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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g23561 |
| pyrus_communis | pycom11g18480 |
| rosa_laevigata | RLG00000034079 |
| rosa_roxburghii | Rroxscaffold_1G00038950 |
| rosa_rugosa | Rorug05G0193600 |
| rosa_samantha | Rh5AG279300 Rh5BG283700 Rh5BG284600 Rh5CG316500 Rh5DG293400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 91 |
| AcsI | RAATTY | 1 cut(s) | 142 |
| AgsI | TTSAA | 2 cut(s) | 36, 182 |
| AjnI | CCWGG | 1 cut(s) | 101 |
| AluBI | AGCT | 4 cut(s) | 13, 89, 228, 264 |
| AluI | AGCT | 4 cut(s) | 13, 89, 228, 264 |
| Alw21I | GWGCWC | 2 cut(s) | 15, 230 |
| AlwI | GGATC | 1 cut(s) | 91 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 172 |
| ApoI | RAATTY | 1 cut(s) | 142 |
| AsuHPI | GGTGA | 3 cut(s) | 16, 187, 259 |
| BanII | GRGCYC | 2 cut(s) | 15, 230 |
| Bbv12I | GWGCWC | 2 cut(s) | 15, 230 |
| BccI | CCATC | 1 cut(s) | 121 |
| BciT130I | CCWGG | 1 cut(s) | 103 |
| BfaI | CTAG | 1 cut(s) | 20 |
| Bme1390I | CCNGG | 1 cut(s) | 103 |
| BmrFI | CCNGG | 1 cut(s) | 103 |
| BmsI | GCATC | 2 cut(s) | 84, 202 |
| BpmI | CTGGAG | 1 cut(s) | 102 |
| BpuEI | CTTGAG | 1 cut(s) | 214 |
| BsaJI | CCNNGG | 1 cut(s) | 102 |
| BseBI | CCWGG | 1 cut(s) | 103 |
| BseDI | CCNNGG | 1 cut(s) | 102 |
| BseMII | CTCAG | 1 cut(s) | 176 |
| BseRI | GAGGAG | 1 cut(s) | 38 |
| BsiHKAI | GWGCWC | 2 cut(s) | 15, 230 |
| Bsp1286I | GDGCHC | 2 cut(s) | 15, 230 |
| Bsp143I | GATC | 1 cut(s) | 83 |
| BspCNI | CTCAG | 1 cut(s) | 175 |
| BspPI | GGATC | 1 cut(s) | 91 |
| BssECI | CCNNGG | 1 cut(s) | 102 |
| BssMI | GATC | 1 cut(s) | 83 |
| Bst2UI | CCWGG | 1 cut(s) | 103 |
| Bst4CI | ACNGT | 2 cut(s) | 155, 194 |
| Bst6I | CTCTTC | 2 cut(s) | 230, 274 |
| BstDEI | CTNAG | 1 cut(s) | 162 |
| BstKTI | GATC | 1 cut(s) | 86 |
| BstMBI | GATC | 1 cut(s) | 83 |
| BstNI | CCWGG | 1 cut(s) | 103 |
| BstSCI | CCNGG | 1 cut(s) | 101 |
| CaiI | CAGNNNCTG | 1 cut(s) | 172 |
| CviAII | CATG | 1 cut(s) | 48 |
| CviJI | RGCY | 7 cut(s) | 13, 69, 89, 172, 228, 264, 285 |
| CviKI_1 | RGCY | 7 cut(s) | 13, 69, 89, 172, 228, 264, 285 |
| DdeI | CTNAG | 1 cut(s) | 162 |
| DpnI | GATC | 1 cut(s) | 85 |
| DpnII | GATC | 1 cut(s) | 83 |
| Eam1104I | CTCTTC | 2 cut(s) | 230, 274 |
| EarI | CTCTTC | 2 cut(s) | 230, 274 |
| Ecl136II | GAGCTC | 2 cut(s) | 13, 228 |
| Eco24I | GRGCYC | 2 cut(s) | 15, 230 |
| Eco53kI | GAGCTC | 2 cut(s) | 13, 228 |
| EcoICRI | GAGCTC | 2 cut(s) | 13, 228 |
| EcoRII | CCWGG | 1 cut(s) | 101 |
