Rw4G001880

U-box domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
OG0011550
Physical Location & Seq
Reverse (-)
3430169 .. 3433583
3415 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G001880.1

Sequence Viewer

Length: 2253 bp
ATGGCTTTGGAGCTTATACCTATTGGGACTATCCTGGCTGTGTTAACTAACCAGGTCATTAAAACAGCTCAAGCTGCAAAGGATGTTTTTGATAAAGAGAGTTTCAGAGTCCTCTCAAAGCACTTGTTTGACATTGAACTGGTCTTAAAGGAATTACAGCGTCAAGAACTAAATGATTCTCAAGCTGCAAGGCTTGCTGTGGAGTTCCTAGAAAGAGATGTGAAAAAGGCCAGTAATCTTGTTGAGAAGTACAAAAACCGAGCTCGATTCTACTCGATTGTCAGGTGCCGACACATTGTCAAGGAGGTACAAGAAGTTACAAGAGACATTGGAAAGTCTTTGGCTGCTCTATCTCTAGCAAATACTGAAGTGTTATCAGGGATATCTGATCAGGTGAATAAGCTACAGAACGAGATGCAAAGGGTAGAATTTGAGGCTTCGCAGTCTCAGATTCAAATTTTTGACAGGTTAAATCGGGGTCTTCAAGACCAGAACCATGACCAGGGTTTTGCAAATGACATGCTCGAAGAAATAGCAATGGAAGTTGGGGTGCCTTTAGAGCCCTCAAAGATAAGCAAAGAGCTTGCAGATATCAGAAAGGAGAAAGAAGAAGCTGCTGACAGGAAAGAAAGAGCTGAAGCTTTTTTCTTGGGACAGGTTATTGAGCTGCTTTCTCGAGCTGATGCTGCAAGGGATTATGAAGAAGTCAAGAAGACATACAACCAACGTGTTCAGGCCATAGAGAGATATGACACAAGTGAAGAATACATTCCACCACTTAAAGCTTTTATTTGCTGTTTGAAAGGAACTGTGATGGTGGAACCGGTCAGCCTTTGCACTGGTACTACATGCGAGAGAGCTGCCATCATAGCTTGGTTTGAGAGTGGGGAGAGAACCGACCCAGAAACTAGAGAGGTGCTTATAGAAACTTCCTGGAGAGGCCTTAACCAAATGCAAGATCTTATGGGAGAGAATTCTATTAACAAGGACTGGATGGCTATTGAAGGGCTCACTGATATTATAATCTCTATCCTTGGGACCTCTCACAACAGAGATGTGAAGCACAAGATTTTGATCACCTTAAAGGATATTGTAGAAGGCCATGCCAGAAATAAGCCGGATAGTGATTCTCCTCCAATAATTAGTAGAACCATTTTCAATGTGAAGTTGCTAGGAACTCTTCTTTTGGAAGTCCTTGTAGAATTTCATGTGTATAACTCTTTTGATAAAGATTTCATCATGGAACAAGATGCTGAAGAAGAAGTGGTTGAGTCCCCAGGTTGGGATCGCATCATTGGCTGCTTAGGGCGGGACTCAAGCATCTCAAAGGCTGCAATCAAATTACTTTATGAATTGCTGCAAGACAGATCTGGTTGGAATGTGTCTGTATGTAAGAAACTCTCTCAACAACGCAGCACAATTATTTTCCTTGTTACCCTCTTAAAGGGTACTGTGAAGGAGTCAGCTGAGATTGCAGAAATAATCTTGATGAAGCTTTTCGACATAGATGAGGAGAACATTTCTCGTGCAGCTAAATCTGGCTGGTATAAGCCACTTATTGATCGTATAGTTCAAGGGCCAGAAAATTCAAGGATAGCAATGGTCAGAATACTTGTTAACATGGAATTGGTCAACTCCAATTTGAAGCTCCTCGCTGAGGAGGGAGTCATACCTCCTTTGCTTGAAATGTTATCTGGAAGTATTGAGTCTAAACAATCGTCTTTATCTGCTTTGGTTCAATTGTCAAGTTGCCGTGCCAACAAAGAGCTGATTGCTGCTTCTGGTGGAGTTAATCTCGTTCTGAAACTAATTTTCTCTAATGTGCGCTCAATTATTGTTACTAAATGCTATGAAATGCTGGAGAAGTTCACTTCTGATATGATGGGAGCTAAATTCTTTAATCCCAACTTGTCTTGCAATGTCCGAAGGCCTGCCTTGCAGACACTTCATGGAATCTGCAAGTTTGATGCTAGGTTGGTTAAAAAAGCGGTTCTCACTGCCAATGCTGTATTTCTGGTCCTTCCTCTTCTTGATAATACTGAATCAGCGATTCGGGAGATTGCGATAAATTTACTTTTCCTCTTCTCCCATCATGAGCCTGAGGGAGTAGTAGAATACCTTCTTAAGCCAAGAAGGCTGGAGGCTTTAGTGGGGTTTCTCGAGAGTGATGATAAGGGTGATGTACAGATGGCTGCTGCTGGCTTATTGGCTAACCTCCATATCAGAACGATCACTAACTATGAAGTTAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
U-box

