Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0015641

Physical Location & Seq

Genomic Coordinates Reverse (-)

48893276 .. 48896586

Gene Structure 3311 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000025880

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1791 bp

ATGGCGTTAGCAAGACACCTCACCATTTTGTTCATTGCCACTTATCTTGTCCAAACCCTTTCACTATCACCAGATGATCGCTCAGGAAGTTGTGTGCTAAACTTTACATCCTACCCATATCAACCAACTGGGGAATGCATAAGTAAAAATGCCAAGCTGAAAATAAGCGTCTGGGACAGCTGGACAACAAATCTGTGCTGTCGAAATGTGCTCACCACTTTGTCTCAAGCCTTGGCCTTCCAAGCATTTAAAAGGCAGGGCGGTGTCTTTGTTTCGGATGTGGAATGGAATAACTGCACTGGCTCCTTTGTTCGTCAGGACGTGTCTGCCGATCAGTGTGGCTTTAATGGTCTTTACTATGGCAGCAGCAACTGCGCTAACGTAAACTTGGCAGACATTAAGCAAGAGAAGGTGTACCAACAGGCATTGAACGATTGCTCTCAAGTCAGCAATGCTTCATCATCATTCAATGCTACTTGTGGCACTTGTACCACTTCCTTGTTAATTCTTAAGCAACATTTATCCAATAAATATTATCAGAAGAATGATGGAAACAAAACTGAAAATTCCATATGCGGTGTGGCGGCAGTTATCTCTGTTGCAGCCGGGAACATCAACAATTCCCTTTCGATTAATTTTATGGACGATTACTTTGCGTGTTTGACTAAGTTAGAGAAGTTCGAACCAGGTTACTTCAAACTCAAATATGCCCTGGTAGAAGCAGTATTTTCGATCTTGATAGCCATCACTGGAATATGGCTGATAGTCGTGCTGGTAAAATACGTGACGAAGAAGAAGCCCCTAAAACCGGTCCTCTCAGGATCGACTACCGCATGGTCTGGCCTGTACAGATTCTCCAAGGCTGAGATTGAGAATGCCATAAATTATGGACCTGAAAGAAAGAACCTCGGACGAGGAAGTGCCGGTCATGTTTATAAAGGGGTTCTTCCTAGTGGACAAGTTGTGGCCGTTAAGCACATAAACAAGAGTAACATATCTGATTCTTTTACAAGAGAAGTGGAAGGGCTTTCAAGGATTCGACACCCGAACTTGGTTTGCCTCTTTGGTTGCTGTGTTGAAGGCGGCGAGCAATATCTTGTGTATGAATATTGCTCATCAGGGAATCTAGCTCAACATCTCCTAAGAAACGACCCTGTGTTATCATGGGAAAGAAGGGTTAAGATTCTCAGAGACTGTGCACTTGCTTTGAGGTATCTCCACCACTATATTGATGGCTGCATAGTTCACAGAGATATCAAGCTTACAAACATCCTTTTGACTGGGAACATGGACCCCAAGCTATCTGATTTTGGGTTGGCAAAGATGTTGGGGATGGAGGAGAGCAAAGTATTTACAGATGTTAGAGGAACAATAGGGTATATGGATCCAGAGTACATGACCAATGCCAAATTAACCTGTGCCAGTGATGTCTATAGTTTTGGTATCGTTTGCCTGCAACTTCTGTCAGGCCAAAAAGTATTTGAGCTTGATCTTGATGCGAGAGATCAACTCACGAGAAAGGCAAAGGATGTGAGCATGAACAAGCGTCCACCCGAGGATCTTGAAGATCCAAGACTAAACGGAAATGTCAACAAGGTAGACTTTGAATCGATTCTACAAATTGCAGTACTTTGTGTTGCCAAATCAAGCAAGGGTCGCCCTACGATTGACGTTGTCTTTGAAGAGATGGAAAAGGCTTGGAAGAACACTGCTGCTGAAATGAAGGCACAGAGAGGGGTGAGTTCATCAGCCACACCATTGTCTTTATCTTCAGGAGTGTTATCAGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase

