pycom12g11300
MYB Family

TSL-kinase interacting protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
Physical Location & Seq
Forward (+)
13517811 .. 13521596
3786 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom12g11300.2

Sequence Viewer

Length: 1587 bp
ATGCAGATAGGGTCAACAGTCATCATGGACTCTGAGGTACATCCTCATCAGGGGAGCTTCTTGGTTCAGGATGGAGGTCCAGTTGTAGCCCCAACCATCTCAACTCATGTCGCACAGCAGCAGCCCATGAAAAAAACAACACGGCAATGGGCTGCTTGGACACATCAAGAGGAGGAAAGTTTCTTTTCTGCGTTACGACAAGTTGGGAAGAATTTTGAAAAGATCACTCGACGTGTTCAAAGTAAAAACAAGGATCAGGTCAGGCATTATTACTATCGTCTTGTGAGGCGTATGAACAAGCTGCTGGGTCCAGAATTGTATTTGGATTCCAAAAATTCTAAAGATACGAATGCTGCTATGCTTCGATGGTGGTCTTTGCTGGAAAAATATAGTTGCAAAGCATCAAAGCTTCACTTGAAGCCCCGAAGGTTTAAGATCTTTATAGAAGCACTGGAACACCAACTCCTGAAAGACCGGAAGAAGAGTGTTAGGAAACGGCCTTCTCAGGGGGAAAACTGCCCTCCTAATGCTCCGAGTACTGTTTCCAATCAGAATAGACCATCAGGACATGATAATCGCACAGTTAAACTGGTTCTTGTTGACAGTCACAATATTCAGAAATTAGGACCTGGAAAAGCATCAATGAAGCGCAATGTAAATATAGGTGTTAATCGTAGCAACAAAGGAGACTCAAGTACCATGAAACCTGCTAGACAACGACGGAAACCAGGTGCTGTCTCGTCAGTGGCGTATAAAAAGTGGGAAAAGGCTGCAATTGCTGGGGTTTCTTTGGTTGCTGATGCTGCTGAGCACCTGGAGCGAGCAGCAACTGATAAAGAAGTTCAGCAGCAGGACAGAAGCACTGAAGGGCAAAGCTGCTCTGTTCCTGTTGGAACCGTCCTGTCCCCTTTGCCCACTTTCCCACAAAAAATTTACGCAGAGAACAATTGTATGAAACTTAAACTCCAGTTGTTCCCAATTGATGATGTTACTAGGAGAGCCTTGGAAATTGATAAACATAATCCACACTTGGAGCTCACTCTTAGTACTCGGAAAAAGATATCATCAGTTTTGGAACACCTAAATCGCAAATGGGGGAATTCAAATGTAGCATCGGGAGAGCTAATGCTTTTCCCTTACAGTGTTCAGAGAGAGAACCTGATGGGTTATCCGAGATGGGCACAAGACTCAGTTGTCAGTGCGGCGGATGTATACTCAACAATTGGAAGCCCTCCAGTTTTTCGTTTAAGGTACGGTTGGTTCTCCAATACTGAGCTCAGGTCTGTTGAATTCCAAGCACCTATAGCATCTTGCAGCATTCAAGGGGAGCACATGAATGTGGAGAAGAGGAACGAGCAGATTGTGGATTCAACTCCTATATCTCATCTATCAACTAACAATCAGTCTGTGGATAAGAACTCTCTTGCTTTGACATCAACTGATGAGCCCAATGAGATAAGTGGCTATGTCTCCTCAAGTCCAAACAATGTGGGGGCCCCTACAGAAATAAGGACATTGCATAGAAAGGAGGCTGGTGATCAGAATACCTCAGTACATCGGGGATCGATCTGGATGGCACGCGATTAA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

529

Amino Acids

59.49

Weight (kDa)

9.76

Isoelectric Point (pI)

49.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1193
Acc36I ACCTGC 1 cut(s) 715
AccI GTMKAC 1 cut(s) 1212
