Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0005600.1

Orthogroup ID

OG0005307

Physical Location & Seq

Genomic Coordinates Reverse (-)

50061 .. 54974

Gene Structure 4914 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0005600.1_g000013.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2337 bp

atggacagtgaggcacacccgcgtcagggaagtattttggttcaggagggagatcctgctttagccccatccacctcaaaccatgttgccattcagcagcctgttaaaaaaccaacacggcaatgggctgcttggacacatcaagaagagcaaagtttttttgctgcactacgacaagttggcaagaattttgagaaaatcacttgtcgtgttcaaagtaaaaacaaggatcaggtcaggcattattactatcgtcttgtgaggcgtatgaacaagctgctgggtccaggattatatttggattccagaaattctaaagatactaatgctgctatgcttagatggtggtctttgctggaaaagtatagctgcaaagcatcaaagcttcacttgaagccccgacggtttaagatttttatggaagcattggaacaccaactccttaaagaccggaagaagactgtcaggaaacggccttctcagggggaaaactgccctcctgaggctcccagcactgtctcaaatcagagtagaccatcagaacatgatcgtccagttaaacttgttctcgttgacagtcacaatattcagaaatcaggacctggaaaagcatcattaaagcgcagtggaagcataggtgttaatcgtggcaacaaaggagatgcaagtaccatgaaacctgctagacaacgacgtaaaccaggtgttgtctcttcaacagcagcatataaaaagtgggagaaggctgcaattgctggggtttctttggttgcagatgctgctgagcacttggagcgaacaatcgataaagatgttggacaagacaaaagcagtgcagagaaaaatagtgctgttcctgttggaaattttctgcctcctatgcccaattttccacaaaatatttatgcagagaacaacataaacaactctgtgaagcttaaactccagttgttcccaattgatgatagtactagaaaagccttggaaatggataaacataatcctcacctggagcttacgctccctactcggaaaaagatatcctcagttatggaacacctaaatcgcaaatggggaagttcaagtgtggcatcaggagagctaatgcttttccctaatagtgtccagcaggattgtccaacaggctatctgagatggacacaagactcaaatgtcagtgcaggagatgtatatgctatgattggaagccctccagttttccgattaaggtatggttggttctccactactgagcttggatctgtttcatcgcaagcacctgtagcatcttgcacgattccagttgagcatgatatgaatgtggagaagatgaaggatcctgtattggaatcagcatctatttctccactatcagctagtaatcaatgtgtagatatccacaaagacctcttaccctcagtgataaaaagtcattctcttgctcaaacttcagctggtgagcccaaccagaagaataaccttgagggagaccctacagaaagtgcatcatggcatgaaaaggttgcaggtgatgagggtatcttaagacatcaaggagaagtggatggcctgagattacataacggcactgcactatcagccaaagagtgggctgatagcctaaccaacattagtgttggagatctcctttctggggtgcctcatgatctagatgctaactgcattgatcaacctcttgctggaaggtcccagtgtcttccgcagatcccatttagctgtgattcatttgatgctgcgattgctgctcatatttctagacagaagaacaagatgggatgtgagcctactatggtatcccatgtatcgtccatctgggatgctgaagaaacatgtgatgcctttgtgtttcaaaagaattcggctttccgtcaacagtctaccagttcatctggtgttgctcctccaggggactgcaaactgatggctagtacaagcttagtgggctgtgatcgtatggttgaggacttacctgcagtagagaggccaattaatgatcctcaacgagatcctatggatgagtgtcagtctgatccacatatcctagaaagttcagtgaaagatttcaacgctttagcagatatatactggcctgaatcattaggaccattagatttggagctaccatcatctaaataccataacgaagattttattctgaatgatagtctcagtgggctgaaccgccttattgccagcagtctggatgcatttcaaaattgctctttctttggttcaaacaagaaagaaccaacgccatcagttgaggctcgagaaactatttccttctcagattttaaaattggcaatggagtttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003682 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_DNA-binding

