pycom12g20860

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
Physical Location & Seq
Forward (+)
22199749 .. 22200069
321 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom12g20860.1

Sequence Viewer

Length: 213 bp
ATGGTTGATCCAGTTCTTCAGGGGCAATTCTCACAGCGGGATCTAATTCAGATAGCAGCTATTGCAGCAATGTGTGTGCAGCCAGAAGCTGAATATCGGCCTCTAATGACGGATGTCGTACCATCTCTAATTCCACTGGTTAGAAACTCCTGTTATGGTGCTTCCTCTGGTTCGTCTAGGTTTCTGAATCAAACACCAAGTCCAAGGTATTAG

Protein Analysis

71

Amino Acids

7.69

Weight (kDa)

6.0

Isoelectric Point (pI)

44.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0020445)

Species Orthologous Gene IDs
pyrus_communis pycom12g20860
rosa_multiflora Rmu_co8356951.1_g000001
rosa_roxburghii Rroxscaffold_1G00042670
rosa_samantha Rh3AG141900 Rh3CG163400 Rh5BG263200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 37
AclWI GGATC 2 cut(s) 2, 48
AfaI GTAC 1 cut(s) 120
AluBI AGCT 2 cut(s) 59, 89
AluI AGCT 2 cut(s) 59, 89
AlwI GGATC 2 cut(s) 2, 48
AlwNI CAGNNNCTG 1 cut(s) 89
AoxI GGCC 1 cut(s) 98
ApeKI GCWGC 3 cut(s) 56, 65, 79
ArsI GACNNNNNNTTYG 1 cut(s) 184
BbvI GCAGC 3 cut(s) 68, 77, 91
BccI CCATC 1 cut(s) 130
BfaI CTAG 1 cut(s) 177
BisI GCNGC 3 cut(s) 57, 66, 80
BlsI GCNGC 3 cut(s) 58, 67, 81
BoxI GACNNNNGTC 1 cut(s) 113
BsaJI CCNNGG 1 cut(s) 203
Bse1I ACTGG 2 cut(s) 11, 141
Bse3DI GCAATG 1 cut(s) 75
BseDI CCNNGG 1 cut(s) 203
BseGI GGATG 1 cut(s) 118
BseMI GCAATG 1 cut(s) 75
BseNI ACTGG 2 cut(s) 11, 141
BseXI GCAGC 3 cut(s) 68, 77, 91
BsgI GTGCAG 1 cut(s) 98
BshFI GGCC 1 cut(s) 100
BsnI GGCC 1 cut(s) 100
Bsp143I GATC 2 cut(s) 7, 40
BspACI CCGC 1 cut(s) 37
BspANI GGCC 1 cut(s) 100
BspPI GGATC 2 cut(s) 2, 48
BsrDI GCAATG 1 cut(s) 75
BsrI ACTGG 2 cut(s) 11, 141
BssECI CCNNGG 1 cut(s) 203
BssMI GATC 2 cut(s) 7, 40
BssT1I CCWWGG 1 cut(s) 203
BstAPI GCANNNNNTGC 1 cut(s) 62
BstF5I GGATG 1 cut(s) 118
BstKTI GATC 2 cut(s) 10, 43
BstMBI GATC 2 cut(s) 7, 40
BstMWI GCNNNNNNNGC 2 cut(s) 62, 65
BstPAI GACNNNNGTC 1 cut(s) 113
BstV1I GCAGC 3 cut(s) 68, 77, 91
BstX2I RGATCY 1 cut(s) 40
BstYI RGATCY 1 cut(s) 40
BsuRI GGCC 1 cut(s) 100
BtsCI GGATG 1 cut(s) 118
BtsIMutI CAGTG 1 cut(s) 134
CaiI CAGNNNCTG 1 cut(s) 89
Csp6I GTAC 1 cut(s) 119
CviJI RGCY 4 cut(s) 59, 82, 89, 100
CviKI_1 RGCY 4 cut(s) 59, 82, 89, 100
CviQI GTAC 1 cut(s) 119
DpnI GATC 2 cut(s) 9, 42
DpnII GATC 2 cut(s) 7, 40
Eco130I CCWWGG 1 cut(s) 203
EcoT14I CCWWGG 1 cut(s) 203
ErhI CCWWGG 1 cut(s) 203
FaiI YATR 1 cut(s) 156
FauI CCCGC 1 cut(s) 30
Fnu4HI GCNGC 3 cut(s) 57, 66, 80
FokI GGATG 1 cut(s) 125
Fsp4HI GCNGC 3 cut(s) 57, 66, 80
FspBI CTAG 1 cut(s) 177
GluI GCNGC 3 cut(s) 57, 66, 80
HaeIII GGCC 1 cut(s) 100
HinfI GANTC 1 cut(s) 187
Hpy188I TCNGA 2 cut(s) 51, 186
HpyCH4V TGCA 2 cut(s) 65, 79
HpyF10VI GCNNNNNNNGC 2 cut(s) 62, 65
Kzo9I GATC 2 cut(s) 7, 40
LpnPI CCDG 6 cut(s) 5, 24, 96, 122, 153, 163
Lsp1109I GCAGC 3 cut(s) 68, 77, 91
MaeI CTAG 1 cut(s) 177
MalI GATC 2 cut(s) 9, 42
MboI GATC 2 cut(s) 7, 40
MboII GAAGA 1 cut(s) 8
MflI RGATCY 1 cut(s) 40
MluCI AATT 3 cut(s) 26, 45, 129
MnlI CCTC 2 cut(s) 111, 175
MspA1I CMGCKG 1 cut(s) 37
MwoI GCNNNNNNNGC 2 cut(s) 62, 65
NdeII GATC 2 cut(s) 7, 40
PfeI GAWTC 1 cut(s) 187
PkrI GCNGC 3 cut(s) 58, 67, 81
PshAI GACNNNNGTC 1 cut(s) 113
PstNI CAGNNNCTG 1 cut(s) 89
PsuI RGATCY 1 cut(s) 40
RsaI GTAC 1 cut(s) 120
RsaNI GTAC 1 cut(s) 119
SatI GCNGC 3 cut(s) 57, 66, 80
Sau3AI GATC 2 cut(s) 7, 40
SetI ASST 4 cut(s) 61, 91, 182, 209
SgeI CNNG 8 cut(s) 23, 32, 50, 95, 149, 162, 180, 189
Sse9I AATT 3 cut(s) 26, 45, 129
SsiI CCGC 1 cut(s) 37
SspMI CTAG 1 cut(s) 177
StyI CCWWGG 1 cut(s) 203
TasI AATT 3 cut(s) 26, 45, 129
TfiI GAWTC 1 cut(s) 187
TscAI CASTG 1 cut(s) 141
TseI GCWGC 3 cut(s) 56, 65, 79
TspGWI ACGGA 1 cut(s) 125
TspRI CASTG 1 cut(s) 141
XspI CTAG 1 cut(s) 177
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.