pycom13g14610

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
OG0016096
Physical Location & Seq
Forward (+)
10583278 .. 10585086
1809 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1809 bp
ATGAGAAACCCCTTGAACCAAAATCTCATTTTTGCCCTCACCGCCTCAAACCTTTCCCGCCAAAATAAACCGTCAATTTTTCATCTCGTTGAACAGCTCCGGCACTGTAAAGATTCCGGCTCCGCAGAGTCACTGCATTCCGCCGCTATAAAATCCGGTTATTTATATGACACTTTCACCACAAACCATGTCATCAACTGTTATGTCAGGCTCCGAAGAATCAACTTTGCAAGCCAACTGTTTGATGAAATGCCGGAACCAAACGTTGTGTCGTGGACCTCGCTCATGGCTGGTTATGTCGACACGGGTCAGCCTGGAATGGCTCTCTGGCTCTTTGGGAAGATGCCTGAGTGTTCGGTTATTCCCAATGAGTTCACATTCGCGACTGTGATTAATGCGTGTTCGATCCTTGCTCATCTCAGAACTGGGAAGGAAGTTCATGGGCTTGTTGAAGTTTTGGGTTTTCAATCTAACCTTGTTGTTTGCTCTTCGCTGGTTGATATGTACGGGAAGTGCAATGATGTTGATAATGCTCAACGGGTTTTTGATTCGATGAGTTGTAGGAATGTTGTTTCATGGACTTCAATTGTTTGTGCTTATGCACAAAACGCGCAGGGGCAGGAAGCGCTTCAACTTTTTCGAGAATTTATTCATTTGACGTCAGAGCGCCCAAATCATTTTATGTTGGCTAGTGTTGTCAATGCTTGTGCAAGCTTGGGTAGATTAGCTTCTGGGAAAGTTGCACATGGATCAGTAATTCGGGGTAGCCATGATTCGAATGATGTGATTGCAAGTGCACTGGTGGACATGTATGCTAAATGTGGGTGTGTTGAATATTCTGATAAGGTTTTCCGGAGGATTCGGAATCCTACTGTAATACCCTACACTTCAATGATTGTGGCTGCAGCAAAGTACGGACTTGGGAGAATGTCTCTTCAACTCTTTCAAGAAATGATCGATAGAGGAATAAAACCGAACGATGTCACCTTTGTTGGGGTCTTGCATGCTTGTAGCCATTCAGGGCTAGTAGATGAAGGCCTCCAACACTTGGAATCTATGTTTGAGAAGCATGGAATATTACCGAATGCAAAGCATCATACGTGCGTCGTTGATATGCTTGGTAGAACTGGCCGGCTCAACGAGGCCTACGAACTAGCCAAATCTATCCCAGCAGAACCAAACCAAGAGGCCTTGTTGTGGGGCACACTTCTTTCGGCGAGTAGGCTTCACGGAAGGGTAGACATCGCTGTTGAAGCTAGCAGACGGCTAATAGACTCTAATCAACAAGTAGCGGGTGCATACGTCACATTATCAAATGCTTACGCATTGAACGGAGAGTGGGAGAGCTCTCATGATCTTAGGTCAGAAATGAGGCGTACAGGAGTGCAAAAAGAACCCGGATGCAGCTGGGTTGAGGTCAAGGACTCAACTTATGTATTCTATGCTGGAGATGTGTCATCCTGTGCGCGAGGGAGCGAGGTGGTGGCTTTGTTGAGGGATTTGGAAGGGAAAATGAAACAAAGAGGGTATGTAGGAGGGAGTTTGGGACTGGTCTTTGTGGATGTGGAGGAGGAGGCCAAGGAGGAAACTGTAGGTTTGCACAGTGAGAGATTAGCGTTGGGATTTGCGTTGATAAGCATACCAAAGGGAGTGATCATAAGAATAATGAAGAACTTGAGAATGTGTAGGGATTGTCATGAAGCTTTCAAGTTAATTAGTGAGATTGTCGAGAGGGAATTTGTTGTTAGAGATGTTAATAGATTTCATCACTTCAAAAGTGGTTCTTGCACTTGTACGGATTTTTGGTAA

Protein Analysis

603

Amino Acids

66.81

Weight (kDa)

6.62

Isoelectric Point (pI)

