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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g23561 |
| pyrus_communis | pycom11g18480 |
| rosa_laevigata | RLG00000034079 |
| rosa_roxburghii | Rroxscaffold_1G00038950 |
| rosa_rugosa | Rorug05G0193600 |
| rosa_samantha | Rh5AG279300 Rh5BG283700 Rh5BG284600 Rh5CG316500 Rh5DG293400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 118, 169 |
| AclWI | GGATC | 1 cut(s) | 422 |
| AcsI | RAATTY | 2 cut(s) | 74, 558 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 329, 366 |
| AflIII | ACRYGT | 1 cut(s) | 46 |
| AgsI | TTSAA | 3 cut(s) | 74, 82, 545 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 206, 238 |
| AluBI | AGCT | 5 cut(s) | 54, 85, 205, 391, 480 |
| AluI | AGCT | 5 cut(s) | 54, 85, 205, 391, 480 |
| Alw21I | GWGCWC | 1 cut(s) | 207 |
| AlwI | GGATC | 1 cut(s) | 422 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 391 |
| ApeKI | GCWGC | 3 cut(s) | 166, 172, 175 |
| ApoI | RAATTY | 2 cut(s) | 74, 558 |
| AsuC2I | CCSGG | 1 cut(s) | 525 |
| AsuHPI | GGTGA | 2 cut(s) | 513, 548 |
| BanII | GRGCYC | 2 cut(s) | 11, 207 |
| Bbv12I | GWGCWC | 1 cut(s) | 207 |
| BbvI | GCAGC | 3 cut(s) | 178, 184, 187 |
| BccI | CCATC | 1 cut(s) | 331 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 219, 253 |
| BcnI | CCSGG | 1 cut(s) | 525 |
| BisI | GCNGC | 4 cut(s) | 167, 170, 173, 176 |
| BlsI | GCNGC | 4 cut(s) | 168, 171, 174, 177 |
| Bme1390I | CCNGG | 1 cut(s) | 525 |
| BmiI | GGNNCC | 1 cut(s) | 8 |
| BmrFI | CCNGG | 1 cut(s) | 525 |
| BmsI | GCATC | 1 cut(s) | 239 |
| BpmI | CTGGAG | 1 cut(s) | 324 |
| BpuMI | CCSGG | 1 cut(s) | 525 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 329, 366 |
| Bse3DI | GCAATG | 1 cut(s) | 23 |
| BseGI | GGATG | 1 cut(s) | 319 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 329, 366 |
| BseMI | GCAATG | 1 cut(s) | 23 |
| BseXI | GCAGC | 3 cut(s) | 178, 184, 187 |
| BsiHKAI | GWGCWC | 1 cut(s) | 207 |
| BsiSI | CCGG | 1 cut(s) | 524 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 329, 366 |
| Bsp1286I | GDGCHC | 2 cut(s) | 11, 207 |
| Bsp143I | GATC | 1 cut(s) | 427 |
| BspACI | CCGC | 2 cut(s) | 118, 169 |
| BspCNI | CTCAG | 1 cut(s) | 4 |
| BspLI | GGNNCC | 1 cut(s) | 8 |
| BspPI | GGATC | 1 cut(s) | 422 |
| BsrDI | GCAATG | 1 cut(s) | 23 |
| BssMI | GATC | 1 cut(s) | 427 |
| Bst4CI | ACNGT | 3 cut(s) | 187, 281, 374 |
| Bst6I | CTCTTC | 2 cut(s) | 210, 489 |
| BstDEI | CTNAG | 3 cut(s) | 12, 153, 226 |
| BstF5I | GGATG | 1 cut(s) | 319 |
| BstKTI | GATC | 1 cut(s) | 430 |
| BstMBI | GATC | 1 cut(s) | 427 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 172, 175 |
| BstNSI | RCATGY | 2 cut(s) | 50, 118 |
| BstSCI | CCNGG | 1 cut(s) | 523 |
| BstV1I | GCAGC | 3 cut(s) | 178, 184, 187 |
| BtsCI | GGATG | 1 cut(s) | 319 |
| BtsIMutI | CAGTG | 2 cut(s) | 192, 286 |
| CaiI | CAGNNNCTG | 1 cut(s) | 391 |
| CviAII | CATG | 2 cut(s) | 47, 115 |
| CviJI | RGCY | 7 cut(s) | 9, 54, 85, 205, 391, 480, 500 |
| CviKI_1 | RGCY | 7 cut(s) | 9, 54, 85, 205, 391, 480, 500 |
| DdeI | CTNAG | 3 cut(s) | 12, 153, 226 |
| DpnI | GATC | 1 cut(s) | 429 |
| DpnII | GATC | 1 cut(s) | 427 |
| DraI | TTTAAA | 1 cut(s) | 484 |
| Eam1104I | CTCTTC | 2 cut(s) | 210, 489 |
| EarI | CTCTTC | 2 cut(s) | 210, 489 |
| Ecl136II | GAGCTC | 1 cut(s) | 205 |
| Eco24I | GRGCYC | 2 cut(s) | 11, 207 |
| Eco53kI | GAGCTC | 1 cut(s) | 205 |
| EcoICRI | GAGCTC | 1 cut(s) | 205 |
| EcoT38I | GRGCYC | 2 cut(s) | 11, 207 |
