CUGBP Elav-like family member
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G03457 AT1G03457 AT1G03457 AT4G03110 AT4G03110 AT4G03110 |
| fragaria_vesca | FvH4_2g24620 FvH4_2g24620 FvH4_2g24620 |
| malus_domestica | MD03G1275000.v1.1 MD11G1297000.v1.1 |
| prunus_persica | Prupe.8G251600_v2.0.a1 Prupe.8G251600_v2.0.a1 Prupe.8G251600_v2.0.a1 Prupe.8G251600_v2.0.a1 |
| pyrus_communis | pycom03g21900 pycom11g26130 |
| rosa_chinensis | RchiOBHm_Chr6g0292451 |
| rosa_laevigata | RLG00000012023 |
| rosa_multiflora | Rmu_sc0001354.1_g000022 |
| rosa_roxburghii | Rroxscaffold_7G00175050 |
| rosa_rugosa | Rorug06G0226700 |
| rosa_samantha | Rh6AG340000 Rh6BG347300 Rh6CG354300 Rh6DG340100 |
| rosa_wichuraiana | Rw6G029600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 129 |
| AccII | CGCG | 2 cut(s) | 163, 165 |
| AciI | CCGC | 6 cut(s) | 5, 212, 221, 724, 811, 875 |
| AcoI | YGGCCR | 1 cut(s) | 64 |
| AcsI | RAATTY | 2 cut(s) | 829, 1067 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 202, 1237 |
| AflII | CTTAAG | 1 cut(s) | 1262 |
| AgsI | TTSAA | 6 cut(s) | 112, 359, 522, 1022, 1100, 1252 |
| AhlI | ACTAGT | 1 cut(s) | 995 |
| AjnI | CCWGG | 8 cut(s) | 597, 697, 730, 880, 907, 943, 988, 1006 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 331, 363, 607, 639 |
| Alw21I | GWGCWC | 1 cut(s) | 583 |
| Alw26I | GTCTC | 2 cut(s) | 452, 1263 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1196 |
| Ama87I | CYCGRG | 1 cut(s) | 254 |
| AoxI | GGCC | 2 cut(s) | 64, 156 |
| ApeKI | GCWGC | 2 cut(s) | 479, 602 |
| ApoI | RAATTY | 2 cut(s) | 829, 1067 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 56 |
| AspLEI | GCGC | 2 cut(s) | 165, 167 |
| AspS9I | GGNCC | 3 cut(s) | 397, 1025, 1255 |
| AsuC2I | CCSGG | 2 cut(s) | 255, 256 |
| AsuHPI | GGTGA | 3 cut(s) | 632, 933, 948 |
| AsuNHI | GCTAGC | 1 cut(s) | 568 |
| AvaI | CYCGRG | 1 cut(s) | 254 |
| AvaII | GGWCC | 3 cut(s) | 397, 1025, 1255 |
| BanII | GRGCYC | 2 cut(s) | 583, 863 |
| BbsI | GAAGAC | 1 cut(s) | 878 |
| Bbv12I | GWGCWC | 1 cut(s) | 583 |
| BbvI | GCAGC | 2 cut(s) | 466, 589 |
| BccI | CCATC | 3 cut(s) | 284, 500, 892 |
| BceAI | ACGGC | 1 cut(s) | 52 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1147, 1181 |
| BciT130I | CCWGG | 8 cut(s) | 599, 699, 732, 882, 909, 945, 990, 1008 |
| BciVI | GTATCC | 2 cut(s) | 915, 1220 |
| BcnI | CCSGG | 2 cut(s) | 255, 256 |
| BcoDI | GTCTC | 2 cut(s) | 452, 1263 |
| BcuI | ACTAGT | 1 cut(s) | 995 |
| BfaI | CTAG | 4 cut(s) | 264, 569, 825, 996 |
| BfmI | CTRYAG | 2 cut(s) | 737, 960 |
| BfrI | CTTAAG | 1 cut(s) | 1262 |
| BfuI | GTATCC | 2 cut(s) | 915, 1220 |
| BisI | GCNGC | 2 cut(s) | 480, 603 |
| BlpI | GCTNAGC | 1 cut(s) | 93 |