AccII CGCG 1 cut(s) 1581
AciI CCGC 2 cut(s) 1202, 1205
AclWI GGATC 2 cut(s) 261, 1570
AcsI RAATTY 5 cut(s) 211, 334, 930, 1099, 1289
AcuI CTGAAG 1 cut(s) 885
AfaI GTAC 6 cut(s) 39, 538, 697, 1048, 1253, 1554
AfiI CCNNNNNNNGG 2 cut(s) 50, 506
AflIII ACRYGT 1 cut(s) 232
AgsI TTSAA 7 cut(s) 218, 239, 418, 1104, 1289, 1322, 1371
AjiI CACGTC 1 cut(s) 233
AjnI CCWGG 3 cut(s) 628, 727, 813
AloI GAACNNNNNNTCC 2 cut(s) 447, 479
AluBI AGCT 7 cut(s) 57, 301, 409, 876, 1036, 1123, 1276
AluI AGCT 7 cut(s) 57, 301, 409, 876, 1036, 1123, 1276
Alw21I GWGCWC 4 cut(s) 813, 1038, 1278, 1332
Alw26I GTCTC 3 cut(s) 681, 742, 1474
AlwI GGATC 2 cut(s) 261, 1570
AlwNI CAGNNNCTG 2 cut(s) 734, 830
AoxI GGCC 2 cut(s) 497, 1494
ApaI GGGCCC 1 cut(s) 1498
ApoI RAATTY 5 cut(s) 211, 334, 930, 1099, 1289
AspLEI GCGC 1 cut(s) 651
AspS9I GGNCC 5 cut(s) 77, 308, 626, 1494, 1495
AsuHPI GGTGA 1 cut(s) 1547
AvaII GGWCC 3 cut(s) 77, 308, 626
BaeGI GKGCMC 2 cut(s) 1183, 1498
BaeI ACNNNNGTAYC 2 cut(s) 679, 712
BanII GRGCYC 4 cut(s) 1038, 1278, 1449, 1498
Bbv12I GWGCWC 4 cut(s) 813, 1038, 1278, 1332
BccI CCATC 7 cut(s) 65, 104, 360, 568, 1156, 1170, 1567
BceAI ACGGC 2 cut(s) 158, 512
BciT130I CCWGG 3 cut(s) 630, 729, 815
BclI TGATCA 1 cut(s) 1537
BcoDI GTCTC 3 cut(s) 681, 742, 1474
BfaI CTAG 2 cut(s) 711, 993
BfmI CTRYAG 2 cut(s) 1302, 1500
BfuAI ACCTGC 1 cut(s) 715
BglII AGATCT 1 cut(s) 435
BlpI GCTNAGC 1 cut(s) 807
BmcAI AGTACT 2 cut(s) 538, 1048
Bme1390I CCNGG 3 cut(s) 630, 729, 815
Bme18I GGWCC 3 cut(s) 77, 308, 626
BmgBI CACGTC 1 cut(s) 233
BmgT120I GGNCC 5 cut(s) 77, 308, 626, 1494, 1495
BmiI GGNNCC 5 cut(s) 309, 895, 1495, 1496, 1497
BmrFI CCNGG 3 cut(s) 630, 729, 815
BmsI GCATC 5 cut(s) 410, 647, 790, 1121, 1316
BpmI CTGGAG 3 cut(s) 836, 950, 1218
Bpu10I CCTNAGC 1 cut(s) 1277
Bpu1102I GCTNAGC 1 cut(s) 807
BpuEI CTTGAG 2 cut(s) 676, 1459
Bsa29I ATCGAT 1 cut(s) 1565
BsaJI CCNNGG 1 cut(s) 1002
BsaWI WCCGGW 1 cut(s) 474
BsaXI ACNNNNNCTCC 6 cut(s) 66, 96, 447, 477, 948, 978
Bsc4I CCNNNNNNNGG 2 cut(s) 50, 506
Bse1I ACTGG 5 cut(s) 80, 456, 594, 967, 1235
Bse3DI GCAATG 3 cut(s) 152, 658, 1514
