Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr13

Orthogroup ID

OG0006174

Physical Location & Seq

Genomic Coordinates Reverse (-)

1740522 .. 1749888

Gene Structure 9367 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2178 bp

ATGGACAAAAATCAAAATGAATGGAGAAAGGAGAATCTAAAGGGGAGGCAGGGACCTACAAGGAAATGCCGTGATTTCTTTCACCTTTTAACCAATTTTTCCATTTCTCTCTTTAAAATCGTATCCAAACTAACCAAATTAGCGAAATGCTTTCTCCTTGTCTTCTCTTTTTCCAATATATTCCGAGTCCGACGAATCGCACATTTTCAAACAAGAAAACGCTGTCCAAACAGAGATAAACCTTGCGAAGACTTTTATACTCTTCTTATTTGCCACACAAACTCAACTTTCTTTACTTTTAAGCCTCTAAAACACCAGAGTCTCTCAACTCTCAACTCTCAACTCTCAACCTCTTCCTTTCCGCGAAACACCGACTCAGAAAATTACTTTTCCAATAAGCACCTCTCTCTCTCTCTCTCTCTCTTGCATGCAACCATAGCTAAACCAGAGAGGGAGATGATTAGGGCGCAGAGAGTTTTGGTGTTTTTAATAGCTTTTCTGGGGTTGCTTTTGAAGACTTCATGGGCGGAAGAGCAGCTTGTAAATCTGACCAGGCTGCAGATGTTTGTGGATGAACTTCCCCATATGCCCCTACTCAAAGGCTTTGATGTAGTCAAAGGTGTTCCCAAACCCAAATCATTGAAGATTGGGATGTACATGAAAAAATGGAGATTCCACAGAGACCTTCCACCGACGCCAGTGTTCGCCTACGGTACACGCAAGCGCACAGCAACGGTCCCTGGTCCAACAATCGAAGCCCTCCAGGGAATCGATACCTTCGTGACGTGGAGTAATTACCTTCCTTCAAAACACATTCTGCCTTGGGACCCAACCATTCCAACGGCCCTACCCGTTACTAACAAGGGCGTTCCTACTGTGGTGCACCTCCACGGCGGCATCCATGAACCCGAAAGCGATGGAAGCGCAAATGCATGGTTCACTGCCGACTTCAAAGACCGCGGGCCCACTTGGCCCAACCGAAGATATCGCTACCGCAATCAGCAACATCCAGGGAACCTGTGGTACCATGATCACTCCATGGGGTTGACCAGAGTCAACCTCCTCGCTGGCTTGATTGGTGCCTACATTGTCCGTCATCCAGAAGTCGAGGGCCCACTTCGACTCCCGAGTGGCGAATTTGATCGAACGCTGGTAGTGTTTGATCGGAGCTTTCGCACTGACGGTTCGATATACATCAACCCTACTGGAAACAATCCCTCCATACATCCGCAATGGCAGCCGGAATATTTTGGTGACGCGATTATTGTGAACGGGAAGGCATGGCCGCAATTGAAGGTACGACGACGTAAATACAGGTTCCGAATTATCAACGCCAGCAATGCGAGATTCTTCAAATTCTTCTTCACCAACGGTCTGAGATTTATCCACGTGGGGTCTGATTCGGCTTACCTTGGGAAACCGGTGGAGACCAAGGACTTTTTGCTGGGGCCATCTGAGATCACAGATGTGGTGGTTGACTTTTCCAAGTCTAAGAATGCCAAGGCAATCCTGGCCAATGGTGCACCGTATCCTTACCCATCGGGCGATCCCGTTAACAATGAGAACAGTAAGGTCATGCAGTTTTTGATTGCTGACCATTCAGAGCTAGACGCGTCGCGCGTTCCGTCAAGGTTAATTCAGTACCCCGTCCCTGATATATCGAGTTCGTCACGCACACGATACATCGCAATGTACGAGTACACGAGCGACATTGATGAGCCGACACATCTTTACTTGAACGGGAAATCATACGAGGAACCGGCGACGGAGATTGTGAAAGCAGGGACCAGCGAGGTGTGGAACGTGATCAATCTGACGGAGGACAACCATCCCTTACACATTCACTTGGGACTGTTCGTAGTATTGGAACAGAGGGAGTTGGTGAATGTGGAGGAGTTTACAGATTGCATGAATAAGCTAAACGACGCCGTCAAGTGCCAAATAAGCAAGTATGCACGCGGCAAAACTGTAGAGGTGCCAGCTCACGAGAAAGGGTGGAAGAACGTTTTCAAGATGAGAAACGGGACTGTGACAAAGATATTTTTGAGATTTGCTTACATACACTCGAATGCGTCGTATGAGTTCGATCCTACTGGGGAGCCTGGCTACGTGTACCATTGTCACATCTTGGATCATGAGGACAATGTGATGATGAGACCCTTAAAACTTGTCCATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005794 GO:0005829 GO:0006950 GO:0007154 GO:0008150 GO:0008152 GO:0009267 GO:0009605 GO:0009628 GO:0009888 GO:0009987 GO:0009991 GO:0010073 GO:0012505 GO:0016020 GO:0016036 GO:0016491 GO:0016679 GO:0016682 GO:0016722 GO:0030312 GO:0031667 GO:0031668 GO:0031669 GO:0032501 GO:0032502 GO:0033554 GO:0042594 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0048507 GO:0048856 GO:0050896 GO:0051716 GO:0052716 GO:0055114 GO:0071496 GO:0071944 GO:0080167

