Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr12

Orthogroup ID

OG0015641

Physical Location & Seq

Genomic Coordinates Reverse (-)

23989199 .. 23992297

Gene Structure 3099 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom12g23380.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1794 bp

ATGACAGCAAGAAACTTTTCTTACAAGCTTAACATCTTACTCGTTGTCGCTTATTTTATTTTAACTTTTGCAGATGATTTATCTTCACCAGATGATCACTCAGGAGGCTGTGTGTTAAACTTCACATCCATTCCATTCCAACCAACTGGGGAGTGCCTCTCTCACGTAGGACATAAAATAAACGTTTGGGGAAGCTACAGCACAAGCCCGTGCTGTCAAAAAGTCCTCACCACCATGTCCGAAGCCTTAGCCATTCACGCAGTCAAGACTCAGGGCAGTGCCAGTGTCTTTCTTCCAGAACAAGAATGGAAAAACTGCAGCGGGCCTTTTCAGAAGGAGCGAGACGTGTCTGCAAAAAACTGTCATTTTGATGGCCTTTACTATGGTAGCAGCGCGTGCTCGAACACAACTCTTGCATCCATCAAGAAAGAGCAGGCCTTCCAAAACGCGATAAGTAATTGCTCAAACCTTAGCAATGCATTTGAGGATGTTTGCGGCAATTGCAGCAAGGCGGTATTAGGCTTGAGGGACGATTTGCTGAATGCATATAAAGTGAAGGATGGGAACGCAACTGAGACGGGCATATGTGGTATAGCAGCTGTTATTTCTGTTTTAGAAGAGAAGATGAACAATACCTTTTCAATCGACAATGACTTTATGTTGTGTATGTCTTTTTTAGACACCTTCGAACCAGGCTACATCAAAATCAAATATTCTTTGGCAGAAGCGATACTTTCCATCTTAATAGGCATCACCGCTGTGACACTGATCATCCTGCTGATAAAATTTGTTACCAAGAAGCAGCCTCAAAAACCAGTTCGCTCGGGACCGATTACTACATGGTCTGGCCTGTACAGGTTCTCCAAGGCCGAGATTGAGAATGCCATTAATACTGAAAGAAAGGACCTTGGACGAGGAAGCGCTGGTCAAGTTTATAAAGGGGTTCTTCCGAGCGGGCAAGTTGTTGCCATTAAGCACATTAACAAGAGTAACACATCCGATTCATTTACTAGAGAAGTGGAAGGCCTTTCGAGGGTTCGACATCCAAACTTGGTTTGCCTCTTTGGTTGCTGCGTCGAAGATGGCGAACAATATCTTGTGTATGAATATTGCGCTAAAGGGAATCTAGCTAAACACCTCCTAAGAAACGATCCTGTCTTAACATGGGAAAGAAGAGTTAGGATTCTAAGAGATTGTGCACTTGCTTTGAGATATCTCCACCATTATATTGATGGATGCATTGTTCATAGAGATATTAAGCTTACAAACATCCTTTTGACGGATAACTTGGAACCCAAGCTATCTGATTTCGGGCTGGCAAAGATGTTGGGTATGGAGGAGAGCAAAGTATTTACAGATGTTAGAGGAACCATAGGCTACATGGATCCAGAGTACATGACCAATGCCAAGTTAACCTGCGCGAGTGATGTCTACAGTTTCGGCATTGTTGCTCTGCAACTGCTATCGGGGCAAAAAGTATTTGAGCTGGATCTTGATGCTAGAGACCAACTAACAAGAAAGGCAAAGGATATAAGTATGAACAAACGCCCTCCTGAGGATCTTGAGGACCCAAGACTGAATGGAAATGTGAACAAGGCGGACTTTGAATCGATCCTTCAAGTTGCAGTACTTTGCGTTGCCAAATCAAGCAAAGGCCGCCCTACGATCGATCTTGTTTTCGAAGAGATGGACAAGGCTTGGAAGAACACTCTTGCTGACATGAAGGCAAGGAATAAAGGGATAAGTTCATCAGCGACACCACTGTCTATGTCTTCCGATGTGTTTTCAGTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase

Protein Analysis

598

Amino Acids

65.99

Weight (kDa)

6.82

Isoelectric Point (pI)

