Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3C

Orthogroup ID

OG0015641

Physical Location & Seq

Genomic Coordinates Forward (+)

867882 .. 871530

Gene Structure 3649 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3CG012900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1785 bp

ATGGCGTTAGCAAGACACCTCACCATTTTGTTCATTGCCACTTATCTTGTCCAAACCCTTTCACTATCACCAGATGATCGCTCAGGAAGTTGTGTGCTAAACTTTACATCCTACCCATACCAACCAACTGGGGAATGCATAAGTAAAAATGCCAAGCTGAAAATAAGCGTCTGGGACAGCTGGACAACAAATCTGTGCTGTCGAAATGTGCTCACCACTTTGTCTCGAGCCTTGGCCTTCCAAGCATTTATAAGGCAGGGCGGTGTCTTTGTTTCCGATGTGGAATGGAATAACTGCACTGGCTCATTTGTTCGTCAGGACGTGTCTGCCGATCAGTGTGGCTTTAATGGTCTTTACTATGGCAGCAGCAACTGCGCCAACGTAAACTTGGCAGACATTAAGCAAGAGCAGGTGTACCAACAGGCATTGAACGATTGCTCTCAACTCAGCAATGCTTCATCATCATTCAATGCTTCTTGTGGCACTTGCACCACTTCCTTGTTAATTCTTAAGCAACATTTATCCAATAAATATTATCAGAAGAATGATGGAAACAAAACTGAAAATTCCATATGCGGTGTGGCGGCAGTTATCTCTGTTGCAGCCGGGAACATCAACAATAATTCCCTTTCTATGGACAATTACTTTGCGTGTTTGACAAAGTTAGAGAAGTTCGAACCAGGTTACTTCAAACTCACATATGCCCTGGTAGAAGCAGTATTTTCGATCTTGATAGCCATCACTGGAATATGGCTGATAGTCCTGCTGGTAAAATACGTGACGAAGAAGAAGCCCCTAAAACCGGTCCTCTCAGGATCGACTACTGCATGGTCTGGCCTGTACAGATTCTCCAAGGCTGAGATTGAGAATGCCATAAATTATGGACCTGAAAGAAAGAACCTCGGACGAGGAAGTGCCGGTCATGTTTATAAAGGGGTTCTTCCGAGTGGACAAGTTGTGGCCGTTAAGCACATAAACAAGAGTAACGTATCTGATTCGTTTACAAGAGAAGTGGAAGGGCTTTCAAGGGTTCGACACCCGAACTTGGTTTGCCTCTTTGGTTGCTGTGTTGAAGGCGGGGAGCAATATCTTGTGTATGAATATTGCTCATCAGGGAATCTAGCTCAACATCTCCTAAGAAACGACCCTGTGTTAACATGGGAAAGAAGGGTTAAGATTCTCAGAGACTGTGCACTTGCTTTGAGGTATCTCCACCACTATATTGATGGCTGCATAGTTCACAGAGATATCAAGCTTACAAACATCCTTTTGACTGCGAACATGGACCCCAAACTATCTGATTTTGGGTTGGCAAAGATGTTGGGGATGGAGGAGAGCAAAGTATTTACAGATGTTAGAGGAACAATAGGGTATATGGATCCAGAGTACATGACCAATGCTAAATTAACCTGTGCCAGTGATGTCTATAGTTTTGGTATCGTTTGCCTGCAACTTCTTTCAGGCCAAAAAGTATTTGAGCTTGATCTTGATGCGAGAGATCAACTCACAAGAAAGGCAAAGGATGTGAGTATGAACAAGCGTCCACCCGAGGATCTTGAAGATCCAAGACTAAATGGAAATGTCAACAAGGCAGACTTTGAATCGATTCTACAAATTGCAGTACTTTGTGTTGCCAAATCAAGCAAGGGTCGCCCTACGATTGACGTTGTCTTTGAAGAGATGGAAAAGGCTTGGAAGAACACTGCTGCTGAAATGAAGGCACACAGAGGGGTGAGTTCATCAGCCACACCATTGTCTTTATCTTCAGGAGTGTTATCAGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase

