U-box domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g01981 |
| malus_domestica | MD13G1203200.v1.1 MD16G1204600.v1.1 |
| prunus_persica | Prupe.1G025700_v2.0.a1 Prupe.1G025700_v2.0.a1 Prupe.1G025700_v2.0.a1 |
| pyrus_communis | pycom13g17650 pycom16g17270 |
| rosa_chinensis | RchiOBHm_Chr4g0388951 |
| rosa_laevigata | RLG00000010004 |
| rosa_multiflora | Rmu_sc0001395.1_g000012 |
| rosa_roxburghii | Rroxscaffold_5G00335270 |
| rosa_rugosa | Rorug03G0321600 |
| rosa_samantha | Rh4AG026100 Rh4BG019300 Rh4CG029100 Rh4DG019800 |
| rosa_wichuraiana | Rw0G003670 Rw4G001880 Rw4G001920 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1142 |
| AatII | GACGTC | 1 cut(s) | 1049 |
| Acc65I | GGTACC | 1 cut(s) | 32 |
| AccB1I | GGYRCC | 2 cut(s) | 32, 556 |
| AccI | GTMKAC | 1 cut(s) | 1509 |
| AccIII | TCCGGA | 1 cut(s) | 1869 |
| AciI | CCGC | 3 cut(s) | 867, 1605, 2863 |
| AclI | AACGTT | 1 cut(s) | 2905 |
| AclWI | GGATC | 7 cut(s) | 151, 752, 1000, 1121, 2288, 2301, 2812 |
| AcoI | YGGCCR | 1 cut(s) | 2860 |
| AcsI | RAATTY | 6 cut(s) | 1093, 1159, 1516, 1745, 1772, 2014 |
| AcuI | CTGAAG | 1 cut(s) | 663 |
| AcyI | GRCGYC | 1 cut(s) | 1046 |
| AdeI | CACNNNGTG | 1 cut(s) | 2513 |
| AfaI | GTAC | 5 cut(s) | 34, 257, 315, 850, 1291 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 750, 1321, 2466, 2663 |
| AflII | CTTAAG | 2 cut(s) | 785, 1063 |
| AflIII | ACRYGT | 1 cut(s) | 854 |
| AhlI | ACTAGT | 1 cut(s) | 1489 |
| AjnI | CCWGG | 6 cut(s) | 57, 326, 508, 1737, 2304, 2882 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1838, 1870 |
| Alw21I | GWGCWC | 2 cut(s) | 271, 2278 |
| Alw26I | GTCTC | 5 cut(s) | 456, 955, 1004, 1037, 2452 |
| AlwI | GGATC | 7 cut(s) | 151, 752, 1000, 1121, 2288, 2301, 2812 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2381 |
| Ama87I | CYCGRG | 1 cut(s) | 681 |
| Aor13HI | TCCGGA | 1 cut(s) | 1869 |
| AoxI | GGCC | 7 cut(s) | 505, 741, 1059, 1454, 1857, 1874, 2860 |
| ApoI | RAATTY | 6 cut(s) | 1093, 1159, 1516, 1745, 1772, 2014 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1580, 1612 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 774, 1373, 2064, 2619, 2731 |
| Asp718I | GGTACC | 1 cut(s) | 32 |
| AspS9I | GGNCC | 5 cut(s) | 115, 210, 506, 1454, 2367 |
| AsuC2I | CCSGG | 1 cut(s) | 2937 |
| AsuHPI | GGTGA | 7 cut(s) | 412, 1123, 1189, 1492, 1544, 1813, 2431 |
| AsuII | TTCGAA | 2 cut(s) | 122, 2912 |