37.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 87 - 134 7.5e-11 PPR repeat family
PPR_2 PF13041 290 - 338 4.3e-08 PPR repeat family
E_motif PF20431 411 - 472 1.6e-13 E motif
DYW_deaminase PF14432 515 - 602 2.9e-33 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0016096)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G15720
fragaria_vesca FvH4_3g12520
malus_domestica MD13G1170500.v1.1
prunus_persica Prupe.1G138900_v2.0.a1
pyrus_communis pycom13g14610
rosa_chinensis RchiOBHm_Chr4g0421681
rosa_laevigata RLG00000007659
rosa_multiflora Rmu_sc0004533.1_g000011
rosa_roxburghii Rroxscaffold_5G00363920
rosa_rugosa Rorug04G0174600
rosa_samantha Rh4AG233900 Rh4BG237000 Rh4CG248800
rosa_wichuraiana Rw0G007720 Rw4G020010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 662
AccB7I CCANNNNNTGG 1 cut(s) 1048
AccI GTMKAC 2 cut(s) 300, 1239
AccII CGCG 3 cut(s) 383, 611, 1468
AccIII TCCGGA 1 cut(s) 852
AciI CCGC 6 cut(s) 42, 58, 123, 141, 144, 1292
AclI AACGTT 1 cut(s) 264
AclWI GGATC 2 cut(s) 400, 757
AcoI YGGCCR 1 cut(s) 1129
AcsI RAATTY 2 cut(s) 644, 1736
AcyI GRCGYC 1 cut(s) 659
AfaI GTAC 4 cut(s) 506, 914, 1378, 1795
AfeI AGCGCT 1 cut(s) 627
AfiI CCNNNNNNNGG 3 cut(s) 993, 1048, 1197
AflIII ACRYGT 1 cut(s) 807
AjnI CCWGG 1 cut(s) 313
AluBI AGCT 7 cut(s) 97, 714, 728, 1256, 1347, 1407, 1703
AluI AGCT 7 cut(s) 97, 714, 728, 1256, 1347, 1407, 1703
Alw21I GWGCWC 2 cut(s) 799, 1349
Alw26I GTCTC 1 cut(s) 936
Alw44I GTGCAC 1 cut(s) 795
AlwI GGATC 2 cut(s) 400, 757
Aor13HI TCCGGA 1 cut(s) 852
Aor51HI AGCGCT 1 cut(s) 627
AoxI GGCC 5 cut(s) 1036, 1129, 1143, 1188, 1575
ApaLI GTGCAC 1 cut(s) 795
ApeKI GCWGC 3 cut(s) 902, 905, 1404
ApoI RAATTY 2 cut(s) 644, 1736
ArsI GACNNNNNNTTYG 2 cut(s) 254, 286
AseI ATTAAT 1 cut(s) 393
Asp700I GAANNNNTTC 2 cut(s) 627, 648
AspLEI GCGC 4 cut(s) 613, 628, 669, 1468
AspS9I GGNCC 1 cut(s) 276
AsuC2I CCSGG 1 cut(s) 1398
AsuHPI GGTGA 3 cut(s) 31, 169, 976
AsuII TTCGAA 1 cut(s) 776
AsuNHI GCTAGC 1 cut(s) 1256
AvaII GGWCC 1 cut(s) 276
BaeGI GKGCMC 2 cut(s) 799, 1205
BanII GRGCYC 1 cut(s) 1349
BarI GAAGNNNNNNTAC 2 cut(s) 712, 744
Bbv12I GWGCWC 2 cut(s) 799, 1349