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

726

Amino Acids

83.33

Weight (kDa)

9.45

Isoelectric Point (pI)

33.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_2	PF07731	566 - 721	2.2e-09	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006174)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G23010 AT1G71040
fragaria_vesca	FvH4_4g32270 FvH4_4g32270 FvH4_4g32270 FvH4_4g32270 FvH4_4g32270 FvH4_4g32270
malus_domestica	MD13G1026500.v1.1 MD13G1026600.v1.1 MD16G1029700.v1.1
prunus_persica	Prupe.1G323200_v2.0.a1 Prupe.1G323200_v2.0.a1
pyrus_communis	pycom13g02510 pycom13g02520
rosa_chinensis	RchiOBHm_Chr4g0441061
rosa_laevigata	RLG00000006123
rosa_multiflora	Rmu_sc0004609.1_g000002 Rmu_sc0006317.1_g000001 Rmu_sc0035661.1_g000001
rosa_roxburghii	Rroxscaffold_5G00381980
rosa_rugosa	Rorug04G0330500
rosa_samantha	Rh4AG382200 Rh4BG395800 Rh4CG410900 Rh4DG388900
rosa_wichuraiana	Rw4G032980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1023
AccB1I	GGYRCC	3 cut(s)	1023, 1079, 1975
AccII	CGCG	7 cut(s)	364, 960, 1259, 1613, 1618, 1620, 1959
AciI	CCGC	9 cut(s)	362, 527, 894, 958, 960, 994, 1229, 1286, 1959
AclI	AACGTT	1 cut(s)	2004
AclWI	GGATC	3 cut(s)	1541, 2081, 2139
AcoI	YGGCCR	2 cut(s)	1283, 1512
AcsI	RAATTY	2 cut(s)	1136, 1355
AcvI	CACGTG	1 cut(s)	1390
AcyI	GRCGYC	2 cut(s)	695, 1926
AfaI	GTAC	8 cut(s)	656, 715, 1025, 1299, 1643, 1694, 1700, 2114
AflIII	ACRYGT	2 cut(s)	1611, 2109
AgeI	ACCGGT	1 cut(s)	1420
AgsI	TTSAA	9 cut(s)	209, 514, 643, 807, 952, 1294, 1354, 1738, 2011
AjiI	CACGTC	1 cut(s)	786
AjnI	CCWGG	6 cut(s)	551, 739, 762, 1009, 1509, 2101
AleI	CACNNNNGTG	1 cut(s)	1466
AluBI	AGCT	7 cut(s)	440, 494, 538, 1170, 1606, 1918, 1982
AluI	AGCT	7 cut(s)	440, 494, 538, 1170, 1606, 1918, 1982
Alw21I	GWGCWC	2 cut(s)	885, 1525
Alw26I	GTCTC	4 cut(s)	326, 675, 1421, 2149
Alw44I	GTGCAC	2 cut(s)	881, 1521
AlwI	GGATC	3 cut(s)	1541, 2081, 2139
Ama87I	CYCGRG	1 cut(s)	1126
AoxI	GGCC	7 cut(s)	843, 962, 971, 1111, 1283, 1448, 1512
ApaI	GGGCCC	2 cut(s)	966, 1115
ApaLI	GTGCAC	2 cut(s)	881, 1521
ApeKI	GCWGC	3 cut(s)	535, 556, 1237
ApoI	RAATTY	2 cut(s)	1136, 1355
AsiGI	ACCGGT	1 cut(s)	1420
Asp700I	GAANNNNTTC	1 cut(s)	2006
Asp718I	GGTACC	1 cut(s)	1023
