Rh3AG014000

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3A
Physical Location & Seq
Forward (+)
867982 .. 871315
3334 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3AG014000.1

Sequence Viewer

Length: 1524 bp
ATGGCGTTAGCAAGACACCTCACCATTTTGTTCATTGCCACTTATCTTGTCCAAACCCTTTCACTATCACCAGATGATCGCTCAGGAAGTTGTGTGCTAAACTTTACATCCTACCCATACCAACCAACTGGGGAATGCATAAGTAAAAATGCCAAGCTGAAAATAAGCGTCTGGGACAGCTGGACAACAAATCTGTGCTGTCGAAATGTGCTCACCACTTTGTCTCGAGCCTTGGCCTTCCAAGCATTTATAAGGCAGGGCGGTGTCTTTGTTTCCGATGTGGAATGGAATAACTGCACTGGCTCATTTGTTCGTCAGGACGTGTCTGCCGATCAGTGTGGCTTTAATGGTCTTTACTATGGCAGCAGCAACTGCGCCAACGTAAACTTGGCAGACATTAAGCAAGAGCAGGTGTACCAACAGGCATTGAACGATTGCTCTCAACTCAGCAATGCTTCATCATCATTCAATGCTTCTTGTGGCACTTGCACCACTTCCTTGTTAATTCTTAAGCAACATTTATCCAATAAATATTATCAGAAGAATGATGGAAACAAAACTGAAAATTCCATATGCGGTGTGGCGGCAGTTATCTCTGTTGCAGCCGGGAACATCAACAATAATTCCCTTTCTATGGACAATTACTTTGCGTGTTTGACAAAGTTAGAGAAGTTCGAACCAGGTTACTTCAAACTCACATATGCCCTGGTAGAAGCAGTATTTTCGATCTTGATAGCCATCACTGGAATATGGCTGATAGTCCTGCTGGTAAAATACGTGACGAAGAAGAAGCCCCTAAAACCGGTCCTCTCAGGATCGACTACTGCATGGTCTGGCCTGTACAGATTCTCCAAGGCTGAGATTGAGAATGCCATAAATTATGGACCTGAAAGAAAGAACCTCGGACGAGGAAGTGCCGGTCATGTTTATAAAGGGGTTCTTCCGAGTGGACAAGTTGTGGCCGTTAAGCACATAAACAAGAGTAACGTATCTGATTCGTTTACAAGAGAAGTGGAAGGGCTTTCAAGGGTTCGACACCCGAACTTGGTTTGCCTCTTTGGTTGCTGTGTTGAAGGCGGGGAGCAATATCTTGTGTATGAATATTGCTCATCAGGGAATCTAGCTCAACATCTCCTAAGAAACGACCCTGTGTTAACATGGGAAAGAAGGGTTAAGATTCTCAGAGACTGTGCACTTGCTTTGAGGTATCTCCACCACTATATTGATGGCTGCATAGTTCACAGAGATATCAAGGCAAAGGATGTGAGTATGAACAAGCGTCCACCCGAGGATCTTGAAGATCCAAGACTAAATGGAAATGTCAACAAGGCAGACTTTGAATCGATTCTACAAATTGCAGTACTTTGTGTTGCCAAATCAAGCAAGGGTCGCCCTACGATTGACGTTGTCTTTGAAGAGATGGAAAAGGCTTGGAAGAACACTGCTGCTGAAATGAAGGCACACAGAGGGGTGAGTTCATCAGCCACACCATTGTCTTTATCTTCAGGAGTGTTATCAGTTTGA

Protein Analysis

507

Amino Acids

55.88

Weight (kDa)

8.72

Isoelectric Point (pI)