Protein Analysis

597

Amino Acids

65.84

Weight (kDa)

8.51

Isoelectric Point (pI)

33.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SPARK	PF19160	27 - 192	2.1e-11	SPARK
Pkinase	PF00069	301 - 559	1.4e-46	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	301 - 495	1.9e-41	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015641)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g01140
malus_domestica	MD04G1236100.v1.1 MD12G1255100.v1.1
prunus_persica	Prupe.6G356000_v2.0.a1
pyrus_communis	pycom04g20980 pycom12g23380
rosa_chinensis	RchiOBHm_Chr3g0448671
rosa_laevigata	RLG00000025880
rosa_multiflora	Rmu_sc0003116.1_g000033
rosa_roxburghii	Rroxscaffold_6G00426940
rosa_rugosa	Rorug02G0615200
rosa_samantha	Rh3AG014000 Rh3BG013800 Rh3CG012900 Rh3DG014600
rosa_wichuraiana	Rw3G001040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	936
AccI	GTMKAC	1 cut(s)	1599
AciI	CCGC	5 cut(s)	261, 576, 584, 831, 1083
AclWI	GGATC	5 cut(s)	829, 1379, 1392, 1562, 1566
AcoI	YGGCCR	1 cut(s)	966
AcsI	RAATTY	1 cut(s)	565
AcuI	CTGAAG	1 cut(s)	1755
AfaI	GTAC	5 cut(s)	416, 490, 848, 1394, 1629
AfiI	CCNNNNNNNGG	2 cut(s)	808, 1051
AflII	CTTAAG	1 cut(s)	509
AflIII	ACRYGT	1 cut(s)	321
AgeI	ACCGGT	1 cut(s)	808
AgsI	TTSAA	8 cut(s)	430, 469, 697, 1032, 1079, 1565, 1607, 1682
AjiI	CACGTC	1 cut(s)	322
AjnI	CCWGG	2 cut(s)	685, 711
AluBI	AGCT	6 cut(s)	157, 180, 1130, 1261, 1300, 1486
AluI	AGCT	6 cut(s)	157, 180, 1130, 1261, 1300, 1486
Alw21I	GWGCWC	2 cut(s)	213, 1201
Alw26I	GTCTC	2 cut(s)	228, 1185
Alw44I	GTGCAC	1 cut(s)	1197
AlwI	GGATC	5 cut(s)	829, 1379, 1392, 1562, 1566
AlwNI	CAGNNNCTG	2 cut(s)	372, 1194
Ama87I	CYCGRG	1 cut(s)	1553
AoxI	GGCC	4 cut(s)	234, 841, 966, 1468
ApaLI	GTGCAC	1 cut(s)	1197
ApeKI	GCWGC	5 cut(s)	363, 366, 602, 1236, 1712
ApoI	RAATTY	1 cut(s)	565
ArsI	GACNNNNNNTTYG	4 cut(s)	635, 667, 1661, 1693
AseI	ATTAAT	1 cut(s)	633
AsiGI	ACCGGT	1 cut(s)	808
Asp700I	GAANNNNTTC	1 cut(s)	1611
AspLEI	GCGC	1 cut(s)	377
AspS9I	GGNCC	3 cut(s)	811, 890, 1291
AsuC2I	CCSGG	1 cut(s)	607
AsuHPI	GGTGA	4 cut(s)	13, 60, 205, 1750
AsuII	TTCGAA	1 cut(s)	681
AvaI	CYCGRG	1 cut(s)	1553
AvaII	GGWCC	3 cut(s)	811, 890, 1291
