RNA recognition motif
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G48920 AT3G18610 AT3G18610 AT3G18610 |
| malus_domestica | MD13G1006400.v1.1 MD16G1001600.v1.1 |
| prunus_persica | Prupe.1G346800_v2.0.a1 Prupe.1G346800_v2.0.a1 Prupe.1G346800_v2.0.a1 Prupe.1G346800_v2.0.a1 |
| pyrus_communis | pycom13g00530 pycom16g00400 |
| rosa_multiflora | Rmu_co8373157.1_g000001 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1561 |
| Acc36I | ACCTGC | 3 cut(s) | 274, 943, 1561 |
| Acc65I | GGTACC | 1 cut(s) | 716 |
| AccB1I | GGYRCC | 2 cut(s) | 716, 1472 |
| AccBSI | CCGCTC | 1 cut(s) | 284 |
| AccII | CGCG | 1 cut(s) | 1335 |
| AciI | CCGC | 7 cut(s) | 24, 45, 282, 735, 1335, 1512, 1668 |
| AclWI | GGATC | 2 cut(s) | 1136, 1368 |
| AcsI | RAATTY | 3 cut(s) | 1093, 1535, 1550 |
| AcuI | CTGAAG | 3 cut(s) | 600, 618, 1212 |
| AcyI | GRCGYC | 1 cut(s) | 1473 |
| AdeI | CACNNNGTG | 1 cut(s) | 1337 |
| AfaI | GTAC | 2 cut(s) | 718, 1606 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 71, 493, 511, 1075, 1384, 1482, 1763 |
| AflIII | ACRYGT | 1 cut(s) | 1171 |
| AgsI | TTSAA | 8 cut(s) | 182, 657, 780, 873, 1102, 1159, 1214, 1522 |
| AhlI | ACTAGT | 1 cut(s) | 212 |
| AjiI | CACGTC | 4 cut(s) | 256, 967, 1697, 1730 |
| AjnI | CCWGG | 2 cut(s) | 1610, 1756 |
| AleI | CACNNNNGTG | 1 cut(s) | 965 |
| Alw21I | GWGCWC | 2 cut(s) | 590, 1403 |
| Alw26I | GTCTC | 3 cut(s) | 203, 436, 1460 |
| AlwI | GGATC | 2 cut(s) | 1136, 1368 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 305, 545 |
| AoxI | GGCC | 3 cut(s) | 159, 400, 532 |
| ApoI | RAATTY | 3 cut(s) | 1093, 1535, 1550 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1097 |
| Asp718I | GGTACC | 1 cut(s) | 716 |
| AspLEI | GCGC | 3 cut(s) | 125, 157, 1475 |
| AspS9I | GGNCC | 3 cut(s) | 401, 533, 1328 |
| AsuHPI | GGTGA | 4 cut(s) | 821, 1286, 1442, 1607 |
| AvaII | GGWCC | 1 cut(s) | 1328 |
| BanI | GGYRCC | 2 cut(s) | 716, 1472 |
| BanII | GRGCYC | 2 cut(s) | 590, 1403 |
| BauI | CACGAG | 1 cut(s) | 1263 |
| BbsI | GAAGAC | 1 cut(s) | 234 |
| Bbv12I | GWGCWC | 2 cut(s) | 590, 1403 |
| BccI | CCATC | 6 cut(s) | 544, 766, 800, 1457, 1480, 1679 |
| BciT130I | CCWGG | 2 cut(s) | 1612, 1758 |
| BcoDI | GTCTC | 3 cut(s) | 203, 436, 1460 |
| BcuI | ACTAGT | 1 cut(s) | 212 |
| BfaI | CTAG | 5 cut(s) | 213, 327, 564, 1532, 1748 |
| BfmI | CTRYAG | 2 cut(s) | 48, 516 |
| BfoI | RGCGCY | 1 cut(s) | 1476 |
| BfuAI | ACCTGC | 3 cut(s) | 274, 943, 1561 |