BbvI GCAGC 3 cut(s) 889, 917, 1416
BceAI ACGGC 1 cut(s) 1280
BciT130I CCWGG 1 cut(s) 315
BclI TGATCA 1 cut(s) 1653
BcnI CCSGG 1 cut(s) 1398
BcoDI GTCTC 1 cut(s) 936
BfaI CTAG 4 cut(s) 690, 1025, 1154, 1257
BfmI CTRYAG 2 cut(s) 903, 1590
BfoI RGCGCY 2 cut(s) 629, 670
BisI GCNGC 4 cut(s) 144, 903, 906, 1405
BlsI GCNGC 4 cut(s) 145, 904, 907, 1406
Bme1390I CCNGG 2 cut(s) 315, 1398
Bme18I GGWCC 1 cut(s) 276
BmgT120I GGNCC 1 cut(s) 276
BmiI GGNNCC 3 cut(s) 121, 212, 258
BmrFI CCNGG 2 cut(s) 315, 1398
BmrI ACTGGG 1 cut(s) 435
BmsI GCATC 3 cut(s) 333, 1102, 1391
BmtI GCTAGC 1 cut(s) 1260
BmuI ACTGGG 1 cut(s) 435
BoxI GACNNNNGTC 1 cut(s) 306
BplI GAGNNNNNCTC 2 cut(s) 916, 948
BpmI CTGGAG 1 cut(s) 1467
Bpu14I TTCGAA 1 cut(s) 776
BpuEI CTTGAG 1 cut(s) 1696
BpuMI CCSGG 1 cut(s) 1398
Bsa29I ATCGAT 1 cut(s) 957
BsaAI YACGTR 1 cut(s) 1101
BsaHI GRCGYC 1 cut(s) 659
BsaJI CCNNGG 1 cut(s) 1578
BsaWI WCCGGW 2 cut(s) 155, 852
Bsc4I CCNNNNNNNGG 3 cut(s) 993, 1048, 1197
Bse118I RCCGGY 1 cut(s) 1131
Bse1I ACTGG 4 cut(s) 430, 804, 1132, 1554
Bse3DI GCAATG 1 cut(s) 523
BseAI TCCGGA 1 cut(s) 852
BseBI CCWGG 1 cut(s) 315
BseCI ATCGAT 1 cut(s) 957
BseDI CCNNGG 1 cut(s) 1578
BseGI GGATG 3 cut(s) 1406, 1457, 1567
BseLI CCNNNNNNNGG 3 cut(s) 993, 1048, 1197
BseMI GCAATG 1 cut(s) 523
BseMII CTCAG 2 cut(s) 339, 433
BseNI ACTGG 4 cut(s) 430, 804, 1132, 1554
BseRI GAGGAG 2 cut(s) 1583, 1586
BseSI GKGCMC 2 cut(s) 799, 1205
BseXI GCAGC 3 cut(s) 889, 917, 1416
BseYI CCCAGC 2 cut(s) 1168, 1407
Bsh1236I CGCG 3 cut(s) 383, 611, 1468
BshFI GGCC 5 cut(s) 1038, 1131, 1145, 1190, 1577
BshVI ATCGAT 1 cut(s) 957
BsiHKAI GWGCWC 2 cut(s) 799, 1349
BsiSI CCGG 7 cut(s) 100, 117, 156, 254, 853, 1132, 1398
BslFI GGGAC 1 cut(s) 1560
BslI CCNNNNNNNGG 3 cut(s) 993, 1048, 1197
BsmAI GTCTC 1 cut(s) 936
BsmFI GGGAC 1 cut(s) 1560
BsmI GAATGC 2 cut(s) 136, 1090
BsnI GGCC 5 cut(s) 1038, 1131, 1145, 1190, 1577
Bsp119I TTCGAA 1 cut(s) 776
Bsp1286I GDGCHC 3 cut(s) 799, 1205, 1349
Bsp13I TCCGGA 1 cut(s) 852
Bsp143I GATC 5 cut(s) 405, 749, 954, 1354, 1653
Bsp68I TCGCGA 1 cut(s) 383
BspACI CCGC 6 cut(s) 42, 58, 123, 141, 144, 1292
BspANI GGCC 5 cut(s) 1038, 1131, 1145, 1190, 1577