Protein Analysis

778

Amino Acids

85.86

Weight (kDa)

7.09

Isoelectric Point (pI)

51.09

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005307)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G36960 AT2G36960 AT2G36960
fragaria_vesca	FvH4_6g16260 FvH4_6g16260 FvH4_6g16260 FvH4_6g16260 FvH4_6g16260 FvH4_6g16260
malus_domestica	MD12G1113900.v1.1
prunus_persica	Prupe.6G232900_v2.0.a1
pyrus_communis	pycom12g11300 pycom12g11310
rosa_chinensis	RchiOBHm_Chr3g0470121
rosa_laevigata	RLG00000024295
rosa_multiflora	Rmu_co8461125.1_g000001 Rmu_sc0005600.1_g000013
rosa_roxburghii	Rroxscaffold_6G00411160
rosa_rugosa	Rorug03G0106900 Rorug03G0107000 Rorug03G0107000 Rorug03G0107100
rosa_samantha	Rh3AG156300 Rh3BG180300 Rh3CG171100 Rh3DG194700
rosa_wichuraiana	Rw3G014710 Rw3G014780 Rw3G014800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1517
AasI	GACNNNNNNGTC	1 cut(s)	1172
Acc36I	ACCTGC	3 cut(s)	688, 1517, 1999
AccB1I	GGYRCC	1 cut(s)	1657
AccB7I	CCANNNNNTGG	1 cut(s)	1608
AccI	GTMKAC	2 cut(s)	532, 1898
AccII	CGCG	1 cut(s)	22
AciI	CCGC	3 cut(s)	20, 1721, 2203
AclWI	GGATC	9 cut(s)	47, 237, 1267, 1331, 1344, 1720, 2009, 2021, 2045
AcsI	RAATTY	4 cut(s)	187, 310, 865, 1876
AcuI	CTGAAG	2 cut(s)	1434, 1863
AfaI	GTAC	3 cut(s)	670, 970, 1951
AfiI	CCNNNNNNNGG	7 cut(s)	25, 26, 482, 502, 1608, 1654, 1700
AflII	CTTAAG	1 cut(s)	1543
AflIII	ACRYGT	1 cut(s)	1850
AgsI	TTSAA	8 cut(s)	215, 394, 717, 1083, 1871, 2086, 2234, 2256
AjnI	CCWGG	5 cut(s)	286, 601, 700, 1008, 1924
AloI	GAACNNNNNNTCC	2 cut(s)	423, 455
Alw21I	GWGCWC	1 cut(s)	789
Alw26I	GTCTC	4 cut(s)	523, 715, 1482, 2192
AlwI	GGATC	9 cut(s)	47, 237, 1267, 1331, 1344, 1720, 2009, 2021, 2045
AlwNI	CAGNNNCTG	2 cut(s)	602, 779
Ama87I	CYCGRG	1 cut(s)	2289
AoxI	GGCC	4 cut(s)	473, 1567, 2003, 2108
ApoI	RAATTY	4 cut(s)	187, 310, 865, 1876
AseI	ATTAAT	1 cut(s)	2010
Asp700I	GAANNNNTTC	1 cut(s)	2081
AspLEI	GCGC	1 cut(s)	624
AspS9I	GGNCC	4 cut(s)	284, 599, 1707, 2123
AsuHPI	GGTGA	3 cut(s)	998, 1469, 1541
AvaI	CYCGRG	1 cut(s)	2289