35.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SPARK PF19160 27 - 192 1.1e-10 SPARK
PK_Tyr_Ser-Thr PF07714 299 - 427 5.9e-24 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 299 - 422 1.3e-22 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0015641)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 251, 930
AarI CACCTGC 1 cut(s) 400
Acc36I ACCTGC 1 cut(s) 400
AciI CCGC 4 cut(s) 261, 576, 584, 1077
AclWI GGATC 3 cut(s) 823, 1295, 1299
AcoI YGGCCR 1 cut(s) 960
AcsI RAATTY 1 cut(s) 565
AcuI CTGAAG 1 cut(s) 1488
AfaI GTAC 3 cut(s) 416, 842, 1362
AfiI CCNNNNNNNGG 3 cut(s) 634, 802, 1045
AflII CTTAAG 1 cut(s) 509
AflIII ACRYGT 1 cut(s) 321
AgeI ACCGGT 1 cut(s) 802
AgsI TTSAA 8 cut(s) 430, 469, 691, 1026, 1073, 1298, 1340, 1415
AjiI CACGTC 1 cut(s) 322
AjnI CCWGG 2 cut(s) 679, 705
AluBI AGCT 3 cut(s) 157, 180, 1124
AluI AGCT 3 cut(s) 157, 180, 1124
Alw21I GWGCWC 2 cut(s) 213, 1195
Alw26I GTCTC 2 cut(s) 228, 1179
Alw44I GTGCAC 1 cut(s) 1191
AlwI GGATC 3 cut(s) 823, 1295, 1299
AlwNI CAGNNNCTG 2 cut(s) 372, 1188
Ama87I CYCGRG 2 cut(s) 225, 1286
AoxI GGCC 3 cut(s) 234, 835, 960
ApaLI GTGCAC 1 cut(s) 1191
ApeKI GCWGC 5 cut(s) 363, 366, 602, 1230, 1445
ApoI RAATTY 1 cut(s) 565
ArsI GACNNNNNNTTYG 4 cut(s) 629, 661, 1394, 1426
AsiGI ACCGGT 1 cut(s) 802
Asp700I GAANNNNTTC 1 cut(s) 1344
AspLEI GCGC 1 cut(s) 377
AspS9I GGNCC 2 cut(s) 805, 884
AsuC2I CCSGG 1 cut(s) 607
AsuHPI GGTGA 4 cut(s) 13, 60, 205, 1483
AsuII TTCGAA 1 cut(s) 675
AvaI CYCGRG 2 cut(s) 225, 1286
AvaII GGWCC 2 cut(s) 805, 884
BaeGI GKGCMC 1 cut(s) 1195
Bbv12I GWGCWC 2 cut(s) 213, 1195
BbvI GCAGC 5 cut(s) 375, 378, 614, 1217, 1432
BccI CCATC 4 cut(s) 542, 746, 1220, 1414
BceAI ACGGC 1 cut(s) 947
BcgI CGANNNNNNTGC 2 cut(s) 705, 739
BciT130I CCWGG 2 cut(s) 681, 707
BcnI CCSGG 1 cut(s) 607
BcoDI GTCTC 2 cut(s) 228, 1179
BfaI CTAG 1 cut(s) 1121
BfrI CTTAAG 1 cut(s) 509
BfuAI ACCTGC 1 cut(s) 400
BisI GCNGC 6 cut(s) 364, 367, 585, 603, 1231, 1446
BlsI GCNGC 6 cut(s) 365, 368, 586, 604, 1232, 1447
BmcAI AGTACT 1 cut(s) 1362
Bme1390I CCNGG 3 cut(s) 607, 681, 707
Bme18I GGWCC 2 cut(s) 805, 884
BmeT110I CYCGRG 2 cut(s) 225, 1286
BmgBI CACGTC 1 cut(s) 322
BmgT120I GGNCC 2 cut(s) 805, 884
BmrFI CCNGG 3 cut(s) 607, 681, 707