BspCNI CTCAG 2 cut(s) 340, 432
BspDI ATCGAT 1 cut(s) 957
BspEI TCCGGA 1 cut(s) 852
BspFNI CGCG 3 cut(s) 383, 611, 1468
BspHI TCATGA 2 cut(s) 1351, 1696
BspLI GGNNCC 3 cut(s) 121, 212, 258
BspMAI CTGCAG 1 cut(s) 907
BspOI GCTAGC 1 cut(s) 1260
BspPI GGATC 2 cut(s) 400, 757
BspQI GCTCTTC 1 cut(s) 493
BspT104I TTCGAA 1 cut(s) 776
BsrDI GCAATG 1 cut(s) 523
BsrFI RCCGGY 1 cut(s) 1131
BsrI ACTGG 4 cut(s) 430, 804, 1132, 1554
BssAI RCCGGY 1 cut(s) 1131
BssECI CCNNGG 1 cut(s) 1578
BssMI GATC 5 cut(s) 405, 749, 954, 1354, 1653
BssNI GRCGYC 1 cut(s) 659
BssT1I CCWWGG 1 cut(s) 1578
Bst2UI CCWGG 1 cut(s) 315
Bst4CI ACNGT 8 cut(s) 72, 107, 200, 240, 388, 874, 1591, 1604
Bst6I CTCTTC 2 cut(s) 493, 939
BstACI GRCGYC 1 cut(s) 659
BstBAI YACGTR 1 cut(s) 1101
BstBI TTCGAA 1 cut(s) 776
BstC8I GCNNGC 5 cut(s) 232, 712, 1005, 1133, 1258
BstDEI CTNAG 3 cut(s) 348, 419, 1358
BstF5I GGATG 3 cut(s) 1406, 1457, 1567
BstFNI CGCG 3 cut(s) 383, 611, 1468
BstH2I RGCGCY 2 cut(s) 629, 670
BstHHI GCGC 4 cut(s) 613, 628, 669, 1468
BstKTI GATC 5 cut(s) 408, 752, 957, 1357, 1656
BstMAI GTCTC 1 cut(s) 936
BstMBI GATC 5 cut(s) 405, 749, 954, 1354, 1653
BstMWI GCNNNNNNNGC 4 cut(s) 41, 608, 625, 1253
BstNI CCWGG 1 cut(s) 315
BstNSI RCATGY 2 cut(s) 811, 1007
BstPAI GACNNNNGTC 1 cut(s) 306
BstSCI CCNGG 2 cut(s) 313, 1396
BstSFI CTRYAG 2 cut(s) 903, 1590
BstSLI GKGCMC 2 cut(s) 799, 1205
BstUI CGCG 3 cut(s) 383, 611, 1468
BstV1I GCAGC 3 cut(s) 889, 917, 1416
Bsu15I ATCGAT 1 cut(s) 957
BsuRI GGCC 5 cut(s) 1038, 1131, 1145, 1190, 1577
BsuTUI ATCGAT 1 cut(s) 957
BtgZI GCGATG 1 cut(s) 1228
BtsCI GGATG 3 cut(s) 1406, 1457, 1567
BtsI GCAGTG 1 cut(s) 131
BtsIMutI CAGTG 4 cut(s) 103, 131, 797, 1609
BtuMI TCGCGA 1 cut(s) 383
Cac8I GCNNGC 5 cut(s) 232, 712, 1005, 1133, 1258
CciI TCATGA 2 cut(s) 1351, 1696
CfoI GCGC 4 cut(s) 613, 628, 669, 1468
Cfr10I RCCGGY 1 cut(s) 1131
Cfr13I GGNCC 1 cut(s) 276
ClaI ATCGAT 1 cut(s) 957
CseI GACGC 1 cut(s) 1093
Csp6I GTAC 4 cut(s) 505, 913, 1377, 1794
CspCI CAANNNNNGTGG 2 cut(s) 879, 914
CviQI GTAC 4 cut(s) 505, 913, 1377, 1794
DdeI CTNAG 3 cut(s) 348, 419, 1358