36.0

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015641)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g01140
malus_domestica	MD04G1236100.v1.1 MD12G1255100.v1.1
prunus_persica	Prupe.6G356000_v2.0.a1
pyrus_communis	pycom04g20980 pycom12g23380
rosa_chinensis	RchiOBHm_Chr3g0448671
rosa_laevigata	RLG00000025880
rosa_multiflora	Rmu_sc0003116.1_g000033
rosa_roxburghii	Rroxscaffold_6G00426940
rosa_rugosa	Rorug02G0615200
rosa_samantha	Rh3AG014000 Rh3BG013800 Rh3CG012900 Rh3DG014600
rosa_wichuraiana	Rw3G001040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	936
AasI	GACNNNNNNGTC	1 cut(s)	1762
Acc36I	ACCTGC	1 cut(s)	1424
AccBSI	CCGCTC	1 cut(s)	954
AccI	GTMKAC	1 cut(s)	1431
AccII	CGCG	3 cut(s)	395, 449, 1421
AciI	CCGC	7 cut(s)	321, 495, 512, 756, 954, 1598, 1657
AclI	AACGTT	1 cut(s)	183
AclWI	GGATC	6 cut(s)	1145, 1379, 1392, 1497, 1566, 1606
AcsI	RAATTY	1 cut(s)	785
AfaI	GTAC	3 cut(s)	854, 1394, 1629
AfeI	AGCGCT	1 cut(s)	922
AfiI	CCNNNNNNNGG	3 cut(s)	1033, 1279, 1555
AflIII	ACRYGT	1 cut(s)	345
AgsI	TTSAA	3 cut(s)	642, 1607, 1619
AjiI	CACGTC	1 cut(s)	346
AjnI	CCWGG	1 cut(s)	691
AleI	CACNNNNGTG	1 cut(s)	758
AloI	GAACNNNNNNTCC	2 cut(s)	1227, 1259
AluBI	AGCT	7 cut(s)	28, 195, 599, 1130, 1261, 1300, 1486
AluI	AGCT	7 cut(s)	28, 195, 599, 1130, 1261, 1300, 1486
Alw21I	GWGCWC	2 cut(s)	401, 1201
Alw26I	GTCTC	3 cut(s)	336, 569, 1497
Alw44I	GTGCAC	1 cut(s)	1197
AlwI	GGATC	6 cut(s)	1145, 1379, 1392, 1497, 1566, 1606
Ama87I	CYCGRG	1 cut(s)	823
Aor51HI	AGCGCT	1 cut(s)	922
AoxI	GGCC	7 cut(s)	323, 373, 435, 847, 867, 1024, 1654
ApaLI	GTGCAC	1 cut(s)	1197
ApeKI	GCWGC	6 cut(s)	318, 390, 504, 596, 802, 1071
ApoI	RAATTY	1 cut(s)	785
AseI	ATTAAT	1 cut(s)	888
Asp700I	GAANNNNTTC	1 cut(s)	16
AspLEI	GCGC	4 cut(s)	395, 923, 1115, 1421
AspS9I	GGNCC	4 cut(s)	323, 827, 904, 1567
AsuHPI	GGTGA	3 cut(s)	78, 220, 745
AsuII	TTCGAA	2 cut(s)	687, 1680
AvaI	CYCGRG	1 cut(s)	823
AvaII	GGWCC	3 cut(s)	827, 904, 1567
AxyI	CCTNAGG	1 cut(s)	1554
BaeGI	GKGCMC	1 cut(s)	1201
BamHI	GGATCC	1 cut(s)	1384
BbsI	GAAGAC	1 cut(s)	1764
Bbv12I	GWGCWC	2 cut(s)	401, 1201
BbvI	GCAGC	6 cut(s)	330, 402, 516, 608, 814, 1058
BccI	CCATC	7 cut(s)	365, 428, 554, 746, 1076, 1226, 1681
BciT130I	CCWGG	1 cut(s)	693
BclI	TGATCA	2 cut(s)	94, 768
BcoDI	GTCTC	3 cut(s)	336, 569, 1497