BaeGI	GKGCMC	1 cut(s)	1201
BamHI	GGATCC	1 cut(s)	1384
BauI	CACGAG	1 cut(s)	1513
Bbv12I	GWGCWC	2 cut(s)	213, 1201
BbvI	GCAGC	5 cut(s)	375, 378, 614, 1223, 1699
BccI	CCATC	5 cut(s)	542, 752, 1226, 1327, 1681
BceAI	ACGGC	1 cut(s)	953
BcgI	CGANNNNNNTGC	4 cut(s)	635, 669, 711, 745
BciT130I	CCWGG	2 cut(s)	687, 713
BcnI	CCSGG	1 cut(s)	607
BcoDI	GTCTC	2 cut(s)	228, 1185
BfaI	CTAG	2 cut(s)	951, 1127
BfmI	CTRYAG	1 cut(s)	1432
BfrI	CTTAAG	1 cut(s)	509
BisI	GCNGC	7 cut(s)	364, 367, 585, 603, 1084, 1237, 1713
BlsI	GCNGC	7 cut(s)	365, 368, 586, 604, 1085, 1238, 1714
BmcAI	AGTACT	1 cut(s)	1629
Bme1390I	CCNGG	3 cut(s)	607, 687, 713
Bme18I	GGWCC	3 cut(s)	811, 890, 1291
BmeT110I	CYCGRG	1 cut(s)	1553
BmgBI	CACGTC	1 cut(s)	322
BmgT120I	GGNCC	3 cut(s)	811, 890, 1291
BmiI	GGNNCC	3 cut(s)	304, 1293, 1386
BmrFI	CCNGG	3 cut(s)	607, 687, 713
BmrI	ACTGGG	2 cut(s)	138, 1290
BmsI	GCATC	1 cut(s)	1486
BmuI	ACTGGG	2 cut(s)	138, 1290
BplI	GAGNNNNNCTC	2 cut(s)	1494, 1526
Bpu10I	CCTNAGC	1 cut(s)	82
Bpu14I	TTCGAA	1 cut(s)	681
BpuEI	CTTGAG	2 cut(s)	210, 426
BpuMI	CCSGG	1 cut(s)	607
Bsa29I	ATCGAT	1 cut(s)	1610
BsaAI	YACGTR	1 cut(s)	784
BsaBI	GATNNNNATC	1 cut(s)	743
BsaJI	CCNNGG	5 cut(s)	231, 711, 858, 907, 1554
BsaWI	WCCGGW	1 cut(s)	808
BsaXI	ACNNNNNCTCC	2 cut(s)	839, 869
Bsc4I	CCNNNNNNNGG	2 cut(s)	808, 1051
Bse118I	RCCGGY	2 cut(s)	808, 923
Bse1I	ACTGG	5 cut(s)	133, 304, 754, 1285, 1422
Bse3DI	GCAATG	2 cut(s)	33, 457
Bse8I	GATNNNNATC	1 cut(s)	743
BseBI	CCWGG	2 cut(s)	687, 713
BseCI	ATCGAT	1 cut(s)	1610
BseDI	CCNNGG	5 cut(s)	231, 711, 858, 907, 1554
BseGI	GGATG	5 cut(s)	107, 283, 1269, 1338, 1534
BseJI	GATNNNNATC	1 cut(s)	743
BseLI	CCNNNNNNNGG	2 cut(s)	808, 1051
BseMI	GCAATG	2 cut(s)	33, 457
BseMII	CTCAG	4 cut(s)	96, 831, 855, 1201
BseNI	ACTGG	5 cut(s)	133, 304, 754, 1285, 1422
BseRI	GAGGAG	1 cut(s)	1352
BseSI	GKGCMC	1 cut(s)	1201
BseXI	GCAGC	5 cut(s)	375, 378, 614, 1223, 1699
BsgI	GTGCAG	1 cut(s)	280
BshFI	GGCC	4 cut(s)	236, 843, 968, 1470
BshTI	ACCGGT	1 cut(s)	808
BshVI	ATCGAT	1 cut(s)	1610
BsiHKAI	GWGCWC	2 cut(s)	213, 1201
BsiHKCI	CYCGRG	1 cut(s)	1553
BsiSI	CCGG	3 cut(s)	606, 809, 924
BslFI	GGGAC	1 cut(s)	188
BslI	CCNNNNNNNGG	2 cut(s)	808, 1051