| Bme1390I | CCNGG | 2 cut(s) | 1612, 1758 |
| Bme18I | GGWCC | 1 cut(s) | 1328 |
| BmgBI | CACGTC | 4 cut(s) | 256, 967, 1697, 1730 |
| BmgT120I | GGNCC | 3 cut(s) | 401, 533, 1328 |
| BmiI | GGNNCC | 6 cut(s) | 42, 264, 718, 834, 1329, 1474 |
| BmrFI | CCNGG | 2 cut(s) | 1612, 1758 |
| BmsI | GCATC | 5 cut(s) | 82, 970, 1096, 1349, 1498 |
| BpiI | GAAGAC | 1 cut(s) | 234 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1298, 1330 |
| BpuEI | CTTGAG | 1 cut(s) | 849 |
| BsaHI | GRCGYC | 1 cut(s) | 1473 |
| BsaJI | CCNNGG | 3 cut(s) | 222, 1378, 1610 |
| BsaWI | WCCGGW | 1 cut(s) | 1298 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 71, 493, 511, 1075, 1384, 1482, 1763 |
| Bse118I | RCCGGY | 1 cut(s) | 511 |
| Bse1I | ACTGG | 3 cut(s) | 906, 1474, 1635 |
| BseBI | CCWGG | 2 cut(s) | 1612, 1758 |
| BseDI | CCNNGG | 3 cut(s) | 222, 1378, 1610 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 71, 493, 511, 1075, 1384, 1482, 1763 |
| BseMII | CTCAG | 4 cut(s) | 87, 459, 981, 1152 |
| BseNI | ACTGG | 3 cut(s) | 906, 1474, 1635 |
| BseRI | GAGGAG | 7 cut(s) | 239, 242, 377, 652, 695, 842, 911 |
| BseYI | CCCAGC | 1 cut(s) | 1012 |
| Bsh1236I | CGCG | 1 cut(s) | 1335 |
| BshFI | GGCC | 3 cut(s) | 161, 402, 534 |
| BshNI | GGYRCC | 2 cut(s) | 716, 1472 |
| BsiHKAI | GWGCWC | 2 cut(s) | 590, 1403 |
| BsiSI | CCGG | 2 cut(s) | 512, 1299 |
| BslFI | GGGAC | 2 cut(s) | 1341, 1721 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 71, 493, 511, 1075, 1384, 1482, 1763 |
| BsmAI | GTCTC | 3 cut(s) | 203, 436, 1460 |
| BsmFI | GGGAC | 2 cut(s) | 1341, 1721 |
| BsnI | GGCC | 3 cut(s) | 161, 402, 534 |
| Bsp1286I | GDGCHC | 2 cut(s) | 590, 1403 |
| Bsp143I | GATC | 5 cut(s) | 928, 1141, 1255, 1373, 1392 |
| BspACI | CCGC | 7 cut(s) | 24, 45, 282, 735, 1335, 1512, 1668 |
| BspANI | GGCC | 3 cut(s) | 161, 402, 534 |
| BspCNI | CTCAG | 4 cut(s) | 88, 458, 982, 1151 |
| BspFNI | CGCG | 1 cut(s) | 1335 |
| BspLI | GGNNCC | 6 cut(s) | 42, 264, 718, 834, 1329, 1474 |
| BspMAI | CTGCAG | 1 cut(s) | 520 |
| BspMI | ACCTGC | 3 cut(s) | 274, 943, 1561 |
| BspPI | GGATC | 2 cut(s) | 1136, 1368 |
| BspT107I | GGYRCC | 2 cut(s) | 716, 1472 |
| BsrBI | CCGCTC | 1 cut(s) | 284 |
| BsrFI | RCCGGY | 1 cut(s) | 511 |
| BsrI | ACTGG | 3 cut(s) | 906, 1474, 1635 |
| BssAI | RCCGGY | 1 cut(s) | 511 |
| BssECI | CCNNGG | 3 cut(s) | 222, 1378, 1610 |
| BssMI | GATC | 5 cut(s) | 928, 1141, 1255, 1373, 1392 |