AvaII	GGWCC	4 cut(s)	284, 599, 1707, 2123
AxyI	CCTNAGG	1 cut(s)	501
BaeI	ACNNNNGTAYC	2 cut(s)	1797, 1830
BamHI	GGATCC	1 cut(s)	1336
BanI	GGYRCC	1 cut(s)	1657
BanII	GRGCYC	1 cut(s)	1464
BbsI	GAAGAC	2 cut(s)	464, 1709
Bbv12I	GWGCWC	1 cut(s)	789
BceAI	ACGGC	3 cut(s)	134, 488, 1600
BciT130I	CCWGG	5 cut(s)	288, 603, 702, 1010, 1926
BciVI	GTATCC	1 cut(s)	1825
BclI	TGATCA	1 cut(s)	1687
BcoDI	GTCTC	4 cut(s)	523, 715, 1482, 2192
BfaI	CTAG	7 cut(s)	684, 972, 1377, 1670, 1776, 1947, 2063
BfmI	CTRYAG	3 cut(s)	1281, 1494, 1992
BfrI	CTTAAG	1 cut(s)	1543
BfuAI	ACCTGC	3 cut(s)	688, 1517, 1999
BfuI	GTATCC	1 cut(s)	1825
BglII	AGATCT	1 cut(s)	1642
BlpI	GCTNAGC	1 cut(s)	783
BmcAI	AGTACT	1 cut(s)	970
Bme1390I	CCNGG	5 cut(s)	288, 603, 702, 1010, 1926
Bme18I	GGWCC	4 cut(s)	284, 599, 1707, 2123
BmeT110I	CYCGRG	1 cut(s)	2289
BmgT120I	GGNCC	4 cut(s)	284, 599, 1707, 2123
BmiI	GGNNCC	5 cut(s)	285, 507, 1338, 1659, 1709
BmrFI	CCNGG	5 cut(s)	288, 603, 702, 1010, 1926
BmrI	ACTGGG	1 cut(s)	1705
BmuI	ACTGGG	1 cut(s)	1705
BpiI	GAAGAC	2 cut(s)	464, 1709
BpmI	CTGGAG	4 cut(s)	929, 1031, 1197, 1908
Bpu1102I	GCTNAGC	1 cut(s)	783
BpuEI	CTTGAG	1 cut(s)	1502
Bsa29I	ATCGAT	1 cut(s)	804
BsaI	GGTCTC	1 cut(s)	1482
BsaJI	CCNNGG	2 cut(s)	981, 1925
BsaWI	WCCGGW	1 cut(s)	450
BsaXI	ACNNNNNCTCC	2 cut(s)	423, 453
Bsc4I	CCNNNNNNNGG	7 cut(s)	25, 26, 482, 502, 1608, 1654, 1700
Bse1I	ACTGG	7 cut(s)	554, 946, 1214, 1301, 1711, 1902, 2111
Bse21I	CCTNAGG	1 cut(s)	501
Bse3DI	GCAATG	2 cut(s)	128, 2332
BseBI	CCWGG	5 cut(s)	288, 603, 702, 1010, 1926
BseCI	ATCGAT	1 cut(s)	804
BseDI	CCNNGG	2 cut(s)	981, 1925
BseGI	GGATG	6 cut(s)	68, 1570, 1802, 1843, 2041, 2230
BseLI	CCNNNNNNNGG	7 cut(s)	25, 26, 482, 502, 1608, 1654, 1700
BseMI	GCAATG	2 cut(s)	128, 2332
BseNI	ACTGG	7 cut(s)	554, 946, 1214, 1301, 1711, 1902, 2111
BseRI	GAGGAG	1 cut(s)	1911
BseYI	CCCAGC	3 cut(s)	280, 509, 755
BsgI	GTGCAG	4 cut(s)	150, 855, 1200, 1575
Bsh1236I	CGCG	1 cut(s)	22
BshFI	GGCC	4 cut(s)	475, 1569, 2005, 2110
BshNI	GGYRCC	1 cut(s)	1657
BshVI	ATCGAT	1 cut(s)	804
