Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr13

Orthogroup ID

OG0015983

Physical Location & Seq

Genomic Coordinates Reverse (-)

8692295 .. 8698957

Gene Structure 6663 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 5055 bp

ATGGAGAGAAACTTTCCAAGCAAATCCTTGAAATCGAACGATCGAATGGCGCAGCAAATGTGCTTCGACTGCCTCCAACGCCGGATTCACTCCGACTTCTCCGGCAAACTCGTTTTCTCTTACGGCCTCTCCGATTCCGCCTTCCCTTTTGGCTCCTCAGCCGTCGTTCAGTTGTGTAATTCAAGTGGGGAAGCTGCTTCGGCTCCTCAGTTTTTGCTCAAATTTCTACCCAGTCATCCAAATGATTGCTTGACTAAATATGTTAATGAATATGTCCTGGACAATGCTGAAGGCTGCAGTGATAATGGGATTGATGATAGGATTGCTTCAGTTGGAGTAACTCAGGATGAAGAAGAAATTAGTTCTGATGTTTACAGGAAAGAAAAACCAAAGTCAGATTCTTTAATGAATGAGCCTAAGTGTTTGTCAAATGGTGGCACAGAAATATTGCTACATAGTTCTACCTGTAATCATTCCACTAGGTTTTCTTGCTCGAGGGTTATCAGCGCATTGGCATCGGTTAGTTATGTTGGCAATTTCTCAGACTCAGTTTTTGAAGATCTTGCTGTTAACTCTTTGACCGGGTCTTTGGAAGATCACATATTGAATTCGCTTAGTCTCTTGATTGAAGGGAAAGCTTCAGGGAGAGACAGTGTAAATTTTCTTAACTTACTTGGGATACCGTCGTTTGATGAAAATCAGTTCCCTGGCTCCCTGAGGCATCCAAATATTGCTCCTGTACTTATGATGGTTAAAGCATCCCATTATATAGATGTAGCTCTTCCCAAAACTCCGTACACATTGGAAAACATTCTCCATTACAGTCCCGAAGCCTTAAAATCTGATTGGCATATAAGGTTTCTGATATACCAGTTGCTCTCAGCTCTAGCTTATATTCATGGTTTAGGGGTCGCCCATGGCAATATATGTCCATCCAGTGTAATGCTTACTGAATCATGCTGGTCTCGGCTGTCCATTTTTGATAAGCCCGGGGTAGGATTTAGTTCAAGTTCAAGAGGTAAGGAATGCACAAGTACCTTACCGGAAAAGGTAGGTTGCTCAGAAGCTGGTTGTCCCTCTCAAGGTCTTTATGCTGATTTGAAGCTTTCCCCATCTATAGACTGGCATCGTGACTTCAATCAATGGTGGAGAGGAGAGATCAGTAATTTTGAGTATCTACTCATCTTGAATAGATTAGCTGGGCGAAGGTGGGGTGACCACACATTTCATACAGTGATGCCTTGGGTAATAGATTTTAGCATGAAACCTGATGAGAATTCAGATGCAGGGTGGCGGGATTTAAACAAGAGTAAATGGAGGTTGGCTAAAGGTGATGAACAGTTGGACTTCACCTATTCAACATCGGAGTTCCCACATCACGTATCTGATGAATGTCTTTCTGAATTGGCTGTGTGCAGTTATAAGGCTAGGAGGTTACCTTTGAGTGTTCTACGTATGGCTGTTCGCTCAGTCTATGAACCTAATGAATATCCTTCTACCATGCAAAGACTTTATCAGTGGACCCCTGATGAGTGTATTCCGGAGTTTTACTGCAATCCTCAAATTTTTCATTCACTTCATGCTGGTATGACTGACTTGGCGGTACCTTTATGGGCAGATGGTCCTGAGGAATTCATTAAATTGCATCGTGATGCTTTAGAAAGCGAACGGGTCTCACGTGAACTCCATCACTGGATTGATATCACCTTTGGCTACAAGATGTCAGGCGAGGCAGCTGTTTATGCAAAGAATGTAATGCTTCCTTCATCAGAACCTATGATGCCGAGGTCTGCAGGACGCCGTCAGCTGTTCACTCAACCTCACCCTATGCGTCGAGGTGCAGTGCGGAAACCATGTGATAGCACCAATGAGTCAGCTTTGCATCAAGGGAAAATGAATGAATTAAGGAGTGACAGTTCTGTCCTATCTGAAACTGCTTACTTGCAAGAATTAGAAGATGCATCTTCCTTTTGTGAACATGCTATGCATTTAAGTCCCCTCTATGGCTACCATCTAGACTTTGTGAGGGACATTTCTCCTGTACAAGAGTCATCAGGCGAGAATGTTAACAAAAGTATACCTCGGTCATCTGACACTAAGAAAAACCAGTTGTCACGGTTACATATTGATACAAGTTATCTACTTGAGCATATTGAAGTGGAGGATGAAGGTTCCCGGGGATATCAAGAGCTATTACTTTGGAGGGAAAAATCATCTTGTTTAAAGACGTTCTCTGAAGAAATTGCAAGGGATATATTTTCTGTCGGTTGTCTCTTAGCAGAACTTCATTTGAGGAAGCCACTTTTTGACCCAAGCTCATTGACCATGTACTTGGACAGTGGTGTATTACCTGGATTGATGCATGAACTTCCTCCTCACACCAAATTACTTGTTGAAGCTTGCATTCAAAAGGATTGCATGAGGAGACCATCGGCTAAGTGTCTGTTGGAATCACCATATTTTCCTACTACGGTTAAGGCGTCCTACTTATTTCTGGCCCCTCTCCAGCTTCTGGCTAAAGGTGGATCCTGCCTTCAGTATGCTGCAAATTTTGCAAAGCAAGGAGTCCTCAAGGCAATGGGAACATTTGCTGCGGAAATGTGTGCTCCTTATTGCTTATCGTTTGTGGTGACTCCCTTATCAGATACTGAAGCCGAATGGGCGTATATGCTACTGAAAGAATTTATCAAAAGTTTGACCCCTAAAGCAGTGAAGACATTAGTCTTGCCTGCCATCCAGAAGATTTTACAGACTACAGGTTATTCACATCTAAAGGTTTCTATTCTACAAGACTCCTTTGTTCGAGAGATATGGAATCGAACTGGCAAACAAGTATATCTTGAAACTGTACATCCTCTTGTTATATTGAACTTATATACTGCCGCTCATAATAGTTCAGCAACTGCTGCTTCCGTACTGCTTATTTGCTCAAGTGAAGAACTCGGTATACCTATTACCATTCATCAGACAATCTTACCCCTGATTCAATGCTTTGGGAAAGGTCTCAGTAGTGATGGAATTGACGTGCTGGTTCGAATTGGTGGTTTACTGGGAGAGAACTTCATTGTCAGACAGATGATGCCGTTGCTAAAACATGTGTTTCATTCCTGTATTGGCGTTTCACGTATGAATAAGCCTGAGCCTGTCCACAGCTGGAGTGCTTTTGCTCTTATTGATTGTTTGACGACAATAGATGGCCTTGTTGCATTTTTGCCAAGGGAGGTGGTTGCGAAGGTGCTAGTTGAAGATAAAAGTTGCCCACAGGTTCTGGTTCTTATGGAGACAAGTTTTGAATATAGAGTGCTTCAGGTTGCTGCTACTACCCTAATGGCAGTTTGTGAACGGATAGGACCAGATTTGACAGCATTGCATGTTTTGCCACAACTTAAAGAGCTATTTGATGAGCTTGCTTTCTCACCGAGAAAAGCTAATGCTTCTACTTCCTTTGGCAGAAGGCTGAAGGGTTCAAAGCCAATAATTGACGGAGGGGGTCTGATTGAAAGTCGTATGGACCTTGCGTTGCTTCTGTATCCGTCTTTTGCATACCTTCTTGGGATAGAGAAGCTTCGTCAGTGTTGTACAACATGGTTATTACTTGAGCAATATCTTCTACAATATCATAACTGGAAGTGGGAACACACAGGAGAATTGTCTCGAAGTGGTTCAGACACTATACTCAGTAAAAGATCTGCATTCAGCAATCGCTCAACTCCTGAATACAGTCCTGCTAAGCTGTTGCTTAATGGGGTTGGATGGTCAATTCCACAATCACAAGGAACTAGAGGTGCCAAAAACATGATGCCTCAAAAACGGTTCTCTGAAATGCATCAGAGTTCAGCCGAAATGCATGCATCAAATTTTAAATTCGAGCCCTGGTTTTGGTTCCCTAGTCCAGCTTCTAGCTGGGATGGGCCTGATTTTCTGGCCCGTGCTGGGGGTGTGAAGGATGAACATCCATGGAAGATCAGAGCATCTGTTATATACTCAGTTCGTGCGCACCCTGGGGCCTTAAGGTATTTAGCTGTCTGCCCAGATGAATGTACGGTTTTTACTGCAGGAATTGGTGCAGGGTTCAAAGGGACTGTTCAAAAATGGGAGCTGGCTAGAATCAATTGTGTATCAGGATACTATGGCCACGAGGAGGTTGTGAACGATATTTGTATCTTATCGTCAAGTGGAAGAGTTGCATCCTGTGATGGAACGATACATGTTTGGAATAGCCGAACTGGAAAATTAATTTCAGTATACTCTGAACCATCTATGGATTCTGCACATGTTTCAAGCCCTCCATCTTCTTCCTCCAGGGCCAGTCTTGACCAGGTTAATATGCTCAGTTCCAATGCACAGTCGAGTGGAATATTGACTGGGGCATTTGATGGGAGCTTGTATACTTGTATGCATCAGACAGAACTTGGTGAAAAGCTTGTAGTTGGCACTGGAAATGGTTCACTCAGGTTCATTGATGTTGTCCGAGGACAAAAGCTTCACCTTTGGAGGGGGGATTCTACGGAGTCTGGATATCCTTCTCTTATTTCTTCCATATGCTCCTGTGGGTCTGATAAAATGCAACCGGATGGAGCTTCTTCACCCTCTTGGATTGCAGCTGGATTGAGTTCTGGTCATTGTAGATTATTTGATGCAAGGAGCGGAAATGTTATATCCTCTTGGAAGGCTCATGATGGATACGTGACAAAGTTGGCTGCACCAGAGGACCATTTACTTGTGTCCAGCTCTCTTGACAAGTCTTTAAGAATTTGGGACTTGAGAAGGAATTGGCCATCTCAGCCCACAATTCTTCAGGGTCACACAGACGGTGTATCTTCATTCTCCGTGTGGGGCCAAGACGTTATTTCAATTTCCAGAAATAAGATTGGAATTTCTTCTCTGTCTAAATCCTCCGATGATGATGGACAGCAGGCTGTTACATGTCAAAAACTGTACATGGCGGATCACGGAGCAAGAAACTTTTCGGTGTTGTCAAGCATAAGTATATTACCCTTCTCAAGGTTGTTCCTGGTTGGAACTGAAGATGGCTACCTAAGAATATGTTGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0002376 GO:0005575 GO:0005622 GO:0005623 GO:0006605 GO:0006623 GO:0006810 GO:0006886 GO:0006950 GO:0006952 GO:0006955 GO:0007034 GO:0008104 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0009814 GO:0009816 GO:0015031 GO:0015833 GO:0031461 GO:0032991 GO:0033036 GO:0033365 GO:0034613 GO:0042742 GO:0042886 GO:0043207 GO:0044424 GO:0044464 GO:0045087 GO:0045184 GO:0046907 GO:0050896 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0051704 GO:0051707 GO:0070727 GO:0071702 GO:0071705 GO:0072594 GO:0072665 GO:0072666 GO:0080008 GO:0098542 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Beach Pkinase WD40