BfaI	CTAG	3 cut(s)	1011, 1127, 1500
BfmI	CTRYAG	3 cut(s)	196, 316, 1432
BfoI	RGCGCY	1 cut(s)	924
BfuAI	ACCTGC	1 cut(s)	1424
BisI	GCNGC	8 cut(s)	319, 391, 496, 505, 597, 803, 1072, 1657
BlsI	GCNGC	8 cut(s)	320, 392, 497, 506, 598, 804, 1073, 1658
BmcAI	AGTACT	1 cut(s)	1629
Bme1390I	CCNGG	1 cut(s)	693
Bme18I	GGWCC	3 cut(s)	827, 904, 1567
BmeT110I	CYCGRG	1 cut(s)	823
BmgBI	CACGTC	1 cut(s)	346
BmgT120I	GGNCC	4 cut(s)	323, 827, 904, 1567
BmiI	GGNNCC	5 cut(s)	828, 1293, 1369, 1386, 1569
BmrFI	CCNGG	1 cut(s)	693
BmrI	ACTGGG	1 cut(s)	156
BmsI	GCATC	4 cut(s)	425, 759, 1226, 1486
BmuI	ACTGGG	1 cut(s)	156
BpiI	GAAGAC	1 cut(s)	1764
BplI	GAGNNNNNCTC	2 cut(s)	143, 175
Bpu10I	CCTNAGC	2 cut(s)	247, 470
Bpu14I	TTCGAA	2 cut(s)	687, 1680
BpuEI	CTTGAG	2 cut(s)	544, 1583
Bsa29I	ATCGAT	2 cut(s)	1610, 1668
BsaAI	YACGTR	1 cut(s)	166
BsaI	GGTCTC	1 cut(s)	1497
BsaJI	CCNNGG	2 cut(s)	864, 907
BsaXI	ACNNNNNCTCC	4 cut(s)	96, 126, 845, 875
Bsc4I	CCNNNNNNNGG	3 cut(s)	1033, 1279, 1555
Bse1I	ACTGG	3 cut(s)	151, 282, 815
Bse21I	CCTNAGG	1 cut(s)	1554
Bse3DI	GCAATG	1 cut(s)	481
BseBI	CCWGG	1 cut(s)	693
BseCI	ATCGAT	2 cut(s)	1610, 1668
BseDI	CCNNGG	2 cut(s)	864, 907
BseGI	GGATG	9 cut(s)	125, 416, 493, 565, 771, 995, 1042, 1241, 1269
BseLI	CCNNNNNNNGG	3 cut(s)	1033, 1279, 1555
BseMI	GCAATG	1 cut(s)	481
BseMII	CTCAG	4 cut(s)	114, 284, 564, 1545
BseNI	ACTGG	3 cut(s)	151, 282, 815
BseRI	GAGGAG	1 cut(s)	1352
BseSI	GKGCMC	1 cut(s)	1201
BseXI	GCAGC	6 cut(s)	330, 402, 516, 608, 814, 1058
Bsh1236I	CGCG	3 cut(s)	395, 449, 1421
Bsh1285I	CGRYCG	1 cut(s)	1668
BshFI	GGCC	7 cut(s)	325, 375, 437, 849, 869, 1026, 1656
BshVI	ATCGAT	2 cut(s)	1610, 1668
BsiEI	CGRYCG	1 cut(s)	1668
BsiHKAI	GWGCWC	2 cut(s)	401, 1201
BsiHKCI	CYCGRG	1 cut(s)	823
BslFI	GGGAC	2 cut(s)	542, 840
BslI	CCNNNNNNNGG	3 cut(s)	1033, 1279, 1555
BsmAI	GTCTC	3 cut(s)	336, 569, 1497
BsmBI	CGTCTC	2 cut(s)	336, 569
BsmFI	GGGAC	2 cut(s)	542, 840
BsmI	GAATGC	2 cut(s)	547, 886
BsnI	GGCC	7 cut(s)	325, 375, 437, 849, 869, 1026, 1656
Bso31I	GGTCTC	1 cut(s)	1497
BsoBI	CYCGRG	1 cut(s)	823
Bsp119I	TTCGAA	2 cut(s)	687, 1680
Bsp1286I	GDGCHC	2 cut(s)	401, 1201
Bsp1407I	TGTACA	1 cut(s)	852
Bsp143I	GATC	9 cut(s)	94, 768, 1150, 1384, 1489, 1558, 1611, 1665, 1669
BspACI	CCGC	7 cut(s)	321, 495, 512, 756, 954, 1598, 1657