BsmAI	GTCTC	2 cut(s)	228, 1185
BsmFI	GGGAC	1 cut(s)	188
BsmI	GAATGC	2 cut(s)	140, 880
BsnI	GGCC	4 cut(s)	236, 843, 968, 1470
BsoBI	CYCGRG	1 cut(s)	1553
Bsp119I	TTCGAA	1 cut(s)	681
Bsp1286I	GDGCHC	2 cut(s)	213, 1201
Bsp1407I	TGTACA	1 cut(s)	846
Bsp143I	GATC	9 cut(s)	76, 331, 732, 821, 1384, 1489, 1504, 1558, 1567
BspACI	CCGC	5 cut(s)	261, 576, 584, 831, 1083
BspANI	GGCC	4 cut(s)	236, 843, 968, 1470
BspCNI	CTCAG	4 cut(s)	95, 830, 856, 1200
BspDI	ATCGAT	1 cut(s)	1610
BspLI	GGNNCC	3 cut(s)	304, 1293, 1386
BspPI	GGATC	5 cut(s)	829, 1379, 1392, 1562, 1566
BspT104I	TTCGAA	1 cut(s)	681
BspTI	CTTAAG	1 cut(s)	509
BsrDI	GCAATG	2 cut(s)	33, 457
BsrFI	RCCGGY	2 cut(s)	808, 923
BsrGI	TGTACA	1 cut(s)	846
BsrI	ACTGG	5 cut(s)	133, 304, 754, 1285, 1422
BssAI	RCCGGY	2 cut(s)	808, 923
BssECI	CCNNGG	5 cut(s)	231, 711, 858, 907, 1554
BssMI	GATC	9 cut(s)	76, 331, 732, 821, 1384, 1489, 1504, 1558, 1567
BssSI	CACGAG	1 cut(s)	1513
BssT1I	CCWWGG	2 cut(s)	231, 858
Bst2BI	CACGAG	1 cut(s)	1513
Bst2UI	CCWGG	2 cut(s)	687, 713
Bst4CI	ACNGT	1 cut(s)	1196
Bst6I	CTCTTC	1 cut(s)	1677
BstAFI	CTTAAG	1 cut(s)	509
BstAPI	GCANNNNNTGC	1 cut(s)	372
BstAUI	TGTACA	1 cut(s)	846
BstBAI	YACGTR	1 cut(s)	784
BstBI	TTCGAA	1 cut(s)	681
BstC8I	GCNNGC	2 cut(s)	1088, 1454
BstDEI	CTNAG	6 cut(s)	82, 666, 817, 864, 1142, 1187
BstF5I	GGATG	5 cut(s)	107, 283, 1269, 1338, 1534
BstHHI	GCGC	1 cut(s)	377
BstKTI	GATC	9 cut(s)	79, 334, 735, 824, 1387, 1492, 1507, 1561, 1570
BstMAI	GTCTC	2 cut(s)	228, 1185
BstMBI	GATC	9 cut(s)	76, 331, 732, 821, 1384, 1489, 1504, 1558, 1567
BstMWI	GCNNNNNNNGC	3 cut(s)	242, 372, 1656
BstNI	CCWGG	2 cut(s)	687, 713
BstSCI	CCNGG	3 cut(s)	605, 685, 711
BstSFI	CTRYAG	1 cut(s)	1432
BstSLI	GKGCMC	1 cut(s)	1201
BstV1I	GCAGC	5 cut(s)	375, 378, 614, 1223, 1699
BstX2I	RGATCY	3 cut(s)	1384, 1558, 1567
BstYI	RGATCY	3 cut(s)	1384, 1558, 1567
Bsu15I	ATCGAT	1 cut(s)	1610
BsuRI	GGCC	4 cut(s)	236, 843, 968, 1470
BsuTUI	ATCGAT	1 cut(s)	1610
BtrI	CACGTC	1 cut(s)	322
BtsCI	GGATG	5 cut(s)	107, 283, 1269, 1338, 1534
BtsI	GCAGTG	1 cut(s)	1707
BtsIMutI	CAGTG	5 cut(s)	297, 341, 747, 1429, 1707
Cac8I	GCNNGC	2 cut(s)	1088, 1454
CaiI	CAGNNNCTG	2 cut(s)	372, 1194