AspLEI	GCGC	4 cut(s)	469, 726, 926, 1620
AsuHPI	GGTGA	4 cut(s)	74, 1265, 1357, 1894
AvaI	CYCGRG	1 cut(s)	1126
AvaII	GGWCC	5 cut(s)	53, 736, 743, 826, 1785
BaeGI	GKGCMC	4 cut(s)	885, 966, 1115, 1525
BaeI	ACNNNNGTAYC	2 cut(s)	765, 798
BalI	TGGCCA	1 cut(s)	1514
BanI	GGYRCC	3 cut(s)	1023, 1079, 1975
BanII	GRGCYC	2 cut(s)	966, 1115
BauI	CACGAG	2 cut(s)	1702, 1985
BbrPI	CACGTG	1 cut(s)	1390
BbsI	GAAGAC	3 cut(s)	154, 255, 521
Bbv12I	GWGCWC	2 cut(s)	885, 1525
BbvI	GCAGC	3 cut(s)	543, 547, 1249
BccI	CCATC	4 cut(s)	911, 1459, 1546, 1836
BceAI	ACGGC	4 cut(s)	54, 858, 907, 1913
BciT130I	CCWGG	6 cut(s)	553, 741, 764, 1011, 1511, 2103
BciVI	GTATCC	2 cut(s)	133, 1539
BclI	TGATCA	2 cut(s)	1030, 1806
BcoDI	GTCTC	4 cut(s)	326, 675, 1421, 2149
BfaI	CTAG	1 cut(s)	1607
BfmI	CTRYAG	2 cut(s)	557, 1968
BfuI	GTATCC	2 cut(s)	133, 1539
BglI	GCCNNNNNGGC	1 cut(s)	970
BisI	GCNGC	6 cut(s)	536, 557, 895, 1238, 1286, 1960
BlsI	GCNGC	6 cut(s)	537, 558, 896, 1239, 1287, 1961
Bme1390I	CCNGG	6 cut(s)	553, 741, 764, 1011, 1511, 2103
Bme18I	GGWCC	5 cut(s)	53, 736, 743, 826, 1785
BmeT110I	CYCGRG	1 cut(s)	1126
BmgBI	CACGTC	1 cut(s)	786
BmrFI	CCNGG	6 cut(s)	553, 741, 764, 1011, 1511, 2103
BmrI	ACTGGG	1 cut(s)	2103
BmsI	GCATC	1 cut(s)	906
BmuI	ACTGGG	1 cut(s)	2103
BoxI	GACNNNNGTC	1 cut(s)	1052
BpiI	GAAGAC	3 cut(s)	154, 255, 521
BplI	GAGNNNNNCTC	2 cut(s)	1044, 1076
BpmI	CTGGAG	1 cut(s)	746
Bsa29I	ATCGAT	1 cut(s)	771
BsaAI	YACGTR	2 cut(s)	1390, 2110
BsaBI	GATNNNNATC	1 cut(s)	1193
BsaHI	GRCGYC	2 cut(s)	695, 1926
BsaI	GGTCTC	3 cut(s)	675, 1421, 2149
BsaWI	WCCGGW	1 cut(s)	1420
BsaXI	ACNNNNNCTCC	4 cut(s)	1107, 1137, 1202, 1232
Bse118I	RCCGGY	2 cut(s)	1420, 1759
Bse1I	ACTGG	3 cut(s)	698, 1210, 2098
Bse3DI	GCAATG	3 cut(s)	1238, 1345, 1695
Bse8I	GATNNNNATC	1 cut(s)	1193
BseBI	CCWGG	6 cut(s)	553, 741, 764, 1011, 1511, 2103
BseCI	ATCGAT	1 cut(s)	771
BseGI	GGATG	7 cut(s)	577, 657, 897, 1006, 1096, 1225, 1828
BseJI	GATNNNNATC	1 cut(s)	1193
BseMI	GCAATG	3 cut(s)	1238, 1345, 1695
BseMII	CTCAG	3 cut(s)	390, 1367, 1446
BseNI	ACTGG	3 cut(s)	698, 1210, 2098
BseRI	GAGGAG	2 cut(s)	1052, 1907
BseSI	GKGCMC	4 cut(s)	885, 966, 1115, 1525
BseXI	GCAGC	3 cut(s)	543, 547, 1249
BseYI	CCCAGC	1 cut(s)	1444