BspANI	GGCC	7 cut(s)	325, 375, 437, 849, 869, 1026, 1656
BspCNI	CTCAG	4 cut(s)	113, 283, 565, 1546
BspDI	ATCGAT	2 cut(s)	1610, 1668
BspFNI	CGCG	3 cut(s)	395, 449, 1421
BspLI	GGNNCC	5 cut(s)	828, 1293, 1369, 1386, 1569
BspMAI	CTGCAG	1 cut(s)	320
BspMI	ACCTGC	1 cut(s)	1424
BspPI	GGATC	6 cut(s)	1145, 1379, 1392, 1497, 1566, 1606
BspT104I	TTCGAA	2 cut(s)	687, 1680
BspTNI	GGTCTC	1 cut(s)	1497
BsrBI	CCGCTC	1 cut(s)	954
BsrDI	GCAATG	1 cut(s)	481
BsrGI	TGTACA	1 cut(s)	852
BsrI	ACTGG	3 cut(s)	151, 282, 815
BssECI	CCNNGG	2 cut(s)	864, 907
BssMI	GATC	9 cut(s)	94, 768, 1150, 1384, 1489, 1558, 1611, 1665, 1669
BssT1I	CCWWGG	2 cut(s)	864, 907
Bst2UI	CCWGG	1 cut(s)	693
Bst4CI	ACNGT	3 cut(s)	362, 1436, 1764
Bst6I	CTCTTC	3 cut(s)	612, 1168, 1677
BstAPI	GCANNNNNTGC	1 cut(s)	396
BstAUI	TGTACA	1 cut(s)	852
BstBAI	YACGTR	1 cut(s)	166
BstBI	TTCGAA	2 cut(s)	687, 1680
BstC8I	GCNNGC	5 cut(s)	323, 397, 435, 956, 1317
BstDEI	CTNAG	8 cut(s)	100, 247, 270, 470, 573, 1142, 1187, 1554
BstF5I	GGATG	9 cut(s)	125, 416, 493, 565, 771, 995, 1042, 1241, 1269
BstFNI	CGCG	3 cut(s)	395, 449, 1421
BstH2I	RGCGCY	1 cut(s)	924
BstHHI	GCGC	4 cut(s)	395, 923, 1115, 1421
BstKTI	GATC	9 cut(s)	97, 771, 1153, 1387, 1492, 1561, 1614, 1668, 1672
BstMAI	GTCTC	3 cut(s)	336, 569, 1497
BstMBI	GATC	9 cut(s)	94, 768, 1150, 1384, 1489, 1558, 1611, 1665, 1669
BstMCI	CGRYCG	1 cut(s)	1668
BstMWI	GCNNNNNNNGC	6 cut(s)	257, 396, 501, 504, 1468, 1656
BstNI	CCWGG	1 cut(s)	693
BstSCI	CCNGG	1 cut(s)	691
BstSFI	CTRYAG	3 cut(s)	196, 316, 1432
BstSLI	GKGCMC	1 cut(s)	1201
BstUI	CGCG	3 cut(s)	395, 449, 1421
BstV1I	GCAGC	6 cut(s)	330, 402, 516, 608, 814, 1058
BstV2I	GAAGAC	1 cut(s)	1764
BstX2I	RGATCY	3 cut(s)	1384, 1489, 1558
BstXI	CCANNNNNNTGG	1 cut(s)	146
BstYI	RGATCY	3 cut(s)	1384, 1489, 1558
Bsu15I	ATCGAT	2 cut(s)	1610, 1668
Bsu36I	CCTNAGG	1 cut(s)	1554
BsuRI	GGCC	7 cut(s)	325, 375, 437, 849, 869, 1026, 1656
BsuTUI	ATCGAT	2 cut(s)	1610, 1668
BtrI	CACGTC	1 cut(s)	346
BtsCI	GGATG	9 cut(s)	125, 416, 493, 565, 771, 995, 1042, 1241, 1269
BtsI	GCAGTG	1 cut(s)	283
BtsIMutI	CAGTG	4 cut(s)	283, 289, 764, 1760
BveI	ACCTGC	1 cut(s)	1424
Cac8I	GCNNGC	5 cut(s)	323, 397, 435, 956, 1317
CfoI	GCGC	4 cut(s)	395, 923, 1115, 1421
Cfr13I	GGNCC	4 cut(s)	323, 827, 904, 1567
ClaI	ATCGAT	2 cut(s)	1610, 1668