| FaeI | CATG | 2 cut(s) | 50, 118 |
| FaiI | YATR | 6 cut(s) | 48, 116, 297, 366, 426, 506 |
| FatI | CATG | 2 cut(s) | 46, 114 |
| FauI | CCCGC | 1 cut(s) | 111 |
| Fnu4HI | GCNGC | 4 cut(s) | 167, 170, 173, 176 |
| FokI | GGATG | 1 cut(s) | 306 |
| FriOI | GRGCYC | 2 cut(s) | 11, 207 |
| Fsp4HI | GCNGC | 4 cut(s) | 167, 170, 173, 176 |
| GluI | GCNGC | 4 cut(s) | 167, 170, 173, 176 |
| GsuI | CTGGAG | 1 cut(s) | 324 |
| HapII | CCGG | 1 cut(s) | 524 |
| Hin1II | CATG | 2 cut(s) | 50, 118 |
| HincII | GTYRAC | 1 cut(s) | 396 |
| HindII | GTYRAC | 1 cut(s) | 396 |
| HinfI | GANTC | 1 cut(s) | 341 |
| HpaII | CCGG | 1 cut(s) | 524 |
| HphI | GGTGA | 2 cut(s) | 513, 548 |
| Hpy166II | GTNNAC | 2 cut(s) | 396, 521 |
| Hpy188I | TCNGA | 2 cut(s) | 139, 346 |
| Hpy188III | TCNNGA | 2 cut(s) | 303, 545 |
| Hpy8I | GTNNAC | 2 cut(s) | 396, 521 |
| Hpy99I | CGWCG | 2 cut(s) | 241, 254 |
| HpyAV | CCTTC | 2 cut(s) | 278, 465 |
| HpyCH4III | ACNGT | 3 cut(s) | 187, 281, 374 |
| HpyCH4V | TGCA | 1 cut(s) | 385 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 172, 175 |
| HpyF3I | CTNAG | 3 cut(s) | 12, 153, 226 |
| Hsp92II | CATG | 2 cut(s) | 50, 118 |
| Kzo9I | GATC | 1 cut(s) | 427 |
| LmnI | GCTCC | 1 cut(s) | 6 |
| LpnPI | CCDG | 4 cut(s) | 24, 82, 288, 537 |
| Lsp1109I | GCAGC | 3 cut(s) | 178, 184, 187 |
| LweI | GCATC | 1 cut(s) | 239 |
| MaeIII | GTNAC | 2 cut(s) | 272, 352 |
| MalI | GATC | 1 cut(s) | 429 |
| MboI | GATC | 1 cut(s) | 427 |
| MboII | GAAGA | 7 cut(s) | 53, 121, 172, 208, 227, 423, 506 |
| MhlI | GDGCHC | 2 cut(s) | 11, 207 |
| MluCI | AATT | 4 cut(s) | 74, 125, 310, 558 |
| MnlI | CCTC | 6 cut(s) | 95, 299, 331, 367, 490, 541 |
| MseI | TTAA | 2 cut(s) | 192, 483 |
| MslI | CAYNNNNRTG | 2 cut(s) | 238, 534 |
| MspA1I | CMGCKG | 1 cut(s) | 169 |
| MspI | CCGG | 1 cut(s) | 524 |
| MspR9I | CCNGG | 1 cut(s) | 525 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 172, 175 |
| NciI | CCSGG | 1 cut(s) | 525 |
| NdeII | GATC | 1 cut(s) | 427 |
| NlaIII | CATG | 2 cut(s) | 50, 118 |
| NlaIV | GGNNCC | 1 cut(s) | 8 |
| NmuCI | GTSAC | 1 cut(s) | 352 |
| NspI | RCATGY | 2 cut(s) | 50, 118 |
| PciI | ACATGT | 1 cut(s) | 46 |
| PfeI | GAWTC | 1 cut(s) | 341 |
| PkrI | GCNGC | 4 cut(s) | 168, 171, 174, 177 |
| PscI | ACATGT | 1 cut(s) | 46 |
| Psp124BI | GAGCTC | 1 cut(s) | 207 |
| PspN4I | GGNNCC | 1 cut(s) | 8 |
| PstNI | CAGNNNCTG | 1 cut(s) | 391 |
| RseI | CAYNNNNRTG | 2 cut(s) | 238, 534 |
| SacI | GAGCTC | 1 cut(s) | 207 |
| SaqAI | TTAA | 2 cut(s) | 192, 483 |
| SatI | GCNGC | 4 cut(s) | 167, 170, 173, 176 |
| Sau3AI | GATC | 1 cut(s) | 427 |
| ScrFI | CCNGG | 1 cut(s) | 525 |
| SduI | GDGCHC | 2 cut(s) | 11, 207 |
| SfaNI | GCATC | 1 cut(s) | 239 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 238, 534 |
| Sse9I | AATT | 4 cut(s) | 74, 125, 310, 558 |
| SsiI | CCGC | 2 cut(s) | 118, 169 |
| SstI | GAGCTC | 1 cut(s) | 207 |
| StyD4I | CCNGG | 1 cut(s) | 523 |
| TaaI | ACNGT | 3 cut(s) | 187, 281, 374 |
| TasI | AATT | 4 cut(s) | 74, 125, 310, 558 |
| TauI | GCSGC | 1 cut(s) | 172 |
| TfiI | GAWTC | 1 cut(s) | 341 |
| Tru1I | TTAA | 2 cut(s) | 192, 483 |
| Tru9I | TTAA | 2 cut(s) | 192, 483 |
| TscAI | CASTG | 2 cut(s) | 192, 286 |
| TseFI | GTSAC | 1 cut(s) | 352 |
| TseI | GCWGC | 3 cut(s) | 166, 172, 175 |
| Tsp45I | GTSAC | 1 cut(s) | 352 |
| TspDTI | ATGAA | 3 cut(s) | 308, 417, 499 |
| TspRI | CASTG | 2 cut(s) | 192, 286 |
| XapI | RAATTY | 2 cut(s) | 74, 558 |
| XceI | RCATGY | 2 cut(s) | 50, 118 |