Bsh1236I	CGCG	7 cut(s)	364, 960, 1259, 1613, 1618, 1620, 1959
BshFI	GGCC	7 cut(s)	845, 964, 973, 1113, 1285, 1450, 1514
BshNI	GGYRCC	3 cut(s)	1023, 1079, 1975
BshTI	ACCGGT	1 cut(s)	1420
BshVI	ATCGAT	1 cut(s)	771
BsiHKAI	GWGCWC	2 cut(s)	885, 1525
BsiHKCI	CYCGRG	1 cut(s)	1126
BsiSI	CCGG	3 cut(s)	1241, 1421, 1760
BslFI	GGGAC	7 cut(s)	66, 722, 839, 1634, 1798, 1863, 2038
BsmAI	GTCTC	4 cut(s)	326, 675, 1421, 2149
BsmFI	GGGAC	7 cut(s)	66, 722, 839, 1634, 1798, 1863, 2038
BsmI	GAATGC	2 cut(s)	1501, 2074
BsnI	GGCC	7 cut(s)	845, 964, 973, 1113, 1285, 1450, 1514
Bso31I	GGTCTC	3 cut(s)	675, 1421, 2149
BsoBI	CYCGRG	1 cut(s)	1126
Bsp120I	GGGCCC	2 cut(s)	962, 1111
Bsp1286I	GDGCHC	4 cut(s)	885, 966, 1115, 1525
Bsp1407I	TGTACA	1 cut(s)	654
Bsp143I	GATC	8 cut(s)	1030, 1141, 1162, 1458, 1546, 1806, 2086, 2131
Bsp19I	CCATGG	1 cut(s)	1038
BspACI	CCGC	9 cut(s)	362, 527, 894, 958, 960, 994, 1229, 1286, 1959
BspANI	GGCC	7 cut(s)	845, 964, 973, 1113, 1285, 1450, 1514
BspCNI	CTCAG	3 cut(s)	389, 1368, 1447
BspDI	ATCGAT	1 cut(s)	771
BspFNI	CGCG	7 cut(s)	364, 960, 1259, 1613, 1618, 1620, 1959
BspHI	TCATGA	1 cut(s)	2134
BspMAI	CTGCAG	1 cut(s)	561
BspPI	GGATC	3 cut(s)	1541, 2081, 2139
BspQI	GCTCTTC	1 cut(s)	525
BspT107I	GGYRCC	3 cut(s)	1023, 1079, 1975
BspTNI	GGTCTC	3 cut(s)	675, 1421, 2149
BsrDI	GCAATG	3 cut(s)	1238, 1345, 1695
BsrFI	RCCGGY	2 cut(s)	1420, 1759
BsrGI	TGTACA	1 cut(s)	654
BsrI	ACTGG	3 cut(s)	698, 1210, 2098
BssAI	RCCGGY	2 cut(s)	1420, 1759
BssMI	GATC	8 cut(s)	1030, 1141, 1162, 1458, 1546, 1806, 2086, 2131
BssNI	GRCGYC	2 cut(s)	695, 1926
BssSI	CACGAG	2 cut(s)	1702, 1985
BssT1I	CCWWGG	5 cut(s)	821, 1038, 1411, 1431, 1500
Bst2BI	CACGAG	2 cut(s)	1702, 1985
Bst2UI	CCWGG	6 cut(s)	553, 741, 764, 1011, 1511, 2103
Bst6I	CTCTTC	3 cut(s)	267, 358, 525
BstACI	GRCGYC	2 cut(s)	695, 1926
BstAUI	TGTACA	1 cut(s)	654
BstBAI	YACGTR	2 cut(s)	1390, 2110
BstC8I	GCNNGC	7 cut(s)	429, 722, 962, 1069, 1336, 1957, 1980
BstDEI	CTNAG	4 cut(s)	376, 1376, 1455, 1491
BstDSI	CCRYGG	3 cut(s)	889, 958, 1038
BstF5I	GGATG	7 cut(s)	577, 657, 897, 1006, 1096, 1225, 1828
BstFNI	CGCG	7 cut(s)	364, 960, 1259, 1613, 1618, 1620, 1959
BstHHI	GCGC	4 cut(s)	469, 726, 926, 1620
