pycom12g15820

Belongs to the mitochondrial carrier (TC 2.A.29) family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
Physical Location & Seq
Reverse (-)
18248106 .. 18251610
3505 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom12g15820.11

Sequence Viewer

Length: 1326 bp
ATGAGTAACGGTGGCTGCCAACATGGGGCCCAAGGTCGCCTCATTTCAGAACATACGTATGAGTCGGAACAAAGTGCGCCTTCCCGTGCACTCTGGTCTCCTCTCTCTCTCTCTCTCTCTGCAACTGCCTCCCTCGCCTTATCCCTTCACTCTTCCACCACCCTTCTTCAAAATTCCCACGCCATGGCCGGAGATTCCAGAGCCATTGTATCATGGCGGAGCATCCCGAGCCTCAACGCCTCCCGCTGCGCCCTCACCGACGCCGCGGACCACCACGAACCGCTGTGGACGACCGCGCAGCTCAGCTTCAGCAGCGGCGGTGGAATTCGGTGCAATTTCGCATGCGTTTCGGTGGCGGAAAGGGGAGAACAAAGGAACGAGTTTTTGCCGACCTCGGCTCAGCTGTTGAAGCATCCTTTGGCTATTCTCGCATGCGTGCCCAAGGACGTTGCGCTATTTGCTGCCGGAGCCGTCGCTGGAGCCGCCGCTAAGAGCGTCACCGCTCCGCTCGACCGCATCAAGATTCTTATGCAGACTCATGGGGTGCGAGTTGGGCAGCAAAGCGGTAAGAAGGCGATCAGTTTTGTCGAGGCCATAACAATGATAGGGAAGGAAGAAGGGATTAAGGGGTACTGGAAGGGCAACCTTCCTCAGGTGATACGGATTATCCCTTATAGTGCTGTTCAGCTTTTTGCTTATGAGGCTTATAAGAAACTCTTTAGGGGCAAAGATGGTGAGCTCTCACTTCTGGGAAGACTTGCGGCGGGTGCTTGTGCGGGCATGACATCCACTTTTGTAACATACCCATTGGATGTCCTGAGGTTGCGCTTAGCAGTTGAACCAGGGTATCGAACCATGTCTGAGATTGCCTTAAACATGCTAAAAGAGGAAGGAGTTGCATCCTTCTACTATGGTCTTGGACCTTCTCTTATTGGAATTGCTCCATATATTGCTGTGAACTTTTGCATTTTTGACTTGGTGAAGAAGTCTTTACCGGAGGATTTTCAAAAGAAAGCTGAAGCATCTCTATTAACAGGTTTGGTGTCAGCTTCCCTTGCCACACTCACTTGTTATCCTTTGGATACTGTCAGAAGACAGATGCAAATGAAGGGCACACCTTACAAGACGGTTTTGGATGCCATTCCAGGTATTGTGGAGCGTGATGGACTTGTAGGTTTATATAGGGGTTTCTTGCCTAATGCTTTGAAAACTTTACCGAACAGCAGCATTAGGCTCACAACTTACGACATGGTCAAGCGTCTCATTGCGACCAGTGAAAAGGAGTTTCAGAGAATTGTGGAGGAAAATCGCAGTAAACACCATTAA

Protein Analysis

442

Amino Acids

47.74

Weight (kDa)

9.2

Isoelectric Point (pI)

33.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0014014)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G51870
fragaria_vesca FvH4_6g11494
malus_domestica MD04G1151500.v1.1 MD12G1165700.v1.1
prunus_persica Prupe.6G276700_v2.0.a1
pyrus_communis pycom04g13750 pycom12g15820
rosa_chinensis RchiOBHm_Chr3g0463201
rosa_laevigata RLG00000024803
rosa_multiflora Rmu_sc0008079.1_g000010 Rmu_sc0022743.1_g000002
rosa_roxburghii Rroxscaffold_6G00416810
rosa_rugosa Rorug03G0062300
rosa_samantha Rh3AG120500 Rh3BG124900 Rh3CG127000
rosa_wichuraiana Rw3G010230