Protein Analysis

594

Amino Acids

65.56

Weight (kDa)

8.43

Isoelectric Point (pI)

34.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	299 - 558	1e-46	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	299 - 503	6.7e-42	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015641)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g01140
malus_domestica	MD04G1236100.v1.1 MD12G1255100.v1.1
prunus_persica	Prupe.6G356000_v2.0.a1
pyrus_communis	pycom04g20980 pycom12g23380
rosa_chinensis	RchiOBHm_Chr3g0448671
rosa_laevigata	RLG00000025880
rosa_multiflora	Rmu_sc0003116.1_g000033
rosa_roxburghii	Rroxscaffold_6G00426940
rosa_rugosa	Rorug02G0615200
rosa_samantha	Rh3AG014000 Rh3BG013800 Rh3CG012900 Rh3DG014600
rosa_wichuraiana	Rw3G001040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	251, 930
AarI	CACCTGC	1 cut(s)	400
Acc36I	ACCTGC	1 cut(s)	400
AciI	CCGC	4 cut(s)	261, 576, 584, 1077
AclWI	GGATC	5 cut(s)	823, 1373, 1386, 1556, 1560
AcoI	YGGCCR	1 cut(s)	960
AcsI	RAATTY	1 cut(s)	565
AcuI	CTGAAG	1 cut(s)	1749
AfaI	GTAC	4 cut(s)	416, 842, 1388, 1623
AfiI	CCNNNNNNNGG	3 cut(s)	634, 802, 1045
AflII	CTTAAG	1 cut(s)	509
AflIII	ACRYGT	1 cut(s)	321
AgeI	ACCGGT	1 cut(s)	802
AgsI	TTSAA	8 cut(s)	430, 469, 691, 1026, 1073, 1559, 1601, 1676
AjiI	CACGTC	1 cut(s)	322
AjnI	CCWGG	2 cut(s)	679, 705
AluBI	AGCT	5 cut(s)	157, 180, 1124, 1255, 1480
AluI	AGCT	5 cut(s)	157, 180, 1124, 1255, 1480
Alw21I	GWGCWC	2 cut(s)	213, 1195
Alw26I	GTCTC	2 cut(s)	228, 1179
Alw44I	GTGCAC	1 cut(s)	1191
AlwI	GGATC	5 cut(s)	823, 1373, 1386, 1556, 1560
AlwNI	CAGNNNCTG	2 cut(s)	372, 1188
Ama87I	CYCGRG	2 cut(s)	225, 1547
AoxI	GGCC	4 cut(s)	234, 835, 960, 1462
ApaLI	GTGCAC	1 cut(s)	1191
ApeKI	GCWGC	5 cut(s)	363, 366, 602, 1230, 1706
ApoI	RAATTY	1 cut(s)	565
ArsI	GACNNNNNNTTYG	4 cut(s)	629, 661, 1655, 1687
AsiGI	ACCGGT	1 cut(s)	802
Asp700I	GAANNNNTTC	1 cut(s)	1605
AspLEI	GCGC	1 cut(s)	377
AspS9I	GGNCC	3 cut(s)	805, 884, 1285
AsuC2I	CCSGG	1 cut(s)	607
AsuHPI	GGTGA	4 cut(s)	13, 60, 205, 1744
AsuII	TTCGAA	1 cut(s)	675
AvaI	CYCGRG	2 cut(s)	225, 1547
AvaII	GGWCC	3 cut(s)	805, 884, 1285
BaeGI	GKGCMC	1 cut(s)	1195