BmrI ACTGGG 1 cut(s) 138
BmuI ACTGGG 1 cut(s) 138
Bpu10I CCTNAGC 1 cut(s) 82
Bpu14I TTCGAA 1 cut(s) 675
BpuMI CCSGG 1 cut(s) 607
Bsa29I ATCGAT 1 cut(s) 1343
BsaAI YACGTR 1 cut(s) 778
BsaBI GATNNNNATC 1 cut(s) 737
BsaJI CCNNGG 5 cut(s) 231, 705, 852, 901, 1287
BsaWI WCCGGW 1 cut(s) 802
BsaXI ACNNNNNCTCC 2 cut(s) 833, 863
Bsc4I CCNNNNNNNGG 3 cut(s) 634, 802, 1045
Bse118I RCCGGY 2 cut(s) 802, 917
Bse1I ACTGG 3 cut(s) 133, 304, 748
Bse3DI GCAATG 2 cut(s) 33, 457
Bse8I GATNNNNATC 1 cut(s) 737
BseBI CCWGG 2 cut(s) 681, 707
BseCI ATCGAT 1 cut(s) 1343
BseDI CCNNGG 5 cut(s) 231, 705, 852, 901, 1287
BseGI GGATG 2 cut(s) 107, 1267
BseJI GATNNNNATC 1 cut(s) 737
BseLI CCNNNNNNNGG 3 cut(s) 634, 802, 1045
BseMI GCAATG 2 cut(s) 33, 457
BseMII CTCAG 5 cut(s) 96, 460, 825, 849, 1195
BseNI ACTGG 3 cut(s) 133, 304, 748
BseSI GKGCMC 1 cut(s) 1195
BseXI GCAGC 5 cut(s) 375, 378, 614, 1217, 1432
BsgI GTGCAG 1 cut(s) 280
BshFI GGCC 3 cut(s) 236, 837, 962
BshTI ACCGGT 1 cut(s) 802
BshVI ATCGAT 1 cut(s) 1343
BsiHKAI GWGCWC 2 cut(s) 213, 1195
BsiHKCI CYCGRG 2 cut(s) 225, 1286
BsiSI CCGG 3 cut(s) 606, 803, 918
BslFI GGGAC 1 cut(s) 188
BslI CCNNNNNNNGG 3 cut(s) 634, 802, 1045
BsmAI GTCTC 2 cut(s) 228, 1179
BsmFI GGGAC 1 cut(s) 188
BsmI GAATGC 2 cut(s) 140, 874
BsnI GGCC 3 cut(s) 236, 837, 962
BsoBI CYCGRG 2 cut(s) 225, 1286
Bsp119I TTCGAA 1 cut(s) 675
Bsp1286I GDGCHC 2 cut(s) 213, 1195
Bsp1407I TGTACA 1 cut(s) 840
Bsp143I GATC 6 cut(s) 76, 331, 726, 815, 1291, 1300
BspACI CCGC 4 cut(s) 261, 576, 584, 1077
BspANI GGCC 3 cut(s) 236, 837, 962
BspCNI CTCAG 5 cut(s) 95, 459, 824, 850, 1194
BspDI ATCGAT 1 cut(s) 1343
BspMI ACCTGC 1 cut(s) 400
BspPI GGATC 3 cut(s) 823, 1295, 1299
BspT104I TTCGAA 1 cut(s) 675
BspTI CTTAAG 1 cut(s) 509
BsrDI GCAATG 2 cut(s) 33, 457
BsrFI RCCGGY 2 cut(s) 802, 917
BsrGI TGTACA 1 cut(s) 840
BsrI ACTGG 3 cut(s) 133, 304, 748
BssAI RCCGGY 2 cut(s) 802, 917
BssECI CCNNGG 5 cut(s) 231, 705, 852, 901, 1287
BssMI GATC 6 cut(s) 76, 331, 726, 815, 1291, 1300
BssT1I CCWWGG 2 cut(s) 231, 852
Bst2UI CCWGG 2 cut(s) 681, 707
Bst4CI ACNGT 1 cut(s) 1190
Bst6I CTCTTC 1 cut(s) 1410
BstAFI CTTAAG 1 cut(s) 509
BstAPI GCANNNNNTGC 1 cut(s) 372
BstAUI TGTACA 1 cut(s) 840
BstBAI YACGTR 1 cut(s) 778
BstBI TTCGAA 1 cut(s) 675