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 708
AccB7I CCANNNNNTGG 1 cut(s) 184
AccBSI CCGCTC 2 cut(s) 503, 508
AccII CGCG 2 cut(s) 266, 296
AcoI YGGCCR 1 cut(s) 186
AcsI RAATTY 2 cut(s) 172, 324
AcuI CTGAAG 2 cut(s) 292, 1038
AcyI GRCGYC 1 cut(s) 261
AfaI GTAC 1 cut(s) 632
AfiI CCNNNNNNNGG 3 cut(s) 25, 184, 652
AgsI TTSAA 5 cut(s) 170, 409, 839, 1007, 1207
AjnI CCWGG 2 cut(s) 841, 1144
AjuI GAANNNNNNNTTGG 2 cut(s) 401, 433
AluBI AGCT 7 cut(s) 301, 306, 403, 688, 739, 1016, 1049
AluI AGCT 7 cut(s) 301, 306, 403, 688, 739, 1016, 1049
Alw21I GWGCWC 2 cut(s) 91, 741
Alw26I GTCTC 2 cut(s) 102, 1265
Alw44I GTGCAC 1 cut(s) 87
Ama87I CYCGRG 1 cut(s) 226
AoxI GGCC 3 cut(s) 27, 186, 591
ApaI GGGCCC 1 cut(s) 31
ApaLI GTGCAC 1 cut(s) 87
ApeKI GCWGC 7 cut(s) 15, 246, 298, 312, 461, 556, 1224
ApoI RAATTY 2 cut(s) 172, 324
AspLEI GCGC 5 cut(s) 79, 251, 298, 454, 828
AspS9I GGNCC 4 cut(s) 27, 28, 268, 920
AsuHPI GGTGA 5 cut(s) 247, 490, 667, 746, 991
AvaI CYCGRG 1 cut(s) 226
AvaII GGWCC 2 cut(s) 268, 920
AxyI CCTNAGG 2 cut(s) 651, 818
BaeGI GKGCMC 4 cut(s) 31, 91, 441, 1115
BaeI ACNNNNGTAYC 2 cut(s) 830, 863
BanII GRGCYC 2 cut(s) 31, 741
BbsI GAAGAC 2 cut(s) 760, 1099
Bbv12I GWGCWC 2 cut(s) 91, 741
BbvI GCAGC 7 cut(s) 2, 233, 310, 324, 448, 568, 1236
BccI CCATC 2 cut(s) 725, 1157
BceAI ACGGC 1 cut(s) 455
BcgI CGANNNNNNTGC 2 cut(s) 330, 364
BciT130I CCWGG 2 cut(s) 843, 1146
BciVI GTATCC 1 cut(s) 1075
BcoDI GTCTC 2 cut(s) 102, 1265
BfuI GTATCC 1 cut(s) 1075
BlpI GCTNAGC 3 cut(s) 302, 399, 829
Bme1390I CCNGG 2 cut(s) 843, 1146
Bme18I GGWCC 2 cut(s) 268, 920
BmeT110I CYCGRG 1 cut(s) 226
BmgT120I GGNCC 4 cut(s) 27, 28, 268, 920
BmiI GGNNCC 4 cut(s) 28, 29, 469, 481
BmrFI CCNGG 2 cut(s) 843, 1146
BmsI GCATC 7 cut(s) 231, 421, 525, 908, 1031, 1089, 1126
BpiI GAAGAC 2 cut(s) 760, 1099
BpmI CTGGAG 1 cut(s) 498
Bpu1102I GCTNAGC 3 cut(s) 302, 399, 829
BsaAI YACGTR 1 cut(s) 57
BsaHI GRCGYC 1 cut(s) 261
BsaI GGTCTC 1 cut(s) 102
BsaJI CCNNGG 6 cut(s) 31, 183, 264, 393, 441, 842
BsaWI WCCGGW 1 cut(s) 994
Bsc4I CCNNNNNNNGG 3 cut(s) 25, 184, 652
Bse1I ACTGG 2 cut(s) 638, 1272
Bse21I CCTNAGG 2 cut(s) 651, 818
Bse3DI GCAATG 1 cut(s) 1263
BseBI CCWGG 2 cut(s) 843, 1146
BseDI CCNNGG 6 cut(s) 31, 183, 264, 393, 441, 842
BseGI GGATG 6 cut(s) 222, 412, 785, 817, 899, 1141
BseLI CCNNNNNNNGG 3 cut(s) 25, 184, 652
BseMI GCAATG 1 cut(s) 1263
BseMII CTCAG 5 cut(s) 316, 413, 665, 809, 852
