Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr13

Orthogroup ID

OG0013193

Physical Location & Seq

Genomic Coordinates Reverse (-)

7110643 .. 7115978

Gene Structure 5336 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1407 bp

ATGCCAATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGCAAAAATGCAAGCCGTTCGATCTCAGAGGAAATCTTTCGTCAAGGAAGTCGTCCCGACCCTCCCTCTCTACCGCTCTGCTCCCGCCCTTGAAGTTCGTCTAGAAGAGTTCGAGCTCTTCGCCCTCGATCGCCTCCGAGTGCTTAAAGGGATATCTGATGGATTATCACGCGGAAAGAAACATGACGAAATGCAGAAATTGGCAATAGAACTATGGAAAACAAATATGAGGCATCCTCAGGCATATGAGGTCGTCAACAAGGACATAATATCGCACTTTGTTCTTCGGCTAGTTTATTGCAGAACGGAGGACCTGAGAAAATGGTTTCTTTCCATGGAGACTGCCCTATTTCGTTACCGATTTATGAACGAACAACCTGAACCTCAGAGGGCGCTCATGGAAGAATTTGATCTTCCATACAAGGCAGTTGGTGGTTCAGAACTCGAGAGTGTATTAGATAAATTGGTCCAGGTTTCGCGTTCGCTCGGTGCTCAATCTCAACCAACTGCTAATGATATCTTCTTCAAGGTACCGTTTGAAGAAGTCCCAGAACTGGTAGCCAGTCGTAGAGTATTCATCAGTAAGGGGCATGCATATATAGCTAGAAATCAGGTGGTTTCCCTTGTTGCCACACAGTTCCGCAGTCTTCTATCAAAGGCACTTATTTTGACAAACAGAAAATGGACAACAACTATAGCAGAACAAGAGAAGGATCGATTGACTCCTATTGTTGAAGCCCTATCCTCAAGTTACCTGGGCCCCGACTATTCTGAGCCAAAAGAGTTTGGTCAGATTTCGTTAAAAGACATTGATGATGCAGCTAAGAGCTCATTTCCTCTGTGCATGCGCCACCTATTTGAAAAGTTGAGAGAGGATCATCATTTAAAGCATGGAGGGAGAATGCAACTAGGTCTCTTTCTCAAGGGTGTTGGGTTGAAGCTGGATGATGCCCTTGCGTTTTGGAAAGCTGAGTTCTCACAAAAAGTTGGTGTTGAAAGGTTTGACAAAGAATATTCATATGGCATACGCCACAATTATGGAAGAGAAGGGAAAAGAACGGATTACACGCCTTATTCCTGTCAAAAAATCATCTCATCTACTCCTGGTGTAGGAGATCATCATGGATGCCCATATCGATATTTCAGTGAAGAGAACTTGAGAGCAGCTCTTGGTAAAATGGGAGTTACTGGCCGAGCGGTTGGAGATGTAATGGACAAAGTTAAAAACAAACATTATCAGCTGGCATGCACCTTGACGTTCGAAGCTATTCATGGTTCATCATGTGACGCTGGAATTAACCATCCAAATCAGTACTTTAAGGACAGCCAAAGTATTATAAAGTCTAAGAACCAGTCTGCAGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000428 GO:0003674 GO:0003676 GO:0003677 GO:0003697 GO:0003824 GO:0003887 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005657 GO:0005658 GO:0005694 GO:0006139 GO:0006259 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0016740 GO:0016772 GO:0016779 GO:0018130 GO:0019438 GO:0030880 GO:0030894 GO:0031974 GO:0031981 GO:0032991 GO:0032993 GO:0034061 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043596 GO:0043601 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0046483 GO:0055029 GO:0061695 GO:0070013 GO:0071704 GO:0071897 GO:0090304 GO:0097159 GO:0140097 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko00230 ko00240 ko01100 ko03030 map00230 map00240 map01100 map03030

Pfam Domains

Protein Families

DNA_primase_lrg

Protein Analysis

469

Amino Acids

53.64

Weight (kDa)

9.14

Isoelectric Point (pI)