BstKTI	GATC	8 cut(s)	1033, 1144, 1165, 1461, 1549, 1809, 2089, 2134
BstMAI	GTCTC	4 cut(s)	326, 675, 1421, 2149
BstMBI	GATC	8 cut(s)	1030, 1141, 1162, 1458, 1546, 1806, 2086, 2131
BstMWI	GCNNNNNNNGC	8 cut(s)	437, 921, 970, 1237, 1340, 1511, 1520, 1944
BstNI	CCWGG	6 cut(s)	553, 741, 764, 1011, 1511, 2103
BstNSI	RCATGY	1 cut(s)	431
BstPAI	GACNNNNGTC	1 cut(s)	1052
BstSCI	CCNGG	6 cut(s)	551, 739, 762, 1009, 1509, 2101
BstSFI	CTRYAG	2 cut(s)	557, 1968
BstSLI	GKGCMC	4 cut(s)	885, 966, 1115, 1525
BstUI	CGCG	7 cut(s)	364, 960, 1259, 1613, 1618, 1620, 1959
BstV1I	GCAGC	3 cut(s)	543, 547, 1249
BstV2I	GAAGAC	3 cut(s)	154, 255, 521
Bsu15I	ATCGAT	1 cut(s)	771
BsuI	GTATCC	2 cut(s)	133, 1539
BsuRI	GGCC	7 cut(s)	845, 964, 973, 1113, 1285, 1450, 1514
BsuTUI	ATCGAT	1 cut(s)	771
BtgI	CCRYGG	3 cut(s)	889, 958, 1038
BtgZI	GCGATG	2 cut(s)	930, 1669
BtrI	CACGTC	1 cut(s)	786
BtsCI	GGATG	7 cut(s)	577, 657, 897, 1006, 1096, 1225, 1828
BtsI	GCAGTG	1 cut(s)	939
BtsIMutI	CAGTG	3 cut(s)	705, 939, 1176
Cac8I	GCNNGC	7 cut(s)	429, 722, 962, 1069, 1336, 1957, 1980
CciI	TCATGA	1 cut(s)	2134
CfoI	GCGC	4 cut(s)	469, 726, 926, 1620
Cfr10I	RCCGGY	2 cut(s)	1420, 1759
Cfr42I	CCGCGG	1 cut(s)	961
ClaI	ATCGAT	1 cut(s)	771
CseI	GACGC	6 cut(s)	703, 1265, 1602, 1619, 1934, 2061
Csp6I	GTAC	8 cut(s)	655, 714, 1024, 1298, 1642, 1693, 1699, 2113
CspAI	ACCGGT	1 cut(s)	1420
CviQI	GTAC	8 cut(s)	655, 714, 1024, 1298, 1642, 1693, 1699, 2113
DdeI	CTNAG	4 cut(s)	376, 1376, 1455, 1491
DpnI	GATC	8 cut(s)	1032, 1143, 1164, 1460, 1548, 1808, 2088, 2133
DpnII	GATC	8 cut(s)	1030, 1141, 1162, 1458, 1546, 1806, 2086, 2131
DraI	TTTAAA	1 cut(s)	115
EaeI	YGGCCR	2 cut(s)	1283, 1512
Eam1104I	CTCTTC	3 cut(s)	267, 358, 525
EarI	CTCTTC	3 cut(s)	267, 358, 525
EciI	GGCGGA	1 cut(s)	542
Eco130I	CCWWGG	5 cut(s)	821, 1038, 1411, 1431, 1500
Eco24I	GRGCYC	2 cut(s)	966, 1115
Eco31I	GGTCTC	3 cut(s)	675, 1421, 2149
Eco32I	GATATC	1 cut(s)	986
Eco47I	GGWCC	5 cut(s)	53, 736, 743, 826, 1785
Eco72I	CACGTG	1 cut(s)	1390
Eco88I	CYCGRG	1 cut(s)	1126
EcoO109I	RGGNCCY	3 cut(s)	53, 826, 1111
EcoRII	CCWGG	6 cut(s)	551, 739, 762, 1009, 1509, 2101
EcoRV	GATATC	1 cut(s)	986
EcoT14I	CCWWGG	5 cut(s)	821, 1038, 1411, 1431, 1500
EcoT22I	ATGCAT	1 cut(s)	934