BamHI	GGATCC	1 cut(s)	1378
Bbv12I	GWGCWC	2 cut(s)	213, 1195
BbvI	GCAGC	5 cut(s)	375, 378, 614, 1217, 1693
BccI	CCATC	5 cut(s)	542, 746, 1220, 1321, 1675
BceAI	ACGGC	1 cut(s)	947
BcgI	CGANNNNNNTGC	2 cut(s)	705, 739
BciT130I	CCWGG	2 cut(s)	681, 707
BcnI	CCSGG	1 cut(s)	607
BcoDI	GTCTC	2 cut(s)	228, 1179
BfaI	CTAG	1 cut(s)	1121
BfmI	CTRYAG	1 cut(s)	1426
BfrI	CTTAAG	1 cut(s)	509
BfuAI	ACCTGC	1 cut(s)	400
BisI	GCNGC	6 cut(s)	364, 367, 585, 603, 1231, 1707
BlsI	GCNGC	6 cut(s)	365, 368, 586, 604, 1232, 1708
BmcAI	AGTACT	1 cut(s)	1623
Bme1390I	CCNGG	3 cut(s)	607, 681, 707
Bme18I	GGWCC	3 cut(s)	805, 884, 1285
BmeT110I	CYCGRG	2 cut(s)	225, 1547
BmgBI	CACGTC	1 cut(s)	322
BmgT120I	GGNCC	3 cut(s)	805, 884, 1285
BmiI	GGNNCC	2 cut(s)	1287, 1380
BmrFI	CCNGG	3 cut(s)	607, 681, 707
BmrI	ACTGGG	1 cut(s)	138
BmsI	GCATC	1 cut(s)	1480
BmuI	ACTGGG	1 cut(s)	138
BplI	GAGNNNNNCTC	2 cut(s)	1488, 1520
Bpu10I	CCTNAGC	1 cut(s)	82
Bpu14I	TTCGAA	1 cut(s)	675
BpuMI	CCSGG	1 cut(s)	607
Bsa29I	ATCGAT	1 cut(s)	1604
BsaAI	YACGTR	1 cut(s)	778
BsaBI	GATNNNNATC	1 cut(s)	737
BsaJI	CCNNGG	5 cut(s)	231, 705, 852, 901, 1548
BsaWI	WCCGGW	1 cut(s)	802
BsaXI	ACNNNNNCTCC	2 cut(s)	833, 863
Bsc4I	CCNNNNNNNGG	3 cut(s)	634, 802, 1045
Bse118I	RCCGGY	2 cut(s)	802, 917
Bse1I	ACTGG	4 cut(s)	133, 304, 748, 1416
Bse3DI	GCAATG	2 cut(s)	33, 457
Bse8I	GATNNNNATC	1 cut(s)	737
BseBI	CCWGG	2 cut(s)	681, 707
BseCI	ATCGAT	1 cut(s)	1604
BseDI	CCNNGG	5 cut(s)	231, 705, 852, 901, 1548
BseGI	GGATG	4 cut(s)	107, 1263, 1332, 1528
BseJI	GATNNNNATC	1 cut(s)	737
BseLI	CCNNNNNNNGG	3 cut(s)	634, 802, 1045
BseMI	GCAATG	2 cut(s)	33, 457
BseMII	CTCAG	5 cut(s)	96, 460, 825, 849, 1195
BseNI	ACTGG	4 cut(s)	133, 304, 748, 1416
BseRI	GAGGAG	1 cut(s)	1346
BseSI	GKGCMC	1 cut(s)	1195
BseXI	GCAGC	5 cut(s)	375, 378, 614, 1217, 1693
BsgI	GTGCAG	1 cut(s)	280
BshFI	GGCC	4 cut(s)	236, 837, 962, 1464
BshTI	ACCGGT	1 cut(s)	802
BshVI	ATCGAT	1 cut(s)	1604
BsiHKAI	GWGCWC	2 cut(s)	213, 1195
BsiHKCI	CYCGRG	2 cut(s)	225, 1547
BsiSI	CCGG	3 cut(s)	606, 803, 918
BslFI	GGGAC	1 cut(s)	188
BslI	CCNNNNNNNGG	3 cut(s)	634, 802, 1045
BsmAI	GTCTC	2 cut(s)	228, 1179
BsmFI	GGGAC	1 cut(s)	188
