pycom12g09380

Serine hydrolase (FSH1)

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
Physical Location & Seq
Forward (+)
11346043 .. 11347622
1580 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom12g09380.2

Sequence Viewer

Length: 789 bp
ATGGAAAGCCAGAAGAAGATGAAGATACTTTGCCTCCATGGATTTAGAACGAGCGGCACCTTTCTCAAAAACCAAATTACCACCAAATGGCCTTCTTTCGCCTCTCAATTTGACATGGATTTTCCCGATGGTATATTTCCTGCTGCTGGAAAATCTGACATTGAAGGCGTCTACCCACCACCTTATTACGAGTGGTTTCAATTTGACAAGGACTTCACAGAGTACACAAACTTGGAAGAATGCATCACTTATTTATGCGACTACATAACAACCAAGGGCCCTTTTGATGGTCTGCTTGGTTTTTCTCAGGGTGCGACGCTATCAGGACTCCTATTGGGCTACCAAGCTCAGGGTAAGGTGTTGAAGGACCATCCACCTTTCAAGTTTTGTATATCAACATCAGGAGCAATGTTCAGAGATCCCAGCATATGTGACATTGCCTACAAAGACCCTATCAAGGCCAAATCTGTTCACTTCATAGGAGCTAAAGACTGGTTAAGACGACCTTCGGAGGATTTTGCCGCTGCATTTGATAACCCACTCATCATAAGGCACCCATACGGCCATACTGTCCCAAGGCTAGATGAAGCAGCAACCGAGCAACTATGTGGTTGGACTAAAACAATCATTGAATGCAATAATACTGAGAATGGAGATGCCAAAGAAAAACATAACGGCACAGATCCAGTGATTGCAGAAAGTAAGATCCAAAACAAGAAAACAAGCACTGCAGTTGACATAAAAACAAACGAGAGACAAGTCGAGGTTGTGGAGGCAACCTACGCATGA

Protein Analysis

263

Amino Acids

29.45

Weight (kDa)

5.57

Isoelectric Point (pI)