Protein Analysis

1685

Amino Acids

186.94

Weight (kDa)

6.25

Isoelectric Point (pI)

51.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beach	PF02138	380 - 590	6.8e-40	Beige/BEACH domain
Beta-prop_WDR36-Utp21_1st	PF25171	1372 - 1611	1.1e-08	WDR36/Utp21 first beta-propeller
WD40_Prp19	PF24814	1529 - 1615	1.1e-06	Prp19 WD40 domain
Beta-prop_WDR3_1st	PF25173	1530 - 1620	1.3e-09	WDR3 first beta-propeller domain
WD40_CDC20-Fz	PF24807	1530 - 1610	1.5e-06	CDC20/Fizzy WD40 domain
Beta-prop_WDR5	PF25175	1540 - 1618	1.9e-07	WDR5 beta-propeller domain
Beta-prop_TEP1_2nd	PF25047	1556 - 1622	8.8e-06	TEP-1 second beta-propeller

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Orthologous Genes (Group: OG0015983)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G18525
fragaria_vesca	FvH4_4g21250 FvH4_4g21250
malus_domestica	MD13G1143700.v1.1
prunus_persica	Prupe.1G108200_v2.0.a1
pyrus_communis	pycom13g12460
rosa_chinensis	RchiOBHm_Chr4g0426871
rosa_laevigata	RLG00000007272
rosa_multiflora	Rmu_sc0000953.1_g000015
rosa_roxburghii	Rroxscaffold_5G00368840
rosa_samantha	Rh4AG270500 Rh4BG276800 Rh4CG291500 Rh4DG274000
rosa_wichuraiana	Rw4G023470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1422
AasI	GACNNNNNNGTC	1 cut(s)	1919
Acc16I	TGCGCA	1 cut(s)	3996
Acc65I	GGTACC	1 cut(s)	1603
AccB1I	GGYRCC	2 cut(s)	1603, 3785
AccB7I	CCANNNNNTGG	1 cut(s)	2512
AccBSI	CCGCTC	2 cut(s)	2885, 4647
AccI	GTMKAC	4 cut(s)	2077, 2947, 4245, 4388
AccIII	TCCGGA	1 cut(s)	1540
AciI	CCGC	8 cut(s)	138, 1294, 1601, 1846, 2594, 2883, 4647, 4946
AclWI	GGATC	3 cut(s)	2520, 2533, 4956
AcoI	YGGCCR	2 cut(s)	4132, 4775
AcvI	CACGTG	1 cut(s)	1679
AcyI	GRCGYC	2 cut(s)	1798, 2480
AflII	CTTAAG	1 cut(s)	4009
AflIII	ACRYGT	4 cut(s)	3094, 4207, 4273, 4925
AjiI	CACGTC	1 cut(s)	3025
AjnI	CCWGG	8 cut(s)	276, 706, 2350, 3872, 4000, 4301, 4317, 5013
AjuI	GAANNNNNNNTTGG	4 cut(s)	69, 101, 382, 414
AloI	GAACNNNNNNTCC	2 cut(s)	1900, 1932
Alw21I	GWGCWC	1 cut(s)	2608
Alw26I	GTCTC	9 cut(s)	623, 642, 969, 1678, 2276, 2419, 3008, 3275, 3657
AlwI	GGATC	3 cut(s)	2520, 2533, 4956
AlwNI	CAGNNNCTG	5 cut(s)	1067, 2512, 2648, 2903, 3268
Ama87I	CYCGRG	3 cut(s)	493, 989, 2175
Aor13HI	TCCGGA	1 cut(s)	1540
ArsI	GACNNNNNNTTYG	4 cut(s)	536, 568, 571, 603
AseI	ATTAAT	1 cut(s)	4235
Asp700I	GAANNNNTTC	5 cut(s)	810, 3661, 4444, 4879, 4966
Asp718I	GGTACC	1 cut(s)	1603
AspLEI	GCGC	3 cut(s)	52, 509, 3997
AsuC2I	CCSGG	5 cut(s)	583, 990, 991, 2176, 2177
AsuII	TTCGAA	1 cut(s)	3034
AvaI	CYCGRG	3 cut(s)	493, 989, 2175
AvaII	GGWCC	5 cut(s)	1521, 1622, 3350, 3511, 4711
AxyI	CCTNAGG	2 cut(s)	716, 1626