CseI	GACGC	1 cut(s)	1063
Csp6I	GTAC	3 cut(s)	853, 1393, 1628
CviAII	CATG	6 cut(s)	235, 840, 1164, 1381, 1396, 1720
CviQI	GTAC	3 cut(s)	853, 1393, 1628
DdeI	CTNAG	8 cut(s)	100, 247, 270, 470, 573, 1142, 1187, 1554
DpnI	GATC	9 cut(s)	96, 770, 1152, 1386, 1491, 1560, 1613, 1667, 1671
DpnII	GATC	9 cut(s)	94, 768, 1150, 1384, 1489, 1558, 1611, 1665, 1669
DrdI	GACNNNNNNGTC	1 cut(s)	1762
DseDI	GACNNNNNNGTC	1 cut(s)	1762
Eam1104I	CTCTTC	3 cut(s)	612, 1168, 1677
EarI	CTCTTC	3 cut(s)	612, 1168, 1677
EciI	GGCGGA	1 cut(s)	1613
Eco130I	CCWWGG	2 cut(s)	864, 907
Eco147I	AGGCCT	2 cut(s)	437, 1026
Eco31I	GGTCTC	1 cut(s)	1497
Eco32I	GATATC	1 cut(s)	1214
Eco47I	GGWCC	3 cut(s)	827, 904, 1567
Eco47III	AGCGCT	1 cut(s)	922
Eco81I	CCTNAGG	1 cut(s)	1554
Eco88I	CYCGRG	1 cut(s)	823
EcoO109I	RGGNCCY	2 cut(s)	904, 1567
EcoRII	CCWGG	1 cut(s)	691
EcoRV	GATATC	1 cut(s)	1214
EcoT14I	CCWWGG	2 cut(s)	864, 907
EcoT22I	ATGCAT	3 cut(s)	481, 547, 1241
ErhI	CCWWGG	2 cut(s)	864, 907
Esp3I	CGTCTC	2 cut(s)	336, 569
FaeI	CATG	6 cut(s)	238, 843, 1167, 1384, 1399, 1723
FalI	AAGNNNNNCTT	6 cut(s)	717, 749, 930, 962, 1586, 1618
FaqI	GGGAC	2 cut(s)	542, 840
FatI	CATG	6 cut(s)	234, 839, 1163, 1380, 1395, 1719
FauI	CCCGC	2 cut(s)	314, 947
FauNDI	CATATG	1 cut(s)	584
FbaI	TGATCA	2 cut(s)	94, 768
FblI	GTMKAC	1 cut(s)	1431
Fnu4HI	GCNGC	8 cut(s)	319, 391, 496, 505, 597, 803, 1072, 1657
FokI	GGATG	9 cut(s)	112, 403, 500, 572, 758, 982, 1029, 1248, 1256
Fsp4HI	GCNGC	8 cut(s)	319, 391, 496, 505, 597, 803, 1072, 1657
FspBI	CTAG	3 cut(s)	1011, 1127, 1500
GlaI	GCGC	4 cut(s)	394, 922, 1114, 1420
GluI	GCNGC	8 cut(s)	319, 391, 496, 505, 597, 803, 1072, 1657
HaeII	RGCGCY	1 cut(s)	924
HaeIII	GGCC	7 cut(s)	325, 375, 437, 849, 869, 1026, 1656
HgaI	GACGC	1 cut(s)	1063
HhaI	GCGC	4 cut(s)	395, 923, 1115, 1421
Hin1II	CATG	6 cut(s)	238, 843, 1167, 1384, 1399, 1723
Hin6I	GCGC	4 cut(s)	393, 921, 1113, 1419
HinP1I	GCGC	4 cut(s)	393, 921, 1113, 1419
HincII	GTYRAC	1 cut(s)	1413
HindII	GTYRAC	1 cut(s)	1413
HindIII	AAGCTT	2 cut(s)	26, 1259
HinfI	GANTC	5 cut(s)	268, 1001, 1123, 1183, 1607
HpaI	GTTAAC	1 cut(s)	1413
HphI	GGTGA	3 cut(s)	78, 220, 745
Hpy166II	GTNNAC	4 cut(s)	1199, 1413, 1432, 1591
Hpy188I	TCNGA	7 cut(s)	241, 333, 951, 1000, 1306, 1777, 1793
Hpy188III	TCNNGA	9 cut(s)	102, 265, 296, 424, 825, 1388, 1493, 1553, 1562