35.85

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0015528)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 56, 552
AccB7I CCANNNNNTGG 1 cut(s) 87
AccBSI CCGCTC 1 cut(s) 54
AccI GTMKAC 1 cut(s) 171
AciI CCGC 2 cut(s) 54, 522
AclWI GGATC 3 cut(s) 413, 677, 700
AcoI YGGCCR 1 cut(s) 562
AcyI GRCGYC 1 cut(s) 168
AfaI GTAC 1 cut(s) 224
AfiI CCNNNNNNNGG 5 cut(s) 87, 146, 287, 349, 457
AgsI TTSAA 5 cut(s) 164, 200, 364, 382, 632
AluBI AGCT 2 cut(s) 347, 485
AluI AGCT 2 cut(s) 347, 485
Alw26I GTCTC 1 cut(s) 748
AlwI GGATC 3 cut(s) 413, 677, 700
AoxI GGCC 4 cut(s) 89, 277, 459, 562
ApaI GGGCCC 1 cut(s) 281
ApeKI GCWGC 3 cut(s) 143, 524, 590
AspS9I GGNCC 3 cut(s) 277, 278, 367
AvaII GGWCC 1 cut(s) 367
BaeGI GKGCMC 1 cut(s) 281
BanI GGYRCC 2 cut(s) 56, 552
BanII GRGCYC 1 cut(s) 281
BbvI GCAGC 3 cut(s) 130, 511, 602
BccI CCATC 3 cut(s) 122, 281, 378
BceAI ACGGC 2 cut(s) 577, 691
BcoDI GTCTC 1 cut(s) 748
BfaI CTAG 1 cut(s) 581
BfmI CTRYAG 1 cut(s) 729
BisI GCNGC 5 cut(s) 55, 144, 522, 525, 591
BlsI GCNGC 5 cut(s) 56, 145, 523, 526, 592
Bme18I GGWCC 1 cut(s) 367
BmgT120I GGNCC 3 cut(s) 277, 278, 367
BmiI GGNNCC 3 cut(s) 58, 279, 554
BmsI GCATC 2 cut(s) 252, 646
Bpu10I CCTNAGC 1 cut(s) 348
BsaHI GRCGYC 1 cut(s) 168
BsaJI CCNNGG 3 cut(s) 37, 273, 575
BsaXI ACNNNNNCTCC 2 cut(s) 18, 48
Bsc4I CCNNNNNNNGG 5 cut(s) 87, 146, 287, 349, 457
Bse1I ACTGG 2 cut(s) 497, 686
Bse3DI GCAATG 2 cut(s) 414, 435
BseDI CCNNGG 3 cut(s) 37, 273, 575
BseGI GGATG 1 cut(s) 370
BseLI CCNNNNNNNGG 5 cut(s) 87, 146, 287, 349, 457
BseMI GCAATG 2 cut(s) 414, 435
BseMII CTCAG 3 cut(s) 320, 362, 636
BseNI ACTGG 2 cut(s) 497, 686
BseSI GKGCMC 1 cut(s) 281
BseXI GCAGC 3 cut(s) 130, 511, 602
BseYI CCCAGC 1 cut(s) 422
BshFI GGCC 4 cut(s) 91, 279, 461, 564
BshNI GGYRCC 2 cut(s) 56, 552
BslFI GGGAC 1 cut(s) 557
BslI CCNNNNNNNGG 5 cut(s) 87, 146, 287, 349, 457
BsmAI GTCTC 1 cut(s) 748
BsmFI GGGAC 1 cut(s) 557
BsmI GAATGC 2 cut(s) 245, 638
BsnI GGCC 4 cut(s) 91, 279, 461, 564
Bsp120I GGGCCC 1 cut(s) 277
Bsp1286I GDGCHC 1 cut(s) 281
Bsp143I GATC 3 cut(s) 418, 682, 705
Bsp19I CCATGG 1 cut(s) 37
BspACI CCGC 2 cut(s) 54, 522
BspANI GGCC 4 cut(s) 91, 279, 461, 564
BspCNI CTCAG 3 cut(s) 319, 361, 637
BspLI GGNNCC 3 cut(s) 58, 279, 554
BspMAI CTGCAG 1 cut(s) 733
BspPI GGATC 3 cut(s) 413, 677, 700
BspT107I GGYRCC 2 cut(s) 56, 552
BsrBI CCGCTC 1 cut(s) 54
BsrDI GCAATG 2 cut(s) 414, 435
BsrI ACTGG 2 cut(s) 497, 686
BssECI CCNNGG 3 cut(s) 37, 273, 575
BssMI GATC 3 cut(s) 418, 682, 705
BssNI GRCGYC 1 cut(s) 168
BssT1I CCWWGG 3 cut(s) 37, 273, 575
Bst4CI ACNGT 1 cut(s) 571
BstACI GRCGYC 1 cut(s) 168
BstDEI CTNAG 3 cut(s) 306, 348, 645
BstDSI CCRYGG 1 cut(s) 37
BstF5I GGATG 1 cut(s) 370
BstKTI GATC 3 cut(s) 421, 685, 708
BstMAI GTCTC 1 cut(s) 748
BstMBI GATC 3 cut(s) 418, 682, 705
BstMWI GCNNNNNNNGC 1 cut(s) 782
BstSFI CTRYAG 1 cut(s) 729
BstSLI GKGCMC 1 cut(s) 281
BstV1I GCAGC 3 cut(s) 130, 511, 602
BstX2I RGATCY 3 cut(s) 418, 682, 705
BstYI RGATCY 3 cut(s) 418, 682, 705
BsuRI GGCC 4 cut(s) 91, 279, 461, 564
BtgI CCRYGG 1 cut(s) 37
BtsCI GGATG 1 cut(s) 370
BtsI GCAGTG 1 cut(s) 726
BtsIMutI CAGTG 2 cut(s) 693, 726
Cfr13I GGNCC 3 cut(s) 277, 278, 367
CseI GACGC 2 cut(s) 157, 325
Csp6I GTAC 1 cut(s) 223
CviAII CATG 3 cut(s) 38, 115, 786
CviJI RGCY 9 cut(s) 9, 91, 279, 339, 347, 461, 485, 564, 580
CviKI_1 RGCY 9 cut(s) 9, 91, 279, 339, 347, 461, 485, 564, 580
CviQI GTAC 1 cut(s) 223
DdeI CTNAG 3 cut(s) 306, 348, 645
DpnI GATC 3 cut(s) 420, 684, 707
DpnII GATC 3 cut(s) 418, 682, 705
EaeI YGGCCR 1 cut(s) 562