BaeI	ACNNNNGTAYC	2 cut(s)	671, 704
BalI	TGGCCA	2 cut(s)	4134, 4777
BamHI	GGATCC	1 cut(s)	2525
BanI	GGYRCC	2 cut(s)	1603, 3785
BanII	GRGCYC	1 cut(s)	3873
BauI	CACGAG	1 cut(s)	4136
BbrPI	CACGTG	1 cut(s)	1679
BbsI	GAAGAC	1 cut(s)	2720
Bbv12I	GWGCWC	1 cut(s)	2608
BbvCI	CCTCAGC	1 cut(s)	157
BceAI	ACGGC	4 cut(s)	139, 146, 1785, 3067
BcgI	CGANNNNNNTGC	4 cut(s)	498, 532, 3830, 3864
BciT130I	CCWGG	8 cut(s)	278, 708, 2352, 3874, 4002, 4303, 4319, 5015
BciVI	GTATCC	4 cut(s)	672, 3540, 4118, 4676
BcnI	CCSGG	5 cut(s)	583, 990, 991, 2176, 2177
BcoDI	GTCTC	9 cut(s)	623, 642, 969, 1678, 2276, 2419, 3008, 3275, 3657
BfaI	CTAG	9 cut(s)	480, 887, 1428, 2015, 3239, 3780, 3888, 3900, 4104
BfmI	CTRYAG	5 cut(s)	295, 1116, 1791, 2754, 4053
BfrI	CTTAAG	1 cut(s)	4009
BfuI	GTATCC	4 cut(s)	672, 3540, 4118, 4676
BglI	GCCNNNNNGGC	1 cut(s)	2660
BglII	AGATCT	2 cut(s)	559, 3686
BlpI	GCTNAGC	1 cut(s)	3729
Bme18I	GGWCC	5 cut(s)	1521, 1622, 3350, 3511, 4711
BmeT110I	CYCGRG	3 cut(s)	493, 989, 2175
BmgBI	CACGTC	1 cut(s)	3025
BmrI	ACTGGG	3 cut(s)	225, 3059, 4374
BmuI	ACTGGG	3 cut(s)	225, 3059, 4374
BoxI	GACNNNNGTC	1 cut(s)	2720
BpiI	GAAGAC	1 cut(s)	2720
BpmI	CTGGAG	3 cut(s)	2489, 3175, 4285
Bpu10I	CCTNAGC	2 cut(s)	157, 3138
Bpu1102I	GCTNAGC	1 cut(s)	3729
Bpu14I	TTCGAA	1 cut(s)	3034
BpuEI	CTTGAG	7 cut(s)	1065, 2165, 2555, 2914, 3617, 4783, 4987
BpuMI	CCSGG	5 cut(s)	583, 990, 991, 2176, 2177
BsaAI	YACGTR	5 cut(s)	1381, 1454, 1679, 3125, 4687
BsaBI	GATNNNNATC	3 cut(s)	696, 1700, 3951
BsaHI	GRCGYC	2 cut(s)	1798, 2480
BsaI	GGTCTC	4 cut(s)	969, 1678, 2419, 3008
BsaWI	WCCGGW	3 cut(s)	1042, 1540, 4570
BsaXI	ACNNNNNCTCC	8 cut(s)	113, 143, 637, 667, 1668, 1698, 1900, 1930
Bse21I	CCTNAGG	2 cut(s)	716, 1626
Bse3DI	GCAATG	2 cut(s)	2583, 3365
Bse8I	GATNNNNATC	3 cut(s)	696, 1700, 3951
BseAI	TCCGGA	1 cut(s)	1540
BseBI	CCWGG	8 cut(s)	278, 708, 2352, 3874, 4002, 4303, 4319, 5015
BseJI	GATNNNNATC	3 cut(s)	696, 1700, 3951
BseMI	GCAATG	2 cut(s)	2583, 3365
BseRI	GAGGAG	6 cut(s)	145, 195, 1167, 2364, 2437, 4154
BseYI	CCCAGC	3 cut(s)	1199, 3903, 3932
BsgI	GTGCAG	5 cut(s)	1435, 1860, 4086, 4254, 4686
Bsh1285I	CGRYCG	1 cut(s)	43
BshNI	GGYRCC	2 cut(s)	1603, 3785
BsiEI	CGRYCG	1 cut(s)	43
BsiHKAI	GWGCWC	1 cut(s)	2608
BsiHKCI	CYCGRG	3 cut(s)	493, 989, 2175
BsiSI	CCGG	8 cut(s)	82, 102, 582, 990, 1043, 1541, 2176, 4571
BslFI	GGGAC	6 cut(s)	810, 1059, 1980, 2042, 4093, 4772
BsmAI	GTCTC	9 cut(s)	623, 642, 969, 1678, 2276, 2419, 3008, 3275, 3657
BsmFI	GGGAC	6 cut(s)	810, 1059, 1980, 2042, 4093, 4772
BsmI	GAATGC	3 cut(s)	1031, 2403, 3692
Bso31I	GGTCTC	4 cut(s)	969, 1678, 2419, 3008
BsoBI	CYCGRG	3 cut(s)	493, 989, 2175