BstDEI CTNAG 6 cut(s) 82, 446, 811, 858, 1136, 1181
BstF5I GGATG 2 cut(s) 107, 1267
BstHHI GCGC 1 cut(s) 377
BstKTI GATC 6 cut(s) 79, 334, 729, 818, 1294, 1303
BstMAI GTCTC 2 cut(s) 228, 1179
BstMBI GATC 6 cut(s) 76, 331, 726, 815, 1291, 1300
BstMWI GCNNNNNNNGC 3 cut(s) 242, 372, 1389
BstNI CCWGG 2 cut(s) 681, 707
BstSCI CCNGG 3 cut(s) 605, 679, 705
BstSLI GKGCMC 1 cut(s) 1195
BstV1I GCAGC 5 cut(s) 375, 378, 614, 1217, 1432
BstX2I RGATCY 2 cut(s) 1291, 1300
BstXI CCANNNNNNTGG 1 cut(s) 128
BstYI RGATCY 2 cut(s) 1291, 1300
Bsu15I ATCGAT 1 cut(s) 1343
BsuRI GGCC 3 cut(s) 236, 837, 962
BsuTUI ATCGAT 1 cut(s) 1343
BtrI CACGTC 1 cut(s) 322
BtsCI GGATG 2 cut(s) 107, 1267
BtsI GCAGTG 1 cut(s) 1440
BtsIMutI CAGTG 4 cut(s) 297, 341, 741, 1440
BveI ACCTGC 1 cut(s) 400
CaiI CAGNNNCTG 2 cut(s) 372, 1188
CfoI GCGC 1 cut(s) 377
Cfr10I RCCGGY 2 cut(s) 802, 917
Cfr13I GGNCC 2 cut(s) 805, 884
ClaI ATCGAT 1 cut(s) 1343
CseI GACGC 2 cut(s) 157, 1268
CsiI ACCWGGT 1 cut(s) 679
Csp6I GTAC 3 cut(s) 415, 841, 1361
CspAI ACCGGT 1 cut(s) 802
CspCI CAANNNNNGTGG 4 cut(s) 28, 63, 993, 1028
CviAII CATG 3 cut(s) 828, 923, 1158
CviQI GTAC 3 cut(s) 415, 841, 1361
DdeI CTNAG 6 cut(s) 82, 446, 811, 858, 1136, 1181
DpnI GATC 6 cut(s) 78, 333, 728, 817, 1293, 1302
DpnII GATC 6 cut(s) 76, 331, 726, 815, 1291, 1300
EaeI YGGCCR 1 cut(s) 960
Eam1104I CTCTTC 1 cut(s) 1410
EarI CTCTTC 1 cut(s) 1410
Eco130I CCWWGG 2 cut(s) 231, 852
Eco32I GATATC 1 cut(s) 1249
Eco47I GGWCC 2 cut(s) 805, 884
Eco57I CTGAAG 1 cut(s) 1488
Eco88I CYCGRG 2 cut(s) 225, 1286
EcoRII CCWGG 2 cut(s) 679, 705
EcoRV GATATC 1 cut(s) 1249
EcoT14I CCWWGG 2 cut(s) 231, 852
EcoT22I ATGCAT 1 cut(s) 140
ErhI CCWWGG 2 cut(s) 231, 852
FaeI CATG 3 cut(s) 831, 926, 1161
FalI AAGNNNNNCTT 4 cut(s) 924, 956, 1319, 1351
FaqI GGGAC 1 cut(s) 188
FatI CATG 3 cut(s) 827, 922, 1157
FauI CCCGC 1 cut(s) 1070
FauNDI CATATG 2 cut(s) 572, 700
Fnu4HI GCNGC 6 cut(s) 364, 367, 585, 603, 1231, 1446
FokI GGATG 2 cut(s) 94, 1274
Fsp4HI GCNGC 6 cut(s) 364, 367, 585, 603, 1231, 1446
FspBI CTAG 1 cut(s) 1121
GlaI GCGC 1 cut(s) 376
GluI GCNGC 6 cut(s) 364, 367, 585, 603, 1231, 1446
HaeIII GGCC 3 cut(s) 236, 837, 962
HapII CCGG 3 cut(s) 606, 803, 918
HgaI GACGC 2 cut(s) 157, 1268
HhaI GCGC 1 cut(s) 377