Hpy8I	GTNNAC	4 cut(s)	1199, 1413, 1432, 1591
Hpy99I	CGWCG	1 cut(s)	1079
HpyAV	CCTTC	7 cut(s)	328, 448, 550, 694, 1016, 1625, 1717
HpyCH4III	ACNGT	3 cut(s)	362, 1436, 1764
HpyCH4IV	ACGT	3 cut(s)	165, 183, 345
HpyF10VI	GCNNNNNNNGC	6 cut(s)	257, 396, 501, 504, 1468, 1656
HpyF3I	CTNAG	8 cut(s)	100, 247, 270, 470, 573, 1142, 1187, 1554
HpySE526I	ACGT	3 cut(s)	165, 183, 345
Hsp92II	CATG	6 cut(s)	238, 843, 1167, 1384, 1399, 1723
HspAI	GCGC	4 cut(s)	393, 921, 1113, 1419
Ksp22I	TGATCA	2 cut(s)	94, 768
KspAI	GTTAAC	1 cut(s)	1413
Kzo9I	GATC	9 cut(s)	94, 768, 1150, 1384, 1489, 1558, 1611, 1665, 1669
LmnI	GCTCC	1 cut(s)	337
Lsp1109I	GCAGC	6 cut(s)	330, 402, 516, 608, 814, 1058
LweI	GCATC	4 cut(s)	425, 759, 1226, 1486
MaeI	CTAG	3 cut(s)	1011, 1127, 1500
MaeII	ACGT	3 cut(s)	165, 183, 345
MaeIII	GTNAC	3 cut(s)	760, 790, 989
MalI	GATC	9 cut(s)	96, 770, 1152, 1386, 1491, 1560, 1613, 1667, 1671
MbiI	CCGCTC	1 cut(s)	954
MboI	GATC	9 cut(s)	94, 768, 1150, 1384, 1489, 1558, 1611, 1665, 1669
MfeI	CAATTG	1 cut(s)	499
MflI	RGATCY	3 cut(s)	1384, 1489, 1558
MhlI	GDGCHC	2 cut(s)	401, 1201
MluCI	AATT	3 cut(s)	457, 499, 785
MlyI	GAGTC	1 cut(s)	262
MmeI	TCCRAC	1 cut(s)	163
Mph1103I	ATGCAT	3 cut(s)	481, 547, 1241
MroXI	GAANNNNTTC	1 cut(s)	16
MslI	CAYNNNNRTG	3 cut(s)	233, 369, 758
MspA1I	CMGCKG	3 cut(s)	321, 599, 758
MspR9I	CCNGG	1 cut(s)	693
MunI	CAATTG	1 cut(s)	499
Mva1269I	GAATGC	2 cut(s)	547, 886
MvaI	CCWGG	1 cut(s)	693
MvnI	CGCG	3 cut(s)	395, 449, 1421
MwoI	GCNNNNNNNGC	6 cut(s)	257, 396, 501, 504, 1468, 1656
NdeI	CATATG	1 cut(s)	584
NdeII	GATC	9 cut(s)	94, 768, 1150, 1384, 1489, 1558, 1611, 1665, 1669
NlaIII	CATG	6 cut(s)	238, 843, 1167, 1384, 1399, 1723
NlaIV	GGNNCC	5 cut(s)	828, 1293, 1369, 1386, 1569
NmeAIII	GCCGAG	1 cut(s)	895
NmuCI	GTSAC	1 cut(s)	760
NsiI	ATGCAT	3 cut(s)	481, 547, 1241
NspV	TTCGAA	2 cut(s)	687, 1680
OliI	CACNNNNGTG	1 cut(s)	758
PceI	AGGCCT	2 cut(s)	437, 1026
PcsI	WCGNNNNNNNCGW	1 cut(s)	1083
PctI	GAATGC	2 cut(s)	547, 886
PdmI	GAANNNNTTC	1 cut(s)	16
PfeI	GAWTC	4 cut(s)	1001, 1123, 1183, 1607
PkrI	GCNGC	8 cut(s)	320, 392, 497, 506, 598, 804, 1073, 1658
Ple19I	CGATCG	1 cut(s)	1668
PleI	GAGTC	1 cut(s)	262
PpsI	GAGTC	1 cut(s)	262
Ppu21I	YACGTR	1 cut(s)	166
PpuMI	RGGWCCY	2 cut(s)	904, 1567