CfoI	GCGC	1 cut(s)	377
Cfr10I	RCCGGY	2 cut(s)	808, 923
Cfr13I	GGNCC	3 cut(s)	811, 890, 1291
ClaI	ATCGAT	1 cut(s)	1610
CseI	GACGC	2 cut(s)	157, 1535
CsiI	ACCWGGT	1 cut(s)	685
Csp6I	GTAC	5 cut(s)	415, 489, 847, 1393, 1628
CspAI	ACCGGT	1 cut(s)	808
CspCI	CAANNNNNGTGG	4 cut(s)	28, 63, 999, 1034
CviAII	CATG	6 cut(s)	834, 929, 1164, 1288, 1396, 1537
CviQI	GTAC	5 cut(s)	415, 489, 847, 1393, 1628
DdeI	CTNAG	6 cut(s)	82, 666, 817, 864, 1142, 1187
DpnI	GATC	9 cut(s)	78, 333, 734, 823, 1386, 1491, 1506, 1560, 1569
DpnII	GATC	9 cut(s)	76, 331, 732, 821, 1384, 1489, 1504, 1558, 1567
DraI	TTTAAA	1 cut(s)	250
EaeI	YGGCCR	1 cut(s)	966
Eam1104I	CTCTTC	1 cut(s)	1677
EarI	CTCTTC	1 cut(s)	1677
Eco130I	CCWWGG	2 cut(s)	231, 858
Eco32I	GATATC	1 cut(s)	1255
Eco47I	GGWCC	3 cut(s)	811, 890, 1291
Eco57I	CTGAAG	1 cut(s)	1755
Eco88I	CYCGRG	1 cut(s)	1553
EcoRII	CCWGG	2 cut(s)	685, 711
EcoRV	GATATC	1 cut(s)	1255
EcoT14I	CCWWGG	2 cut(s)	231, 858
EcoT22I	ATGCAT	1 cut(s)	140
ErhI	CCWWGG	2 cut(s)	231, 858
FaeI	CATG	6 cut(s)	837, 932, 1167, 1291, 1399, 1540
FalI	AAGNNNNNCTT	4 cut(s)	930, 962, 1586, 1618
FaqI	GGGAC	1 cut(s)	188
FatI	CATG	6 cut(s)	833, 928, 1163, 1287, 1395, 1536
FauNDI	CATATG	1 cut(s)	572
FblI	GTMKAC	1 cut(s)	1599
Fnu4HI	GCNGC	7 cut(s)	364, 367, 585, 603, 1084, 1237, 1713
FokI	GGATG	5 cut(s)	94, 290, 1256, 1345, 1541
Fsp4HI	GCNGC	7 cut(s)	364, 367, 585, 603, 1084, 1237, 1713
FspBI	CTAG	2 cut(s)	951, 1127
GlaI	GCGC	1 cut(s)	376
GluI	GCNGC	7 cut(s)	364, 367, 585, 603, 1084, 1237, 1713
HaeIII	GGCC	4 cut(s)	236, 843, 968, 1470
HapII	CCGG	3 cut(s)	606, 809, 924
HgaI	GACGC	2 cut(s)	157, 1535
HhaI	GCGC	1 cut(s)	377
Hin1II	CATG	6 cut(s)	837, 932, 1167, 1291, 1399, 1540
Hin6I	GCGC	1 cut(s)	375
HinP1I	GCGC	1 cut(s)	375
HincII	GTYRAC	1 cut(s)	1591
HindII	GTYRAC	1 cut(s)	1591
HindIII	AAGCTT	1 cut(s)	1259
HinfI	GANTC	7 cut(s)	852, 1001, 1036, 1123, 1183, 1607, 1612
HpaII	CCGG	3 cut(s)	606, 809, 924
HphI	GGTGA	4 cut(s)	13, 60, 205, 1750
Hpy166II	GTNNAC	8 cut(s)	385, 415, 956, 1199, 1246, 1550, 1591, 1600
Hpy188I	TCNGA	6 cut(s)	277, 540, 911, 1000, 1190, 1306
Hpy188III	TCNNGA	9 cut(s)	84, 317, 736, 819, 1388, 1493, 1513, 1562, 1773