Protein Analysis

750

Amino Acids

84.44

Weight (kDa)

5.42

Isoelectric Point (pI)

39.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
U-box PF04564 263 - 309 3.7e-07 U-box domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1022
AccB1I GGYRCC 2 cut(s) 285, 550
AciI CCGC 2 cut(s) 1309, 1988
AclWI GGATC 1 cut(s) 1293
AcsI RAATTY 7 cut(s) 428, 456, 973, 1202, 1585, 1892, 2068
AcuI CTGAAG 3 cut(s) 387, 657, 1275
AfaI GTAC 5 cut(s) 251, 309, 844, 1450, 2184
AfiI CCNNNNNNNGG 5 cut(s) 502, 1281, 1282, 1444, 1657
AflII CTTAAG 1 cut(s) 2123
AflIII ACRYGT 1 cut(s) 727
AgeI ACCGGT 1 cut(s) 823
AhdI GACNNNNNGTC 1 cut(s) 296
AjnI CCWGG 5 cut(s) 33, 51, 501, 932, 1276
Alw21I GWGCWC 1 cut(s) 265
Alw26I GTCTC 2 cut(s) 318, 450
AlwI GGATC 1 cut(s) 1293
Ama87I CYCGRG 2 cut(s) 675, 2159
AoxI GGCC 6 cut(s) 228, 735, 940, 1099, 1577, 1928
ApoI RAATTY 7 cut(s) 428, 456, 973, 1202, 1585, 1892, 2068
ArsI GACNNNNNNTTYG 2 cut(s) 491, 523
AsiGI ACCGGT 1 cut(s) 823
Asp700I GAANNNNTTC 3 cut(s) 768, 1496, 2118
AspLEI GCGC 1 cut(s) 1827
AspS9I GGNCC 3 cut(s) 1038, 1577, 2017
AsuHPI GGTGA 3 cut(s) 406, 1069, 2189
AvaI CYCGRG 2 cut(s) 675, 2159
AvaII GGWCC 2 cut(s) 1038, 2017
AxyI CCTNAGG 1 cut(s) 2100
BanI GGYRCC 2 cut(s) 285, 550
BanII GRGCYC 3 cut(s) 265, 564, 1011
BarI GAAGNNNNNNTAC 2 cut(s) 2103, 2135
BauI CACGAG 1 cut(s) 1524
BbsI GAAGAC 2 cut(s) 473, 719
Bbv12I GWGCWC 1 cut(s) 265
BbvCI CCTCAGC 1 cut(s) 1656
BccI CCATC 6 cut(s) 808, 872, 988, 1876, 2097, 2182
BceAI ACGGC 1 cut(s) 1737
BcgI CGANNNNNNTGC 2 cut(s) 842, 876
BciT130I CCWGG 5 cut(s) 35, 53, 503, 934, 1278
BclI TGATCA 2 cut(s) 388, 1074
BcoDI GTCTC 2 cut(s) 318, 450
BfaI CTAG 5 cut(s) 209, 356, 909, 1172, 1971
BfmI CTRYAG 1 cut(s) 404
BfrI CTTAAG 1 cut(s) 2123
BglI GCCNNNNNGGC 1 cut(s) 2134
BglII AGATCT 2 cut(s) 958, 1367
Bme1390I CCNGG 5 cut(s) 35, 53, 503, 934, 1278
Bme18I GGWCC 2 cut(s) 1038, 2017
BmeRI GACNNNNNGTC 1 cut(s) 296
BmeT110I CYCGRG 2 cut(s) 675, 2159
BmgT120I GGNCC 3 cut(s) 1038, 1577, 2017
BmiI GGNNCC 4 cut(s) 287, 552, 822, 1039
BmrFI CCNGG 5 cut(s) 35, 53, 503, 934, 1278
BmsI GCATC 6 cut(s) 405, 673, 1240, 1299, 1329, 1957
BpiI GAAGAC 2 cut(s) 473, 719
BplI GAGNNNNNCTC 2 cut(s) 1779, 1811
BpmI CTGGAG 3 cut(s) 955, 1880, 2159
Bpu10I CCTNAGC 2 cut(s) 1303, 1656
BpuEI CTTGAG 3 cut(s) 54, 165, 1300