EcoT38I	GRGCYC	2 cut(s)	966, 1115
ErhI	CCWWGG	5 cut(s)	821, 1038, 1411, 1431, 1500
FalI	AAGNNNNNCTT	2 cut(s)	522, 554
FaqI	GGGAC	7 cut(s)	66, 722, 839, 1634, 1798, 1863, 2038
FauI	CCCGC	1 cut(s)	953
FauNDI	CATATG	1 cut(s)	585
FbaI	TGATCA	2 cut(s)	1030, 1806
Fnu4HI	GCNGC	6 cut(s)	536, 557, 895, 1238, 1286, 1960
FokI	GGATG	7 cut(s)	584, 664, 884, 993, 1083, 1212, 1815
FriOI	GRGCYC	2 cut(s)	966, 1115
Fsp4HI	GCNGC	6 cut(s)	536, 557, 895, 1238, 1286, 1960
FspBI	CTAG	1 cut(s)	1607
GlaI	GCGC	4 cut(s)	468, 725, 925, 1619
GluI	GCNGC	6 cut(s)	536, 557, 895, 1238, 1286, 1960
GsaI	CCCAGC	1 cut(s)	1448
GsuI	CTGGAG	1 cut(s)	746
HaeIII	GGCC	7 cut(s)	845, 964, 973, 1113, 1285, 1450, 1514
HapII	CCGG	3 cut(s)	1241, 1421, 1760
HgaI	GACGC	6 cut(s)	703, 1265, 1602, 1619, 1934, 2061
HhaI	GCGC	4 cut(s)	469, 726, 926, 1620
Hin1I	GRCGYC	2 cut(s)	695, 1926
Hin6I	GCGC	4 cut(s)	467, 724, 924, 1618
HinP1I	GCGC	4 cut(s)	467, 724, 924, 1618
HincII	GTYRAC	4 cut(s)	1047, 1057, 1477, 1555
HindII	GTYRAC	4 cut(s)	1047, 1057, 1477, 1555
HpaI	GTTAAC	1 cut(s)	1555
HpaII	CCGG	3 cut(s)	1241, 1421, 1760
HphI	GGTGA	4 cut(s)	74, 1265, 1357, 1894
Hpy188III	TCNNGA	6 cut(s)	781, 1100, 1126, 1985, 2011, 2135
Hpy99I	CGWCG	8 cut(s)	195, 697, 1305, 1308, 1618, 1768, 1928, 2077
HpyAV	CCTTC	6 cut(s)	695, 787, 809, 813, 1270, 1288
HpyCH4IV	ACGT	6 cut(s)	785, 1306, 1389, 1803, 2004, 2109
HpyCH4V	TGCA	9 cut(s)	427, 431, 559, 883, 932, 1523, 1579, 1908, 1955
HpyF10VI	GCNNNNNNNGC	8 cut(s)	437, 921, 970, 1237, 1340, 1511, 1520, 1944
HpyF3I	CTNAG	4 cut(s)	376, 1376, 1455, 1491
HpySE526I	ACGT	6 cut(s)	785, 1306, 1389, 1803, 2004, 2109
Hsp92I	GRCGYC	2 cut(s)	695, 1926
HspAI	GCGC	4 cut(s)	467, 724, 924, 1618
KflI	GGGWCCC	1 cut(s)	826
KpnI	GGTACC	1 cut(s)	1027
Ksp22I	TGATCA	2 cut(s)	1030, 1806
KspAI	GTTAAC	1 cut(s)	1555
KspI	CCGCGG	1 cut(s)	961
Kzo9I	GATC	8 cut(s)	1030, 1141, 1162, 1458, 1546, 1806, 2086, 2131
LguI	GCTCTTC	1 cut(s)	525
LmnI	GCTCC	2 cut(s)	1167, 2098
Lsp1109I	GCAGC	3 cut(s)	543, 547, 1249
LweI	GCATC	1 cut(s)	906
MaeI	CTAG	1 cut(s)	1607
MaeII	ACGT	6 cut(s)	785, 1306, 1389, 1803, 2004, 2109
MaeIII	GTNAC	6 cut(s)	781, 853, 1253, 1668, 2029, 2120
MalI	GATC	8 cut(s)	1032, 1143, 1164, 1460, 1548, 1808, 2088, 2133