| AsuNHI | GCTAGC | 1 cut(s) | 1684 |
| AvaI | CYCGRG | 1 cut(s) | 681 |
| AvaII | GGWCC | 3 cut(s) | 115, 210, 2367 |
| AxyI | CCTNAGG | 1 cut(s) | 2046 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2500, 2533 |
| BamHI | GGATCC | 1 cut(s) | 2293 |
| BanI | GGYRCC | 2 cut(s) | 32, 556 |
| BanII | GRGCYC | 1 cut(s) | 570 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1530, 1562 |
| BbsI | GAAGAC | 1 cut(s) | 2750 |
| Bbv12I | GWGCWC | 2 cut(s) | 271, 2278 |
| BccI | CCATC | 8 cut(s) | 44, 814, 1757, 2128, 2201, 2491, 2618, 2852 |
| BcgI | CGANNNNNNTGC | 8 cut(s) | 112, 146, 512, 546, 1205, 1239, 2545, 2579 |
| BciT130I | CCWGG | 6 cut(s) | 59, 328, 510, 1739, 2306, 2884 |
| BclI | TGATCA | 4 cut(s) | 394, 493, 1194, 1978 |
| BcnI | CCSGG | 1 cut(s) | 2937 |
| BcoDI | GTCTC | 5 cut(s) | 456, 955, 1004, 1037, 2452 |
| BcuI | ACTAGT | 1 cut(s) | 1489 |
| BfaI | CTAG | 6 cut(s) | 1490, 1685, 1802, 1961, 2814, 2838 |
| BfmI | CTRYAG | 3 cut(s) | 161, 2397, 2521 |
| BfrI | CTTAAG | 2 cut(s) | 785, 1063 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 2080 |
| BglII | AGATCT | 1 cut(s) | 1078 |
| BlpI | GCTNAGC | 1 cut(s) | 2503 |
| Bme1390I | CCNGG | 7 cut(s) | 59, 328, 510, 1739, 2306, 2884, 2937 |
| Bme18I | GGWCC | 3 cut(s) | 115, 210, 2367 |
| BmeT110I | CYCGRG | 1 cut(s) | 681 |
| BmgT120I | GGNCC | 5 cut(s) | 115, 210, 506, 1454, 2367 |
| BmiI | GGNNCC | 7 cut(s) | 34, 211, 212, 558, 2102, 2295, 2668 |
| BmrFI | CCNGG | 7 cut(s) | 59, 328, 510, 1739, 2306, 2884, 2937 |
| BmsI | GCATC | 6 cut(s) | 175, 411, 679, 1903, 2116, 2680 |
| BmtI | GCTAGC | 1 cut(s) | 1688 |
| BpiI | GAAGAC | 1 cut(s) | 2750 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 662, 694 |
| BpmI | CTGGAG | 2 cut(s) | 1760, 2105 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2503 |
| Bpu14I | TTCGAA | 2 cut(s) | 122, 2912 |
| BpuEI | CTTGAG | 4 cut(s) | 938, 986, 2054, 2126 |
| BpuMI | CCSGG | 1 cut(s) | 2937 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1193 |
| BsaHI | GRCGYC | 1 cut(s) | 1046 |
| BsaI | GGTCTC | 1 cut(s) | 2452 |
| BsaJI | CCNNGG | 9 cut(s) | 327, 502, 508, 570, 1017, 1153, 1608, 2442, 2883 |
| BsaWI | WCCGGW | 1 cut(s) | 1869 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 2413, 2443, 2658, 2688 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 750, 1321, 2466, 2663 |
| Bse1I | ACTGG | 7 cut(s) | 830, 850, 1115, 1249, 1824, 2208, 2670 |