40.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DNA_primase_lrg_N	PF26466	41 - 243	4.3e-54	Eukaryotic and archaeal DNA primase, large subunit N-terminal domain
DNA_primase_lrg	PF04104	287 - 453	1.4e-64	Eukaryotic and archaeal DNA primase, large subunit C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0013193)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G67320 AT1G67320
fragaria_vesca	FvH4_4g14550 FvH4_4g14550 FvH4_4g14550
malus_domestica	MD09G1083700.v1.1 MD13G1121900.v1.1 MD16G1122200.v1.1
prunus_persica	Prupe.1G223400_v2.0.a1
pyrus_communis	pycom13g10610
rosa_chinensis	RchiOBHm_Chr4g0418271
rosa_laevigata	RLG00000007881
rosa_multiflora	Rmu_sc0000032.1_g000005
rosa_roxburghii	Rroxscaffold_5G00361450
rosa_rugosa	Rorug04G0151600
rosa_samantha	Rh4AG213200 Rh4CG224900
rosa_wichuraiana	Rw4G018110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1379
Acc65I	GGTACC	1 cut(s)	571
AccB1I	GGYRCC	1 cut(s)	571
AccBSI	CCGCTC	2 cut(s)	117, 1238
AccII	CGCG	2 cut(s)	213, 520
AciI	CCGC	5 cut(s)	115, 126, 213, 682, 1238
AclWI	GGATC	2 cut(s)	762, 924
AcoI	YGGCCR	1 cut(s)	1231
AcsI	RAATTY	1 cut(s)	446
AfaI	GTAC	2 cut(s)	573, 1355
AfiI	CCNNNNNNNGG	2 cut(s)	595, 1151
AgsI	TTSAA	7 cut(s)	134, 568, 581, 776, 902, 979, 1037
AjnI	CCWGG	3 cut(s)	510, 795, 1144
Alw21I	GWGCWC	3 cut(s)	159, 535, 872
Alw26I	GTCTC	2 cut(s)	374, 959
AlwI	GGATC	2 cut(s)	762, 924
Ama87I	CYCGRG	1 cut(s)	485
AoxI	GGCC	2 cut(s)	799, 1231
ApaI	GGGCCC	1 cut(s)	803
ApeKI	GCWGC	3 cut(s)	860, 1205, 1400
ApoI	RAATTY	1 cut(s)	446
Asp700I	GAANNNNTTC	2 cut(s)	77, 1308
Asp718I	GGTACC	1 cut(s)	571
AspLEI	GCGC	2 cut(s)	436, 891
AspS9I	GGNCC	4 cut(s)	352, 508, 799, 800
AsuII	TTCGAA	1 cut(s)	1302
AvaI	CYCGRG	1 cut(s)	485
AvaII	GGWCC	2 cut(s)	352, 508
AxyI	CCTNAGG	1 cut(s)	279
BaeGI	GKGCMC	1 cut(s)	803
BanI	GGYRCC	1 cut(s)	571
BanII	GRGCYC	3 cut(s)	159, 803, 872
BbsI	GAAGAC	1 cut(s)	680
Bbv12I	GWGCWC	3 cut(s)	159, 535, 872
BbvI	GCAGC	2 cut(s)	872, 1217
BccI	CCATC	2 cut(s)	194, 1350
BceAI	ACGGC	1 cut(s)	41
BcgI	CGANNNNNNTGC	2 cut(s)	41, 75
BciT130I	CCWGG	3 cut(s)	512, 797, 1146
BcoDI	GTCTC	2 cut(s)	374, 959
BfaI	CTAG	4 cut(s)	143, 332, 645, 950
BfmI	CTRYAG	2 cut(s)	735, 1398
BfoI	RGCGCY	1 cut(s)	437
BisI	GCNGC	3 cut(s)	861, 1206, 1401
BlsI	GCNGC	3 cut(s)	862, 1207, 1402
BmcAI	AGTACT	1 cut(s)	1355
