pycom12g08950

Amidohydrolase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
Physical Location & Seq
Forward (+)
10666095 .. 10666672
578 bp
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UTR
Exon/CDS
Intron
pycom12g08950.3

Sequence Viewer

Length: 249 bp
ATGCTTTGGGATCGTGCGAAGTGGCACCACTCTAGAACAGATACCAATGTCTACGAGGGATGGAAAGGGAAGGACATTCGACTTCGTCTGGATCAAAACACGATCAAACGAACGAATGTTGGAGTGATTCAAATTGGAGGACGTTCATGTGTCCCTTGGCGTGTTCGTGTCAAAATTTCGGCTTTTTTCTACCAAACGGTTATTTTCTGGCGACGGAATAAAAAAGTAGTGCGCGGTGTTGGAAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

83

Amino Acids

9.81

Weight (kDa)

11.44

Isoelectric Point (pI)

34.14

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0020355)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 24
AccI GTMKAC 1 cut(s) 51
AccII CGCG 1 cut(s) 234
AciI CCGC 1 cut(s) 234
AclWI GGATC 2 cut(s) 18, 99
AcsI RAATTY 1 cut(s) 174
AgsI TTSAA 1 cut(s) 131
AlwI GGATC 2 cut(s) 18, 99
ApoI RAATTY 1 cut(s) 174
AspLEI GCGC 1 cut(s) 234
BaeI ACNNNNGTAYC 2 cut(s) 33, 66
BanI GGYRCC 1 cut(s) 24
BccI CCATC 1 cut(s) 54
BfaI CTAG 1 cut(s) 33
BmiI GGNNCC 1 cut(s) 26
BsaJI CCNNGG 1 cut(s) 155
BseDI CCNNGG 1 cut(s) 155
BseGI GGATG 1 cut(s) 65
Bsh1236I CGCG 1 cut(s) 234
BshNI GGYRCC 1 cut(s) 24
BslFI GGGAC 1 cut(s) 137
BsmFI GGGAC 1 cut(s) 137
Bsp143I GATC 3 cut(s) 10, 91, 102
BspACI CCGC 1 cut(s) 234
BspFNI CGCG 1 cut(s) 234
BspLI GGNNCC 1 cut(s) 26
BspPI GGATC 2 cut(s) 18, 99
BspT107I GGYRCC 1 cut(s) 24
BssECI CCNNGG 1 cut(s) 155
BssMI GATC 3 cut(s) 10, 91, 102
BssT1I CCWWGG 1 cut(s) 155
Bst4CI ACNGT 1 cut(s) 199
BstF5I GGATG 1 cut(s) 65
BstFNI CGCG 1 cut(s) 234
BstHHI GCGC 1 cut(s) 234
BstKTI GATC 3 cut(s) 13, 94, 105
BstMBI GATC 3 cut(s) 10, 91, 102
BstUI CGCG 1 cut(s) 234
BtsCI GGATG 1 cut(s) 65
CfoI GCGC 1 cut(s) 234
CviAII CATG 1 cut(s) 147
CviJI RGCY 1 cut(s) 182
CviKI_1 RGCY 1 cut(s) 182
DpnI GATC 3 cut(s) 12, 93, 104
DpnII GATC 3 cut(s) 10, 91, 102
Eco130I CCWWGG 1 cut(s) 155
EcoT14I CCWWGG 1 cut(s) 155
ErhI CCWWGG 1 cut(s) 155
FaeI CATG 1 cut(s) 150
FaiI YATR 1 cut(s) 148
FaqI GGGAC 1 cut(s) 137
FatI CATG 1 cut(s) 146
FblI GTMKAC 1 cut(s) 51
FokI GGATG 1 cut(s) 72
FspBI CTAG 1 cut(s) 33
GlaI GCGC 1 cut(s) 233
HhaI GCGC 1 cut(s) 234
Hin1II CATG 1 cut(s) 150
Hin6I GCGC 1 cut(s) 232
HinP1I GCGC 1 cut(s) 232
HinfI GANTC 1 cut(s) 127
Hpy166II GTNNAC 1 cut(s) 52
Hpy188III TCNNGA 2 cut(s) 33, 89
Hpy8I GTNNAC 1 cut(s) 52
Hpy99I CGWCG 1 cut(s) 216
HpyAV CCTTC 1 cut(s) 64
HpyCH4III ACNGT 1 cut(s) 199
HpyCH4IV ACGT 1 cut(s) 142
HpySE526I ACGT 1 cut(s) 142
Hsp92II CATG 1 cut(s) 150
HspAI GCGC 1 cut(s) 232
Kzo9I GATC 3 cut(s) 10, 91, 102
LpnPI CCDG 2 cut(s) 74, 193
MaeI CTAG 1 cut(s) 33
MaeII ACGT 1 cut(s) 142
MalI GATC 3 cut(s) 12, 93, 104
MboI GATC 3 cut(s) 10, 91, 102
MluCI AATT 2 cut(s) 132, 174
MmeI TCCRAC 2 cut(s) 100, 220
MnlI CCTC 2 cut(s) 49, 131
MvnI CGCG 1 cut(s) 234
NdeII GATC 3 cut(s) 10, 91, 102
NlaIII CATG 1 cut(s) 150
NlaIV GGNNCC 1 cut(s) 26
PfeI GAWTC 1 cut(s) 127
PflFI GACNNNGTC 1 cut(s) 84
PspN4I GGNNCC 1 cut(s) 26
PsyI GACNNNGTC 1 cut(s) 84
Sau3AI GATC 3 cut(s) 10, 91, 102
SetI ASST 1 cut(s) 145
Sse9I AATT 2 cut(s) 132, 174
SsiI CCGC 1 cut(s) 234
SspMI CTAG 1 cut(s) 33
StyI CCWWGG 1 cut(s) 155
TaaI ACNGT 1 cut(s) 199
TaiI ACGT 1 cut(s) 145
TaqI TCGA 1 cut(s) 79
TasI AATT 2 cut(s) 132, 174
TfiI GAWTC 1 cut(s) 127
TspDTI ATGAA 1 cut(s) 135
TspGWI ACGGA 1 cut(s) 229
Tth111I GACNNNGTC 1 cut(s) 84
XapI RAATTY 1 cut(s) 174
XbaI TCTAGA 1 cut(s) 32
XmiI GTMKAC 1 cut(s) 51
XspI CTAG 1 cut(s) 33
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.