BseBI CCWGG 3 cut(s) 630, 729, 815
BseCI ATCGAT 1 cut(s) 1565
BseDI CCNNGG 1 cut(s) 1002
BseGI GGATG 4 cut(s) 40, 76, 1213, 1578
BseLI CCNNNNNNNGG 2 cut(s) 50, 506
BseMI GCAATG 3 cut(s) 152, 658, 1514
BseMII CTCAG 7 cut(s) 24, 518, 798, 1203, 1263, 1291, 1563
BseNI ACTGG 5 cut(s) 80, 456, 594, 967, 1235
BseRI GAGGAG 2 cut(s) 185, 1462
BseSI GKGCMC 2 cut(s) 1183, 1498
BseYI CCCAGC 2 cut(s) 304, 779
Bsh1236I CGCG 1 cut(s) 1581
BshFI GGCC 2 cut(s) 499, 1496
BshVI ATCGAT 1 cut(s) 1565
BsiHKAI GWGCWC 4 cut(s) 813, 1038, 1278, 1332
BsiSI CCGG 1 cut(s) 475
BslFI GGGAC 1 cut(s) 889
BslI CCNNNNNNNGG 2 cut(s) 50, 506
BsmAI GTCTC 3 cut(s) 681, 742, 1474
BsmFI GGGAC 1 cut(s) 889
BsmI GAATGC 2 cut(s) 355, 1317
BsnI GGCC 2 cut(s) 499, 1496
Bsp120I GGGCCC 1 cut(s) 1494
Bsp1286I GDGCHC 7 cut(s) 813, 1038, 1183, 1278, 1332, 1449, 1498
Bsp143I GATC 6 cut(s) 222, 253, 435, 1537, 1562, 1566
Bsp1720I GCTNAGC 1 cut(s) 807
BspACI CCGC 2 cut(s) 1202, 1205
BspANI GGCC 2 cut(s) 499, 1496
BspCNI CTCAG 7 cut(s) 25, 517, 799, 1202, 1264, 1290, 1562
BspDI ATCGAT 1 cut(s) 1565
BspFNI CGCG 1 cut(s) 1581
BspLI GGNNCC 5 cut(s) 309, 895, 1495, 1496, 1497
BspMI ACCTGC 1 cut(s) 715
BspPI GGATC 2 cut(s) 261, 1570
BsrDI GCAATG 3 cut(s) 152, 658, 1514
BsrI ACTGG 5 cut(s) 80, 456, 594, 967, 1235
BssECI CCNNGG 1 cut(s) 1002
BssMI GATC 6 cut(s) 222, 253, 435, 1537, 1562, 1566
BssNAI GTATAC 1 cut(s) 1213
BssT1I CCWWGG 1 cut(s) 1002
Bst1107I GTATAC 1 cut(s) 1213
Bst2UI CCWGG 3 cut(s) 630, 729, 815
Bst4CI ACNGT 7 cut(s) 19, 541, 583, 605, 898, 1142, 1256
Bst6I CTCTTC 2 cut(s) 476, 1340
BstC8I GCNNGC 2 cut(s) 822, 1579
BstDEI CTNAG 8 cut(s) 33, 504, 807, 1043, 1189, 1272, 1277, 1549
BstF5I GGATG 4 cut(s) 40, 76, 1213, 1578
BstFNI CGCG 1 cut(s) 1581
BstHHI GCGC 1 cut(s) 651
BstKTI GATC 6 cut(s) 225, 256, 438, 1540, 1565, 1569
BstMAI GTCTC 3 cut(s) 681, 742, 1474
BstMBI GATC 6 cut(s) 222, 253, 435, 1537, 1562, 1566
BstMWI GCNNNNNNNGC 4 cut(s) 776, 803, 817, 1304
BstNI CCWGG 3 cut(s) 630, 729, 815
BstSCI CCNGG 3 cut(s) 628, 727, 813
BstSFI CTRYAG 2 cut(s) 1302, 1500
BstSLI GKGCMC 2 cut(s) 1183, 1498
BstUI CGCG 1 cut(s) 1581