| BssNI | GRCGYC | 1 cut(s) | 1473 |
| BssSI | CACGAG | 1 cut(s) | 1263 |
| BssT1I | CCWWGG | 1 cut(s) | 1378 |
| Bst2BI | CACGAG | 1 cut(s) | 1263 |
| Bst2UI | CCWGG | 2 cut(s) | 1612, 1758 |
| Bst4CI | ACNGT | 2 cut(s) | 730, 1712 |
| Bst6I | CTCTTC | 5 cut(s) | 576, 597, 915, 1297, 1572 |
| BstACI | GRCGYC | 1 cut(s) | 1473 |
| BstC8I | GCNNGC | 4 cut(s) | 159, 513, 1111, 1516 |
| BstDEI | CTNAG | 9 cut(s) | 96, 381, 393, 445, 525, 744, 990, 1038, 1138 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 1382, 1761 |
| BstFNI | CGCG | 1 cut(s) | 1335 |
| BstH2I | RGCGCY | 1 cut(s) | 1476 |
| BstHHI | GCGC | 3 cut(s) | 125, 157, 1475 |
| BstKTI | GATC | 5 cut(s) | 931, 1144, 1258, 1376, 1395 |
| BstMAI | GTCTC | 3 cut(s) | 203, 436, 1460 |
| BstMBI | GATC | 5 cut(s) | 928, 1141, 1255, 1373, 1392 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 12, 314, 521, 740, 1196, 1205, 1668 |
| BstNI | CCWGG | 2 cut(s) | 1612, 1758 |
| BstNSI | RCATGY | 1 cut(s) | 1175 |
| BstSCI | CCNGG | 2 cut(s) | 1610, 1756 |
| BstSFI | CTRYAG | 2 cut(s) | 48, 516 |
| BstUI | CGCG | 1 cut(s) | 1335 |
| BstV2I | GAAGAC | 1 cut(s) | 234 |
| BstX2I | RGATCY | 2 cut(s) | 1141, 1373 |
| BstYI | RGATCY | 2 cut(s) | 1141, 1373 |
| BsuRI | GGCC | 3 cut(s) | 161, 402, 534 |
| BtgZI | GCGATG | 1 cut(s) | 474 |
| BtrI | CACGTC | 4 cut(s) | 256, 967, 1697, 1730 |
| BtsI | GCAGTG | 1 cut(s) | 337 |
| BtsIMutI | CAGTG | 3 cut(s) | 337, 960, 1717 |
| BveI | ACCTGC | 3 cut(s) | 274, 943, 1561 |
| Cac8I | GCNNGC | 4 cut(s) | 159, 513, 1111, 1516 |
| CaiI | CAGNNNCTG | 2 cut(s) | 305, 545 |
| CfoI | GCGC | 3 cut(s) | 125, 157, 1475 |
| Cfr10I | RCCGGY | 1 cut(s) | 511 |
| Cfr13I | GGNCC | 3 cut(s) | 401, 533, 1328 |
| CseI | GACGC | 1 cut(s) | 1051 |
| Csp6I | GTAC | 2 cut(s) | 717, 1605 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 16, 51 |
| CviAII | CATG | 2 cut(s) | 1172, 1495 |
| CviQI | GTAC | 2 cut(s) | 717, 1605 |
| DdeI | CTNAG | 9 cut(s) | 96, 381, 393, 445, 525, 744, 990, 1038, 1138 |
| DinI | GGCGCC | 1 cut(s) | 1474 |
| DpnI | GATC | 5 cut(s) | 930, 1143, 1257, 1375, 1394 |
| DpnII | GATC | 5 cut(s) | 928, 1141, 1255, 1373, 1392 |
| DraIII | CACNNNGTG | 1 cut(s) | 1337 |
| Eam1104I | CTCTTC | 5 cut(s) | 576, 597, 915, 1297, 1572 |
| EarI | CTCTTC | 5 cut(s) | 576, 597, 915, 1297, 1572 |
| EciI | GGCGGA | 1 cut(s) | 13 |
| Ecl136II | GAGCTC | 2 cut(s) | 588, 1401 |
| Eco130I | CCWWGG | 1 cut(s) | 1378 |