BsmI	GAATGC	2 cut(s)	140, 874
BsnI	GGCC	4 cut(s)	236, 837, 962, 1464
BsoBI	CYCGRG	2 cut(s)	225, 1547
Bsp119I	TTCGAA	1 cut(s)	675
Bsp1286I	GDGCHC	2 cut(s)	213, 1195
Bsp1407I	TGTACA	1 cut(s)	840
Bsp143I	GATC	9 cut(s)	76, 331, 726, 815, 1378, 1483, 1498, 1552, 1561
BspACI	CCGC	4 cut(s)	261, 576, 584, 1077
BspANI	GGCC	4 cut(s)	236, 837, 962, 1464
BspCNI	CTCAG	5 cut(s)	95, 459, 824, 850, 1194
BspDI	ATCGAT	1 cut(s)	1604
BspLI	GGNNCC	2 cut(s)	1287, 1380
BspMI	ACCTGC	1 cut(s)	400
BspPI	GGATC	5 cut(s)	823, 1373, 1386, 1556, 1560
BspT104I	TTCGAA	1 cut(s)	675
BspTI	CTTAAG	1 cut(s)	509
BsrDI	GCAATG	2 cut(s)	33, 457
BsrFI	RCCGGY	2 cut(s)	802, 917
BsrGI	TGTACA	1 cut(s)	840
BsrI	ACTGG	4 cut(s)	133, 304, 748, 1416
BssAI	RCCGGY	2 cut(s)	802, 917
BssECI	CCNNGG	5 cut(s)	231, 705, 852, 901, 1548
BssMI	GATC	9 cut(s)	76, 331, 726, 815, 1378, 1483, 1498, 1552, 1561
BssT1I	CCWWGG	2 cut(s)	231, 852
Bst2UI	CCWGG	2 cut(s)	681, 707
Bst4CI	ACNGT	1 cut(s)	1190
Bst6I	CTCTTC	1 cut(s)	1671
BstAFI	CTTAAG	1 cut(s)	509
BstAPI	GCANNNNNTGC	1 cut(s)	372
BstAUI	TGTACA	1 cut(s)	840
BstBAI	YACGTR	1 cut(s)	778
BstBI	TTCGAA	1 cut(s)	675
BstC8I	GCNNGC	1 cut(s)	1448
BstDEI	CTNAG	6 cut(s)	82, 446, 811, 858, 1136, 1181
BstF5I	GGATG	4 cut(s)	107, 1263, 1332, 1528
BstHHI	GCGC	1 cut(s)	377
BstKTI	GATC	9 cut(s)	79, 334, 729, 818, 1381, 1486, 1501, 1555, 1564
BstMAI	GTCTC	2 cut(s)	228, 1179
BstMBI	GATC	9 cut(s)	76, 331, 726, 815, 1378, 1483, 1498, 1552, 1561
BstMWI	GCNNNNNNNGC	3 cut(s)	242, 372, 1650
BstNI	CCWGG	2 cut(s)	681, 707
BstSCI	CCNGG	3 cut(s)	605, 679, 705
BstSFI	CTRYAG	1 cut(s)	1426
BstSLI	GKGCMC	1 cut(s)	1195
BstV1I	GCAGC	5 cut(s)	375, 378, 614, 1217, 1693
BstX2I	RGATCY	3 cut(s)	1378, 1552, 1561
BstXI	CCANNNNNNTGG	1 cut(s)	128
BstYI	RGATCY	3 cut(s)	1378, 1552, 1561
Bsu15I	ATCGAT	1 cut(s)	1604
BsuRI	GGCC	4 cut(s)	236, 837, 962, 1464
BsuTUI	ATCGAT	1 cut(s)	1604
BtrI	CACGTC	1 cut(s)	322
BtsCI	GGATG	4 cut(s)	107, 1263, 1332, 1528
BtsI	GCAGTG	1 cut(s)	1701
BtsIMutI	CAGTG	5 cut(s)	297, 341, 741, 1423, 1701
BveI	ACCTGC	1 cut(s)	400
Cac8I	GCNNGC	1 cut(s)	1448
CaiI	CAGNNNCTG	2 cut(s)	372, 1188
CfoI	GCGC	1 cut(s)	377
Cfr10I	RCCGGY	2 cut(s)	802, 917