Eco130I CCWWGG 3 cut(s) 37, 273, 575
Eco24I GRGCYC 1 cut(s) 281
Eco47I GGWCC 1 cut(s) 367
EcoO109I RGGNCCY 2 cut(s) 277, 278
EcoT14I CCWWGG 3 cut(s) 37, 273, 575
EcoT22I ATGCAT 1 cut(s) 245
EcoT38I GRGCYC 1 cut(s) 281
ErhI CCWWGG 3 cut(s) 37, 273, 575
FaeI CATG 3 cut(s) 41, 118, 789
FalI AAGNNNNNCTT 2 cut(s) 490, 522
FaqI GGGAC 1 cut(s) 557
FatI CATG 3 cut(s) 37, 114, 785
FauNDI CATATG 1 cut(s) 428
FblI GTMKAC 1 cut(s) 171
Fnu4HI GCNGC 5 cut(s) 55, 144, 522, 525, 591
FokI GGATG 1 cut(s) 357
FriOI GRGCYC 1 cut(s) 281
Fsp4HI GCNGC 5 cut(s) 55, 144, 522, 525, 591
FspBI CTAG 1 cut(s) 581
GluI GCNGC 5 cut(s) 55, 144, 522, 525, 591
GsaI CCCAGC 1 cut(s) 426
HaeIII GGCC 4 cut(s) 91, 279, 461, 564
HgaI GACGC 2 cut(s) 157, 325
Hin1I GRCGYC 1 cut(s) 168
Hin1II CATG 3 cut(s) 41, 118, 789
HincII GTYRAC 1 cut(s) 736
HindII GTYRAC 1 cut(s) 736
HinfI GANTC 1 cut(s) 327
Hpy166II GTNNAC 4 cut(s) 172, 225, 472, 736
Hpy188I TCNGA 3 cut(s) 157, 416, 511
Hpy188III TCNNGA 3 cut(s) 125, 324, 402
Hpy8I GTNNAC 4 cut(s) 172, 225, 472, 736
Hpy99I CGWCG 1 cut(s) 319
HpyAV CCTTC 4 cut(s) 102, 158, 358, 516
HpyCH4III ACNGT 1 cut(s) 571
HpyCH4V TGCA 5 cut(s) 243, 527, 636, 695, 731
HpyF10VI GCNNNNNNNGC 1 cut(s) 782
HpyF3I CTNAG 3 cut(s) 306, 348, 645
Hsp92I GRCGYC 1 cut(s) 168
Hsp92II CATG 3 cut(s) 41, 118, 789
Kzo9I GATC 3 cut(s) 418, 682, 705
LmnI GCTCC 2 cut(s) 404, 482
Lsp1109I GCAGC 3 cut(s) 130, 511, 602
LweI GCATC 2 cut(s) 252, 646
MaeI CTAG 1 cut(s) 581
MaeIII GTNAC 1 cut(s) 431
MalI GATC 3 cut(s) 420, 684, 707
MbiI CCGCTC 1 cut(s) 54
MboI GATC 3 cut(s) 418, 682, 705
MboII GAAGA 4 cut(s) 25, 28, 34, 248
MflI RGATCY 3 cut(s) 418, 682, 705
MhlI GDGCHC 1 cut(s) 281
MluCI AATT 3 cut(s) 75, 107, 200
MlyI GAGTC 1 cut(s) 321
MmeI TCCRAC 1 cut(s) 593
MnlI CCTC 5 cut(s) 44, 112, 505, 757, 766
Mph1103I ATGCAT 1 cut(s) 245
MseI TTAA 1 cut(s) 497
MspA1I CMGCKG 1 cut(s) 524
Mva1269I GAATGC 2 cut(s) 245, 638
MwoI GCNNNNNNNGC 1 cut(s) 782
NcoI CCATGG 1 cut(s) 37
NdeI CATATG 1 cut(s) 428
NdeII GATC 3 cut(s) 418, 682, 705
NlaIII CATG 3 cut(s) 41, 118, 789
NlaIV GGNNCC 3 cut(s) 58, 279, 554
NmuCI GTSAC 1 cut(s) 431
NsiI ATGCAT 1 cut(s) 245
PctI GAATGC 2 cut(s) 245, 638
PflMI CCANNNNNTGG 1 cut(s) 87
PkrI GCNGC 5 cut(s) 56, 145, 523, 526, 592
PleI GAGTC 1 cut(s) 321
PpsI GAGTC 1 cut(s) 321
PspFI CCCAGC 1 cut(s) 422
PspN4I GGNNCC 3 cut(s) 58, 279, 554
PspOMI GGGCCC 1 cut(s) 277
PspPI GGNCC 3 cut(s) 277, 278, 367
PstI CTGCAG 1 cut(s) 733
PsuI RGATCY 3 cut(s) 418, 682, 705
RsaI GTAC 1 cut(s) 224
RsaNI GTAC 1 cut(s) 223
SaqAI TTAA 1 cut(s) 497
SatI GCNGC 5 cut(s) 55, 144, 522, 525, 591
Sau3AI GATC 3 cut(s) 418, 682, 705
Sau96I GGNCC 3 cut(s) 277, 278, 367
SchI GAGTC 1 cut(s) 321
SduI GDGCHC 1 cut(s) 281
SetI ASST 9 cut(s) 62, 184, 349, 360, 379, 487, 508, 768, 782
SfaNI GCATC 2 cut(s) 252, 646
SfcI CTRYAG 1 cut(s) 729
SinI GGWCC 1 cut(s) 367
Sse9I AATT 3 cut(s) 75, 107, 200
SsiI CCGC 2 cut(s) 54, 522
SspMI CTAG 1 cut(s) 581
StyI CCWWGG 3 cut(s) 37, 273, 575
TaaI ACNGT 1 cut(s) 571
TaqI TCGA 1 cut(s) 762
TasI AATT 3 cut(s) 75, 107, 200
TatI WGTACW 1 cut(s) 222
TauI GCSGC 2 cut(s) 57, 524
Tru1I TTAA 1 cut(s) 497
Tru9I TTAA 1 cut(s) 497
TscAI CASTG 2 cut(s) 693, 733
TseFI GTSAC 1 cut(s) 431
TseI GCWGC 3 cut(s) 143, 524, 590
Tsp45I GTSAC 1 cut(s) 431
TspDTI ATGAA 3 cut(s) 35, 466, 600
TspRI CASTG 2 cut(s) 693, 733
Van91I CCANNNNNTGG 1 cut(s) 87
VpaK11BI GGWCC 1 cut(s) 367
XmiI GTMKAC 1 cut(s) 171
XspI CTAG 1 cut(s) 581
Zsp2I ATGCAT 1 cut(s) 245
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.