BsiHKAI	GWGCWC	1 cut(s)	789
BsiHKCI	CYCGRG	1 cut(s)	2289
BsiSI	CCGG	1 cut(s)	451
BslFI	GGGAC	2 cut(s)	1693, 1943
BslI	CCNNNNNNNGG	7 cut(s)	25, 26, 482, 502, 1608, 1654, 1700
BsmAI	GTCTC	4 cut(s)	523, 715, 1482, 2192
BsmFI	GGGAC	2 cut(s)	1693, 1943
BsnI	GGCC	4 cut(s)	475, 1569, 2005, 2110
Bso31I	GGTCTC	1 cut(s)	1482
BsoBI	CYCGRG	1 cut(s)	2289
Bsp1286I	GDGCHC	2 cut(s)	789, 1464
Bsp1720I	GCTNAGC	1 cut(s)	783
BspACI	CCGC	3 cut(s)	20, 1721, 2203
BspANI	GGCC	4 cut(s)	475, 1569, 2005, 2110
BspDI	ATCGAT	1 cut(s)	804
BspFNI	CGCG	1 cut(s)	22
BspHI	TCATGA	1 cut(s)	1663
BspLI	GGNNCC	5 cut(s)	285, 507, 1338, 1659, 1709
BspMAI	CTGCAG	1 cut(s)	1996
BspMI	ACCTGC	3 cut(s)	688, 1517, 1999
BspPI	GGATC	9 cut(s)	47, 237, 1267, 1331, 1344, 1720, 2009, 2021, 2045
BspQI	GCTCTTC	1 cut(s)	141
BspT107I	GGYRCC	1 cut(s)	1657
BspTI	CTTAAG	1 cut(s)	1543
BspTNI	GGTCTC	1 cut(s)	1482
BsrDI	GCAATG	2 cut(s)	128, 2332
BsrI	ACTGG	7 cut(s)	554, 946, 1214, 1301, 1711, 1902, 2111
BssECI	CCNNGG	2 cut(s)	981, 1925
BssT1I	CCWWGG	1 cut(s)	981
Bst2UI	CCWGG	5 cut(s)	288, 603, 702, 1010, 1926
Bst4CI	ACNGT	6 cut(s)	8, 405, 463, 517, 578, 1896
Bst6I	CTCTTC	2 cut(s)	141, 718
BstAFI	CTTAAG	1 cut(s)	1543
BstAPI	GCANNNNNTGC	1 cut(s)	779
BstC8I	GCNNGC	2 cut(s)	1275, 2215
BstF5I	GGATG	6 cut(s)	68, 1570, 1802, 1843, 2041, 2230
BstFNI	CGCG	1 cut(s)	22
BstHHI	GCGC	1 cut(s)	624
BstMAI	GTCTC	4 cut(s)	523, 715, 1482, 2192
BstNI	CCWGG	5 cut(s)	288, 603, 702, 1010, 1926
BstNSI	RCATGY	1 cut(s)	1854
BstSCI	CCNGG	5 cut(s)	286, 601, 700, 1008, 1924
BstSFI	CTRYAG	3 cut(s)	1281, 1494, 1992
BstUI	CGCG	1 cut(s)	22
BstV2I	GAAGAC	2 cut(s)	464, 1709
BstX2I	RGATCY	6 cut(s)	52, 1259, 1336, 1642, 1725, 2026
BstXI	CCANNNNNNTGG	1 cut(s)	2221
BstYI	RGATCY	6 cut(s)	52, 1259, 1336, 1642, 1725, 2026
Bsu15I	ATCGAT	1 cut(s)	804
Bsu36I	CCTNAGG	1 cut(s)	501
BsuI	GTATCC	1 cut(s)	1825
BsuRI	GGCC	4 cut(s)	475, 1569, 2005, 2110
BsuTUI	ATCGAT	1 cut(s)	804
BtgZI	GCGATG	1 cut(s)	1254
BtsCI	GGATG	6 cut(s)	68, 1570, 1802, 1843, 2041, 2230