BsaBI GATNNNNATC 1 cut(s) 1073
BsaJI CCNNGG 3 cut(s) 502, 1033, 1276
BsaWI WCCGGW 1 cut(s) 823
Bsc4I CCNNNNNNNGG 5 cut(s) 502, 1281, 1282, 1444, 1657
Bse118I RCCGGY 1 cut(s) 823
Bse1I ACTGG 4 cut(s) 144, 231, 844, 995
Bse21I CCTNAGG 1 cut(s) 2100
Bse3DI GCAATG 3 cut(s) 543, 1605, 1924
Bse8I GATNNNNATC 1 cut(s) 1073
BseBI CCWGG 5 cut(s) 35, 53, 503, 934, 1278
BseDI CCNNGG 3 cut(s) 502, 1033, 1276
BseGI GGATG 2 cut(s) 88, 999
BseJI GATNNNNATC 1 cut(s) 1073
BseLI CCNNNNNNNGG 5 cut(s) 502, 1281, 1282, 1444, 1657
BseMI GCAATG 3 cut(s) 543, 1605, 1924
BseMII CTCAG 4 cut(s) 461, 1458, 1647, 2091
BseNI ACTGG 4 cut(s) 144, 231, 844, 995
BseRI GAGGAG 4 cut(s) 1122, 1526, 1640, 1673
BsgI GTGCAG 1 cut(s) 1548
BshFI GGCC 6 cut(s) 230, 737, 942, 1101, 1579, 1930
BshNI GGYRCC 2 cut(s) 285, 550
BshTI ACCGGT 1 cut(s) 823
BsiHKAI GWGCWC 1 cut(s) 265
BsiHKCI CYCGRG 2 cut(s) 675, 2159
BsiSI CCGG 2 cut(s) 824, 1118
BslFI GGGAC 5 cut(s) 40, 666, 1051, 1258, 1325
BslI CCNNNNNNNGG 5 cut(s) 502, 1281, 1282, 1444, 1657
BsmAI GTCTC 2 cut(s) 318, 450
BsmFI GGGAC 5 cut(s) 40, 666, 1051, 1258, 1325
BsnI GGCC 6 cut(s) 230, 737, 942, 1101, 1579, 1930
BsoBI CYCGRG 2 cut(s) 675, 2159
Bsp1286I GDGCHC 3 cut(s) 265, 564, 1011
Bsp1407I TGTACA 1 cut(s) 2182
Bsp143I GATC 7 cut(s) 388, 958, 1074, 1285, 1367, 1561, 2229
BspACI CCGC 2 cut(s) 1309, 1988
BspANI GGCC 6 cut(s) 230, 737, 942, 1101, 1579, 1930
BspCNI CTCAG 4 cut(s) 460, 1459, 1648, 2092
BspHI TCATGA 1 cut(s) 2092
BspLI GGNNCC 4 cut(s) 287, 552, 822, 1039
BspPI GGATC 1 cut(s) 1293
BspT107I GGYRCC 2 cut(s) 285, 550
BspTI CTTAAG 1 cut(s) 2123
BsrDI GCAATG 3 cut(s) 543, 1605, 1924
BsrFI RCCGGY 1 cut(s) 823
BsrGI TGTACA 1 cut(s) 2182
BsrI ACTGG 4 cut(s) 144, 231, 844, 995
BssAI RCCGGY 1 cut(s) 823
BssECI CCNNGG 3 cut(s) 502, 1033, 1276
BssMI GATC 7 cut(s) 388, 958, 1074, 1285, 1367, 1561, 2229
BssSI CACGAG 1 cut(s) 1524
BssT1I CCWWGG 1 cut(s) 1033
Bst2BI CACGAG 1 cut(s) 1524
Bst2UI CCWGG 5 cut(s) 35, 53, 503, 934, 1278
Bst4CI ACNGT 2 cut(s) 811, 1453
Bst6I CTCTTC 3 cut(s) 1185, 2031, 2087
BstAFI CTTAAG 1 cut(s) 2123
BstAPI GCANNNNNTGC 1 cut(s) 194
BstAUI TGTACA 1 cut(s) 2182
BstC8I GCNNGC 4 cut(s) 195, 585, 1932, 2200
BstDEI CTNAG 5 cut(s) 447, 1303, 1467, 1656, 2100
BstENI CCTNNNNNAGG 2 cut(s) 1442, 1655
BstF5I GGATG 2 cut(s) 88, 999