| Bse21I | CCTNAGG | 1 cut(s) | 2046 |
| Bse3DI | GCAATG | 2 cut(s) | 549, 1713 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1193 |
| BseAI | TCCGGA | 1 cut(s) | 1869 |
| BseBI | CCWGG | 6 cut(s) | 59, 328, 510, 1739, 2306, 2884 |
| BseDI | CCNNGG | 9 cut(s) | 327, 502, 508, 570, 1017, 1153, 1608, 2442, 2883 |
| BseGI | GGATG | 6 cut(s) | 951, 1768, 2128, 2212, 2483, 2863 |
| BseJI | GATNNNNATC | 1 cut(s) | 1193 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 750, 1321, 2466, 2663 |
| BseMI | GCAATG | 2 cut(s) | 549, 1713 |
| BseMII | CTCAG | 8 cut(s) | 467, 950, 1335, 2004, 2037, 2377, 2388, 2517 |
| BseNI | ACTGG | 7 cut(s) | 830, 850, 1115, 1249, 1824, 2208, 2670 |
| BseRI | GAGGAG | 3 cut(s) | 2349, 2646, 2679 |
| BsgI | GTGCAG | 3 cut(s) | 313, 758, 1425 |
| BshFI | GGCC | 7 cut(s) | 507, 743, 1061, 1456, 1859, 1876, 2862 |
| BshNI | GGYRCC | 2 cut(s) | 32, 556 |
| BsiHKAI | GWGCWC | 2 cut(s) | 271, 2278 |
| BsiHKCI | CYCGRG | 1 cut(s) | 681 |
| BsiSI | CCGG | 5 cut(s) | 1457, 1870, 2460, 2487, 2936 |
| BslFI | GGGAC | 2 cut(s) | 196, 2257 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 750, 1321, 2466, 2663 |
| BsmAI | GTCTC | 5 cut(s) | 456, 955, 1004, 1037, 2452 |
| BsmBI | CGTCTC | 1 cut(s) | 1037 |
| BsmFI | GGGAC | 2 cut(s) | 196, 2257 |
| BsnI | GGCC | 7 cut(s) | 507, 743, 1061, 1456, 1859, 1876, 2862 |
| Bso31I | GGTCTC | 1 cut(s) | 2452 |
| BsoBI | CYCGRG | 1 cut(s) | 681 |
| Bsp119I | TTCGAA | 2 cut(s) | 122, 2912 |
| Bsp1286I | GDGCHC | 3 cut(s) | 271, 570, 2278 |
| Bsp13I | TCCGGA | 1 cut(s) | 1869 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2503 |
| Bsp19I | CCATGG | 1 cut(s) | 2442 |
| BspACI | CCGC | 3 cut(s) | 867, 1605, 2863 |
| BspANI | GGCC | 7 cut(s) | 507, 743, 1061, 1456, 1859, 1876, 2862 |
| BspCNI | CTCAG | 8 cut(s) | 466, 951, 1336, 2003, 2038, 2376, 2387, 2516 |
| BspEI | TCCGGA | 1 cut(s) | 1869 |
| BspHI | TCATGA | 1 cut(s) | 2851 |
| BspLI | GGNNCC | 7 cut(s) | 34, 211, 212, 558, 2102, 2295, 2668 |
| BspMAI | CTGCAG | 2 cut(s) | 2401, 2525 |
| BspOI | GCTAGC | 1 cut(s) | 1688 |
| BspPI | GGATC | 7 cut(s) | 151, 752, 1000, 1121, 2288, 2301, 2812 |
| BspT104I | TTCGAA | 2 cut(s) | 122, 2912 |
| BspT107I | GGYRCC | 2 cut(s) | 32, 556 |
| BspTI | CTTAAG | 2 cut(s) | 785, 1063 |
| BspTNI | GGTCTC | 1 cut(s) | 2452 |
| BsrDI | GCAATG | 2 cut(s) | 549, 1713 |