Bme1390I	CCNGG	3 cut(s)	512, 797, 1146
Bme18I	GGWCC	2 cut(s)	352, 508
BmeT110I	CYCGRG	1 cut(s)	485
BmgT120I	GGNCC	4 cut(s)	352, 508, 799, 800
BmiI	GGNNCC	3 cut(s)	573, 801, 802
BmrFI	CCNGG	3 cut(s)	512, 797, 1146
BmsI	GCATC	4 cut(s)	283, 847, 979, 1157
BpiI	GAAGAC	1 cut(s)	680
BplI	GAGNNNNNCTC	4 cut(s)	262, 294, 1192, 1224
Bpu14I	TTCGAA	1 cut(s)	1302
BpuEI	CTTGAG	3 cut(s)	772, 947, 1219
Bsa29I	ATCGAT	2 cut(s)	757, 1177
BsaI	GGTCTC	1 cut(s)	959
BsaJI	CCNNGG	2 cut(s)	375, 796
Bsc4I	CCNNNNNNNGG	2 cut(s)	595, 1151
Bse1I	ACTGG	4 cut(s)	600, 603, 1234, 1393
Bse21I	CCTNAGG	1 cut(s)	279
BseBI	CCWGG	3 cut(s)	512, 797, 1146
BseCI	ATCGAT	2 cut(s)	757, 1177
BseDI	CCNNGG	2 cut(s)	375, 796
BseGI	GGATG	4 cut(s)	274, 991, 1172, 1342
BseLI	CCNNNNNNNGG	2 cut(s)	595, 1151
BseMII	CTCAG	6 cut(s)	80, 293, 347, 440, 804, 1002
BseNI	ACTGG	4 cut(s)	600, 603, 1234, 1393
BseRI	GAGGAG	1 cut(s)	54
BseSI	GKGCMC	1 cut(s)	803
BseXI	GCAGC	2 cut(s)	872, 1217
Bsh1236I	CGCG	2 cut(s)	213, 520
Bsh1285I	CGRYCG	1 cut(s)	172
BshFI	GGCC	2 cut(s)	801, 1233
BshNI	GGYRCC	1 cut(s)	571
BshVI	ATCGAT	2 cut(s)	757, 1177
BsiEI	CGRYCG	1 cut(s)	172
BsiHKAI	GWGCWC	3 cut(s)	159, 535, 872
BsiHKCI	CYCGRG	1 cut(s)	485
BslFI	GGGAC	2 cut(s)	80, 572
BslI	CCNNNNNNNGG	2 cut(s)	595, 1151
BsmAI	GTCTC	2 cut(s)	374, 959
BsmFI	GGGAC	2 cut(s)	80, 572
BsmI	GAATGC	1 cut(s)	948
BsnI	GGCC	2 cut(s)	801, 1233
Bso31I	GGTCTC	1 cut(s)	959
BsoBI	CYCGRG	1 cut(s)	485
Bsp119I	TTCGAA	1 cut(s)	1302
Bsp120I	GGGCCC	1 cut(s)	799
Bsp1286I	GDGCHC	4 cut(s)	159, 535, 803, 872
Bsp143I	GATC	6 cut(s)	62, 169, 451, 754, 916, 1156
Bsp19I	CCATGG	1 cut(s)	375
BspACI	CCGC	5 cut(s)	115, 126, 213, 682, 1238
BspANI	GGCC	2 cut(s)	801, 1233
BspCNI	CTCAG	6 cut(s)	79, 292, 348, 439, 805, 1003
BspDI	ATCGAT	2 cut(s)	757, 1177
BspFNI	CGCG	2 cut(s)	213, 520
BspLI	GGNNCC	3 cut(s)	573, 801, 802
BspMAI	CTGCAG	1 cut(s)	1402
BspPI	GGATC	2 cut(s)	762, 924
BspQI	GCTCTTC	1 cut(s)	164
BspT104I	TTCGAA	1 cut(s)	1302
BspT107I	GGYRCC	1 cut(s)	571
BspTNI	GGTCTC	1 cut(s)	959
BsrBI	CCGCTC	2 cut(s)	117, 1238
BsrI	ACTGG	4 cut(s)	600, 603, 1234, 1393
BssECI	CCNNGG	2 cut(s)	375, 796
BssMI	GATC	6 cut(s)	62, 169, 451, 754, 916, 1156
BssT1I	CCWWGG	1 cut(s)	375
Bst2UI	CCWGG	3 cut(s)	512, 797, 1146
Bst4CI	ACNGT	2 cut(s)	576, 678
Bst6I	CTCTTC	4 cut(s)	141, 164, 1078, 1185
BstBI	TTCGAA	1 cut(s)	1302