BseNI ACTGG 2 cut(s) 638, 1272
BseRI GAGGAG 1 cut(s) 90
BseSI GKGCMC 4 cut(s) 31, 91, 441, 1115
BseXI GCAGC 7 cut(s) 2, 233, 310, 324, 448, 568, 1236
Bsh1236I CGCG 2 cut(s) 266, 296
Bsh1285I CGRYCG 2 cut(s) 294, 514
BshFI GGCC 3 cut(s) 29, 188, 593
BsiEI CGRYCG 2 cut(s) 294, 514
BsiHKAI GWGCWC 2 cut(s) 91, 741
BsiHKCI CYCGRG 1 cut(s) 226
BsiSI CCGG 3 cut(s) 189, 465, 995
BslI CCNNNNNNNGG 3 cut(s) 25, 184, 652
BsmAI GTCTC 2 cut(s) 102, 1265
BsmBI CGTCTC 1 cut(s) 1265
BsnI GGCC 3 cut(s) 29, 188, 593
Bso31I GGTCTC 1 cut(s) 102
BsoBI CYCGRG 1 cut(s) 226
Bsp120I GGGCCC 1 cut(s) 27
Bsp1286I GDGCHC 5 cut(s) 31, 91, 441, 741, 1115
Bsp143I GATC 1 cut(s) 576
Bsp1720I GCTNAGC 3 cut(s) 302, 399, 829
Bsp19I CCATGG 1 cut(s) 183
BspANI GGCC 3 cut(s) 29, 188, 593
BspCNI CTCAG 5 cut(s) 315, 412, 664, 810, 853
BspFNI CGCG 2 cut(s) 266, 296
BspLI GGNNCC 4 cut(s) 28, 29, 469, 481
BspTNI GGTCTC 1 cut(s) 102
BsrBI CCGCTC 2 cut(s) 503, 508
BsrDI GCAATG 1 cut(s) 1263
BsrI ACTGG 2 cut(s) 638, 1272
BssECI CCNNGG 6 cut(s) 31, 183, 264, 393, 441, 842
BssMI GATC 1 cut(s) 576
BssNI GRCGYC 1 cut(s) 261
BssT1I CCWWGG 3 cut(s) 31, 183, 441
Bst2UI CCWGG 2 cut(s) 843, 1146
Bst4CI ACNGT 3 cut(s) 11, 1087, 1129
Bst6I CTCTTC 1 cut(s) 157
BstACI GRCGYC 1 cut(s) 261
BstBAI YACGTR 1 cut(s) 57
BstC8I GCNNGC 4 cut(s) 343, 433, 437, 778
BstDEI CTNAG 7 cut(s) 302, 399, 489, 651, 818, 829, 861
BstDSI CCRYGG 2 cut(s) 183, 264
BstENI CCTNNNNNAGG 1 cut(s) 650
BstF5I GGATG 6 cut(s) 222, 412, 785, 817, 899, 1141
BstFNI CGCG 2 cut(s) 266, 296
BstHHI GCGC 5 cut(s) 79, 251, 298, 454, 828
BstKTI GATC 1 cut(s) 579
BstMAI GTCTC 2 cut(s) 102, 1265
BstMBI GATC 1 cut(s) 576
BstMCI CGRYCG 2 cut(s) 294, 514
BstNI CCWGG 2 cut(s) 843, 1146
BstNSI RCATGY 3 cut(s) 345, 435, 880
BstSCI CCNGG 2 cut(s) 841, 1144
BstSLI GKGCMC 4 cut(s) 31, 91, 441, 1115
BstSNI TACGTA 1 cut(s) 57
BstUI CGCG 2 cut(s) 266, 296
BstV1I GCAGC 7 cut(s) 2, 233, 310, 324, 448, 568, 1236
BstV2I GAAGAC 2 cut(s) 760, 1099
Bsu36I CCTNAGG 2 cut(s) 651, 818
BsuI GTATCC 1 cut(s) 1075
BsuRI GGCC 3 cut(s) 29, 188, 593
BtgI CCRYGG 2 cut(s) 183, 264
BtsCI GGATG 6 cut(s) 222, 412, 785, 817, 899, 1141
BtsIMutI CAGTG 1 cut(s) 1279
Cac8I GCNNGC 4 cut(s) 343, 433, 437, 778
CfoI GCGC 5 cut(s) 79, 251, 298, 454, 828
Cfr13I GGNCC 4 cut(s) 27, 28, 268, 920
Cfr42I CCGCGG 1 cut(s) 267
CseI GACGC 3 cut(s) 269, 484, 1247
Csp6I GTAC 1 cut(s) 631
CviQI GTAC 1 cut(s) 631