BtsI	GCAGTG	3 cut(s)	631, 838, 1587
BveI	ACCTGC	3 cut(s)	688, 1517, 1999
Cac8I	GCNNGC	2 cut(s)	1275, 2215
CaiI	CAGNNNCTG	2 cut(s)	602, 779
CciI	TCATGA	1 cut(s)	1663
CfoI	GCGC	1 cut(s)	624
Cfr13I	GGNCC	4 cut(s)	284, 599, 1707, 2123
ClaI	ATCGAT	1 cut(s)	804
CseI	GACGC	1 cut(s)	11
CsiI	ACCWGGT	1 cut(s)	700
Csp6I	GTAC	3 cut(s)	669, 969, 1950
CspCI	CAANNNNNGTGG	2 cut(s)	1941, 1976
CviAII	CATG	9 cut(s)	83, 545, 673, 1310, 1509, 1514, 1664, 1820, 1851
CviQI	GTAC	3 cut(s)	669, 969, 1950
DraI	TTTAAA	1 cut(s)	2317
DrdI	GACNNNNNNGTC	1 cut(s)	1172
DseDI	GACNNNNNNGTC	1 cut(s)	1172
Eam1104I	CTCTTC	2 cut(s)	141, 718
EarI	CTCTTC	2 cut(s)	141, 718
Eco130I	CCWWGG	1 cut(s)	981
Eco24I	GRGCYC	1 cut(s)	1464
Eco31I	GGTCTC	1 cut(s)	1482
Eco32I	GATATC	2 cut(s)	1041, 1396
Eco47I	GGWCC	4 cut(s)	284, 599, 1707, 2123
Eco57I	CTGAAG	2 cut(s)	1434, 1863
Eco81I	CCTNAGG	1 cut(s)	501
Eco88I	CYCGRG	1 cut(s)	2289
EcoO109I	RGGNCCY	2 cut(s)	599, 1707
EcoRI	GAATTC	1 cut(s)	1876
EcoRII	CCWGG	5 cut(s)	286, 601, 700, 1008, 1924
EcoRV	GATATC	2 cut(s)	1041, 1396
EcoT14I	CCWWGG	1 cut(s)	981
EcoT22I	ATGCAT	1 cut(s)	2230
EcoT38I	GRGCYC	1 cut(s)	1464
ErhI	CCWWGG	1 cut(s)	981
FaeI	CATG	9 cut(s)	86, 548, 676, 1313, 1512, 1517, 1667, 1823, 1854
FalI	AAGNNNNNCTT	2 cut(s)	374, 406
FaqI	GGGAC	2 cut(s)	1693, 1943
FatI	CATG	9 cut(s)	82, 544, 672, 1309, 1508, 1513, 1663, 1819, 1850
FauI	CCCGC	1 cut(s)	27
FbaI	TGATCA	1 cut(s)	1687
FblI	GTMKAC	2 cut(s)	532, 1898
FokI	GGATG	6 cut(s)	55, 1577, 1809, 1850, 2048, 2237
FriOI	GRGCYC	1 cut(s)	1464
FspBI	CTAG	7 cut(s)	684, 972, 1377, 1670, 1776, 1947, 2063
GlaI	GCGC	1 cut(s)	623
GsaI	CCCAGC	3 cut(s)	284, 513, 759
GsuI	CTGGAG	4 cut(s)	929, 1031, 1197, 1908
HaeIII	GGCC	4 cut(s)	475, 1569, 2005, 2110
HapII	CCGG	1 cut(s)	451
HgaI	GACGC	1 cut(s)	11
HhaI	GCGC	1 cut(s)	624
Hin1II	CATG	9 cut(s)	86, 548, 676, 1313, 1512, 1517, 1667, 1823, 1854
Hin6I	GCGC	1 cut(s)	622
HinP1I	GCGC	1 cut(s)	622
HincII	GTYRAC	2 cut(s)	574, 1892
HindII	GTYRAC	2 cut(s)	574, 1892
HindIII	AAGCTT	3 cut(s)	383, 935, 1954