Bsp119I	TTCGAA	1 cut(s)	3034
Bsp1286I	GDGCHC	2 cut(s)	2608, 3873
Bsp13I	TCCGGA	1 cut(s)	1540
Bsp1407I	TGTACA	4 cut(s)	2041, 2848, 3578, 4938
Bsp143I	GATC	8 cut(s)	40, 559, 595, 1158, 2525, 3686, 3963, 4948
Bsp1720I	GCTNAGC	1 cut(s)	3729
Bsp19I	CCATGG	2 cut(s)	916, 3956
BspACI	CCGC	8 cut(s)	138, 1294, 1601, 1846, 2594, 2883, 4647, 4946
BspEI	TCCGGA	1 cut(s)	1540
BspHI	TCATGA	1 cut(s)	4675
BspMAI	CTGCAG	3 cut(s)	299, 1795, 4057
BspPI	GGATC	3 cut(s)	2520, 2533, 4956
BspQI	GCTCTTC	1 cut(s)	786
BspT104I	TTCGAA	1 cut(s)	3034
BspT107I	GGYRCC	2 cut(s)	1603, 3785
BspTI	CTTAAG	1 cut(s)	4009
BspTNI	GGTCTC	4 cut(s)	969, 1678, 2419, 3008
BsrBI	CCGCTC	2 cut(s)	2885, 4647
BsrDI	GCAATG	2 cut(s)	2583, 3365
BsrGI	TGTACA	4 cut(s)	2041, 2848, 3578, 4938
BssMI	GATC	8 cut(s)	40, 559, 595, 1158, 2525, 3686, 3963, 4948
BssNAI	GTATAC	4 cut(s)	2078, 2948, 4246, 4389
BssNI	GRCGYC	2 cut(s)	1798, 2480
BssSI	CACGAG	1 cut(s)	4136
BssT1I	CCWWGG	4 cut(s)	916, 1241, 3215, 3956
Bst1107I	GTATAC	4 cut(s)	2078, 2948, 4246, 4389
Bst2BI	CACGAG	1 cut(s)	4136
Bst2UI	CCWGG	8 cut(s)	278, 708, 2352, 3874, 4002, 4303, 4319, 5015
Bst6I	CTCTTC	2 cut(s)	786, 4174
BstACI	GRCGYC	2 cut(s)	1798, 2480
BstAFI	CTTAAG	1 cut(s)	4009
BstAPI	GCANNNNNTGC	3 cut(s)	2552, 2906, 3376
BstAUI	TGTACA	4 cut(s)	2041, 2848, 3578, 4938
BstBAI	YACGTR	5 cut(s)	1381, 1454, 1679, 3125, 4687
BstBI	TTCGAA	1 cut(s)	3034
BstC8I	GCNNGC	6 cut(s)	2401, 2730, 3408, 3849, 4101, 4917
BstDSI	CCRYGG	2 cut(s)	916, 3956
BstEII	GGTNACC	2 cut(s)	1214, 1434
BstENI	CCTNNNNNAGG	1 cut(s)	5002
BstHHI	GCGC	3 cut(s)	52, 509, 3997
BstKTI	GATC	8 cut(s)	43, 562, 598, 1161, 2528, 3689, 3966, 4951
BstMAI	GTCTC	9 cut(s)	623, 642, 969, 1678, 2276, 2419, 3008, 3275, 3657
BstMBI	GATC	8 cut(s)	40, 559, 595, 1158, 2525, 3686, 3963, 4948
BstMCI	CGRYCG	1 cut(s)	43
BstMWI	GCNNNNNNNGC	9 cut(s)	69, 78, 200, 1742, 2552, 2660, 2906, 3376, 4783
BstNI	CCWGG	8 cut(s)	278, 708, 2352, 3874, 4002, 4303, 4319, 5015
BstNSI	RCATGY	7 cut(s)	1982, 3098, 3374, 3851, 4211, 4277, 4929
BstPAI	GACNNNNGTC	1 cut(s)	2720
BstPI	GGTNACC	2 cut(s)	1214, 1434
BstSFI	CTRYAG	5 cut(s)	295, 1116, 1791, 2754, 4053
BstSNI	TACGTA	1 cut(s)	1454
BstV2I	GAAGAC	1 cut(s)	2720
BstX2I	RGATCY	3 cut(s)	559, 2525, 3686
BstXI	CCANNNNNNTGG	1 cut(s)	2332
BstYI	RGATCY	3 cut(s)	559, 2525, 3686
BstZ17I	GTATAC	4 cut(s)	2078, 2948, 4246, 4389
Bsu36I	CCTNAGG	2 cut(s)	716, 1626
BsuI	GTATCC	4 cut(s)	672, 3540, 4118, 4676
BtgI	CCRYGG	2 cut(s)	916, 3956
BtrI	CACGTC	1 cut(s)	3025
BtsI	GCAGTG	3 cut(s)	304, 1848, 2715
Cac8I	GCNNGC	6 cut(s)	2401, 2730, 3408, 3849, 4101, 4917
CaiI	CAGNNNCTG	5 cut(s)	1067, 2512, 2648, 2903, 3268