Cfr13I	GGNCC	3 cut(s)	805, 884, 1285
ClaI	ATCGAT	1 cut(s)	1604
CseI	GACGC	2 cut(s)	157, 1529
CsiI	ACCWGGT	1 cut(s)	679
Csp6I	GTAC	4 cut(s)	415, 841, 1387, 1622
CspAI	ACCGGT	1 cut(s)	802
CspCI	CAANNNNNGTGG	4 cut(s)	28, 63, 993, 1028
CviAII	CATG	5 cut(s)	828, 923, 1158, 1282, 1390
CviQI	GTAC	4 cut(s)	415, 841, 1387, 1622
DdeI	CTNAG	6 cut(s)	82, 446, 811, 858, 1136, 1181
DpnI	GATC	9 cut(s)	78, 333, 728, 817, 1380, 1485, 1500, 1554, 1563
DpnII	GATC	9 cut(s)	76, 331, 726, 815, 1378, 1483, 1498, 1552, 1561
EaeI	YGGCCR	1 cut(s)	960
Eam1104I	CTCTTC	1 cut(s)	1671
EarI	CTCTTC	1 cut(s)	1671
Eco130I	CCWWGG	2 cut(s)	231, 852
Eco32I	GATATC	1 cut(s)	1249
Eco47I	GGWCC	3 cut(s)	805, 884, 1285
Eco57I	CTGAAG	1 cut(s)	1749
Eco88I	CYCGRG	2 cut(s)	225, 1547
EcoRII	CCWGG	2 cut(s)	679, 705
EcoRV	GATATC	1 cut(s)	1249
EcoT14I	CCWWGG	2 cut(s)	231, 852
EcoT22I	ATGCAT	1 cut(s)	140
ErhI	CCWWGG	2 cut(s)	231, 852
FaeI	CATG	5 cut(s)	831, 926, 1161, 1285, 1393
FalI	AAGNNNNNCTT	4 cut(s)	924, 956, 1580, 1612
FaqI	GGGAC	1 cut(s)	188
FatI	CATG	5 cut(s)	827, 922, 1157, 1281, 1389
FauI	CCCGC	1 cut(s)	1070
FauNDI	CATATG	2 cut(s)	572, 700
Fnu4HI	GCNGC	6 cut(s)	364, 367, 585, 603, 1231, 1707
FokI	GGATG	4 cut(s)	94, 1250, 1339, 1535
Fsp4HI	GCNGC	6 cut(s)	364, 367, 585, 603, 1231, 1707
FspBI	CTAG	1 cut(s)	1121
GlaI	GCGC	1 cut(s)	376
GluI	GCNGC	6 cut(s)	364, 367, 585, 603, 1231, 1707
HaeIII	GGCC	4 cut(s)	236, 837, 962, 1464
HapII	CCGG	3 cut(s)	606, 803, 918
HgaI	GACGC	2 cut(s)	157, 1529
HhaI	GCGC	1 cut(s)	377
Hin1II	CATG	5 cut(s)	831, 926, 1161, 1285, 1393
Hin6I	GCGC	1 cut(s)	375
HinP1I	GCGC	1 cut(s)	375
HincII	GTYRAC	2 cut(s)	1155, 1585
HindII	GTYRAC	2 cut(s)	1155, 1585
HindIII	AAGCTT	1 cut(s)	1253
HinfI	GANTC	6 cut(s)	846, 995, 1117, 1177, 1601, 1606
HpaI	GTTAAC	1 cut(s)	1155
HpaII	CCGG	3 cut(s)	606, 803, 918
HphI	GGTGA	4 cut(s)	13, 60, 205, 1744
Hpy166II	GTNNAC	9 cut(s)	385, 415, 950, 1002, 1155, 1193, 1240, 1544, 1585
Hpy188I	TCNGA	7 cut(s)	277, 540, 905, 945, 994, 1184, 1300
Hpy188III	TCNNGA	9 cut(s)	84, 225, 317, 730, 813, 1382, 1487, 1556, 1767
Hpy8I	GTNNAC	9 cut(s)	385, 415, 950, 1002, 1155, 1193, 1240, 1544, 1585