BstHHI GCGC 1 cut(s) 1827
BstKTI GATC 7 cut(s) 391, 961, 1077, 1288, 1370, 1564, 2232
BstMAI GTCTC 2 cut(s) 318, 450
BstMBI GATC 7 cut(s) 388, 958, 1074, 1285, 1367, 1561, 2229
BstMWI GCNNNNNNNGC 9 cut(s) 74, 194, 559, 686, 869, 1296, 1472, 1936, 2134
BstNI CCWGG 5 cut(s) 35, 53, 503, 934, 1278
BstNSI RCATGY 2 cut(s) 523, 852
BstSCI CCNGG 5 cut(s) 33, 51, 501, 932, 1276
BstSFI CTRYAG 1 cut(s) 404
BstV2I GAAGAC 2 cut(s) 473, 719
BstX2I RGATCY 2 cut(s) 958, 1367
BstYI RGATCY 2 cut(s) 958, 1367
Bsu36I CCTNAGG 1 cut(s) 2100
BsuRI GGCC 6 cut(s) 230, 737, 942, 1101, 1579, 1930
BtsCI GGATG 2 cut(s) 88, 999
BtsI GCAGTG 1 cut(s) 1995
BtsIMutI CAGTG 3 cut(s) 837, 1011, 1995
Cac8I GCNNGC 4 cut(s) 195, 585, 1932, 2200
CciI TCATGA 1 cut(s) 2092
CfoI GCGC 1 cut(s) 1827
Cfr10I RCCGGY 1 cut(s) 823
Cfr13I GGNCC 3 cut(s) 1038, 1577, 2017
CseI GACGC 1 cut(s) 149
CsiI ACCWGGT 1 cut(s) 51
Csp6I GTAC 5 cut(s) 250, 308, 843, 1449, 2183
CspAI ACCGGT 1 cut(s) 823
CviAII CATG 9 cut(s) 497, 520, 849, 1103, 1208, 1240, 1621, 1949, 2093
CviQI GTAC 5 cut(s) 250, 308, 843, 1449, 2183
DdeI CTNAG 5 cut(s) 447, 1303, 1467, 1656, 2100
DpnI GATC 7 cut(s) 390, 960, 1076, 1287, 1369, 1563, 2231
DpnII GATC 7 cut(s) 388, 958, 1074, 1285, 1367, 1561, 2229
DriI GACNNNNNGTC 1 cut(s) 296
Eam1104I CTCTTC 3 cut(s) 1185, 2031, 2087
Eam1105I GACNNNNNGTC 1 cut(s) 296
EarI CTCTTC 3 cut(s) 1185, 2031, 2087
Ecl136II GAGCTC 1 cut(s) 263
Eco130I CCWWGG 1 cut(s) 1033
Eco147I AGGCCT 2 cut(s) 942, 1930
Eco24I GRGCYC 3 cut(s) 265, 564, 1011
Eco32I GATATC 2 cut(s) 384, 592
Eco47I GGWCC 2 cut(s) 1038, 2017
Eco53kI GAGCTC 1 cut(s) 263
Eco57I CTGAAG 3 cut(s) 387, 657, 1275
Eco81I CCTNAGG 1 cut(s) 2100
Eco88I CYCGRG 2 cut(s) 675, 2159
EcoICRI GAGCTC 1 cut(s) 263
EcoNI CCTNNNNNAGG 2 cut(s) 1442, 1655
EcoO109I RGGNCCY 1 cut(s) 1038
EcoRI GAATTC 1 cut(s) 973
EcoRII CCWGG 5 cut(s) 33, 51, 501, 932, 1276
EcoRV GATATC 2 cut(s) 384, 592
EcoT14I CCWWGG 1 cut(s) 1033
EcoT38I GRGCYC 3 cut(s) 265, 564, 1011
ErhI CCWWGG 1 cut(s) 1033
FaeI CATG 9 cut(s) 500, 523, 852, 1106, 1211, 1243, 1624, 1952, 2096
FaqI GGGAC 5 cut(s) 40, 666, 1051, 1258, 1325
FatI CATG 9 cut(s) 496, 519, 848, 1102, 1207, 1239, 1620, 1948, 2092
FauI CCCGC 1 cut(s) 1302
FbaI TGATCA 2 cut(s) 388, 1074
FokI GGATG 2 cut(s) 95, 1006