| EcoT38I | GRGCYC | 2 cut(s) | 15, 230 |
| FaeI | CATG | 1 cut(s) | 51 |
| FaiI | YATR | 2 cut(s) | 49, 137 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 199, 231 |
| FatI | CATG | 1 cut(s) | 47 |
| FriOI | GRGCYC | 2 cut(s) | 15, 230 |
| FspBI | CTAG | 1 cut(s) | 20 |
| GsuI | CTGGAG | 1 cut(s) | 102 |
| Hin1II | CATG | 1 cut(s) | 51 |
| HincII | GTYRAC | 1 cut(s) | 190 |
| HindII | GTYRAC | 1 cut(s) | 190 |
| HphI | GGTGA | 3 cut(s) | 16, 187, 259 |
| Hpy166II | GTNNAC | 1 cut(s) | 190 |
| Hpy188III | TCNNGA | 2 cut(s) | 20, 119 |
| Hpy8I | GTNNAC | 1 cut(s) | 190 |
| Hpy99I | CGWCG | 1 cut(s) | 46 |
| HpyAV | CCTTC | 2 cut(s) | 80, 238 |
| HpyCH4III | ACNGT | 2 cut(s) | 155, 194 |
| HpyCH4IV | ACGT | 1 cut(s) | 41 |
| HpyCH4V | TGCA | 1 cut(s) | 51 |
| HpyF3I | CTNAG | 1 cut(s) | 162 |
| HpySE526I | ACGT | 1 cut(s) | 41 |
| Hsp92II | CATG | 1 cut(s) | 51 |
| Kzo9I | GATC | 1 cut(s) | 83 |
| LmnI | GCTCC | 1 cut(s) | 10 |
| LpnPI | CCDG | 4 cut(s) | 88, 115, 132, 158 |
| LweI | GCATC | 2 cut(s) | 84, 202 |
| MaeI | CTAG | 1 cut(s) | 20 |
| MaeII | ACGT | 1 cut(s) | 41 |
| MalI | GATC | 1 cut(s) | 85 |
| MboI | GATC | 1 cut(s) | 83 |
| MboII | GAAGA | 5 cut(s) | 210, 213, 216, 247, 262 |
| MhlI | GDGCHC | 2 cut(s) | 15, 230 |
| MluCI | AATT | 1 cut(s) | 142 |
| MnlI | CCTC | 4 cut(s) | 16, 141, 162, 275 |
| MspA1I | CMGCKG | 1 cut(s) | 89 |
| MspR9I | CCNGG | 1 cut(s) | 103 |
| MvaI | CCWGG | 1 cut(s) | 103 |
| NdeII | GATC | 1 cut(s) | 83 |
| NlaIII | CATG | 1 cut(s) | 51 |
| Psp124BI | GAGCTC | 2 cut(s) | 15, 230 |
| Psp6I | CCWGG | 1 cut(s) | 101 |
| PspGI | CCWGG | 1 cut(s) | 101 |
| PstNI | CAGNNNCTG | 1 cut(s) | 172 |
| PvuII | CAGCTG | 1 cut(s) | 89 |
| SacI | GAGCTC | 2 cut(s) | 15, 230 |
| Sau3AI | GATC | 1 cut(s) | 83 |
| ScrFI | CCNGG | 1 cut(s) | 103 |
| SduI | GDGCHC | 2 cut(s) | 15, 230 |
| SetI | ASST | 7 cut(s) | 15, 44, 91, 104, 230, 249, 266 |
| SfaNI | GCATC | 2 cut(s) | 84, 202 |
| SgeI | CNNG | 9 cut(s) | 32, 60, 114, 115, 131, 159, 185, 231, 243 |
| SmlI | CTYRAG | 1 cut(s) | 229 |
| SmoI | CTYRAG | 1 cut(s) | 229 |
| Sse9I | AATT | 1 cut(s) | 142 |
| SspMI | CTAG | 1 cut(s) | 20 |
| SstI | GAGCTC | 2 cut(s) | 15, 230 |
| StyD4I | CCNGG | 1 cut(s) | 101 |
| TaaI | ACNGT | 2 cut(s) | 155, 194 |
| TaiI | ACGT | 1 cut(s) | 44 |
| TaqI | TCGA | 1 cut(s) | 146 |
| TasI | AATT | 1 cut(s) | 142 |
| XapI | RAATTY | 1 cut(s) | 142 |
| XbaI | TCTAGA | 1 cut(s) | 19 |
| XspI | CTAG | 1 cut(s) | 20 |