CciI	TCATGA	1 cut(s)	4675
CfoI	GCGC	3 cut(s)	52, 509, 3997
Cfr9I	CCCGGG	2 cut(s)	989, 2175
CseI	GACGC	3 cut(s)	1806, 1820, 2469
CsiI	ACCWGGT	1 cut(s)	4317
CspCI	CAANNNNNGTGG	2 cut(s)	3204, 3239
DpnI	GATC	8 cut(s)	42, 561, 597, 1160, 2527, 3688, 3965, 4950
DpnII	GATC	8 cut(s)	40, 559, 595, 1158, 2525, 3686, 3963, 4948
DraI	TTTAAA	3 cut(s)	1302, 2223, 3862
DrdI	GACNNNNNNGTC	1 cut(s)	1919
DseDI	GACNNNNNNGTC	1 cut(s)	1919
EaeI	YGGCCR	2 cut(s)	4132, 4775
Eam1104I	CTCTTC	2 cut(s)	786, 4174
EarI	CTCTTC	2 cut(s)	786, 4174
EciI	GGCGGA	2 cut(s)	127, 4961
Eco105I	TACGTA	1 cut(s)	1454
Eco130I	CCWWGG	4 cut(s)	916, 1241, 3215, 3956
Eco24I	GRGCYC	1 cut(s)	3873
Eco31I	GGTCTC	4 cut(s)	969, 1678, 2419, 3008
Eco32I	GATATC	3 cut(s)	1702, 2183, 4520
Eco47I	GGWCC	5 cut(s)	1521, 1622, 3350, 3511, 4711
Eco72I	CACGTG	1 cut(s)	1679
Eco81I	CCTNAGG	2 cut(s)	716, 1626
Eco88I	CYCGRG	3 cut(s)	493, 989, 2175
Eco91I	GGTNACC	2 cut(s)	1214, 1434
EcoNI	CCTNNNNNAGG	1 cut(s)	5002
EcoO109I	RGGNCCY	1 cut(s)	4005
EcoO65I	GGTNACC	2 cut(s)	1214, 1434
EcoRI	GAATTC	3 cut(s)	607, 1276, 1631
EcoRII	CCWGG	8 cut(s)	276, 706, 2350, 3872, 4000, 4301, 4317, 5013
EcoRV	GATATC	3 cut(s)	1702, 2183, 4520
EcoT14I	CCWWGG	4 cut(s)	916, 1241, 3215, 3956
EcoT22I	ATGCAT	7 cut(s)	1963, 1989, 2364, 3828, 3849, 3853, 4401
EcoT38I	GRGCYC	1 cut(s)	3873
ErhI	CCWWGG	4 cut(s)	916, 1241, 3215, 3956
FalI	AAGNNNNNCTT	2 cut(s)	2823, 2855
FaqI	GGGAC	6 cut(s)	810, 1059, 1980, 2042, 4093, 4772
FauI	CCCGC	1 cut(s)	1287
FauNDI	CATATG	1 cut(s)	4541
FblI	GTMKAC	4 cut(s)	2077, 2947, 4245, 4388
FriOI	GRGCYC	1 cut(s)	3873
FspAI	RTGCGCAY	1 cut(s)	3996
FspBI	CTAG	9 cut(s)	480, 887, 1428, 2015, 3239, 3780, 3888, 3900, 4104
FspI	TGCGCA	1 cut(s)	3996
GlaI	GCGC	3 cut(s)	51, 508, 3996
GsaI	CCCAGC	3 cut(s)	1203, 3907, 3936
GsuI	CTGGAG	3 cut(s)	2489, 3175, 4285
HapII	CCGG	8 cut(s)	82, 102, 582, 990, 1043, 1541, 2176, 4571
HgaI	GACGC	3 cut(s)	1806, 1820, 2469
HhaI	GCGC	3 cut(s)	52, 509, 3997
Hin1I	GRCGYC	2 cut(s)	1798, 2480
Hin6I	GCGC	3 cut(s)	50, 507, 3995
HinP1I	GCGC	3 cut(s)	50, 507, 3995
HincII	GTYRAC	2 cut(s)	571, 2068
HindII	GTYRAC	2 cut(s)	571, 2068
HindIII	AAGCTT	6 cut(s)	636, 1103, 2397, 3563, 4421, 4481
HpaI	GTTAAC	2 cut(s)	571, 2068
HpaII	CCGG	8 cut(s)	82, 102, 582, 990, 1043, 1541, 2176, 4571
Hpy99I	CGWCG	3 cut(s)	167, 688, 1836
HpyCH4IV	ACGT	8 cut(s)	1380, 1453, 1678, 2228, 3024, 3124, 4686, 4845
HpyF10VI	GCNNNNNNNGC	9 cut(s)	69, 78, 200, 1742, 2552, 2660, 2906, 3376, 4783
HpySE526I	ACGT	8 cut(s)	1380, 1453, 1678, 2228, 3024, 3124, 4686, 4845
Hsp92I	GRCGYC	2 cut(s)	1798, 2480
HspAI	GCGC	3 cut(s)	50, 507, 3995