| BlsI | GCNGC | 2 cut(s) | 481, 604 |
| Bme18I | GGWCC | 3 cut(s) | 397, 1025, 1255 |
| BmeT110I | CYCGRG | 1 cut(s) | 254 |
| BmgT120I | GGNCC | 3 cut(s) | 397, 1025, 1255 |
| BmiI | GGNNCC | 3 cut(s) | 646, 696, 879 |
| BmsI | GCATC | 6 cut(s) | 217, 269, 756, 901, 992, 1161 |
| BmtI | GCTAGC | 1 cut(s) | 572 |
| BpiI | GAAGAC | 1 cut(s) | 878 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 14, 46 |
| BpmI | CTGGAG | 1 cut(s) | 930 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 93 |
| BpuEI | CTTGAG | 1 cut(s) | 1047 |
| BpuMI | CCSGG | 2 cut(s) | 255, 256 |
| BsaBI | GATNNNNATC | 1 cut(s) | 627 |
| BsaJI | CCNNGG | 9 cut(s) | 254, 255, 597, 654, 698, 781, 1006, 1007, 1125 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 202, 1237 |
| Bse118I | RCCGGY | 1 cut(s) | 1148 |
| Bse3DI | GCAATG | 1 cut(s) | 111 |
| Bse8I | GATNNNNATC | 1 cut(s) | 627 |
| BseBI | CCWGG | 8 cut(s) | 599, 699, 732, 882, 909, 945, 990, 1008 |
| BseDI | CCNNGG | 9 cut(s) | 254, 255, 597, 654, 698, 781, 1006, 1007, 1125 |
| BseGI | GGATG | 2 cut(s) | 628, 892 |
| BseJI | GATNNNNATC | 1 cut(s) | 627 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 202, 1237 |
| BseMI | GCAATG | 1 cut(s) | 111 |
| BseMII | CTCAG | 3 cut(s) | 107, 434, 596 |
| BsePI | GCGCGC | 1 cut(s) | 163 |
| BseRI | GAGGAG | 2 cut(s) | 89, 221 |
| BseXI | GCAGC | 2 cut(s) | 466, 589 |
| BseYI | CCCAGC | 1 cut(s) | 979 |
| Bsh1236I | CGCG | 2 cut(s) | 163, 165 |
| Bsh1285I | CGRYCG | 1 cut(s) | 225 |
| BshFI | GGCC | 2 cut(s) | 66, 158 |
| BsiEI | CGRYCG | 1 cut(s) | 225 |
| BsiHKAI | GWGCWC | 1 cut(s) | 583 |
| BsiHKCI | CYCGRG | 1 cut(s) | 254 |
| BsiSI | CCGG | 2 cut(s) | 255, 1149 |
| BslFI | GGGAC | 2 cut(s) | 400, 715 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 202, 1237 |
| BsmAI | GTCTC | 2 cut(s) | 452, 1263 |
| BsmFI | GGGAC | 2 cut(s) | 400, 715 |
| BsmI | GAATGC | 1 cut(s) | 443 |
| BsnI | GGCC | 2 cut(s) | 66, 158 |
| BsoBI | CYCGRG | 1 cut(s) | 254 |
| Bsp1286I | GDGCHC | 2 cut(s) | 583, 863 |
| Bsp143I | GATC | 2 cut(s) | 367, 1075 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 93 |
| Bsp19I | CCATGG | 1 cut(s) | 654 |
| BspACI | CCGC | 6 cut(s) | 5, 212, 221, 724, 811, 875 |
| BspANI | GGCC | 2 cut(s) | 66, 158 |
| BspCNI | CTCAG | 3 cut(s) | 106, 433, 595 |
| BspFNI | CGCG | 2 cut(s) | 163, 165 |
| BspLI | GGNNCC | 3 cut(s) | 646, 696, 879 |
| BspMAI | CTGCAG | 1 cut(s) | 741 |
| BspOI | GCTAGC | 1 cut(s) | 572 |
| BspTI | CTTAAG | 1 cut(s) | 1262 |
| BsrDI | GCAATG | 1 cut(s) | 111 |
| BsrFI | RCCGGY | 1 cut(s) | 1148 |
| BssAI | RCCGGY | 1 cut(s) | 1148 |
| BssECI | CCNNGG | 9 cut(s) | 254, 255, 597, 654, 698, 781, 1006, 1007, 1125 |
| BssHII | GCGCGC | 1 cut(s) | 163 |