BstC8I	GCNNGC	5 cut(s)	54, 633, 887, 1284, 1288
BstDEI	CTNAG	8 cut(s)	66, 279, 356, 426, 813, 864, 1011, 1386
BstDSI	CCRYGG	1 cut(s)	375
BstENI	CCTNNNNNAGG	1 cut(s)	1149
BstF5I	GGATG	4 cut(s)	274, 991, 1172, 1342
BstFNI	CGCG	2 cut(s)	213, 520
BstH2I	RGCGCY	1 cut(s)	437
BstHHI	GCGC	2 cut(s)	436, 891
BstKTI	GATC	6 cut(s)	65, 172, 454, 757, 919, 1159
BstMAI	GTCTC	2 cut(s)	374, 959
BstMBI	GATC	6 cut(s)	62, 169, 451, 754, 916, 1156
BstMCI	CGRYCG	1 cut(s)	172
BstMWI	GCNNNNNNNGC	1 cut(s)	641
BstNI	CCWGG	3 cut(s)	512, 797, 1146
BstNSI	RCATGY	3 cut(s)	635, 889, 1290
BstSCI	CCNGG	3 cut(s)	510, 795, 1144
BstSFI	CTRYAG	2 cut(s)	735, 1398
BstSLI	GKGCMC	1 cut(s)	803
BstUI	CGCG	2 cut(s)	213, 520
BstV1I	GCAGC	2 cut(s)	872, 1217
BstV2I	GAAGAC	1 cut(s)	680
BstXI	CCANNNNNNTGG	1 cut(s)	1079
Bsu15I	ATCGAT	2 cut(s)	757, 1177
Bsu36I	CCTNAGG	1 cut(s)	279
BsuRI	GGCC	2 cut(s)	801, 1233
BsuTUI	ATCGAT	2 cut(s)	757, 1177
BtgI	CCRYGG	1 cut(s)	375
BtsCI	GGATG	4 cut(s)	274, 991, 1172, 1342
BtsIMutI	CAGTG	1 cut(s)	1192
Cac8I	GCNNGC	5 cut(s)	54, 633, 887, 1284, 1288
CfoI	GCGC	2 cut(s)	436, 891
Cfr13I	GGNCC	4 cut(s)	352, 508, 799, 800
ClaI	ATCGAT	2 cut(s)	757, 1177
CseI	GACGC	1 cut(s)	1337
Csp6I	GTAC	2 cut(s)	572, 1354
CviQI	GTAC	2 cut(s)	572, 1354
DdeI	CTNAG	8 cut(s)	66, 279, 356, 426, 813, 864, 1011, 1386
DpnI	GATC	6 cut(s)	64, 171, 453, 756, 918, 1158
DpnII	GATC	6 cut(s)	62, 169, 451, 754, 916, 1156
DraI	TTTAAA	1 cut(s)	927
EaeI	YGGCCR	1 cut(s)	1231
Eam1104I	CTCTTC	4 cut(s)	141, 164, 1078, 1185
EarI	CTCTTC	4 cut(s)	141, 164, 1078, 1185
Ecl136II	GAGCTC	2 cut(s)	157, 870
Eco130I	CCWWGG	1 cut(s)	375
Eco24I	GRGCYC	3 cut(s)	159, 803, 872
Eco31I	GGTCTC	1 cut(s)	959
Eco32I	GATATC	2 cut(s)	195, 559
Eco47I	GGWCC	2 cut(s)	352, 508
Eco53kI	GAGCTC	2 cut(s)	157, 870
Eco81I	CCTNAGG	1 cut(s)	279
Eco88I	CYCGRG	1 cut(s)	485
EcoICRI	GAGCTC	2 cut(s)	157, 870
EcoNI	CCTNNNNNAGG	1 cut(s)	1149
EcoO109I	RGGNCCY	2 cut(s)	352, 800
EcoRII	CCWGG	3 cut(s)	510, 795, 1144
EcoRV	GATATC	2 cut(s)	195, 559
EcoT14I	CCWWGG	1 cut(s)	375
EcoT22I	ATGCAT	1 cut(s)	637
EcoT38I	GRGCYC	3 cut(s)	159, 803, 872
ErhI	CCWWGG	1 cut(s)	375
FaqI	GGGAC	2 cut(s)	80, 572
FauI	CCCGC	1 cut(s)	133
FauNDI	CATATG	2 cut(s)	286, 1060
Fnu4HI	GCNGC	3 cut(s)	861, 1206, 1401
FokI	GGATG	4 cut(s)	261, 998, 1179, 1329
FriOI	GRGCYC	3 cut(s)	159, 803, 872