FriOI GRGCYC 3 cut(s) 265, 564, 1011
FspBI CTAG 5 cut(s) 209, 356, 909, 1172, 1971
GlaI GCGC 1 cut(s) 1826
GsuI CTGGAG 3 cut(s) 955, 1880, 2159
HaeIII GGCC 6 cut(s) 230, 737, 942, 1101, 1579, 1930
HapII CCGG 2 cut(s) 824, 1118
HgaI GACGC 1 cut(s) 149
HhaI GCGC 1 cut(s) 1827
Hin1II CATG 9 cut(s) 500, 523, 852, 1106, 1211, 1243, 1624, 1952, 2096
Hin6I GCGC 1 cut(s) 1825
HinP1I GCGC 1 cut(s) 1825
HincII GTYRAC 3 cut(s) 45, 1618, 1633
HindII GTYRAC 3 cut(s) 45, 1618, 1633
HindIII AAGCTT 3 cut(s) 639, 783, 1493
HpaI GTTAAC 2 cut(s) 45, 1618
HpaII CCGG 2 cut(s) 824, 1118
HphI GGTGA 3 cut(s) 406, 1069, 2189
Hpy166II GTNNAC 4 cut(s) 45, 1618, 1633, 1869
Hpy188I TCNGA 9 cut(s) 107, 388, 450, 596, 1607, 1803, 1876, 1925, 2225
Hpy8I GTNNAC 4 cut(s) 45, 1618, 1633, 1869
HpyAV CCTTC 7 cut(s) 998, 1091, 1450, 1920, 2030, 2127, 2129
HpyCH4III ACNGT 2 cut(s) 811, 1453
HpyCH4IV ACGT 1 cut(s) 727
HpyF10VI GCNNNNNNNGC 9 cut(s) 74, 194, 559, 686, 869, 1296, 1472, 1936, 2134
HpyF3I CTNAG 5 cut(s) 447, 1303, 1467, 1656, 2100
HpySE526I ACGT 1 cut(s) 727
Hsp92II CATG 9 cut(s) 500, 523, 852, 1106, 1211, 1243, 1624, 1952, 2096
HspAI GCGC 1 cut(s) 1825
Ksp22I TGATCA 2 cut(s) 388, 1074
KspAI GTTAAC 2 cut(s) 45, 1618
Kzo9I GATC 7 cut(s) 388, 958, 1074, 1285, 1367, 1561, 2229
LmnI GCTCC 3 cut(s) 10, 1653, 1886
LweI GCATC 6 cut(s) 405, 673, 1240, 1299, 1329, 1957
MabI ACCWGGT 1 cut(s) 51
MaeI CTAG 5 cut(s) 209, 356, 909, 1172, 1971
MaeII ACGT 1 cut(s) 727
MaeIII GTNAC 3 cut(s) 316, 1432, 1837
MalI GATC 7 cut(s) 390, 960, 1076, 1287, 1369, 1563, 2231
MboI GATC 7 cut(s) 388, 958, 1074, 1285, 1367, 1561, 2229
MfeI CAATTG 1 cut(s) 1739
MflI RGATCY 2 cut(s) 958, 1367
MhlI GDGCHC 3 cut(s) 265, 564, 1011
MlyI GAGTC 6 cut(s) 117, 1280, 1307, 1469, 1674, 1715
MmeI TCCRAC 1 cut(s) 1355
MroXI GAANNNNTTC 3 cut(s) 768, 1496, 2118
MspA1I CMGCKG 1 cut(s) 1466
MspCI CTTAAG 1 cut(s) 2123
MspI CCGG 2 cut(s) 824, 1118
MspR9I CCNGG 5 cut(s) 35, 53, 503, 934, 1278
MunI CAATTG 1 cut(s) 1739
MvaI CCWGG 5 cut(s) 35, 53, 503, 934, 1278
MwoI GCNNNNNNNGC 9 cut(s) 74, 194, 559, 686, 869, 1296, 1472, 1936, 2134
NdeII GATC 7 cut(s) 388, 958, 1074, 1285, 1367, 1561, 2229
NlaIII CATG 9 cut(s) 500, 523, 852, 1106, 1211, 1243, 1624, 1952, 2096
NlaIV GGNNCC 4 cut(s) 287, 552, 822, 1039
NspI RCATGY 2 cut(s) 523, 852