| BssMI | GATC | 2 cut(s) | 367, 1075 |
| BssT1I | CCWWGG | 3 cut(s) | 654, 781, 1125 |
| Bst2UI | CCWGG | 8 cut(s) | 599, 699, 732, 882, 909, 945, 990, 1008 |
| Bst4CI | ACNGT | 3 cut(s) | 391, 686, 964 |
| BstAFI | CTTAAG | 1 cut(s) | 1262 |
| BstC8I | GCNNGC | 4 cut(s) | 165, 570, 579, 1086 |
| BstDEI | CTNAG | 3 cut(s) | 93, 420, 582 |
| BstDSI | CCRYGG | 1 cut(s) | 654 |
| BstF5I | GGATG | 2 cut(s) | 628, 892 |
| BstFNI | CGCG | 2 cut(s) | 163, 165 |
| BstHHI | GCGC | 2 cut(s) | 165, 167 |
| BstKTI | GATC | 2 cut(s) | 370, 1078 |
| BstMAI | GTCTC | 2 cut(s) | 452, 1263 |
| BstMBI | GATC | 2 cut(s) | 367, 1075 |
| BstMCI | CGRYCG | 1 cut(s) | 225 |
| BstNI | CCWGG | 8 cut(s) | 599, 699, 732, 882, 909, 945, 990, 1008 |
| BstSFI | CTRYAG | 2 cut(s) | 737, 960 |
| BstUI | CGCG | 2 cut(s) | 163, 165 |
| BstV1I | GCAGC | 2 cut(s) | 466, 589 |
| BstV2I | GAAGAC | 1 cut(s) | 878 |
| BsuI | GTATCC | 2 cut(s) | 915, 1220 |
| BsuRI | GGCC | 2 cut(s) | 66, 158 |
| BtgI | CCRYGG | 1 cut(s) | 654 |
| BtgZI | GCGATG | 1 cut(s) | 969 |
| BtsCI | GGATG | 2 cut(s) | 628, 892 |
| BtsIMutI | CAGTG | 1 cut(s) | 957 |
| Cac8I | GCNNGC | 4 cut(s) | 165, 570, 579, 1086 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1196 |
| CfoI | GCGC | 2 cut(s) | 165, 167 |
| Cfr10I | RCCGGY | 1 cut(s) | 1148 |
| Cfr13I | GGNCC | 3 cut(s) | 397, 1025, 1255 |
| Cfr9I | CCCGGG | 1 cut(s) | 254 |
| CsiI | ACCWGGT | 1 cut(s) | 943 |
| CviAII | CATG | 4 cut(s) | 82, 655, 715, 872 |
| DdeI | CTNAG | 3 cut(s) | 93, 420, 582 |
| DpnI | GATC | 2 cut(s) | 369, 1077 |
| DpnII | GATC | 2 cut(s) | 367, 1075 |
| EaeI | YGGCCR | 1 cut(s) | 64 |
| EciI | GGCGGA | 2 cut(s) | 20, 227 |
| Ecl136II | GAGCTC | 1 cut(s) | 581 |
| Eco130I | CCWWGG | 3 cut(s) | 654, 781, 1125 |
| Eco24I | GRGCYC | 2 cut(s) | 583, 863 |
| Eco47I | GGWCC | 3 cut(s) | 397, 1025, 1255 |
| Eco53kI | GAGCTC | 1 cut(s) | 581 |
| Eco88I | CYCGRG | 1 cut(s) | 254 |
| EcoICRI | GAGCTC | 1 cut(s) | 581 |
| EcoO109I | RGGNCCY | 1 cut(s) | 397 |
| EcoRII | CCWGG | 8 cut(s) | 597, 697, 730, 880, 907, 943, 988, 1006 |
| EcoT14I | CCWWGG | 3 cut(s) | 654, 781, 1125 |
| EcoT38I | GRGCYC | 2 cut(s) | 583, 863 |
| ErhI | CCWWGG | 3 cut(s) | 654, 781, 1125 |
| FaeI | CATG | 4 cut(s) | 85, 658, 718, 875 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 514, 546 |
| FaqI | GGGAC | 2 cut(s) | 400, 715 |
| FatI | CATG | 4 cut(s) | 81, 654, 714, 871 |
| FauI | CCCGC | 1 cut(s) | 818 |
| FblI | GTMKAC | 1 cut(s) | 129 |
| Fnu4HI | GCNGC | 2 cut(s) | 480, 603 |
| FokI | GGATG | 2 cut(s) | 615, 879 |
| FriOI | GRGCYC | 2 cut(s) | 583, 863 |
| Fsp4HI | GCNGC | 2 cut(s) | 480, 603 |
| FspBI | CTAG | 4 cut(s) | 264, 569, 825, 996 |