Kpn2I	TCCGGA	1 cut(s)	1540
KpnI	GGTACC	1 cut(s)	1607
KspAI	GTTAAC	2 cut(s)	571, 2068
Kzo9I	GATC	8 cut(s)	40, 559, 595, 1158, 2525, 3686, 3963, 4948
LguI	GCTCTTC	1 cut(s)	786
MabI	ACCWGGT	1 cut(s)	4317
MaeI	CTAG	9 cut(s)	480, 887, 1428, 2015, 3239, 3780, 3888, 3900, 4104
MaeII	ACGT	8 cut(s)	1380, 1453, 1678, 2228, 3024, 3124, 4686, 4845
MalI	GATC	8 cut(s)	42, 561, 597, 1160, 2527, 3688, 3965, 4950
MbiI	CCGCTC	2 cut(s)	2885, 4647
MboI	GATC	8 cut(s)	40, 559, 595, 1158, 2525, 3686, 3963, 4948
MfeI	CAATTG	1 cut(s)	4111
MflI	RGATCY	3 cut(s)	559, 2525, 3686
MhlI	GDGCHC	2 cut(s)	2608, 3873
MlsI	TGGCCA	2 cut(s)	4134, 4777
MluNI	TGGCCA	2 cut(s)	4134, 4777
MlyI	GAGTC	7 cut(s)	539, 1880, 2057, 2574, 2626, 2786, 4520
MmeI	TCCRAC	7 cut(s)	100, 117, 313, 1323, 2427, 3730, 4999
Mox20I	TGGCCA	2 cut(s)	4134, 4777
Mph1103I	ATGCAT	7 cut(s)	1963, 1989, 2364, 3828, 3849, 3853, 4401
MroI	TCCGGA	1 cut(s)	1540
MroXI	GAANNNNTTC	5 cut(s)	810, 3661, 4444, 4879, 4966
MscI	TGGCCA	2 cut(s)	4134, 4777
MslI	CAYNNNNRTG	2 cut(s)	240, 1650
Msp20I	TGGCCA	2 cut(s)	4134, 4777
MspA1I	CMGCKG	4 cut(s)	1736, 1807, 3153, 4604
MspCI	CTTAAG	1 cut(s)	4009
MspI	CCGG	8 cut(s)	82, 102, 582, 990, 1043, 1541, 2176, 4571
MunI	CAATTG	1 cut(s)	4111
Mva1269I	GAATGC	3 cut(s)	1031, 2403, 3692
MvaI	CCWGG	8 cut(s)	278, 708, 2352, 3874, 4002, 4303, 4319, 5015
MwoI	GCNNNNNNNGC	9 cut(s)	69, 78, 200, 1742, 2552, 2660, 2906, 3376, 4783
NciI	CCSGG	5 cut(s)	583, 990, 991, 2176, 2177
NcoI	CCATGG	2 cut(s)	916, 3956
NdeI	CATATG	1 cut(s)	4541
NdeII	GATC	8 cut(s)	40, 559, 595, 1158, 2525, 3686, 3963, 4948
NmeAIII	GCCGAG	2 cut(s)	946, 1809
NmuCI	GTSAC	7 cut(s)	1130, 1214, 1910, 2112, 2629, 4687, 4802
NsbI	TGCGCA	1 cut(s)	3996
NsiI	ATGCAT	7 cut(s)	1963, 1989, 2364, 3828, 3849, 3853, 4401
NspI	RCATGY	7 cut(s)	1982, 3098, 3374, 3851, 4211, 4277, 4929
NspV	TTCGAA	1 cut(s)	3034
PaeI	GCATGC	1 cut(s)	3851
PaeR7I	CTCGAG	1 cut(s)	493
PagI	TCATGA	1 cut(s)	4675
PasI	CCCWGGG	1 cut(s)	4001
PciI	ACATGT	4 cut(s)	3094, 4207, 4273, 4925
PciSI	GCTCTTC	1 cut(s)	786
PcsI	WCGNNNNNNNCGW	3 cut(s)	129, 1675, 2477
PctI	GAATGC	3 cut(s)	1031, 2403, 3692
PdmI	GAANNNNTTC	5 cut(s)	810, 3661, 4444, 4879, 4966
PflFI	GACNNNGTC	2 cut(s)	583, 1800
PflMI	CCANNNNNTGG	1 cut(s)	2512
PfoI	TCCNGGA	1 cut(s)	276
Ple19I	CGATCG	1 cut(s)	43
PleI	GAGTC	7 cut(s)	539, 1879, 2056, 2573, 2626, 2786, 4519
PmaCI	CACGTG	1 cut(s)	1679
PmlI	CACGTG	1 cut(s)	1679
PpsI	GAGTC	7 cut(s)	539, 1879, 2056, 2573, 2626, 2786, 4519
Ppu21I	YACGTR	5 cut(s)	1381, 1454, 1679, 3125, 4687
PscI	ACATGT	4 cut(s)	3094, 4207, 4273, 4925
PshAI	GACNNNNGTC	1 cut(s)	2720