Hpy8I	GTNNAC	8 cut(s)	385, 415, 956, 1199, 1246, 1550, 1591, 1600
HpyAV	CCTTC	6 cut(s)	247, 403, 1016, 1073, 1167, 1717
HpyCH4III	ACNGT	1 cut(s)	1196
HpyCH4IV	ACGT	4 cut(s)	321, 381, 783, 1671
HpyCH4V	TGCA	7 cut(s)	138, 297, 602, 1199, 1239, 1456, 1625
HpyF10VI	GCNNNNNNNGC	3 cut(s)	242, 372, 1656
HpyF3I	CTNAG	6 cut(s)	82, 666, 817, 864, 1142, 1187
HpySE526I	ACGT	4 cut(s)	321, 381, 783, 1671
Hsp92II	CATG	6 cut(s)	837, 932, 1167, 1291, 1399, 1540
HspAI	GCGC	1 cut(s)	375
Kzo9I	GATC	9 cut(s)	76, 331, 732, 821, 1384, 1489, 1504, 1558, 1567
LmnI	GCTCC	1 cut(s)	308
Lsp1109I	GCAGC	5 cut(s)	375, 378, 614, 1223, 1699
LweI	GCATC	1 cut(s)	1486
MabI	ACCWGGT	1 cut(s)	685
MaeI	CTAG	2 cut(s)	951, 1127
MaeII	ACGT	4 cut(s)	321, 381, 783, 1671
MaeIII	GTNAC	3 cut(s)	689, 784, 989
MalI	GATC	9 cut(s)	78, 333, 734, 823, 1386, 1491, 1506, 1560, 1569
MboI	GATC	9 cut(s)	76, 331, 732, 821, 1384, 1489, 1504, 1558, 1567
MboII	GAAGA	8 cut(s)	553, 802, 805, 938, 1577, 1694, 1714, 1761
MflI	RGATCY	3 cut(s)	1384, 1558, 1567
MhlI	GDGCHC	2 cut(s)	213, 1201
MluCI	AATT	7 cut(s)	504, 565, 619, 634, 883, 1409, 1620
Mph1103I	ATGCAT	1 cut(s)	140
MroXI	GAANNNNTTC	1 cut(s)	1611
MseI	TTAA	9 cut(s)	249, 345, 399, 503, 510, 633, 972, 1179, 1412
MspA1I	CMGCKG	1 cut(s)	180
MspCI	CTTAAG	1 cut(s)	509
MspI	CCGG	3 cut(s)	606, 809, 924
MspR9I	CCNGG	3 cut(s)	607, 687, 713
Mva1269I	GAATGC	2 cut(s)	140, 880
MvaI	CCWGG	2 cut(s)	687, 713
MwoI	GCNNNNNNNGC	3 cut(s)	242, 372, 1656
NciI	CCSGG	1 cut(s)	607
NdeI	CATATG	1 cut(s)	572
NdeII	GATC	9 cut(s)	76, 331, 732, 821, 1384, 1489, 1504, 1558, 1567
NlaIII	CATG	6 cut(s)	837, 932, 1167, 1291, 1399, 1540
NlaIV	GGNNCC	3 cut(s)	304, 1293, 1386
NmuCI	GTSAC	1 cut(s)	784
NsiI	ATGCAT	1 cut(s)	140
NspV	TTCGAA	1 cut(s)	681
PcsI	WCGNNNNNNNCGW	1 cut(s)	327
PctI	GAATGC	2 cut(s)	140, 880
PdmI	GAANNNNTTC	1 cut(s)	1611
PfeI	GAWTC	7 cut(s)	852, 1001, 1036, 1123, 1183, 1607, 1612
PflFI	GACNNNGTC	1 cut(s)	1673
PinAI	ACCGGT	1 cut(s)	808
PkrI	GCNGC	7 cut(s)	365, 368, 586, 604, 1085, 1238, 1714
Ppu21I	YACGTR	1 cut(s)	784
PshBI	ATTAAT	1 cut(s)	633
PsiI	TTATAA	1 cut(s)	936
Psp6I	CCWGG	2 cut(s)	685, 711
PspGI	CCWGG	2 cut(s)	685, 711
PspN4I	GGNNCC	3 cut(s)	304, 1293, 1386