PaeR7I CTCGAG 2 cut(s) 675, 2159
PagI TCATGA 1 cut(s) 2092
PceI AGGCCT 2 cut(s) 942, 1930
PdmI GAANNNNTTC 3 cut(s) 768, 1496, 2118
PfeI GAWTC 7 cut(s) 176, 267, 451, 1127, 1953, 2042, 2050
PfoI TCCNGGA 1 cut(s) 932
PinAI ACCGGT 1 cut(s) 823
PleI GAGTC 6 cut(s) 116, 1279, 1307, 1468, 1673, 1714
PpsI GAGTC 6 cut(s) 116, 1279, 1307, 1468, 1673, 1714
PpuMI RGGWCCY 1 cut(s) 1038
PsiI TTATAA 1 cut(s) 1022
Psp124BI GAGCTC 1 cut(s) 265
Psp5II RGGWCCY 1 cut(s) 1038
Psp6I CCWGG 5 cut(s) 33, 51, 501, 932, 1276
PspGI CCWGG 5 cut(s) 33, 51, 501, 932, 1276
PspN4I GGNNCC 4 cut(s) 287, 552, 822, 1039
PspPI GGNCC 3 cut(s) 1038, 1577, 2017
PspPPI RGGWCCY 1 cut(s) 1038
PsuI RGATCY 2 cut(s) 958, 1367
PvuII CAGCTG 1 cut(s) 1466
RsaI GTAC 5 cut(s) 251, 309, 844, 1450, 2184
RsaNI GTAC 5 cut(s) 250, 308, 843, 1449, 2183
SacI GAGCTC 1 cut(s) 265
Sau3AI GATC 7 cut(s) 388, 958, 1074, 1285, 1367, 1561, 2229
Sau96I GGNCC 3 cut(s) 1038, 1577, 2017
SchI GAGTC 6 cut(s) 117, 1280, 1307, 1469, 1674, 1715
ScrFI CCNGG 5 cut(s) 35, 53, 503, 934, 1278
SduI GDGCHC 3 cut(s) 265, 564, 1011
SexAI ACCWGGT 1 cut(s) 51
SfaNI GCATC 6 cut(s) 405, 673, 1240, 1299, 1329, 1957
SfcI CTRYAG 1 cut(s) 404
Sfr274I CTCGAG 2 cut(s) 675, 2159
SinI GGWCC 2 cut(s) 1038, 2017
SlaI CTCGAG 2 cut(s) 675, 2159
SmlI CTYRAG 6 cut(s) 69, 180, 675, 1315, 2123, 2159
SmoI CTYRAG 6 cut(s) 69, 180, 675, 1315, 2123, 2159
SseBI AGGCCT 2 cut(s) 942, 1930
SsiI CCGC 2 cut(s) 1309, 1988
SspMI CTAG 5 cut(s) 209, 356, 909, 1172, 1971
SstI GAGCTC 1 cut(s) 265
StuI AGGCCT 2 cut(s) 942, 1930
StyD4I CCNGG 5 cut(s) 33, 51, 501, 932, 1276
StyI CCWWGG 1 cut(s) 1033
TaaI ACNGT 2 cut(s) 811, 1453
TaiI ACGT 1 cut(s) 730
TaqI TCGA 6 cut(s) 265, 275, 525, 676, 1500, 2160
TatI WGTACW 2 cut(s) 249, 2182
TfiI GAWTC 7 cut(s) 176, 267, 451, 1127, 1953, 2042, 2050
TscAI CASTG 3 cut(s) 844, 1018, 2002
TspDTI ATGAA 7 cut(s) 714, 1196, 1225, 1365, 1505, 1866, 1937
TspRI CASTG 3 cut(s) 844, 1018, 2002
Vha464I CTTAAG 1 cut(s) 2123
VpaK11BI GGWCC 2 cut(s) 1038, 2017
XagI CCTNNNNNAGG 2 cut(s) 1442, 1655
XapI RAATTY 7 cut(s) 428, 456, 973, 1202, 1585, 1892, 2068
XceI RCATGY 2 cut(s) 523, 852
XhoI CTCGAG 2 cut(s) 675, 2159
XmnI GAANNNNTTC 3 cut(s) 768, 1496, 2118
XspI CTAG 5 cut(s) 209, 356, 909, 1172, 1971
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.