PshBI	ATTAAT	1 cut(s)	888
PsiI	TTATAA	1 cut(s)	936
Psp1406I	AACGTT	1 cut(s)	183
Psp5II	RGGWCCY	2 cut(s)	904, 1567
Psp6I	CCWGG	1 cut(s)	691
PspGI	CCWGG	1 cut(s)	691
PspN4I	GGNNCC	5 cut(s)	828, 1293, 1369, 1386, 1569
PspPI	GGNCC	4 cut(s)	323, 827, 904, 1567
PspPPI	RGGWCCY	2 cut(s)	904, 1567
PstI	CTGCAG	1 cut(s)	320
PsuI	RGATCY	3 cut(s)	1384, 1489, 1558
PvuI	CGATCG	1 cut(s)	1668
PvuII	CAGCTG	1 cut(s)	599
RsaI	GTAC	3 cut(s)	854, 1394, 1629
RsaNI	GTAC	3 cut(s)	853, 1393, 1628
RseI	CAYNNNNRTG	3 cut(s)	233, 369, 758
SatI	GCNGC	8 cut(s)	319, 391, 496, 505, 597, 803, 1072, 1657
Sau3AI	GATC	9 cut(s)	94, 768, 1150, 1384, 1489, 1558, 1611, 1665, 1669
Sau96I	GGNCC	4 cut(s)	323, 827, 904, 1567
ScaI	AGTACT	1 cut(s)	1629
SchI	GAGTC	1 cut(s)	262
ScrFI	CCNGG	1 cut(s)	693
SduI	GDGCHC	2 cut(s)	401, 1201
SfaNI	GCATC	4 cut(s)	425, 759, 1226, 1486
SfcI	CTRYAG	3 cut(s)	196, 316, 1432
SfuI	TTCGAA	2 cut(s)	687, 1680
SinI	GGWCC	3 cut(s)	827, 904, 1567
SmiMI	CAYNNNNRTG	3 cut(s)	233, 369, 758
SmlI	CTYRAG	2 cut(s)	523, 1562
SmoI	CTYRAG	2 cut(s)	523, 1562
Sse9I	AATT	3 cut(s)	457, 499, 785
SseBI	AGGCCT	2 cut(s)	437, 1026
SsiI	CCGC	7 cut(s)	321, 495, 512, 756, 954, 1598, 1657
SspI	AATATT	2 cut(s)	713, 1109
SspMI	CTAG	3 cut(s)	1011, 1127, 1500
StuI	AGGCCT	2 cut(s)	437, 1026
StyD4I	CCNGG	1 cut(s)	691
StyI	CCWWGG	2 cut(s)	864, 907
TaaI	ACNGT	3 cut(s)	362, 1436, 1764
TaiI	ACGT	3 cut(s)	168, 186, 348
TaqI	TCGA	9 cut(s)	401, 645, 687, 1031, 1039, 1077, 1610, 1668, 1680
TaqII	GACCGA	1 cut(s)	844
TasI	AATT	3 cut(s)	457, 499, 785
TatI	WGTACW	3 cut(s)	852, 1392, 1627
TauI	GCSGC	2 cut(s)	498, 1659
TfiI	GAWTC	4 cut(s)	1001, 1123, 1183, 1607
TscAI	CASTG	4 cut(s)	283, 289, 771, 1767
TseFI	GTSAC	1 cut(s)	760
TseI	GCWGC	6 cut(s)	318, 390, 504, 596, 802, 1071
Tsp45I	GTSAC	1 cut(s)	760
TspDTI	ATGAA	7 cut(s)	641, 993, 1119, 1235, 1553, 1736, 1737
TspGWI	ACGGA	1 cut(s)	1295
TspRI	CASTG	4 cut(s)	283, 289, 771, 1767
VneI	GTGCAC	1 cut(s)	1197
VpaK11BI	GGWCC	3 cut(s)	827, 904, 1567
VspI	ATTAAT	1 cut(s)	888
XapI	RAATTY	1 cut(s)	785
XcmI	CCANNNNNNNNNTGG	3 cut(s)	303, 1229, 1378
XmiI	GTMKAC	1 cut(s)	1431
XmnI	GAANNNNTTC	1 cut(s)	16
XspI	CTAG	3 cut(s)	1011, 1127, 1500
ZrmI	AGTACT	1 cut(s)	1629
Zsp2I	ATGCAT	3 cut(s)	481, 547, 1241

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.