HpyAV	CCTTC	5 cut(s)	247, 1010, 1067, 1161, 1711
HpyCH4III	ACNGT	1 cut(s)	1190
HpyCH4IV	ACGT	5 cut(s)	321, 381, 777, 987, 1665
HpyCH4V	TGCA	9 cut(s)	138, 297, 489, 602, 827, 1193, 1233, 1450, 1619
HpyF10VI	GCNNNNNNNGC	3 cut(s)	242, 372, 1650
HpyF3I	CTNAG	6 cut(s)	82, 446, 811, 858, 1136, 1181
HpySE526I	ACGT	5 cut(s)	321, 381, 777, 987, 1665
Hsp92II	CATG	5 cut(s)	831, 926, 1161, 1285, 1393
HspAI	GCGC	1 cut(s)	375
KspAI	GTTAAC	1 cut(s)	1155
Kzo9I	GATC	9 cut(s)	76, 331, 726, 815, 1378, 1483, 1498, 1552, 1561
LmnI	GCTCC	1 cut(s)	1081
Lsp1109I	GCAGC	5 cut(s)	375, 378, 614, 1217, 1693
LweI	GCATC	1 cut(s)	1480
MabI	ACCWGGT	1 cut(s)	679
MaeI	CTAG	1 cut(s)	1121
MaeII	ACGT	5 cut(s)	321, 381, 777, 987, 1665
MaeIII	GTNAC	3 cut(s)	683, 778, 983
MalI	GATC	9 cut(s)	78, 333, 728, 817, 1380, 1485, 1500, 1554, 1563
MboI	GATC	9 cut(s)	76, 331, 726, 815, 1378, 1483, 1498, 1552, 1561
MboII	GAAGA	8 cut(s)	553, 796, 799, 932, 1571, 1688, 1708, 1755
MflI	RGATCY	3 cut(s)	1378, 1552, 1561
MhlI	GDGCHC	2 cut(s)	213, 1195
MluCI	AATT	7 cut(s)	504, 565, 622, 640, 877, 1403, 1614
Mph1103I	ATGCAT	1 cut(s)	140
MroXI	GAANNNNTTC	1 cut(s)	1605
MseI	TTAA	8 cut(s)	345, 399, 503, 510, 966, 1154, 1173, 1406
MspA1I	CMGCKG	1 cut(s)	180
MspCI	CTTAAG	1 cut(s)	509
MspI	CCGG	3 cut(s)	606, 803, 918
MspR9I	CCNGG	3 cut(s)	607, 681, 707
Mva1269I	GAATGC	2 cut(s)	140, 874
MvaI	CCWGG	2 cut(s)	681, 707
MwoI	GCNNNNNNNGC	3 cut(s)	242, 372, 1650
NciI	CCSGG	1 cut(s)	607
NdeI	CATATG	2 cut(s)	572, 700
NdeII	GATC	9 cut(s)	76, 331, 726, 815, 1378, 1483, 1498, 1552, 1561
NlaIII	CATG	5 cut(s)	831, 926, 1161, 1285, 1393
NlaIV	GGNNCC	2 cut(s)	1287, 1380
NmuCI	GTSAC	1 cut(s)	778
NsiI	ATGCAT	1 cut(s)	140
NspV	TTCGAA	1 cut(s)	675
PaeR7I	CTCGAG	1 cut(s)	225
PaqCI	CACCTGC	1 cut(s)	400
PcsI	WCGNNNNNNNCGW	1 cut(s)	327
PctI	GAATGC	2 cut(s)	140, 874
PdmI	GAANNNNTTC	1 cut(s)	1605
PfeI	GAWTC	6 cut(s)	846, 995, 1117, 1177, 1601, 1606
PflFI	GACNNNGTC	1 cut(s)	1667
PinAI	ACCGGT	1 cut(s)	802
PkrI	GCNGC	6 cut(s)	365, 368, 586, 604, 1232, 1708
Ppu21I	YACGTR	1 cut(s)	778
PsiI	TTATAA	2 cut(s)	251, 930
Psp6I	CCWGG	2 cut(s)	679, 705
PspGI	CCWGG	2 cut(s)	679, 705