HinfI	GANTC	6 cut(s)	302, 1166, 1297, 1349, 1742, 2114
HpaII	CCGG	1 cut(s)	451
HphI	GGTGA	3 cut(s)	998, 1469, 1541
Hpy166II	GTNNAC	5 cut(s)	533, 574, 698, 1892, 1899
Hpy188I	TCNGA	9 cut(s)	528, 541, 591, 1032, 1152, 1223, 2050, 2178, 2311
Hpy8I	GTNNAC	5 cut(s)	533, 574, 698, 1892, 1899
Hpy99I	CGWCG	2 cut(s)	405, 696
HpyAV	CCTTC	5 cut(s)	486, 736, 1327, 1698, 2314
HpyCH4III	ACNGT	6 cut(s)	8, 405, 463, 517, 578, 1896
HpyCH4IV	ACGT	1 cut(s)	694
HpySE526I	ACGT	1 cut(s)	694
Hsp92II	CATG	9 cut(s)	86, 548, 676, 1313, 1512, 1517, 1667, 1823, 1854
HspAI	GCGC	1 cut(s)	622
Ksp22I	TGATCA	1 cut(s)	1687
LguI	GCTCTTC	1 cut(s)	141
LmnI	GCTCC	6 cut(s)	511, 793, 1012, 1026, 1924, 2137
MabI	ACCWGGT	1 cut(s)	700
MaeI	CTAG	7 cut(s)	684, 972, 1377, 1670, 1776, 1947, 2063
MaeII	ACGT	1 cut(s)	694
MaeIII	GTNAC	1 cut(s)	578
MfeI	CAATTG	2 cut(s)	750, 957
MflI	RGATCY	6 cut(s)	52, 1259, 1336, 1642, 1725, 2026
MhlI	GDGCHC	2 cut(s)	789, 1464
MlyI	GAGTC	1 cut(s)	1160
MmeI	TCCRAC	4 cut(s)	796, 841, 1163, 1618
Mph1103I	ATGCAT	1 cut(s)	2230
MroXI	GAANNNNTTC	1 cut(s)	2081
MslI	CAYNNNNRTG	1 cut(s)	121
MspA1I	CMGCKG	1 cut(s)	1454
MspCI	CTTAAG	1 cut(s)	1543
MspI	CCGG	1 cut(s)	451
MspR9I	CCNGG	5 cut(s)	288, 603, 702, 1010, 1926
MunI	CAATTG	2 cut(s)	750, 957
MvaI	CCWGG	5 cut(s)	288, 603, 702, 1010, 1926
MvnI	CGCG	1 cut(s)	22
NlaIII	CATG	9 cut(s)	86, 548, 676, 1313, 1512, 1517, 1667, 1823, 1854
NlaIV	GGNNCC	5 cut(s)	285, 507, 1338, 1659, 1709
NmuCI	GTSAC	1 cut(s)	578
NsiI	ATGCAT	1 cut(s)	2230
NspI	RCATGY	1 cut(s)	1854
PaeR7I	CTCGAG	1 cut(s)	2289
PagI	TCATGA	1 cut(s)	1663
PaqCI	CACCTGC	1 cut(s)	1517
PciI	ACATGT	1 cut(s)	1850
PciSI	GCTCTTC	1 cut(s)	141
PdmI	GAANNNNTTC	1 cut(s)	2081
PfeI	GAWTC	5 cut(s)	302, 1297, 1349, 1742, 2114
PflMI	CCANNNNNTGG	1 cut(s)	1608
PfoI	TCCNGGA	1 cut(s)	286
PleI	GAGTC	1 cut(s)	1160
PpsI	GAGTC	1 cut(s)	1160
PpuMI	RGGWCCY	2 cut(s)	599, 1707
PscI	ACATGT	1 cut(s)	1850
PshBI	ATTAAT	1 cut(s)	2010
Psp5II	RGGWCCY	2 cut(s)	599, 1707
Psp6I	CCWGG	5 cut(s)	286, 601, 700, 1008, 1924