| Eco24I | GRGCYC | 2 cut(s) | 590, 1403 |
| Eco32I | GATATC | 2 cut(s) | 1126, 1246 |
| Eco47I | GGWCC | 1 cut(s) | 1328 |
| Eco53kI | GAGCTC | 2 cut(s) | 588, 1401 |
| Eco57I | CTGAAG | 3 cut(s) | 600, 618, 1212 |
| EcoICRI | GAGCTC | 2 cut(s) | 588, 1401 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 1382, 1761 |
| EcoRII | CCWGG | 2 cut(s) | 1610, 1756 |
| EcoRV | GATATC | 2 cut(s) | 1126, 1246 |
| EcoT14I | CCWWGG | 1 cut(s) | 1378 |
| EcoT38I | GRGCYC | 2 cut(s) | 590, 1403 |
| EgeI | GGCGCC | 1 cut(s) | 1474 |
| EheI | GGCGCC | 1 cut(s) | 1474 |
| ErhI | CCWWGG | 1 cut(s) | 1378 |
| FaeI | CATG | 2 cut(s) | 1175, 1498 |
| FaiI | YATR | 8 cut(s) | 152, 416, 800, 1173, 1290, 1318, 1464, 1496 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1270, 1302 |
| FaqI | GGGAC | 2 cut(s) | 1341, 1721 |
| FatI | CATG | 2 cut(s) | 1171, 1494 |
| FauI | CCCGC | 1 cut(s) | 52 |
| FriOI | GRGCYC | 2 cut(s) | 590, 1403 |
| FspBI | CTAG | 5 cut(s) | 213, 327, 564, 1532, 1748 |
| GlaI | GCGC | 3 cut(s) | 124, 156, 1474 |
| GsaI | CCCAGC | 1 cut(s) | 1016 |
| HaeII | RGCGCY | 1 cut(s) | 1476 |
| HaeIII | GGCC | 3 cut(s) | 161, 402, 534 |
| HapII | CCGG | 2 cut(s) | 512, 1299 |
| HgaI | GACGC | 1 cut(s) | 1051 |
| HhaI | GCGC | 3 cut(s) | 125, 157, 1475 |
| Hin1I | GRCGYC | 1 cut(s) | 1473 |
| Hin1II | CATG | 2 cut(s) | 1175, 1498 |
| Hin6I | GCGC | 3 cut(s) | 123, 155, 1473 |
| HinP1I | GCGC | 3 cut(s) | 123, 155, 1473 |
| HindIII | AAGCTT | 1 cut(s) | 1413 |
| HpaII | CCGG | 2 cut(s) | 512, 1299 |
| HphI | GGTGA | 4 cut(s) | 821, 1286, 1442, 1607 |
| Hpy166II | GTNNAC | 2 cut(s) | 1694, 1715 |
| Hpy188III | TCNNGA | 8 cut(s) | 72, 1022, 1145, 1211, 1241, 1265, 1396, 1532 |
| Hpy8I | GTNNAC | 2 cut(s) | 1694, 1715 |
| Hpy99I | CGWCG | 3 cut(s) | 917, 1787, 1790 |
| HpyAV | CCTTC | 9 cut(s) | 106, 253, 288, 706, 870, 1142, 1198, 1318, 1789 |
| HpyCH4III | ACNGT | 2 cut(s) | 730, 1712 |
| HpyCH4IV | ACGT | 6 cut(s) | 255, 966, 1026, 1654, 1696, 1729 |
| HpyCH4V | TGCA | 5 cut(s) | 491, 518, 938, 1340, 1570 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 12, 314, 521, 740, 1196, 1205, 1668 |
| HpyF3I | CTNAG | 9 cut(s) | 96, 381, 393, 445, 525, 744, 990, 1038, 1138 |
| HpySE526I | ACGT | 6 cut(s) | 255, 966, 1026, 1654, 1696, 1729 |
| Hsp92I | GRCGYC | 1 cut(s) | 1473 |
| Hsp92II | CATG | 2 cut(s) | 1175, 1498 |
| HspAI | GCGC | 3 cut(s) | 123, 155, 1473 |
| KasI | GGCGCC | 1 cut(s) | 1472 |