BstX2I RGATCY 1 cut(s) 435
BstYI RGATCY 1 cut(s) 435
BstZ17I GTATAC 1 cut(s) 1213
Bsu15I ATCGAT 1 cut(s) 1565
BsuRI GGCC 2 cut(s) 499, 1496
BsuTUI ATCGAT 1 cut(s) 1565
BtrI CACGTC 1 cut(s) 233
BtsCI GGATG 4 cut(s) 40, 76, 1213, 1578
BtsIMutI CAGTG 5 cut(s) 449, 750, 861, 1147, 1204
BveI ACCTGC 1 cut(s) 715
Cac8I GCNNGC 2 cut(s) 822, 1579
CaiI CAGNNNCTG 2 cut(s) 734, 830
CfoI GCGC 1 cut(s) 651
Cfr13I GGNCC 5 cut(s) 77, 308, 626, 1494, 1495
ClaI ATCGAT 1 cut(s) 1565
CsiI ACCWGGT 1 cut(s) 727
Csp6I GTAC 6 cut(s) 38, 537, 696, 1047, 1252, 1553
CspCI CAANNNNNGTGG 2 cut(s) 1470, 1505
CviAII CATG 6 cut(s) 25, 107, 127, 569, 700, 1333
CviQI GTAC 6 cut(s) 38, 537, 696, 1047, 1252, 1553
DdeI CTNAG 8 cut(s) 33, 504, 807, 1043, 1189, 1272, 1277, 1549
DpnI GATC 6 cut(s) 224, 255, 437, 1539, 1564, 1568
DpnII GATC 6 cut(s) 222, 253, 435, 1537, 1562, 1566
DrdI GACNNNNNNGTC 1 cut(s) 1193
DseDI GACNNNNNNGTC 1 cut(s) 1193
Eam1104I CTCTTC 2 cut(s) 476, 1340
EarI CTCTTC 2 cut(s) 476, 1340
EciI GGCGGA 1 cut(s) 1220
Ecl136II GAGCTC 2 cut(s) 1036, 1276
Eco130I CCWWGG 1 cut(s) 1002
Eco24I GRGCYC 4 cut(s) 1038, 1278, 1449, 1498
Eco32I GATATC 1 cut(s) 1062
Eco47I GGWCC 3 cut(s) 77, 308, 626
Eco53kI GAGCTC 2 cut(s) 1036, 1276
Eco57I CTGAAG 1 cut(s) 885
EcoICRI GAGCTC 2 cut(s) 1036, 1276
EcoO109I RGGNCCY 3 cut(s) 626, 1494, 1495
EcoRI GAATTC 2 cut(s) 1099, 1289
EcoRII CCWGG 3 cut(s) 628, 727, 813
EcoRV GATATC 1 cut(s) 1062
EcoT14I CCWWGG 1 cut(s) 1002
EcoT38I GRGCYC 4 cut(s) 1038, 1278, 1449, 1498
ErhI CCWWGG 1 cut(s) 1002
FaeI CATG 6 cut(s) 28, 110, 130, 572, 703, 1336
FalI AAGNNNNNCTT 2 cut(s) 398, 430
FaqI GGGAC 1 cut(s) 889
FatI CATG 6 cut(s) 24, 106, 126, 568, 699, 1332
FbaI TGATCA 1 cut(s) 1537
FblI GTMKAC 1 cut(s) 1212
FokI GGATG 3 cut(s) 27, 83, 1220
FriOI GRGCYC 4 cut(s) 1038, 1278, 1449, 1498
FspBI CTAG 2 cut(s) 711, 993
GlaI GCGC 1 cut(s) 650
GsaI CCCAGC 2 cut(s) 308, 783
GsuI CTGGAG 3 cut(s) 836, 950, 1218
HaeIII GGCC 2 cut(s) 499, 1496
HapII CCGG 1 cut(s) 475
HhaI GCGC 1 cut(s) 651
Hin1II CATG 6 cut(s) 28, 110, 130, 572, 703, 1336
Hin6I GCGC 1 cut(s) 649
HinP1I GCGC 1 cut(s) 649