DpnI GATC 5 cut(s) 407, 751, 956, 1356, 1655
DpnII GATC 5 cut(s) 405, 749, 954, 1354, 1653
EaeI YGGCCR 1 cut(s) 1129
Eam1104I CTCTTC 2 cut(s) 493, 939
EarI CTCTTC 2 cut(s) 493, 939
EciI GGCGGA 1 cut(s) 130
Ecl136II GAGCTC 1 cut(s) 1347
Eco130I CCWWGG 1 cut(s) 1578
Eco147I AGGCCT 3 cut(s) 1038, 1145, 1190
Eco24I GRGCYC 1 cut(s) 1349
Eco47I GGWCC 1 cut(s) 276
Eco47III AGCGCT 1 cut(s) 627
Eco53kI GAGCTC 1 cut(s) 1347
EcoICRI GAGCTC 1 cut(s) 1347
EcoRII CCWGG 1 cut(s) 313
EcoT14I CCWWGG 1 cut(s) 1578
EcoT38I GRGCYC 1 cut(s) 1349
ErhI CCWWGG 1 cut(s) 1578
FalI AAGNNNNNCTT 2 cut(s) 1768, 1800
FaqI GGGAC 1 cut(s) 1560
FauI CCCGC 2 cut(s) 65, 1285
FbaI TGATCA 1 cut(s) 1653
FblI GTMKAC 2 cut(s) 300, 1239
Fnu4HI GCNGC 4 cut(s) 144, 903, 906, 1405
FokI GGATG 3 cut(s) 1413, 1444, 1574
FriOI GRGCYC 1 cut(s) 1349
Fsp4HI GCNGC 4 cut(s) 144, 903, 906, 1405
FspBI CTAG 4 cut(s) 690, 1025, 1154, 1257
GlaI GCGC 4 cut(s) 612, 627, 668, 1467
GluI GCNGC 4 cut(s) 144, 903, 906, 1405
GsaI CCCAGC 2 cut(s) 1172, 1411
GsuI CTGGAG 1 cut(s) 1467
HaeII RGCGCY 2 cut(s) 629, 670
HaeIII GGCC 5 cut(s) 1038, 1131, 1145, 1190, 1577
HapII CCGG 7 cut(s) 100, 117, 156, 254, 853, 1132, 1398
HgaI GACGC 1 cut(s) 1093
HhaI GCGC 4 cut(s) 613, 628, 669, 1468
Hin1I GRCGYC 1 cut(s) 659
Hin6I GCGC 4 cut(s) 611, 626, 667, 1466
HinP1I GCGC 4 cut(s) 611, 626, 667, 1466
HincII GTYRAC 1 cut(s) 301
HindII GTYRAC 1 cut(s) 301
HindIII AAGCTT 2 cut(s) 712, 1701
HpaII CCGG 7 cut(s) 100, 117, 156, 254, 853, 1132, 1398
HphI GGTGA 3 cut(s) 31, 169, 976
Hpy166II GTNNAC 6 cut(s) 276, 301, 375, 797, 805, 1240
Hpy188I TCNGA 6 cut(s) 215, 422, 664, 841, 864, 1366
Hpy188III TCNNGA 7 cut(s) 382, 641, 853, 947, 1352, 1697, 1729
Hpy8I GTNNAC 6 cut(s) 276, 301, 375, 797, 805, 1240
Hpy99I CGWCG 1 cut(s) 1109
HpyAV CCTTC 4 cut(s) 424, 1028, 1227, 1499
HpyCH4III ACNGT 8 cut(s) 72, 107, 200, 240, 388, 874, 1591, 1604
HpyCH4IV ACGT 4 cut(s) 264, 659, 1100, 1302
HpyF10VI GCNNNNNNNGC 4 cut(s) 41, 608, 625, 1253
HpyF3I CTNAG 3 cut(s) 348, 419, 1358
HpySE526I ACGT 4 cut(s) 264, 659, 1100, 1302
Hsp92I GRCGYC 1 cut(s) 659
HspAI GCGC 4 cut(s) 611, 626, 667, 1466
Kpn2I TCCGGA 1 cut(s) 852