| BsrI | ACTGG | 7 cut(s) | 830, 850, 1115, 1249, 1824, 2208, 2670 |
| BssECI | CCNNGG | 9 cut(s) | 327, 502, 508, 570, 1017, 1153, 1608, 2442, 2883 |
| BssNI | GRCGYC | 1 cut(s) | 1046 |
| BssT1I | CCWWGG | 4 cut(s) | 502, 1017, 1608, 2442 |
| Bst2UI | CCWGG | 6 cut(s) | 59, 328, 510, 1739, 2306, 2884 |
| Bst4CI | ACNGT | 4 cut(s) | 450, 817, 1330, 2513 |
| Bst6I | CTCTTC | 4 cut(s) | 969, 1175, 2033, 2739 |
| BstACI | GRCGYC | 1 cut(s) | 1046 |
| BstAFI | CTTAAG | 2 cut(s) | 785, 1063 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 200, 736 |
| BstBI | TTCGAA | 2 cut(s) | 122, 2912 |
| BstC8I | GCNNGC | 9 cut(s) | 201, 296, 367, 531, 591, 741, 1224, 1686, 1878 |
| BstDSI | CCRYGG | 1 cut(s) | 2442 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 1319, 2661 |
| BstF5I | GGATG | 6 cut(s) | 951, 1768, 2128, 2212, 2483, 2863 |
| BstMAI | GTCTC | 5 cut(s) | 456, 955, 1004, 1037, 2452 |
| BstNI | CCWGG | 6 cut(s) | 59, 328, 510, 1739, 2306, 2884 |
| BstNSI | RCATGY | 3 cut(s) | 529, 858, 1226 |
| BstSCI | CCNGG | 7 cut(s) | 57, 326, 508, 1737, 2304, 2882, 2935 |
| BstSFI | CTRYAG | 3 cut(s) | 161, 2397, 2521 |
| BstV2I | GAAGAC | 1 cut(s) | 2750 |
| BstX2I | RGATCY | 3 cut(s) | 1005, 1078, 2293 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2305 |
| BstYI | RGATCY | 3 cut(s) | 1005, 1078, 2293 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2046 |
| BsuRI | GGCC | 7 cut(s) | 507, 743, 1061, 1456, 1859, 1876, 2862 |
| BtgI | CCRYGG | 1 cut(s) | 2442 |
| BtsCI | GGATG | 6 cut(s) | 951, 1768, 2128, 2212, 2483, 2863 |
| BtsI | GCAGTG | 3 cut(s) | 1636, 1941, 2530 |
| BtsIMutI | CAGTG | 7 cut(s) | 843, 956, 1636, 1941, 2382, 2530, 2677 |
| Cac8I | GCNNGC | 9 cut(s) | 201, 296, 367, 531, 591, 741, 1224, 1686, 1878 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2381 |
| CciI | TCATGA | 1 cut(s) | 2851 |
| Cfr13I | GGNCC | 5 cut(s) | 115, 210, 506, 1454, 2367 |
| CseI | GACGC | 1 cut(s) | 2693 |
| CsiI | ACCWGGT | 1 cut(s) | 57 |
| Csp6I | GTAC | 5 cut(s) | 33, 256, 314, 849, 1290 |
| CviQI | GTAC | 5 cut(s) | 33, 256, 314, 849, 1290 |
| DraI | TTTAAA | 2 cut(s) | 796, 1320 |
| DraIII | CACNNNGTG | 1 cut(s) | 2513 |
| EaeI | YGGCCR | 1 cut(s) | 2860 |
| Eam1104I | CTCTTC | 4 cut(s) | 969, 1175, 2033, 2739 |
| EarI | CTCTTC | 4 cut(s) | 969, 1175, 2033, 2739 |
| EciI | GGCGGA | 1 cut(s) | 1594 |
| Eco130I | CCWWGG | 4 cut(s) | 502, 1017, 1608, 2442 |