| KpnI | GGTACC | 1 cut(s) | 720 |
| KroI | GCCGGC | 1 cut(s) | 511 |
| KroNI | GCCGGC | 1 cut(s) | 513 |
| Kzo9I | GATC | 5 cut(s) | 928, 1141, 1255, 1373, 1392 |
| LmnI | GCTCC | 9 cut(s) | 46, 289, 376, 575, 665, 1006, 1398, 1406, 1759 |
| LweI | GCATC | 5 cut(s) | 82, 970, 1096, 1349, 1498 |
| MaeI | CTAG | 5 cut(s) | 213, 327, 564, 1532, 1748 |
| MaeII | ACGT | 6 cut(s) | 255, 966, 1026, 1654, 1696, 1729 |
| MaeIII | GTNAC | 4 cut(s) | 496, 782, 809, 1562 |
| MalI | GATC | 5 cut(s) | 930, 1143, 1257, 1375, 1394 |
| MbiI | CCGCTC | 1 cut(s) | 284 |
| MboI | GATC | 5 cut(s) | 928, 1141, 1255, 1373, 1392 |
| MflI | RGATCY | 2 cut(s) | 1141, 1373 |
| MhlI | GDGCHC | 2 cut(s) | 590, 1403 |
| MluCI | AATT | 3 cut(s) | 1093, 1535, 1550 |
| Mly113I | GGCGCC | 1 cut(s) | 1473 |
| MlyI | GAGTC | 7 cut(s) | 239, 242, 584, 779, 806, 899, 937 |
| MmeI | TCCRAC | 2 cut(s) | 83, 936 |
| MroNI | GCCGGC | 1 cut(s) | 511 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1097 |
| MseI | TTAA | 5 cut(s) | 290, 549, 753, 1218, 1539 |
| MslI | CAYNNNNRTG | 1 cut(s) | 965 |
| MspA1I | CMGCKG | 5 cut(s) | 47, 521, 737, 1190, 1668 |
| MspI | CCGG | 2 cut(s) | 512, 1299 |
| MspR9I | CCNGG | 2 cut(s) | 1612, 1758 |
| MvaI | CCWGG | 2 cut(s) | 1612, 1758 |
| MvnI | CGCG | 1 cut(s) | 1335 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 12, 314, 521, 740, 1196, 1205, 1668 |
| NaeI | GCCGGC | 1 cut(s) | 513 |
| NarI | GGCGCC | 1 cut(s) | 1473 |
| NdeII | GATC | 5 cut(s) | 928, 1141, 1255, 1373, 1392 |
| NgoMIV | GCCGGC | 1 cut(s) | 511 |
| NlaIII | CATG | 2 cut(s) | 1175, 1498 |
| NlaIV | GGNNCC | 6 cut(s) | 42, 264, 718, 834, 1329, 1474 |
| NmuCI | GTSAC | 2 cut(s) | 782, 809 |
| NspI | RCATGY | 1 cut(s) | 1175 |
| OliI | CACNNNNGTG | 1 cut(s) | 965 |
| PaqCI | CACCTGC | 1 cut(s) | 1561 |
| PciI | ACATGT | 1 cut(s) | 1171 |
| PdiI | GCCGGC | 1 cut(s) | 513 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1097 |
| PfeI | GAWTC | 8 cut(s) | 338, 353, 464, 593, 686, 776, 902, 986 |
| PfoI | TCCNGGA | 1 cut(s) | 1756 |
| PleI | GAGTC | 7 cut(s) | 238, 242, 583, 779, 806, 898, 937 |
| PluTI | GGCGCC | 1 cut(s) | 1476 |
| PpsI | GAGTC | 7 cut(s) | 238, 242, 583, 779, 806, 898, 937 |
| PscI | ACATGT | 1 cut(s) | 1171 |
| Psp124BI | GAGCTC | 2 cut(s) | 590, 1403 |
| Psp6I | CCWGG | 2 cut(s) | 1610, 1756 |
| PspFI | CCCAGC | 1 cut(s) | 1012 |
| PspGI | CCWGG | 2 cut(s) | 1610, 1756 |