KroI GCCGGC 1 cut(s) 1131
KroNI GCCGGC 1 cut(s) 1133
Ksp22I TGATCA 1 cut(s) 1653
Kzo9I GATC 5 cut(s) 405, 749, 954, 1354, 1653
LguI GCTCTTC 1 cut(s) 493
LmnI GCTCC 4 cut(s) 102, 125, 216, 1473
Lsp1109I GCAGC 3 cut(s) 889, 917, 1416
LweI GCATC 3 cut(s) 333, 1102, 1391
MaeI CTAG 4 cut(s) 690, 1025, 1154, 1257
MaeII ACGT 4 cut(s) 264, 659, 1100, 1302
MaeIII GTNAC 3 cut(s) 129, 982, 1303
MalI GATC 5 cut(s) 407, 751, 956, 1356, 1655
MboI GATC 5 cut(s) 405, 749, 954, 1354, 1653
MboII GAAGA 5 cut(s) 228, 352, 480, 926, 1681
MfeI CAATTG 1 cut(s) 585
MhlI GDGCHC 3 cut(s) 799, 1205, 1349
MluCI AATT 6 cut(s) 75, 585, 644, 756, 1713, 1736
MlyI GAGTC 3 cut(s) 137, 1268, 1418
MmeI TCCRAC 1 cut(s) 1066
MroI TCCGGA 1 cut(s) 852
MroNI GCCGGC 1 cut(s) 1131
MroXI GAANNNNTTC 2 cut(s) 627, 648
MseI TTAA 3 cut(s) 393, 1712, 1755
MslI CAYNNNNRTG 1 cut(s) 890
MspA1I CMGCKG 1 cut(s) 1407
MspI CCGG 7 cut(s) 100, 117, 156, 254, 853, 1132, 1398
MspR9I CCNGG 2 cut(s) 315, 1398
MunI CAATTG 1 cut(s) 585
Mva1269I GAATGC 2 cut(s) 136, 1090
MvaI CCWGG 1 cut(s) 315
MvnI CGCG 3 cut(s) 383, 611, 1468
MwoI GCNNNNNNNGC 4 cut(s) 41, 608, 625, 1253
NaeI GCCGGC 1 cut(s) 1133
NciI CCSGG 1 cut(s) 1398
NdeII GATC 5 cut(s) 405, 749, 954, 1354, 1653
NgoMIV GCCGGC 1 cut(s) 1131
NheI GCTAGC 1 cut(s) 1256
NlaIV GGNNCC 3 cut(s) 121, 212, 258
NmuCI GTSAC 3 cut(s) 129, 982, 1303
NruI TCGCGA 1 cut(s) 383
NspI RCATGY 2 cut(s) 811, 1007
NspV TTCGAA 1 cut(s) 776
PaeI GCATGC 1 cut(s) 1007
PagI TCATGA 2 cut(s) 1351, 1696
PceI AGGCCT 3 cut(s) 1038, 1145, 1190
PciI ACATGT 1 cut(s) 807
PciSI GCTCTTC 1 cut(s) 493
PcsI WCGNNNNNNNCGW 1 cut(s) 1146
PctI GAATGC 2 cut(s) 136, 1090
PdiI GCCGGC 1 cut(s) 1133
PdmI GAANNNNTTC 2 cut(s) 627, 648
PfeI GAWTC 7 cut(s) 113, 219, 548, 773, 859, 865, 1052
PflMI CCANNNNNTGG 1 cut(s) 1048
PkrI GCNGC 4 cut(s) 145, 904, 907, 1406
PleI GAGTC 3 cut(s) 136, 1268, 1418
PpsI GAGTC 3 cut(s) 136, 1268, 1418
Ppu21I YACGTR 1 cut(s) 1101
PscI ACATGT 1 cut(s) 807
PshAI GACNNNNGTC 1 cut(s) 306
PshBI ATTAAT 1 cut(s) 393
Psp124BI GAGCTC 1 cut(s) 1349
Psp1406I AACGTT 1 cut(s) 264
Psp6I CCWGG 1 cut(s) 313