PspFI	CCCAGC	3 cut(s)	280, 509, 755
PspGI	CCWGG	5 cut(s)	286, 601, 700, 1008, 1924
PspN4I	GGNNCC	5 cut(s)	285, 507, 1338, 1659, 1709
PspPI	GGNCC	4 cut(s)	284, 599, 1707, 2123
PspPPI	RGGWCCY	2 cut(s)	599, 1707
PsrI	GAACNNNNNNTAC	2 cut(s)	1223, 1255
PstI	CTGCAG	1 cut(s)	1996
PstNI	CAGNNNCTG	2 cut(s)	602, 779
PsuI	RGATCY	6 cut(s)	52, 1259, 1336, 1642, 1725, 2026
PvuII	CAGCTG	1 cut(s)	1454
RsaI	GTAC	3 cut(s)	670, 970, 1951
RsaNI	GTAC	3 cut(s)	669, 969, 1950
RseI	CAYNNNNRTG	1 cut(s)	121
SapI	GCTCTTC	1 cut(s)	141
Sau96I	GGNCC	4 cut(s)	284, 599, 1707, 2123
ScaI	AGTACT	1 cut(s)	970
SchI	GAGTC	1 cut(s)	1160
ScrFI	CCNGG	5 cut(s)	288, 603, 702, 1010, 1926
SduI	GDGCHC	2 cut(s)	789, 1464
SexAI	ACCWGGT	1 cut(s)	700
SfcI	CTRYAG	3 cut(s)	1281, 1494, 1992
Sfr274I	CTCGAG	1 cut(s)	2289
SinI	GGWCC	4 cut(s)	284, 599, 1707, 2123
SlaI	CTCGAG	1 cut(s)	2289
SmiMI	CAYNNNNRTG	1 cut(s)	121
SmlI	CTYRAG	3 cut(s)	1481, 1543, 2289
SmoI	CTYRAG	3 cut(s)	1481, 1543, 2289
SsiI	CCGC	3 cut(s)	20, 1721, 2203
SspI	AATATT	2 cut(s)	586, 901
SspMI	CTAG	7 cut(s)	684, 972, 1377, 1670, 1776, 1947, 2063
StyD4I	CCNGG	5 cut(s)	286, 601, 700, 1008, 1924
StyI	CCWWGG	1 cut(s)	981
TaaI	ACNGT	6 cut(s)	8, 405, 463, 517, 578, 1896
TaiI	ACGT	1 cut(s)	697
TaqI	TCGA	2 cut(s)	804, 2290
TatI	WGTACW	2 cut(s)	968, 1949
TfiI	GAWTC	5 cut(s)	302, 1297, 1349, 1742, 2114
TseFI	GTSAC	1 cut(s)	578
Tsp45I	GTSAC	1 cut(s)	578
TspDTI	ATGAA	8 cut(s)	284, 689, 1257, 1331, 1346, 1530, 1734, 1896
TspGWI	ACGGA	1 cut(s)	1877
Van91I	CCANNNNNTGG	1 cut(s)	1608
Vha464I	CTTAAG	1 cut(s)	1543
VpaK11BI	GGWCC	4 cut(s)	284, 599, 1707, 2123
VspI	ATTAAT	1 cut(s)	2010
XapI	RAATTY	4 cut(s)	187, 310, 865, 1876
XbaI	TCTAGA	2 cut(s)	1669, 1775
XceI	RCATGY	1 cut(s)	1854
XcmI	CCANNNNNNNNNTGG	1 cut(s)	120
XhoI	CTCGAG	1 cut(s)	2289
XmiI	GTMKAC	2 cut(s)	532, 1898
XmnI	GAANNNNTTC	1 cut(s)	2081
XspI	CTAG	7 cut(s)	684, 972, 1377, 1670, 1776, 1947, 2063
ZrmI	AGTACT	1 cut(s)	970
Zsp2I	ATGCAT	1 cut(s)	2230

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.