| Eco147I | AGGCCT | 2 cut(s) | 1061, 1876 |
| Eco24I | GRGCYC | 1 cut(s) | 570 |
| Eco31I | GGTCTC | 1 cut(s) | 2452 |
| Eco32I | GATATC | 1 cut(s) | 390 |
| Eco47I | GGWCC | 3 cut(s) | 115, 210, 2367 |
| Eco57I | CTGAAG | 1 cut(s) | 663 |
| Eco81I | CCTNAGG | 1 cut(s) | 2046 |
| Eco88I | CYCGRG | 1 cut(s) | 681 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 1319, 2661 |
| EcoO109I | RGGNCCY | 2 cut(s) | 115, 210 |
| EcoRI | GAATTC | 1 cut(s) | 1093 |
| EcoRII | CCWGG | 6 cut(s) | 57, 326, 508, 1737, 2304, 2882 |
| EcoRV | GATATC | 1 cut(s) | 390 |
| EcoT14I | CCWWGG | 4 cut(s) | 502, 1017, 1608, 2442 |
| EcoT38I | GRGCYC | 1 cut(s) | 570 |
| ErhI | CCWWGG | 4 cut(s) | 502, 1017, 1608, 2442 |
| Esp3I | CGTCTC | 1 cut(s) | 1037 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 187, 219 |
| FaqI | GGGAC | 2 cut(s) | 196, 2257 |
| FbaI | TGATCA | 4 cut(s) | 394, 493, 1194, 1978 |
| FblI | GTMKAC | 1 cut(s) | 1509 |
| FokI | GGATG | 6 cut(s) | 938, 1775, 2135, 2219, 2470, 2870 |
| FriOI | GRGCYC | 1 cut(s) | 570 |
| FspBI | CTAG | 6 cut(s) | 1490, 1685, 1802, 1961, 2814, 2838 |
| GsuI | CTGGAG | 2 cut(s) | 1760, 2105 |
| HaeIII | GGCC | 7 cut(s) | 507, 743, 1061, 1456, 1859, 1876, 2862 |
| HapII | CCGG | 5 cut(s) | 1457, 1870, 2460, 2487, 2936 |
| HgaI | GACGC | 1 cut(s) | 2693 |
| Hin1I | GRCGYC | 1 cut(s) | 1046 |
| HincII | GTYRAC | 3 cut(s) | 250, 1495, 1799 |
| HindII | GTYRAC | 3 cut(s) | 250, 1495, 1799 |
| HindIII | AAGCTT | 2 cut(s) | 1523, 2559 |
| HpaI | GTTAAC | 1 cut(s) | 1495 |
| HpaII | CCGG | 5 cut(s) | 1457, 1870, 2460, 2487, 2936 |
| HphI | GGTGA | 7 cut(s) | 412, 1123, 1189, 1492, 1544, 1813, 2431 |
| Hpy166II | GTNNAC | 7 cut(s) | 250, 1309, 1495, 1510, 1799, 2289, 2356 |
| Hpy8I | GTNNAC | 7 cut(s) | 250, 1309, 1495, 1510, 1799, 2289, 2356 |
| Hpy99I | CGWCG | 1 cut(s) | 2707 |
| HpyCH4III | ACNGT | 4 cut(s) | 450, 817, 1330, 2513 |
| HpyCH4IV | ACGT | 6 cut(s) | 271, 321, 1046, 2705, 2821, 2905 |
| HpySE526I | ACGT | 6 cut(s) | 271, 321, 1046, 2705, 2821, 2905 |
| Hsp92I | GRCGYC | 1 cut(s) | 1046 |
| KflI | GGGWCCC | 1 cut(s) | 210 |
| Kpn2I | TCCGGA | 1 cut(s) | 1869 |
| KpnI | GGTACC | 1 cut(s) | 36 |
| Ksp22I | TGATCA | 4 cut(s) | 394, 493, 1194, 1978 |
| KspAI | GTTAAC | 1 cut(s) | 1495 |
| LmnI | GCTCC | 3 cut(s) | 462, 2336, 2666 |
| LweI | GCATC | 6 cut(s) | 175, 411, 679, 1903, 2116, 2680 |
| MabI | ACCWGGT | 1 cut(s) | 57 |