PshBI	ATTAAT	1 cut(s)	4235
PsiI	TTATAA	1 cut(s)	1422
Psp6I	CCWGG	8 cut(s)	276, 706, 2350, 3872, 4000, 4301, 4317, 5013
PspCI	CACGTG	1 cut(s)	1679
PspEI	GGTNACC	2 cut(s)	1214, 1434
PspFI	CCCAGC	3 cut(s)	1199, 3903, 3932
PspGI	CCWGG	8 cut(s)	276, 706, 2350, 3872, 4000, 4301, 4317, 5013
PspXI	VCTCGAGB	1 cut(s)	493
PsrI	GAACNNNNNNTAC	2 cut(s)	2931, 2963
PstI	CTGCAG	3 cut(s)	299, 1795, 4057
PstNI	CAGNNNCTG	5 cut(s)	1067, 2512, 2648, 2903, 3268
PsuI	RGATCY	3 cut(s)	559, 2525, 3686
PsyI	GACNNNGTC	2 cut(s)	583, 1800
PvuI	CGATCG	1 cut(s)	43
PvuII	CAGCTG	4 cut(s)	1736, 1807, 3153, 4604
RseI	CAYNNNNRTG	2 cut(s)	240, 1650
SapI	GCTCTTC	1 cut(s)	786
Sau3AI	GATC	8 cut(s)	40, 559, 595, 1158, 2525, 3686, 3963, 4948
SchI	GAGTC	7 cut(s)	539, 1880, 2057, 2574, 2626, 2786, 4520
SduI	GDGCHC	2 cut(s)	2608, 3873
SexAI	ACCWGGT	1 cut(s)	4317
SfcI	CTRYAG	5 cut(s)	295, 1116, 1791, 2754, 4053
Sfr274I	CTCGAG	1 cut(s)	493
SfuI	TTCGAA	1 cut(s)	3034
SinI	GGWCC	5 cut(s)	1521, 1622, 3350, 3511, 4711
SlaI	CTCGAG	1 cut(s)	493
SmaI	CCCGGG	2 cut(s)	991, 2177
SmiMI	CAYNNNNRTG	2 cut(s)	240, 1650
SmlI	CTYRAG	9 cut(s)	493, 1080, 2144, 2570, 2929, 3596, 4009, 4762, 5002
SmoI	CTYRAG	9 cut(s)	493, 1080, 2144, 2570, 2929, 3596, 4009, 4762, 5002
SnaBI	TACGTA	1 cut(s)	1454
SphI	GCATGC	1 cut(s)	3851
SsiI	CCGC	8 cut(s)	138, 1294, 1601, 1846, 2594, 2883, 4647, 4946
SspI	AATATT	3 cut(s)	447, 730, 4359
SspMI	CTAG	9 cut(s)	480, 887, 1428, 2015, 3239, 3780, 3888, 3900, 4104
StyI	CCWWGG	4 cut(s)	916, 1241, 3215, 3956
TaiI	ACGT	8 cut(s)	1383, 1456, 1681, 2231, 3027, 3127, 4689, 4848
TaqII	GACCGA	1 cut(s)	2073
TatI	WGTACW	6 cut(s)	739, 2041, 2328, 2848, 3578, 4938
TauI	GCSGC	1 cut(s)	2885
TseFI	GTSAC	7 cut(s)	1130, 1214, 1910, 2112, 2629, 4687, 4802
Tsp45I	GTSAC	7 cut(s)	1130, 1214, 1910, 2112, 2629, 4687, 4802
TspGWI	ACGGA	8 cut(s)	783, 2902, 3358, 3498, 3522, 4523, 4819, 4968
TspMI	CCCGGG	2 cut(s)	989, 2175
Tth111I	GACNNNGTC	2 cut(s)	583, 1800
Van91I	CCANNNNNTGG	1 cut(s)	2512
Vha464I	CTTAAG	1 cut(s)	4009
VpaK11BI	GGWCC	5 cut(s)	1521, 1622, 3350, 3511, 4711
VspI	ATTAAT	1 cut(s)	4235
XagI	CCTNNNNNAGG	1 cut(s)	5002
XbaI	TCTAGA	1 cut(s)	2014
XceI	RCATGY	7 cut(s)	1982, 3098, 3374, 3851, 4211, 4277, 4929
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1119, 3900
XhoI	CTCGAG	1 cut(s)	493
XmaI	CCCGGG	2 cut(s)	989, 2175
XmiI	GTMKAC	4 cut(s)	2077, 2947, 4245, 4388
XmnI	GAANNNNTTC	5 cut(s)	810, 3661, 4444, 4879, 4966
XspI	CTAG	9 cut(s)	480, 887, 1428, 2015, 3239, 3780, 3888, 3900, 4104
Zsp2I	ATGCAT	7 cut(s)	1963, 1989, 2364, 3828, 3849, 3853, 4401

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.