PspN4I	GGNNCC	2 cut(s)	1287, 1380
PspPI	GGNCC	3 cut(s)	805, 884, 1285
PstNI	CAGNNNCTG	2 cut(s)	372, 1188
PsuI	RGATCY	3 cut(s)	1378, 1552, 1561
PsyI	GACNNNGTC	1 cut(s)	1667
PvuII	CAGCTG	1 cut(s)	180
RsaI	GTAC	4 cut(s)	416, 842, 1388, 1623
RsaNI	GTAC	4 cut(s)	415, 841, 1387, 1622
SaqAI	TTAA	8 cut(s)	345, 399, 503, 510, 966, 1154, 1173, 1406
SatI	GCNGC	6 cut(s)	364, 367, 585, 603, 1231, 1707
Sau3AI	GATC	9 cut(s)	76, 331, 726, 815, 1378, 1483, 1498, 1552, 1561
Sau96I	GGNCC	3 cut(s)	805, 884, 1285
ScaI	AGTACT	1 cut(s)	1623
ScrFI	CCNGG	3 cut(s)	607, 681, 707
SduI	GDGCHC	2 cut(s)	213, 1195
SexAI	ACCWGGT	1 cut(s)	679
SfaNI	GCATC	1 cut(s)	1480
SfcI	CTRYAG	1 cut(s)	1426
Sfr274I	CTCGAG	1 cut(s)	225
SfuI	TTCGAA	1 cut(s)	675
SinI	GGWCC	3 cut(s)	805, 884, 1285
SlaI	CTCGAG	1 cut(s)	225
SmlI	CTYRAG	2 cut(s)	225, 509
SmoI	CTYRAG	2 cut(s)	225, 509
Sse9I	AATT	7 cut(s)	504, 565, 622, 640, 877, 1403, 1614
SsiI	CCGC	4 cut(s)	261, 576, 584, 1077
SspI	AATATT	2 cut(s)	533, 1103
SspMI	CTAG	1 cut(s)	1121
StyD4I	CCNGG	3 cut(s)	605, 679, 705
StyI	CCWWGG	2 cut(s)	231, 852
TaaI	ACNGT	1 cut(s)	1190
TaiI	ACGT	5 cut(s)	324, 384, 780, 990, 1668
TaqI	TCGA	7 cut(s)	202, 226, 675, 725, 818, 1033, 1604
TasI	AATT	7 cut(s)	504, 565, 622, 640, 877, 1403, 1614
TatI	WGTACW	3 cut(s)	840, 1386, 1621
TauI	GCSGC	1 cut(s)	587
TfiI	GAWTC	6 cut(s)	846, 995, 1117, 1177, 1601, 1606
Tru1I	TTAA	8 cut(s)	345, 399, 503, 510, 966, 1154, 1173, 1406
Tru9I	TTAA	8 cut(s)	345, 399, 503, 510, 966, 1154, 1173, 1406
TscAI	CASTG	5 cut(s)	304, 341, 748, 1423, 1708
TseFI	GTSAC	1 cut(s)	778
TseI	GCWGC	5 cut(s)	363, 366, 602, 1230, 1706
Tsp45I	GTSAC	1 cut(s)	778
TspDTI	ATGAA	6 cut(s)	22, 447, 1113, 1547, 1728, 1730
TspRI	CASTG	5 cut(s)	304, 341, 748, 1423, 1708
Tth111I	GACNNNGTC	1 cut(s)	1667
Vha464I	CTTAAG	1 cut(s)	509
VneI	GTGCAC	1 cut(s)	1191
VpaK11BI	GGWCC	3 cut(s)	805, 884, 1285
XapI	RAATTY	1 cut(s)	565
XcmI	CCANNNNNNNNNTGG	3 cut(s)	385, 577, 1223
XhoI	CTCGAG	1 cut(s)	225
XmnI	GAANNNNTTC	1 cut(s)	1605
XspI	CTAG	1 cut(s)	1121
ZrmI	AGTACT	1 cut(s)	1623
Zsp2I	ATGCAT	1 cut(s)	140

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.