| MaeI | CTAG | 6 cut(s) | 1490, 1685, 1802, 1961, 2814, 2838 |
| MaeII | ACGT | 6 cut(s) | 271, 321, 1046, 2705, 2821, 2905 |
| MaeIII | GTNAC | 7 cut(s) | 322, 408, 947, 1819, 2377, 2527, 2892 |
| MfeI | CAATTG | 2 cut(s) | 1592, 1815 |
| MflI | RGATCY | 3 cut(s) | 1005, 1078, 2293 |
| MhlI | GDGCHC | 3 cut(s) | 271, 570, 2278 |
| MlyI | GAGTC | 5 cut(s) | 1122, 1346, 1505, 1982, 2764 |
| MmeI | TCCRAC | 2 cut(s) | 1229, 2688 |
| MroI | TCCGGA | 1 cut(s) | 1869 |
| MroXI | GAANNNNTTC | 5 cut(s) | 774, 1373, 2064, 2619, 2731 |
| MslI | CAYNNNNRTG | 1 cut(s) | 2856 |
| MspA1I | CMGCKG | 1 cut(s) | 1343 |
| MspCI | CTTAAG | 2 cut(s) | 785, 1063 |
| MspI | CCGG | 5 cut(s) | 1457, 1870, 2460, 2487, 2936 |
| MspR9I | CCNGG | 7 cut(s) | 59, 328, 510, 1739, 2306, 2884, 2937 |
| MunI | CAATTG | 2 cut(s) | 1592, 1815 |
| MvaI | CCWGG | 6 cut(s) | 59, 328, 510, 1739, 2306, 2884 |
| NciI | CCSGG | 1 cut(s) | 2937 |
| NcoI | CCATGG | 1 cut(s) | 2442 |
| NheI | GCTAGC | 1 cut(s) | 1684 |
| NlaIV | GGNNCC | 7 cut(s) | 34, 211, 212, 558, 2102, 2295, 2668 |
| NmuCI | GTSAC | 4 cut(s) | 1819, 2377, 2527, 2892 |
| NspI | RCATGY | 3 cut(s) | 529, 858, 1226 |
| NspV | TTCGAA | 2 cut(s) | 122, 2912 |
| PaeI | GCATGC | 1 cut(s) | 1226 |
| PaeR7I | CTCGAG | 1 cut(s) | 681 |
| PagI | TCATGA | 1 cut(s) | 2851 |
| PceI | AGGCCT | 2 cut(s) | 1061, 1876 |
| PciI | ACATGT | 1 cut(s) | 854 |
| PdmI | GAANNNNTTC | 5 cut(s) | 774, 1373, 2064, 2619, 2731 |
| PfeI | GAWTC | 8 cut(s) | 182, 1583, 1846, 1899, 1996, 2309, 2732, 2848 |
| PfoI | TCCNGGA | 2 cut(s) | 1737, 2935 |
| PleI | GAGTC | 5 cut(s) | 1122, 1345, 1505, 1982, 2763 |
| PpsI | GAGTC | 5 cut(s) | 1122, 1345, 1505, 1982, 2763 |
| PpuMI | RGGWCCY | 2 cut(s) | 115, 210 |
| PscI | ACATGT | 1 cut(s) | 854 |
| PsiI | TTATAA | 1 cut(s) | 1142 |
| Psp1406I | AACGTT | 1 cut(s) | 2905 |
| Psp5II | RGGWCCY | 2 cut(s) | 115, 210 |
| Psp6I | CCWGG | 6 cut(s) | 57, 326, 508, 1737, 2304, 2882 |
| PspGI | CCWGG | 6 cut(s) | 57, 326, 508, 1737, 2304, 2882 |
| PspN4I | GGNNCC | 7 cut(s) | 34, 211, 212, 558, 2102, 2295, 2668 |
| PspPI | GGNCC | 5 cut(s) | 115, 210, 506, 1454, 2367 |
| PspPPI | RGGWCCY | 2 cut(s) | 115, 210 |
| PstI | CTGCAG | 2 cut(s) | 2401, 2525 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2381 |
| PsuI | RGATCY | 3 cut(s) | 1005, 1078, 2293 |
| PvuII | CAGCTG | 1 cut(s) | 1343 |
| RsaI | GTAC | 5 cut(s) | 34, 257, 315, 850, 1291 |