| PspN4I | GGNNCC | 6 cut(s) | 42, 264, 718, 834, 1329, 1474 |
| PspPI | GGNCC | 3 cut(s) | 401, 533, 1328 |
| PstI | CTGCAG | 1 cut(s) | 520 |
| PstNI | CAGNNNCTG | 2 cut(s) | 305, 545 |
| PsuI | RGATCY | 2 cut(s) | 1141, 1373 |
| PvuII | CAGCTG | 2 cut(s) | 521, 1190 |
| RsaI | GTAC | 2 cut(s) | 718, 1606 |
| RsaNI | GTAC | 2 cut(s) | 717, 1605 |
| RseI | CAYNNNNRTG | 1 cut(s) | 965 |
| SacI | GAGCTC | 2 cut(s) | 590, 1403 |
| SaqAI | TTAA | 5 cut(s) | 290, 549, 753, 1218, 1539 |
| Sau3AI | GATC | 5 cut(s) | 928, 1141, 1255, 1373, 1392 |
| Sau96I | GGNCC | 3 cut(s) | 401, 533, 1328 |
| SchI | GAGTC | 7 cut(s) | 239, 242, 584, 779, 806, 899, 937 |
| ScrFI | CCNGG | 2 cut(s) | 1612, 1758 |
| SduI | GDGCHC | 2 cut(s) | 590, 1403 |
| SfaNI | GCATC | 5 cut(s) | 82, 970, 1096, 1349, 1498 |
| SfcI | CTRYAG | 2 cut(s) | 48, 516 |
| SfoI | GGCGCC | 1 cut(s) | 1474 |
| SinI | GGWCC | 1 cut(s) | 1328 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 965 |
| SmlI | CTYRAG | 1 cut(s) | 864 |
| SmoI | CTYRAG | 1 cut(s) | 864 |
| SpeI | ACTAGT | 1 cut(s) | 212 |
| Sse9I | AATT | 3 cut(s) | 1093, 1535, 1550 |
| SsiI | CCGC | 7 cut(s) | 24, 45, 282, 735, 1335, 1512, 1668 |
| SspDI | GGCGCC | 1 cut(s) | 1472 |
| SspI | AATATT | 1 cut(s) | 1353 |
| SspMI | CTAG | 5 cut(s) | 213, 327, 564, 1532, 1748 |
| SstI | GAGCTC | 2 cut(s) | 590, 1403 |
| StyD4I | CCNGG | 2 cut(s) | 1610, 1756 |
| StyI | CCWWGG | 1 cut(s) | 1378 |
| TaaI | ACNGT | 2 cut(s) | 730, 1712 |
| TaiI | ACGT | 6 cut(s) | 258, 969, 1029, 1657, 1699, 1732 |
| TaqI | TCGA | 3 cut(s) | 1031, 1360, 1782 |
| TasI | AATT | 3 cut(s) | 1093, 1535, 1550 |
| TauI | GCSGC | 3 cut(s) | 737, 1514, 1671 |
| TfiI | GAWTC | 8 cut(s) | 338, 353, 464, 593, 686, 776, 902, 986 |
| Tru1I | TTAA | 5 cut(s) | 290, 549, 753, 1218, 1539 |
| Tru9I | TTAA | 5 cut(s) | 290, 549, 753, 1218, 1539 |
| TscAI | CASTG | 3 cut(s) | 337, 967, 1717 |
| TseFI | GTSAC | 2 cut(s) | 782, 809 |
| Tsp45I | GTSAC | 2 cut(s) | 782, 809 |
| TspDTI | ATGAA | 1 cut(s) | 330 |
| TspGWI | ACGGA | 2 cut(s) | 1058, 1118 |
| TspRI | CASTG | 3 cut(s) | 337, 967, 1717 |
| VpaK11BI | GGWCC | 1 cut(s) | 1328 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 1382, 1761 |
| XapI | RAATTY | 3 cut(s) | 1093, 1535, 1550 |
| XbaI | TCTAGA | 1 cut(s) | 1531 |
| XceI | RCATGY | 1 cut(s) | 1175 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1097 |
| XspI | CTAG | 5 cut(s) | 213, 327, 564, 1532, 1748 |