| GlaI | GCGC | 2 cut(s) | 164, 166 |
| GluI | GCNGC | 2 cut(s) | 480, 603 |
| GsaI | CCCAGC | 1 cut(s) | 983 |
| GsuI | CTGGAG | 1 cut(s) | 930 |
| HaeIII | GGCC | 2 cut(s) | 66, 158 |
| HapII | CCGG | 2 cut(s) | 255, 1149 |
| HhaI | GCGC | 2 cut(s) | 165, 167 |
| Hin1II | CATG | 4 cut(s) | 85, 658, 718, 875 |
| Hin6I | GCGC | 2 cut(s) | 163, 165 |
| HinP1I | GCGC | 2 cut(s) | 163, 165 |
| HincII | GTYRAC | 2 cut(s) | 130, 139 |
| HindII | GTYRAC | 2 cut(s) | 130, 139 |
| HinfI | GANTC | 6 cut(s) | 623, 711, 742, 801, 1193, 1202 |
| HpaII | CCGG | 2 cut(s) | 255, 1149 |
| HphI | GGTGA | 3 cut(s) | 632, 933, 948 |
| Hpy166II | GTNNAC | 4 cut(s) | 130, 139, 941, 970 |
| Hpy188I | TCNGA | 5 cut(s) | 352, 367, 585, 897, 1169 |
| Hpy188III | TCNNGA | 3 cut(s) | 171, 1064, 1079 |
| Hpy8I | GTNNAC | 4 cut(s) | 130, 139, 941, 970 |
| Hpy99I | CGWCG | 4 cut(s) | 65, 131, 134, 202 |
| HpyAV | CCTTC | 4 cut(s) | 13, 642, 1016, 1246 |
| HpyCH4III | ACNGT | 3 cut(s) | 391, 686, 964 |
| HpyCH4V | TGCA | 5 cut(s) | 274, 443, 500, 739, 796 |
| HpyF3I | CTNAG | 3 cut(s) | 93, 420, 582 |
| Hsp92II | CATG | 4 cut(s) | 85, 658, 718, 875 |
| HspAI | GCGC | 2 cut(s) | 163, 165 |
| Kzo9I | GATC | 2 cut(s) | 367, 1075 |
| LmnI | GCTCC | 3 cut(s) | 102, 644, 700 |
| Lsp1109I | GCAGC | 2 cut(s) | 466, 589 |
| LweI | GCATC | 6 cut(s) | 217, 269, 756, 901, 992, 1161 |
| MabI | ACCWGGT | 1 cut(s) | 943 |
| MaeI | CTAG | 4 cut(s) | 264, 569, 825, 996 |
| MaeIII | GTNAC | 3 cut(s) | 680, 954, 1178 |
| MalI | GATC | 2 cut(s) | 369, 1077 |
| MboI | GATC | 2 cut(s) | 367, 1075 |
| MboII | GAAGA | 2 cut(s) | 28, 878 |
| MhlI | GDGCHC | 2 cut(s) | 583, 863 |
| MluCI | AATT | 5 cut(s) | 829, 1039, 1067, 1232, 1247 |
| MlyI | GAGTC | 2 cut(s) | 705, 1202 |
| MmeI | TCCRAC | 1 cut(s) | 279 |
| MroXI | GAANNNNTTC | 1 cut(s) | 56 |
| MseI | TTAA | 4 cut(s) | 410, 449, 975, 1263 |
| MspA1I | CMGCKG | 1 cut(s) | 1031 |
| MspCI | CTTAAG | 1 cut(s) | 1262 |
| MspI | CCGG | 2 cut(s) | 255, 1149 |
| Mva1269I | GAATGC | 1 cut(s) | 443 |
| MvaI | CCWGG | 8 cut(s) | 599, 699, 732, 882, 909, 945, 990, 1008 |
| MvnI | CGCG | 2 cut(s) | 163, 165 |
| NciI | CCSGG | 2 cut(s) | 255, 256 |
| NcoI | CCATGG | 1 cut(s) | 654 |
| NdeII | GATC | 2 cut(s) | 367, 1075 |
| NheI | GCTAGC | 1 cut(s) | 568 |
| NlaIII | CATG | 4 cut(s) | 85, 658, 718, 875 |
| NlaIV | GGNNCC | 3 cut(s) | 646, 696, 879 |
| NmeAIII | GCCGAG | 1 cut(s) | 553 |
| NmuCI | GTSAC | 1 cut(s) | 954 |
| PasI | CCCWGGG | 1 cut(s) | 1007 |
| PauI | GCGCGC | 1 cut(s) | 163 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 126 |
| PctI | GAATGC | 1 cut(s) | 443 |
| PdmI | GAANNNNTTC | 1 cut(s) | 56 |
| PfeI | GAWTC | 4 cut(s) | 623, 742, 801, 1202 |
| PflFI | GACNNNGTC | 1 cut(s) | 134 |