DdeI CTNAG 7 cut(s) 302, 399, 489, 651, 818, 829, 861
DpnI GATC 1 cut(s) 578
DpnII GATC 1 cut(s) 576
EaeI YGGCCR 1 cut(s) 186
Eam1104I CTCTTC 1 cut(s) 157
EarI CTCTTC 1 cut(s) 157
EciI GGCGGA 2 cut(s) 232, 371
Ecl136II GAGCTC 1 cut(s) 739
Eco105I TACGTA 1 cut(s) 57
Eco130I CCWWGG 3 cut(s) 31, 183, 441
Eco24I GRGCYC 2 cut(s) 31, 741
Eco31I GGTCTC 1 cut(s) 102
Eco47I GGWCC 2 cut(s) 268, 920
Eco53kI GAGCTC 1 cut(s) 739
Eco57I CTGAAG 2 cut(s) 292, 1038
Eco81I CCTNAGG 2 cut(s) 651, 818
Eco88I CYCGRG 1 cut(s) 226
EcoICRI GAGCTC 1 cut(s) 739
EcoNI CCTNNNNNAGG 1 cut(s) 650
EcoO109I RGGNCCY 1 cut(s) 27
EcoRI GAATTC 1 cut(s) 324
EcoRII CCWGG 2 cut(s) 841, 1144
EcoT14I CCWWGG 3 cut(s) 31, 183, 441
EcoT38I GRGCYC 2 cut(s) 31, 741
ErhI CCWWGG 3 cut(s) 31, 183, 441
Esp3I CGTCTC 1 cut(s) 1265
FalI AAGNNNNNCTT 4 cut(s) 64, 96, 701, 733
FauI CCCGC 3 cut(s) 251, 757, 769
FokI GGATG 6 cut(s) 209, 399, 772, 824, 886, 1148
FriOI GRGCYC 2 cut(s) 31, 741
GlaI GCGC 5 cut(s) 78, 250, 297, 453, 827
GsuI CTGGAG 1 cut(s) 498
HaeIII GGCC 3 cut(s) 29, 188, 593
HapII CCGG 3 cut(s) 189, 465, 995
HgaI GACGC 3 cut(s) 269, 484, 1247
HhaI GCGC 5 cut(s) 79, 251, 298, 454, 828
Hin1I GRCGYC 1 cut(s) 261
Hin6I GCGC 5 cut(s) 77, 249, 296, 452, 826
HinP1I GCGC 5 cut(s) 77, 249, 296, 452, 826
HinfI GANTC 4 cut(s) 62, 194, 523, 535
HpaII CCGG 3 cut(s) 189, 465, 995
HphI GGTGA 5 cut(s) 247, 490, 667, 746, 991
Hpy166II GTNNAC 4 cut(s) 89, 288, 958, 1316
Hpy188I TCNGA 5 cut(s) 49, 67, 862, 1091, 1290
Hpy188III TCNNGA 4 cut(s) 198, 226, 520, 817
Hpy8I GTNNAC 4 cut(s) 89, 288, 958, 1316
Hpy99I CGWCG 2 cut(s) 263, 476
HpyCH4III ACNGT 3 cut(s) 11, 1087, 1129
HpyCH4IV ACGT 2 cut(s) 56, 447
HpyCH4V TGCA 7 cut(s) 89, 122, 333, 532, 899, 966, 1102
HpyF3I CTNAG 7 cut(s) 302, 399, 489, 651, 818, 829, 861
HpySE526I ACGT 2 cut(s) 56, 447
Hsp92I GRCGYC 1 cut(s) 261
HspAI GCGC 5 cut(s) 77, 249, 296, 452, 826
KspI CCGCGG 1 cut(s) 267
Kzo9I GATC 1 cut(s) 576
LmnI GCTCC 6 cut(s) 219, 467, 479, 508, 946, 1156
Lsp1109I GCAGC 7 cut(s) 2, 233, 310, 324, 448, 568, 1236
LweI GCATC 7 cut(s) 231, 421, 525, 908, 1031, 1089, 1126
MaeII ACGT 2 cut(s) 56, 447
MaeIII GTNAC 3 cut(s) 5, 496, 796
MalI GATC 1 cut(s) 578
MbiI CCGCTC 2 cut(s) 503, 508
MboI GATC 1 cut(s) 576
MboII GAAGA 6 cut(s) 144, 158, 626, 765, 994, 1104
MhlI GDGCHC 5 cut(s) 31, 91, 441, 741, 1115
MluCI AATT 5 cut(s) 172, 324, 334, 936, 1293
MlyI GAGTC 2 cut(s) 71, 529