MboI	GATC	8 cut(s)	1030, 1141, 1162, 1458, 1546, 1806, 2086, 2131
MfeI	CAATTG	1 cut(s)	1289
MhlI	GDGCHC	4 cut(s)	885, 966, 1115, 1525
MlsI	TGGCCA	1 cut(s)	1514
MluCI	AATT	9 cut(s)	94, 137, 382, 793, 1136, 1289, 1323, 1355, 1635
MluI	ACGCGT	1 cut(s)	1611
MluNI	TGGCCA	1 cut(s)	1514
MlyI	GAGTC	5 cut(s)	195, 328, 368, 1062, 1116
MmeI	TCCRAC	3 cut(s)	214, 770, 863
Mox20I	TGGCCA	1 cut(s)	1514
Mph1103I	ATGCAT	1 cut(s)	934
MroXI	GAANNNNTTC	1 cut(s)	2006
MscI	TGGCCA	1 cut(s)	1514
MseI	TTAA	7 cut(s)	89, 114, 300, 488, 1554, 1634, 2162
MslI	CAYNNNNRTG	3 cut(s)	1466, 1688, 2067
Msp20I	TGGCCA	1 cut(s)	1514
MspA1I	CMGCKG	1 cut(s)	960
MspI	CCGG	3 cut(s)	1241, 1421, 1760
MspR9I	CCNGG	6 cut(s)	553, 741, 764, 1011, 1511, 2103
MunI	CAATTG	1 cut(s)	1289
Mva1269I	GAATGC	2 cut(s)	1501, 2074
MvaI	CCWGG	6 cut(s)	553, 741, 764, 1011, 1511, 2103
MvnI	CGCG	7 cut(s)	364, 960, 1259, 1613, 1618, 1620, 1959
MwoI	GCNNNNNNNGC	8 cut(s)	437, 921, 970, 1237, 1340, 1511, 1520, 1944
NcoI	CCATGG	1 cut(s)	1038
NdeI	CATATG	1 cut(s)	585
NdeII	GATC	8 cut(s)	1030, 1141, 1162, 1458, 1546, 1806, 2086, 2131
NmuCI	GTSAC	5 cut(s)	781, 1253, 1668, 2029, 2120
NsiI	ATGCAT	1 cut(s)	934
NspI	RCATGY	1 cut(s)	431
OliI	CACNNNNGTG	1 cut(s)	1466
PaeI	GCATGC	1 cut(s)	431
PagI	TCATGA	1 cut(s)	2134
PciSI	GCTCTTC	1 cut(s)	525
PcsI	WCGNNNNNNNCGW	5 cut(s)	777, 1617, 1622, 1692, 2072
PctI	GAATGC	2 cut(s)	1501, 2074
PdmI	GAANNNNTTC	1 cut(s)	2006
PfeI	GAWTC	6 cut(s)	34, 195, 672, 768, 1347, 1400
PflFI	GACNNNGTC	1 cut(s)	1928
PinAI	ACCGGT	1 cut(s)	1420
PkrI	GCNGC	6 cut(s)	537, 558, 896, 1239, 1287, 1961
PleI	GAGTC	5 cut(s)	194, 327, 368, 1061, 1116
PmaCI	CACGTG	1 cut(s)	1390
PmlI	CACGTG	1 cut(s)	1390
PpsI	GAGTC	5 cut(s)	194, 327, 368, 1061, 1116
Ppu21I	YACGTR	2 cut(s)	1390, 2110
PpuMI	RGGWCCY	2 cut(s)	53, 826
PshAI	GACNNNNGTC	1 cut(s)	1052
Psp1406I	AACGTT	1 cut(s)	2004
Psp5II	RGGWCCY	2 cut(s)	53, 826
Psp6I	CCWGG	6 cut(s)	551, 739, 762, 1009, 1509, 2101
PspCI	CACGTG	1 cut(s)	1390
PspFI	CCCAGC	1 cut(s)	1444
PspGI	CCWGG	6 cut(s)	551, 739, 762, 1009, 1509, 2101
PspOMI	GGGCCC	2 cut(s)	962, 1111
PspPPI	RGGWCCY	2 cut(s)	53, 826
PsrI	GAACNNNNNNTAC	2 cut(s)	1007, 1039
PstI	CTGCAG	1 cut(s)	561
PsyI	GACNNNGTC	1 cut(s)	1928