| RsaNI | GTAC | 5 cut(s) | 33, 256, 314, 849, 1290 |
| RseI | CAYNNNNRTG | 1 cut(s) | 2856 |
| Sau96I | GGNCC | 5 cut(s) | 115, 210, 506, 1454, 2367 |
| SchI | GAGTC | 5 cut(s) | 1122, 1346, 1505, 1982, 2764 |
| ScrFI | CCNGG | 7 cut(s) | 59, 328, 510, 1739, 2306, 2884, 2937 |
| SduI | GDGCHC | 3 cut(s) | 271, 570, 2278 |
| SexAI | ACCWGGT | 1 cut(s) | 57 |
| SfaNI | GCATC | 6 cut(s) | 175, 411, 679, 1903, 2116, 2680 |
| SfcI | CTRYAG | 3 cut(s) | 161, 2397, 2521 |
| Sfr274I | CTCGAG | 1 cut(s) | 681 |
| SfuI | TTCGAA | 2 cut(s) | 122, 2912 |
| SinI | GGWCC | 3 cut(s) | 115, 210, 2367 |
| SlaI | CTCGAG | 1 cut(s) | 681 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 2856 |
| SmlI | CTYRAG | 7 cut(s) | 681, 785, 917, 1001, 1063, 2069, 2105 |
| SmoI | CTYRAG | 7 cut(s) | 681, 785, 917, 1001, 1063, 2069, 2105 |
| SpeI | ACTAGT | 1 cut(s) | 1489 |
| SphI | GCATGC | 1 cut(s) | 1226 |
| SseBI | AGGCCT | 2 cut(s) | 1061, 1876 |
| SsiI | CCGC | 3 cut(s) | 867, 1605, 2863 |
| SspI | AATATT | 1 cut(s) | 1579 |
| SspMI | CTAG | 6 cut(s) | 1490, 1685, 1802, 1961, 2814, 2838 |
| StuI | AGGCCT | 2 cut(s) | 1061, 1876 |
| StyD4I | CCNGG | 7 cut(s) | 57, 326, 508, 1737, 2304, 2882, 2935 |
| StyI | CCWWGG | 4 cut(s) | 502, 1017, 1608, 2442 |
| TaaI | ACNGT | 4 cut(s) | 450, 817, 1330, 2513 |
| TaiI | ACGT | 6 cut(s) | 274, 324, 1049, 2708, 2824, 2908 |
| TatI | WGTACW | 2 cut(s) | 255, 1289 |
| TauI | GCSGC | 2 cut(s) | 869, 2865 |
| TfiI | GAWTC | 8 cut(s) | 182, 1583, 1846, 1899, 1996, 2309, 2732, 2848 |
| TscAI | CASTG | 7 cut(s) | 850, 963, 1636, 1948, 2382, 2530, 2677 |
| TseFI | GTSAC | 4 cut(s) | 1819, 2377, 2527, 2892 |
| Tsp45I | GTSAC | 4 cut(s) | 1819, 2377, 2527, 2892 |
| TspDTI | ATGAA | 7 cut(s) | 720, 1746, 1800, 2264, 2616, 2764, 2840 |
| TspGWI | ACGGA | 4 cut(s) | 1138, 1775, 2306, 2744 |
| TspRI | CASTG | 7 cut(s) | 850, 963, 1636, 1948, 2382, 2530, 2677 |
| Vha464I | CTTAAG | 2 cut(s) | 785, 1063 |
| VpaK11BI | GGWCC | 3 cut(s) | 115, 210, 2367 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 1319, 2661 |
| XapI | RAATTY | 6 cut(s) | 1093, 1159, 1516, 1745, 1772, 2014 |
| XceI | RCATGY | 3 cut(s) | 529, 858, 1226 |
| XhoI | CTCGAG | 1 cut(s) | 681 |
| XmiI | GTMKAC | 1 cut(s) | 1509 |
| XmnI | GAANNNNTTC | 5 cut(s) | 774, 1373, 2064, 2619, 2731 |
| XspI | CTAG | 6 cut(s) | 1490, 1685, 1802, 1961, 2814, 2838 |
| ZraI | GACGTC | 1 cut(s) | 1047 |