HincII GTYRAC 2 cut(s) 15, 601
HindII GTYRAC 2 cut(s) 15, 601
HindIII AAGCTT 1 cut(s) 407
HinfI GANTC 5 cut(s) 29, 326, 689, 1187, 1367
HpaII CCGG 1 cut(s) 475
HphI GGTGA 1 cut(s) 1547
Hpy166II GTNNAC 3 cut(s) 15, 601, 1213
Hpy188I TCNGA 8 cut(s) 34, 534, 552, 618, 1053, 1149, 1173, 1542
Hpy188III TCNNGA 7 cut(s) 68, 167, 311, 466, 564, 1116, 1570
Hpy8I GTNNAC 3 cut(s) 15, 601, 1213
Hpy99I CGWCG 2 cut(s) 234, 723
HpyAV CCTTC 3 cut(s) 420, 510, 860
HpyCH4III ACNGT 7 cut(s) 19, 541, 583, 605, 898, 1142, 1256
HpyCH4IV ACGT 1 cut(s) 232
HpyCH4V TGCA 5 cut(s) 4, 396, 773, 1314, 1519
HpyF10VI GCNNNNNNNGC 4 cut(s) 776, 803, 817, 1304
HpyF3I CTNAG 8 cut(s) 33, 504, 807, 1043, 1189, 1272, 1277, 1549
HpySE526I ACGT 1 cut(s) 232
Hsp92II CATG 6 cut(s) 28, 110, 130, 572, 703, 1336
HspAI GCGC 1 cut(s) 649
Ksp22I TGATCA 1 cut(s) 1537
Kzo9I GATC 6 cut(s) 222, 253, 435, 1537, 1562, 1566
LmnI GCTCC 5 cut(s) 54, 535, 817, 1033, 1327
LweI GCATC 5 cut(s) 410, 647, 790, 1121, 1316
MabI ACCWGGT 1 cut(s) 727
MaeI CTAG 2 cut(s) 711, 993
MaeII ACGT 1 cut(s) 232
MaeIII GTNAC 3 cut(s) 192, 605, 988
MalI GATC 6 cut(s) 224, 255, 437, 1539, 1564, 1568
MboI GATC 6 cut(s) 222, 253, 435, 1537, 1562, 1566
MboII GAAGA 4 cut(s) 220, 490, 493, 1357
MfeI CAATTG 4 cut(s) 774, 946, 978, 1221
MflI RGATCY 1 cut(s) 435
MhlI GDGCHC 7 cut(s) 813, 1038, 1183, 1278, 1332, 1449, 1498
MlyI GAGTC 3 cut(s) 23, 683, 1181
MmeI TCCRAC 1 cut(s) 871
MseI TTAA 6 cut(s) 432, 585, 669, 960, 1247, 1585
MslI CAYNNNNRTG 3 cut(s) 145, 1335, 1337
MspI CCGG 1 cut(s) 475
MspR9I CCNGG 3 cut(s) 630, 729, 815
MunI CAATTG 4 cut(s) 774, 946, 978, 1221
Mva1269I GAATGC 2 cut(s) 355, 1317
MvaI CCWGG 3 cut(s) 630, 729, 815
MvnI CGCG 1 cut(s) 1581
MwoI GCNNNNNNNGC 4 cut(s) 776, 803, 817, 1304
NdeII GATC 6 cut(s) 222, 253, 435, 1537, 1562, 1566
NlaIII CATG 6 cut(s) 28, 110, 130, 572, 703, 1336
NlaIV GGNNCC 5 cut(s) 309, 895, 1495, 1496, 1497
NmuCI GTSAC 1 cut(s) 605
PcsI WCGNNNNNNNCGW 1 cut(s) 746
PctI GAATGC 2 cut(s) 355, 1317
PfeI GAWTC 2 cut(s) 326, 1367
PleI GAGTC 3 cut(s) 23, 683, 1181
PpsI GAGTC 3 cut(s) 23, 683, 1181