| PfoI | TCCNGGA | 1 cut(s) | 907 |
| PkrI | GCNGC | 2 cut(s) | 481, 604 |
| PleI | GAGTC | 2 cut(s) | 705, 1201 |
| PpsI | GAGTC | 2 cut(s) | 705, 1201 |
| PpuMI | RGGWCCY | 1 cut(s) | 397 |
| Psp124BI | GAGCTC | 1 cut(s) | 583 |
| Psp5II | RGGWCCY | 1 cut(s) | 397 |
| Psp6I | CCWGG | 8 cut(s) | 597, 697, 730, 880, 907, 943, 988, 1006 |
| PspFI | CCCAGC | 1 cut(s) | 979 |
| PspGI | CCWGG | 8 cut(s) | 597, 697, 730, 880, 907, 943, 988, 1006 |
| PspN4I | GGNNCC | 3 cut(s) | 646, 696, 879 |
| PspPI | GGNCC | 3 cut(s) | 397, 1025, 1255 |
| PspPPI | RGGWCCY | 1 cut(s) | 397 |
| PstI | CTGCAG | 1 cut(s) | 741 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1196 |
| PsyI | GACNNNGTC | 1 cut(s) | 134 |
| PteI | GCGCGC | 1 cut(s) | 163 |
| PvuII | CAGCTG | 1 cut(s) | 1031 |
| SacI | GAGCTC | 1 cut(s) | 583 |
| SalI | GTCGAC | 1 cut(s) | 128 |
| SaqAI | TTAA | 4 cut(s) | 410, 449, 975, 1263 |
| SatI | GCNGC | 2 cut(s) | 480, 603 |
| Sau3AI | GATC | 2 cut(s) | 367, 1075 |
| Sau96I | GGNCC | 3 cut(s) | 397, 1025, 1255 |
| SchI | GAGTC | 2 cut(s) | 705, 1202 |
| SduI | GDGCHC | 2 cut(s) | 583, 863 |
| SexAI | ACCWGGT | 1 cut(s) | 943 |
| SfaNI | GCATC | 6 cut(s) | 217, 269, 756, 901, 992, 1161 |
| SfcI | CTRYAG | 2 cut(s) | 737, 960 |
| SgrDI | CGTCGACG | 1 cut(s) | 128 |
| SinI | GGWCC | 3 cut(s) | 397, 1025, 1255 |
| SmaI | CCCGGG | 1 cut(s) | 256 |
| SmlI | CTYRAG | 2 cut(s) | 1062, 1262 |
| SmoI | CTYRAG | 2 cut(s) | 1062, 1262 |
| SpeI | ACTAGT | 1 cut(s) | 995 |
| Sse9I | AATT | 5 cut(s) | 829, 1039, 1067, 1232, 1247 |
| SsiI | CCGC | 6 cut(s) | 5, 212, 221, 724, 811, 875 |
| SspI | AATATT | 2 cut(s) | 408, 817 |
| SspMI | CTAG | 4 cut(s) | 264, 569, 825, 996 |
| SstI | GAGCTC | 1 cut(s) | 583 |
| StyI | CCWWGG | 3 cut(s) | 654, 781, 1125 |
| TaaI | ACNGT | 3 cut(s) | 391, 686, 964 |
| TaqI | TCGA | 4 cut(s) | 129, 200, 225, 486 |
| TasI | AATT | 5 cut(s) | 829, 1039, 1067, 1232, 1247 |
| TfiI | GAWTC | 4 cut(s) | 623, 742, 801, 1202 |
| Tru1I | TTAA | 4 cut(s) | 410, 449, 975, 1263 |
| Tru9I | TTAA | 4 cut(s) | 410, 449, 975, 1263 |
| TscAI | CASTG | 1 cut(s) | 957 |
| TseFI | GTSAC | 1 cut(s) | 954 |
| TseI | GCWGC | 2 cut(s) | 479, 602 |
| Tsp45I | GTSAC | 1 cut(s) | 954 |
| TspDTI | ATGAA | 2 cut(s) | 624, 1235 |
| TspGWI | ACGGA | 1 cut(s) | 101 |
| TspMI | CCCGGG | 1 cut(s) | 254 |
| TspRI | CASTG | 1 cut(s) | 957 |
| Tth111I | GACNNNGTC | 1 cut(s) | 134 |
| Vha464I | CTTAAG | 1 cut(s) | 1262 |
| VpaK11BI | GGWCC | 3 cut(s) | 397, 1025, 1255 |
| XapI | RAATTY | 2 cut(s) | 829, 1067 |
| XmaI | CCCGGG | 1 cut(s) | 254 |
| XmiI | GTMKAC | 1 cut(s) | 129 |
| XmnI | GAANNNNTTC | 1 cut(s) | 56 |
| XspI | CTAG | 4 cut(s) | 264, 569, 825, 996 |