Fsp4HI	GCNGC	3 cut(s)	861, 1206, 1401
FspBI	CTAG	4 cut(s)	143, 332, 645, 950
GlaI	GCGC	2 cut(s)	435, 890
GluI	GCNGC	3 cut(s)	861, 1206, 1401
HaeII	RGCGCY	1 cut(s)	437
HaeIII	GGCC	2 cut(s)	801, 1233
HgaI	GACGC	1 cut(s)	1337
HhaI	GCGC	2 cut(s)	436, 891
Hin6I	GCGC	2 cut(s)	434, 889
HinP1I	GCGC	2 cut(s)	434, 889
HincII	GTYRAC	1 cut(s)	298
HindII	GTYRAC	1 cut(s)	298
HinfI	GANTC	1 cut(s)	763
Hpy166II	GTNNAC	1 cut(s)	298
Hpy188I	TCNGA	7 cut(s)	69, 179, 199, 429, 481, 814, 834
Hpy188III	TCNNGA	3 cut(s)	97, 143, 487
Hpy8I	GTNNAC	1 cut(s)	298
HpyAV	CCTTC	2 cut(s)	745, 1082
HpyCH4III	ACNGT	2 cut(s)	576, 678
HpyCH4IV	ACGT	1 cut(s)	1298
HpyCH4V	TGCA	9 cut(s)	52, 235, 342, 635, 860, 885, 946, 1290, 1400
HpyF10VI	GCNNNNNNNGC	1 cut(s)	641
HpyF3I	CTNAG	8 cut(s)	66, 279, 356, 426, 813, 864, 1011, 1386
HpySE526I	ACGT	1 cut(s)	1298
HspAI	GCGC	2 cut(s)	434, 889
KpnI	GGTACC	1 cut(s)	575
Kzo9I	GATC	6 cut(s)	62, 169, 451, 754, 916, 1156
LguI	GCTCTTC	1 cut(s)	164
LmnI	GCTCC	2 cut(s)	41, 127
Lsp1109I	GCAGC	2 cut(s)	872, 1217
LweI	GCATC	4 cut(s)	283, 847, 979, 1157
MaeI	CTAG	4 cut(s)	143, 332, 645, 950
MaeII	ACGT	1 cut(s)	1298
MaeIII	GTNAC	4 cut(s)	395, 791, 1225, 1325
MalI	GATC	6 cut(s)	64, 171, 453, 756, 918, 1158
MbiI	CCGCTC	2 cut(s)	117, 1238
MboI	GATC	6 cut(s)	62, 169, 451, 754, 916, 1156
MhlI	GDGCHC	4 cut(s)	159, 535, 803, 872
MluCI	AATT	5 cut(s)	239, 446, 503, 1075, 1335
MlyI	GAGTC	1 cut(s)	757
MmeI	TCCRAC	1 cut(s)	1222
Mph1103I	ATGCAT	1 cut(s)	637
MroXI	GAANNNNTTC	2 cut(s)	77, 1308
MseI	TTAA	7 cut(s)	186, 842, 926, 1263, 1338, 1359, 1405
MslI	CAYNNNNRTG	1 cut(s)	1077
MspA1I	CMGCKG	1 cut(s)	1282
MspR9I	CCNGG	3 cut(s)	512, 797, 1146
Mva1269I	GAATGC	1 cut(s)	948
MvaI	CCWGG	3 cut(s)	512, 797, 1146
MvnI	CGCG	2 cut(s)	213, 520
MwoI	GCNNNNNNNGC	1 cut(s)	641
NcoI	CCATGG	1 cut(s)	375
NdeI	CATATG	2 cut(s)	286, 1060
NdeII	GATC	6 cut(s)	62, 169, 451, 754, 916, 1156
NlaIV	GGNNCC	3 cut(s)	573, 801, 802
NmeAIII	GCCGAG	1 cut(s)	1259
NmuCI	GTSAC	1 cut(s)	1325
NsiI	ATGCAT	1 cut(s)	637
NspI	RCATGY	3 cut(s)	635, 889, 1290
NspV	TTCGAA	1 cut(s)	1302
PaeI	GCATGC	3 cut(s)	635, 889, 1290
PaeR7I	CTCGAG	1 cut(s)	485
PciSI	GCTCTTC	1 cut(s)	164
PctI	GAATGC	1 cut(s)	948
PdmI	GAANNNNTTC	2 cut(s)	77, 1308
PkrI	GCNGC	3 cut(s)	862, 1207, 1402
Ple19I	CGATCG	1 cut(s)	172
PleI	GAGTC	1 cut(s)	757
PpsI	GAGTC	1 cut(s)	757