PspPI	GGNCC	3 cut(s)	811, 890, 1291
PstNI	CAGNNNCTG	2 cut(s)	372, 1194
PsuI	RGATCY	3 cut(s)	1384, 1558, 1567
PsyI	GACNNNGTC	1 cut(s)	1673
PvuII	CAGCTG	1 cut(s)	180
RsaI	GTAC	5 cut(s)	416, 490, 848, 1394, 1629
RsaNI	GTAC	5 cut(s)	415, 489, 847, 1393, 1628
SaqAI	TTAA	9 cut(s)	249, 345, 399, 503, 510, 633, 972, 1179, 1412
SatI	GCNGC	7 cut(s)	364, 367, 585, 603, 1084, 1237, 1713
Sau3AI	GATC	9 cut(s)	76, 331, 732, 821, 1384, 1489, 1504, 1558, 1567
Sau96I	GGNCC	3 cut(s)	811, 890, 1291
ScaI	AGTACT	1 cut(s)	1629
ScrFI	CCNGG	3 cut(s)	607, 687, 713
SduI	GDGCHC	2 cut(s)	213, 1201
SexAI	ACCWGGT	1 cut(s)	685
SfaNI	GCATC	1 cut(s)	1486
SfcI	CTRYAG	1 cut(s)	1432
SfuI	TTCGAA	1 cut(s)	681
SinI	GGWCC	3 cut(s)	811, 890, 1291
SmlI	CTYRAG	3 cut(s)	225, 441, 509
SmoI	CTYRAG	3 cut(s)	225, 441, 509
Sse9I	AATT	7 cut(s)	504, 565, 619, 634, 883, 1409, 1620
SsiI	CCGC	5 cut(s)	261, 576, 584, 831, 1083
SspI	AATATT	2 cut(s)	533, 1109
SspMI	CTAG	2 cut(s)	951, 1127
StyD4I	CCNGG	3 cut(s)	605, 685, 711
StyI	CCWWGG	2 cut(s)	231, 858
TaaI	ACNGT	1 cut(s)	1196
TaiI	ACGT	4 cut(s)	324, 384, 786, 1674
TaqI	TCGA	7 cut(s)	202, 629, 681, 731, 824, 1039, 1610
TasI	AATT	7 cut(s)	504, 565, 619, 634, 883, 1409, 1620
TatI	WGTACW	3 cut(s)	846, 1392, 1627
TauI	GCSGC	2 cut(s)	587, 1086
TfiI	GAWTC	7 cut(s)	852, 1001, 1036, 1123, 1183, 1607, 1612
Tru1I	TTAA	9 cut(s)	249, 345, 399, 503, 510, 633, 972, 1179, 1412
Tru9I	TTAA	9 cut(s)	249, 345, 399, 503, 510, 633, 972, 1179, 1412
TscAI	CASTG	5 cut(s)	304, 341, 754, 1429, 1714
TseFI	GTSAC	1 cut(s)	784
TseI	GCWGC	5 cut(s)	363, 366, 602, 1236, 1712
Tsp45I	GTSAC	1 cut(s)	784
TspDTI	ATGAA	6 cut(s)	22, 447, 1119, 1553, 1734, 1736
TspGWI	ACGGA	1 cut(s)	1596
TspRI	CASTG	5 cut(s)	304, 341, 754, 1429, 1714
Tth111I	GACNNNGTC	1 cut(s)	1673
Vha464I	CTTAAG	1 cut(s)	509
VneI	GTGCAC	1 cut(s)	1197
VpaK11BI	GGWCC	3 cut(s)	811, 890, 1291
VspI	ATTAAT	1 cut(s)	633
XapI	RAATTY	1 cut(s)	565
XcmI	CCANNNNNNNNNTGG	2 cut(s)	577, 1229
XmiI	GTMKAC	1 cut(s)	1599
XmnI	GAANNNNTTC	1 cut(s)	1611
XspI	CTAG	2 cut(s)	951, 1127
ZrmI	AGTACT	1 cut(s)	1629
Zsp2I	ATGCAT	1 cut(s)	140

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.