MmeI TCCRAC 1 cut(s) 45
MseI TTAA 4 cut(s) 624, 872, 1031, 1324
MslI CAYNNNNRTG 2 cut(s) 57, 599
MspA1I CMGCKG 5 cut(s) 246, 266, 283, 315, 403
MspI CCGG 3 cut(s) 189, 465, 995
MspR9I CCNGG 2 cut(s) 843, 1146
MvaI CCWGG 2 cut(s) 843, 1146
MvnI CGCG 2 cut(s) 266, 296
NcoI CCATGG 1 cut(s) 183
NdeII GATC 1 cut(s) 576
NlaIV GGNNCC 4 cut(s) 28, 29, 469, 481
NmeAIII GCCGAG 1 cut(s) 374
NmuCI GTSAC 1 cut(s) 496
NspI RCATGY 3 cut(s) 345, 435, 880
PaeI GCATGC 2 cut(s) 345, 435
PfeI GAWTC 2 cut(s) 194, 523
PflFI GACNNNGTC 1 cut(s) 1250
PflMI CCANNNNNTGG 1 cut(s) 184
PleI GAGTC 2 cut(s) 70, 529
PpsI GAGTC 2 cut(s) 70, 529
Ppu21I YACGTR 1 cut(s) 57
PsiI TTATAA 1 cut(s) 708
Psp124BI GAGCTC 1 cut(s) 741
Psp6I CCWGG 2 cut(s) 841, 1144
PspGI CCWGG 2 cut(s) 841, 1144
PspN4I GGNNCC 4 cut(s) 28, 29, 469, 481
PspOMI GGGCCC 1 cut(s) 27
PspPI GGNCC 4 cut(s) 27, 28, 268, 920
PsyI GACNNNGTC 1 cut(s) 1250
PvuII CAGCTG 1 cut(s) 403
RsaI GTAC 1 cut(s) 632
RsaNI GTAC 1 cut(s) 631
RseI CAYNNNNRTG 2 cut(s) 57, 599
SacI GAGCTC 1 cut(s) 741
SacII CCGCGG 1 cut(s) 267
SaqAI TTAA 4 cut(s) 624, 872, 1031, 1324
Sau3AI GATC 1 cut(s) 576
Sau96I GGNCC 4 cut(s) 27, 28, 268, 920
SchI GAGTC 2 cut(s) 71, 529
ScrFI CCNGG 2 cut(s) 843, 1146
SduI GDGCHC 5 cut(s) 31, 91, 441, 741, 1115
SfaNI GCATC 7 cut(s) 231, 421, 525, 908, 1031, 1089, 1126
Sfr303I CCGCGG 1 cut(s) 267
SgrBI CCGCGG 1 cut(s) 267
SinI GGWCC 2 cut(s) 268, 920
SmiMI CAYNNNNRTG 2 cut(s) 57, 599
SnaBI TACGTA 1 cut(s) 57
SphI GCATGC 2 cut(s) 345, 435
Sse9I AATT 5 cut(s) 172, 324, 334, 936, 1293
SstI GAGCTC 1 cut(s) 741
StyD4I CCNGG 2 cut(s) 841, 1144
StyI CCWWGG 3 cut(s) 31, 183, 441
TaaI ACNGT 3 cut(s) 11, 1087, 1129
TaiI ACGT 2 cut(s) 59, 450
TaqI TCGA 3 cut(s) 510, 588, 850
TasI AATT 5 cut(s) 172, 324, 334, 936, 1293
TauI GCSGC 5 cut(s) 266, 318, 485, 488, 764
TfiI GAWTC 2 cut(s) 194, 523
Tru1I TTAA 4 cut(s) 624, 872, 1031, 1324
Tru9I TTAA 4 cut(s) 624, 872, 1031, 1324
TscAI CASTG 1 cut(s) 1279
TseFI GTSAC 1 cut(s) 496
TseI GCWGC 7 cut(s) 15, 246, 298, 312, 461, 556, 1224
Tsp45I GTSAC 1 cut(s) 496
TspDTI ATGAA 1 cut(s) 1121
TspGWI ACGGA 1 cut(s) 676
TspRI CASTG 1 cut(s) 1279
Tth111I GACNNNGTC 1 cut(s) 1250
Van91I CCANNNNNTGG 1 cut(s) 184
VneI GTGCAC 1 cut(s) 87
VpaK11BI GGWCC 2 cut(s) 268, 920
XagI CCTNNNNNAGG 1 cut(s) 650
XapI RAATTY 2 cut(s) 172, 324
XceI RCATGY 3 cut(s) 345, 435, 880
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.