMI CTAG 9 cut(s) 111, 270, 408, 560, 792, 1197, 2570, 2964, 2973
StyD4I CCNGG 3 cut(s) 867, 2765, 2863
StyI CCWWGG 6 cut(s) 352, 921, 1012, 1947, 2774, 2885
SwaI ATTTAAAT 1 cut(s) 133
TatI WGTACW 5 cut(s) 201, 647, 1711, 1927, 3165
TauI GCSGC 3 cut(s) 338, 1771, 2826
TfiI GAWTC 9 cut(s) 394, 701, 1225, 1952, 1994, 2163, 2242, 2945, 2984
TscAI CASTG 1 cut(s) 2843
TseFI GTSAC 5 cut(s) 460, 3210, 3218, 3256, 3261
TseI GCWGC 1 cut(s) 604
Tsp45I GTSAC 5 cut(s) 460, 3210, 3218, 3256, 3261
TspGWI ACGGA 5 cut(s) 1160, 1867, 2043, 3173, 3263
TspRI CASTG 1 cut(s) 2843
Tth111I GACNNNGTC 1 cut(s) 3098
Vha464I CTTAAG 2 cut(s) 28, 2932
VpaK11BI GGWCC 6 cut(s) 33, 642, 781, 899, 2889, 3087
VspI ATTAAT 2 cut(s) 747, 3519
XapI RAATTY 5 cut(s) 147, 287, 875, 1702, 2155
XbaI TCTAGA 1 cut(s) 2972
XceI RCATGY 4 cut(s) 95, 432, 1042, 1775
XmiI GTMKAC 7 cut(s) 788, 1155, 1163, 1326, 1366, 1959, 3350
XmnI GAANNNNTTC 1 cut(s) 74
XspI CTAG 9 cut(s) 111, 270, 408, 560, 792, 1197, 2570, 2964, 2973
ZraI GACGTC 3 cut(s) 628, 2730, 3261
ZrmI AGTACT 1 cut(s) 1713
Zsp2I ATGCAT 7 cut(s) 304, 316, 1500, 2106, 2143, 3451, 3545
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.