PpuMI RGGWCCY 1 cut(s) 626
Psp124BI GAGCTC 2 cut(s) 1038, 1278
Psp5II RGGWCCY 1 cut(s) 626
Psp6I CCWGG 3 cut(s) 628, 727, 813
PspFI CCCAGC 2 cut(s) 304, 779
PspGI CCWGG 3 cut(s) 628, 727, 813
PspN4I GGNNCC 5 cut(s) 309, 895, 1495, 1496, 1497
PspOMI GGGCCC 1 cut(s) 1494
PspPI GGNCC 5 cut(s) 77, 308, 626, 1494, 1495
PspPPI RGGWCCY 1 cut(s) 626
PsrI GAACNNNNNNTAC 2 cut(s) 1244, 1276
PstNI CAGNNNCTG 2 cut(s) 734, 830
PsuI RGATCY 1 cut(s) 435
RsaI GTAC 6 cut(s) 39, 538, 697, 1048, 1253, 1554
RsaNI GTAC 6 cut(s) 38, 537, 696, 1047, 1252, 1553
RseI CAYNNNNRTG 3 cut(s) 145, 1335, 1337
SacI GAGCTC 2 cut(s) 1038, 1278
SaqAI TTAA 6 cut(s) 432, 585, 669, 960, 1247, 1585
Sau3AI GATC 6 cut(s) 222, 253, 435, 1537, 1562, 1566
Sau96I GGNCC 5 cut(s) 77, 308, 626, 1494, 1495
ScaI AGTACT 2 cut(s) 538, 1048
SchI GAGTC 3 cut(s) 23, 683, 1181
ScrFI CCNGG 3 cut(s) 630, 729, 815
SduI GDGCHC 7 cut(s) 813, 1038, 1183, 1278, 1332, 1449, 1498
SexAI ACCWGGT 1 cut(s) 727
SfaNI GCATC 5 cut(s) 410, 647, 790, 1121, 1316
SfcI CTRYAG 2 cut(s) 1302, 1500
SinI GGWCC 3 cut(s) 77, 308, 626
SmiMI CAYNNNNRTG 3 cut(s) 145, 1335, 1337
SmlI CTYRAG 2 cut(s) 691, 1474
SmoI CTYRAG 2 cut(s) 691, 1474
SsiI CCGC 2 cut(s) 1202, 1205
SspI AATATT 1 cut(s) 613
SspMI CTAG 2 cut(s) 711, 993
SstI GAGCTC 2 cut(s) 1038, 1278
StyD4I CCNGG 3 cut(s) 628, 727, 813
StyI CCWWGG 1 cut(s) 1002
TaaI ACNGT 7 cut(s) 19, 541, 583, 605, 898, 1142, 1256
TaiI ACGT 1 cut(s) 235
TaqI TCGA 3 cut(s) 229, 364, 1565
TatI WGTACW 3 cut(s) 536, 1046, 1552
TauI GCSGC 1 cut(s) 1205
TfiI GAWTC 2 cut(s) 326, 1367
Tru1I TTAA 6 cut(s) 432, 585, 669, 960, 1247, 1585
Tru9I TTAA 6 cut(s) 432, 585, 669, 960, 1247, 1585
TscAI CASTG 5 cut(s) 456, 750, 868, 1147, 1204
TseFI GTSAC 1 cut(s) 605
Tsp45I GTSAC 1 cut(s) 605
TspDTI ATGAA 6 cut(s) 143, 308, 659, 716, 968, 1349
TspGWI ACGGA 1 cut(s) 736
TspRI CASTG 5 cut(s) 456, 750, 868, 1147, 1204
VpaK11BI GGWCC 3 cut(s) 77, 308, 626
XapI RAATTY 5 cut(s) 211, 334, 930, 1099, 1289
XmiI GTMKAC 1 cut(s) 1212
XspI CTAG 2 cut(s) 711, 993
ZrmI AGTACT 2 cut(s) 538, 1048
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.