RsaI	GTAC	8 cut(s)	656, 715, 1025, 1299, 1643, 1694, 1700, 2114
RsaNI	GTAC	8 cut(s)	655, 714, 1024, 1298, 1642, 1693, 1699, 2113
RseI	CAYNNNNRTG	3 cut(s)	1466, 1688, 2067
SacII	CCGCGG	1 cut(s)	961
SapI	GCTCTTC	1 cut(s)	525
SaqAI	TTAA	7 cut(s)	89, 114, 300, 488, 1554, 1634, 2162
SatI	GCNGC	6 cut(s)	536, 557, 895, 1238, 1286, 1960
Sau3AI	GATC	8 cut(s)	1030, 1141, 1162, 1458, 1546, 1806, 2086, 2131
SchI	GAGTC	5 cut(s)	195, 328, 368, 1062, 1116
ScrFI	CCNGG	6 cut(s)	553, 741, 764, 1011, 1511, 2103
SduI	GDGCHC	4 cut(s)	885, 966, 1115, 1525
SfaNI	GCATC	1 cut(s)	906
SfcI	CTRYAG	2 cut(s)	557, 1968
SfiI	GGCCNNNNNGGCC	1 cut(s)	970
Sfr303I	CCGCGG	1 cut(s)	961
SgrBI	CCGCGG	1 cut(s)	961
SinI	GGWCC	5 cut(s)	53, 736, 743, 826, 1785
SmiMI	CAYNNNNRTG	3 cut(s)	1466, 1688, 2067
SphI	GCATGC	1 cut(s)	431
Sse9I	AATT	9 cut(s)	94, 137, 382, 793, 1136, 1289, 1323, 1355, 1635
SsiI	CCGC	9 cut(s)	362, 527, 894, 958, 960, 994, 1229, 1286, 1959
SspI	AATATT	1 cut(s)	1247
SspMI	CTAG	1 cut(s)	1607
StyD4I	CCNGG	6 cut(s)	551, 739, 762, 1009, 1509, 2101
StyI	CCWWGG	5 cut(s)	821, 1038, 1411, 1431, 1500
TaiI	ACGT	6 cut(s)	788, 1309, 1392, 1806, 2007, 2112
TaqI	TCGA	9 cut(s)	753, 771, 1107, 1120, 1144, 1187, 1661, 2066, 2085
TasI	AATT	9 cut(s)	94, 137, 382, 793, 1136, 1289, 1323, 1355, 1635
TatI	WGTACW	2 cut(s)	654, 1698
TauI	GCSGC	3 cut(s)	897, 1288, 1962
TfiI	GAWTC	6 cut(s)	34, 195, 672, 768, 1347, 1400
Tru1I	TTAA	7 cut(s)	89, 114, 300, 488, 1554, 1634, 2162
Tru9I	TTAA	7 cut(s)	89, 114, 300, 488, 1554, 1634, 2162
TscAI	CASTG	3 cut(s)	705, 946, 1183
TseFI	GTSAC	5 cut(s)	781, 1253, 1668, 2029, 2120
TseI	GCWGC	3 cut(s)	535, 556, 1237
Tsp45I	GTSAC	5 cut(s)	781, 1253, 1668, 2029, 2120
TspDTI	ATGAA	6 cut(s)	33, 510, 588, 674, 918, 1925
TspGWI	ACGGA	4 cut(s)	1082, 1614, 1781, 1832
TspRI	CASTG	3 cut(s)	705, 946, 1183
Tth111I	GACNNNGTC	1 cut(s)	1928
VneI	GTGCAC	2 cut(s)	881, 1521
VpaK11BI	GGWCC	5 cut(s)	53, 736, 743, 826, 1785
XapI	RAATTY	2 cut(s)	1136, 1355
XceI	RCATGY	1 cut(s)	431
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1017, 1507
XmnI	GAANNNNTTC	1 cut(s)	2006
XspI	CTAG	1 cut(s)	1607
Zsp2I	ATGCAT	1 cut(s)	934

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.