PpuMI	RGGWCCY	1 cut(s)	352
PsiI	TTATAA	1 cut(s)	1379
Psp124BI	GAGCTC	2 cut(s)	159, 872
Psp5II	RGGWCCY	1 cut(s)	352
Psp6I	CCWGG	3 cut(s)	510, 795, 1144
PspGI	CCWGG	3 cut(s)	510, 795, 1144
PspN4I	GGNNCC	3 cut(s)	573, 801, 802
PspOMI	GGGCCC	1 cut(s)	799
PspPI	GGNCC	4 cut(s)	352, 508, 799, 800
PspPPI	RGGWCCY	1 cut(s)	352
PstI	CTGCAG	1 cut(s)	1402
PvuI	CGATCG	1 cut(s)	172
PvuII	CAGCTG	1 cut(s)	1282
RsaI	GTAC	2 cut(s)	573, 1355
RsaNI	GTAC	2 cut(s)	572, 1354
RseI	CAYNNNNRTG	1 cut(s)	1077
SacI	GAGCTC	2 cut(s)	159, 872
SapI	GCTCTTC	1 cut(s)	164
SaqAI	TTAA	7 cut(s)	186, 842, 926, 1263, 1338, 1359, 1405
SatI	GCNGC	3 cut(s)	861, 1206, 1401
Sau3AI	GATC	6 cut(s)	62, 169, 451, 754, 916, 1156
Sau96I	GGNCC	4 cut(s)	352, 508, 799, 800
ScaI	AGTACT	1 cut(s)	1355
SchI	GAGTC	1 cut(s)	757
ScrFI	CCNGG	3 cut(s)	512, 797, 1146
SduI	GDGCHC	4 cut(s)	159, 535, 803, 872
SfaNI	GCATC	4 cut(s)	283, 847, 979, 1157
SfcI	CTRYAG	2 cut(s)	735, 1398
Sfr274I	CTCGAG	1 cut(s)	485
SfuI	TTCGAA	1 cut(s)	1302
SinI	GGWCC	2 cut(s)	352, 508
SlaI	CTCGAG	1 cut(s)	485
SmiMI	CAYNNNNRTG	1 cut(s)	1077
SmlI	CTYRAG	4 cut(s)	485, 787, 962, 1198
SmoI	CTYRAG	4 cut(s)	485, 787, 962, 1198
SphI	GCATGC	3 cut(s)	635, 889, 1290
Sse9I	AATT	5 cut(s)	239, 446, 503, 1075, 1335
SsiI	CCGC	5 cut(s)	115, 126, 213, 682, 1238
SspI	AATATT	1 cut(s)	1055
SspMI	CTAG	4 cut(s)	143, 332, 645, 950
SstI	GAGCTC	2 cut(s)	159, 872
StyD4I	CCNGG	3 cut(s)	510, 795, 1144
StyI	CCWWGG	1 cut(s)	375
TaaI	ACNGT	2 cut(s)	576, 678
TaiI	ACGT	1 cut(s)	1301
TaqI	TCGA	7 cut(s)	61, 153, 168, 486, 757, 1177, 1302
TasI	AATT	5 cut(s)	239, 446, 503, 1075, 1335
TatI	WGTACW	1 cut(s)	1353
Tru1I	TTAA	7 cut(s)	186, 842, 926, 1263, 1338, 1359, 1405
Tru9I	TTAA	7 cut(s)	186, 842, 926, 1263, 1338, 1359, 1405
TscAI	CASTG	1 cut(s)	1192
TseFI	GTSAC	1 cut(s)	1325
TseI	GCWGC	3 cut(s)	860, 1205, 1400
Tsp45I	GTSAC	1 cut(s)	1325
TspDTI	ATGAA	5 cut(s)	422, 607, 1047, 1301, 1308
TspGWI	ACGGA	2 cut(s)	362, 1115
TspRI	CASTG	1 cut(s)	1192
VpaK11BI	GGWCC	2 cut(s)	352, 508
XagI	CCTNNNNNAGG	1 cut(s)	1149
XapI	RAATTY	1 cut(s)	446
XbaI	TCTAGA	1 cut(s)	142
XceI	RCATGY	3 cut(s)	635, 889, 1290
XhoI	CTCGAG	1 cut(s)	485
XmnI	GAANNNNTTC	2 cut(s)	77, 1308
XspI	CTAG	4 cut(s)	143, 332, 645, 950
ZrmI	AGTACT	1 cut(s)	1355
Zsp2I	ATGCAT	1 cut(s)	637

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.