Hin1II CATG 3 cut(s) 831, 926, 1161
Hin6I GCGC 1 cut(s) 375
HinP1I GCGC 1 cut(s) 375
HincII GTYRAC 2 cut(s) 1155, 1324
HindII GTYRAC 2 cut(s) 1155, 1324
HinfI GANTC 6 cut(s) 846, 995, 1117, 1177, 1340, 1345
HpaI GTTAAC 1 cut(s) 1155
HpaII CCGG 3 cut(s) 606, 803, 918
HphI GGTGA 4 cut(s) 13, 60, 205, 1483
Hpy166II GTNNAC 9 cut(s) 385, 415, 950, 1002, 1155, 1193, 1240, 1283, 1324
Hpy188I TCNGA 6 cut(s) 277, 540, 905, 945, 994, 1184
Hpy188III TCNNGA 7 cut(s) 84, 225, 317, 730, 813, 1295, 1506
Hpy8I GTNNAC 9 cut(s) 385, 415, 950, 1002, 1155, 1193, 1240, 1283, 1324
HpyAV CCTTC 5 cut(s) 247, 1010, 1067, 1161, 1450
HpyCH4III ACNGT 1 cut(s) 1190
HpyCH4IV ACGT 5 cut(s) 321, 381, 777, 987, 1404
HpyCH4V TGCA 8 cut(s) 138, 297, 489, 602, 827, 1193, 1233, 1358
HpyF10VI GCNNNNNNNGC 3 cut(s) 242, 372, 1389
HpyF3I CTNAG 6 cut(s) 82, 446, 811, 858, 1136, 1181
HpySE526I ACGT 5 cut(s) 321, 381, 777, 987, 1404
Hsp92II CATG 3 cut(s) 831, 926, 1161
HspAI GCGC 1 cut(s) 375
KspAI GTTAAC 1 cut(s) 1155
Kzo9I GATC 6 cut(s) 76, 331, 726, 815, 1291, 1300
LmnI GCTCC 1 cut(s) 1081
Lsp1109I GCAGC 5 cut(s) 375, 378, 614, 1217, 1432
MabI ACCWGGT 1 cut(s) 679
MaeI CTAG 1 cut(s) 1121
MaeII ACGT 5 cut(s) 321, 381, 777, 987, 1404
MaeIII GTNAC 3 cut(s) 683, 778, 983
MalI GATC 6 cut(s) 78, 333, 728, 817, 1293, 1302
MboI GATC 6 cut(s) 76, 331, 726, 815, 1291, 1300
MboII GAAGA 8 cut(s) 553, 796, 799, 932, 1310, 1427, 1447, 1494
MflI RGATCY 2 cut(s) 1291, 1300
MhlI GDGCHC 2 cut(s) 213, 1195
MluCI AATT 6 cut(s) 504, 565, 622, 640, 877, 1353
MnlI CCTC 8 cut(s) 29, 818, 902, 911, 1064, 1197, 1282, 1460
Mph1103I ATGCAT 1 cut(s) 140
MroXI GAANNNNTTC 1 cut(s) 1344
MseI TTAA 7 cut(s) 345, 399, 503, 510, 966, 1154, 1173
MspA1I CMGCKG 1 cut(s) 180
MspCI CTTAAG 1 cut(s) 509
MspI CCGG 3 cut(s) 606, 803, 918
MspR9I CCNGG 3 cut(s) 607, 681, 707
Mva1269I GAATGC 2 cut(s) 140, 874
MvaI CCWGG 2 cut(s) 681, 707
MwoI GCNNNNNNNGC 3 cut(s) 242, 372, 1389
NciI CCSGG 1 cut(s) 607
NdeI CATATG 2 cut(s) 572, 700
NdeII GATC 6 cut(s) 76, 331, 726, 815, 1291, 1300
NlaIII CATG 3 cut(s) 831, 926, 1161
NmuCI GTSAC 1 cut(s) 778
NsiI ATGCAT 1 cut(s) 140
NspV TTCGAA 1 cut(s) 675
PaeR7I CTCGAG 1 cut(s) 225
PaqCI CACCTGC 1 cut(s) 400
PcsI WCGNNNNNNNCGW 1 cut(s) 327