PspFI CCCAGC 2 cut(s) 1168, 1407
PspGI CCWGG 1 cut(s) 313
PspN4I GGNNCC 3 cut(s) 121, 212, 258
PspPI GGNCC 1 cut(s) 276
PstI CTGCAG 1 cut(s) 907
PvuII CAGCTG 1 cut(s) 1407
RruI TCGCGA 1 cut(s) 383
RsaI GTAC 4 cut(s) 506, 914, 1378, 1795
RsaNI GTAC 4 cut(s) 505, 913, 1377, 1794
RseI CAYNNNNRTG 1 cut(s) 890
SacI GAGCTC 1 cut(s) 1349
SalI GTCGAC 1 cut(s) 299
SapI GCTCTTC 1 cut(s) 493
SaqAI TTAA 3 cut(s) 393, 1712, 1755
SatI GCNGC 4 cut(s) 144, 903, 906, 1405
Sau3AI GATC 5 cut(s) 405, 749, 954, 1354, 1653
Sau96I GGNCC 1 cut(s) 276
SchI GAGTC 3 cut(s) 137, 1268, 1418
ScrFI CCNGG 2 cut(s) 315, 1398
SduI GDGCHC 3 cut(s) 799, 1205, 1349
SfaNI GCATC 3 cut(s) 333, 1102, 1391
SfcI CTRYAG 2 cut(s) 903, 1590
SfuI TTCGAA 1 cut(s) 776
SinI GGWCC 1 cut(s) 276
SmiMI CAYNNNNRTG 1 cut(s) 890
SmlI CTYRAG 1 cut(s) 1675
SmoI CTYRAG 1 cut(s) 1675
SphI GCATGC 1 cut(s) 1007
Sse9I AATT 6 cut(s) 75, 585, 644, 756, 1713, 1736
SseBI AGGCCT 3 cut(s) 1038, 1145, 1190
SsiI CCGC 6 cut(s) 42, 58, 123, 141, 144, 1292
SspI AATATT 2 cut(s) 836, 1077
SspMI CTAG 4 cut(s) 690, 1025, 1154, 1257
SstI GAGCTC 1 cut(s) 1349
StuI AGGCCT 3 cut(s) 1038, 1145, 1190
StyD4I CCNGG 2 cut(s) 313, 1396
StyI CCWWGG 1 cut(s) 1578
TaaI ACNGT 8 cut(s) 72, 107, 200, 240, 388, 874, 1591, 1604
TaiI ACGT 4 cut(s) 267, 662, 1103, 1305
TaqI TCGA 7 cut(s) 300, 404, 551, 640, 776, 957, 1728
TasI AATT 6 cut(s) 75, 585, 644, 756, 1713, 1736
TauI GCSGC 1 cut(s) 146
TfiI GAWTC 7 cut(s) 113, 219, 548, 773, 859, 865, 1052
Tru1I TTAA 3 cut(s) 393, 1712, 1755
Tru9I TTAA 3 cut(s) 393, 1712, 1755
TscAI CASTG 4 cut(s) 110, 138, 804, 1609
TseFI GTSAC 3 cut(s) 129, 982, 1303
TseI GCWGC 3 cut(s) 902, 905, 1404
Tsp45I GTSAC 3 cut(s) 129, 982, 1303
TspGWI ACGGA 3 cut(s) 930, 1245, 1347
TspRI CASTG 4 cut(s) 110, 138, 804, 1609
Van91I CCANNNNNTGG 1 cut(s) 1048
VneI GTGCAC 1 cut(s) 795
VpaK11BI GGWCC 1 cut(s) 276
VspI ATTAAT 1 cut(s) 393
XapI RAATTY 2 cut(s) 644, 1736
XceI RCATGY 2 cut(s) 811, 1007
XmiI GTMKAC 2 cut(s) 300, 1239
XmnI GAANNNNTTC 2 cut(s) 627, 648
XspI CTAG 4 cut(s) 690, 1025, 1154, 1257
ZraI GACGTC 1 cut(s) 660
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.