PctI GAATGC 2 cut(s) 140, 874
PdmI GAANNNNTTC 1 cut(s) 1344
PfeI GAWTC 6 cut(s) 846, 995, 1117, 1177, 1340, 1345
PflFI GACNNNGTC 1 cut(s) 1406
PinAI ACCGGT 1 cut(s) 802
PkrI GCNGC 6 cut(s) 365, 368, 586, 604, 1232, 1447
Ppu21I YACGTR 1 cut(s) 778
PsiI TTATAA 2 cut(s) 251, 930
Psp6I CCWGG 2 cut(s) 679, 705
PspGI CCWGG 2 cut(s) 679, 705
PspPI GGNCC 2 cut(s) 805, 884
PstNI CAGNNNCTG 2 cut(s) 372, 1188
PsuI RGATCY 2 cut(s) 1291, 1300
PsyI GACNNNGTC 1 cut(s) 1406
PvuII CAGCTG 1 cut(s) 180
RsaI GTAC 3 cut(s) 416, 842, 1362
RsaNI GTAC 3 cut(s) 415, 841, 1361
SaqAI TTAA 7 cut(s) 345, 399, 503, 510, 966, 1154, 1173
SatI GCNGC 6 cut(s) 364, 367, 585, 603, 1231, 1446
Sau3AI GATC 6 cut(s) 76, 331, 726, 815, 1291, 1300
Sau96I GGNCC 2 cut(s) 805, 884
ScaI AGTACT 1 cut(s) 1362
ScrFI CCNGG 3 cut(s) 607, 681, 707
SduI GDGCHC 2 cut(s) 213, 1195
SexAI ACCWGGT 1 cut(s) 679
Sfr274I CTCGAG 1 cut(s) 225
SfuI TTCGAA 1 cut(s) 675
SinI GGWCC 2 cut(s) 805, 884
SlaI CTCGAG 1 cut(s) 225
SmlI CTYRAG 2 cut(s) 225, 509
SmoI CTYRAG 2 cut(s) 225, 509
Sse9I AATT 6 cut(s) 504, 565, 622, 640, 877, 1353
SsiI CCGC 4 cut(s) 261, 576, 584, 1077
SspI AATATT 2 cut(s) 533, 1103
SspMI CTAG 1 cut(s) 1121
StyD4I CCNGG 3 cut(s) 605, 679, 705
StyI CCWWGG 2 cut(s) 231, 852
TaaI ACNGT 1 cut(s) 1190
TaiI ACGT 5 cut(s) 324, 384, 780, 990, 1407
TaqI TCGA 7 cut(s) 202, 226, 675, 725, 818, 1033, 1343
TasI AATT 6 cut(s) 504, 565, 622, 640, 877, 1353
TatI WGTACW 2 cut(s) 840, 1360
TauI GCSGC 1 cut(s) 587
TfiI GAWTC 6 cut(s) 846, 995, 1117, 1177, 1340, 1345
Tru1I TTAA 7 cut(s) 345, 399, 503, 510, 966, 1154, 1173
Tru9I TTAA 7 cut(s) 345, 399, 503, 510, 966, 1154, 1173
TscAI CASTG 4 cut(s) 304, 341, 748, 1447
TseFI GTSAC 1 cut(s) 778
TseI GCWGC 5 cut(s) 363, 366, 602, 1230, 1445
Tsp45I GTSAC 1 cut(s) 778
TspDTI ATGAA 6 cut(s) 22, 447, 1113, 1286, 1467, 1469
TspRI CASTG 4 cut(s) 304, 341, 748, 1447
Tth111I GACNNNGTC 1 cut(s) 1406
Vha464I CTTAAG 1 cut(s) 509
VneI GTGCAC 1 cut(s) 1191
VpaK11BI GGWCC 2 cut(s) 805, 884
XapI RAATTY 1 cut(s) 565
XcmI CCANNNNNNNNNTGG 3 cut(s) 385, 577, 1223
XhoI CTCGAG 1 cut(s) 225
XmnI GAANNNNTTC 1 cut(s) 1344
XspI CTAG 1 cut(s) 1121
ZrmI AGTACT 1 cut(s) 1362
Zsp2I ATGCAT 1 cut(s) 140
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.