Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr13

Orthogroup ID

OG0011551

Physical Location & Seq

Genomic Coordinates Forward (+)

17070346 .. 17075441

Gene Structure 5096 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2262 bp

ATGGAGAATCGCAGCAAAAGAAAAAGAAAGCCGGAATCCGACGACATTAGCGACGACACCGCCTTCGCCGTCGTGCTGGCCGCTCTTTCATCTCTGAACCCCAATTCCCTCCGACCCTTAATCAATAAATGCCTAAACAAACTCCACCGCTCGATCACCGATCCCACACTCTCTCTTCTCCCAACTCTCCTCACTTTCAACTCTCCTGCAATATCTCGCCGTGCCGCTGAGATGGTGGGGTACGCCGCCCTGGAGTCCTTGGACATGAACCAGAGGATTGCTTCCGATGCTGACATAATCAATAGCTTGCTCTCCGCGTTGGCCAGCTCCAACACCGGCGTCTCAGTGGCTGCCTGCAATGCCCTTCTGGATTTGTGCACCACTGGTTTCGGACGGCGTCGTTTGCTCGATTCCTCTGCGCTTCCCAGGATTCTTGGAGGAGTTATCGCTCCTAAAATTGGGTTTAAGGGAGATGAACTTCCAGTGTTACTTCTTAGTGCTGCAGTTCTTCTCATCAATACCTGTAAAATTGAGGAATTGGAGAACATCCCAACAAACCTCTCTCATGTTTTTTTCGCCTTCATGAGAAATCTGTGGGTGAAAGTGCGGAATGAAATGGTGTTCGAAAGCCAATTAGAGTCCACCCAAGGGGGGCATTTACATATTAGCAACATTAGGATTAGTGATATAGCCGAAACCCTTTTTAGGCTTTCCATTTGTGCCTCTCAGCTTATCAAGCCTTTGCCTTTTCATGTGGTTGAAAGGGATATATTTGGATTCTCTGAGTCTGGTTTTAAGGATTTCGTATCAAATCAGTGGGAGGTGTCACCGTTTCTTGTGCGGCGTGGGCATCCAGAAGGGGATTTAGTTGAGGAGAATGATATTTTTGGACCATTTGTACGATCACTAAACTCAACAGGAACATTTCCTTCGTTTCTTTCTTCTATGCTTCTGAGGATGGTTTCTTGTCTTCCTATTGCTTCTGATGAATTTAACATCCTTACTTTCCTAGAGGAGGTGAAAAATAAATTGGGTTGCCTTCTAACCTACCAGCAGGACATTCGGGTTCTAAGAACAGACTGCCACCTTAAGAGGGAGGAACATTTTTTTCAGAACAGTTTGAACTCTTGTTGTACAAGGGATCCTCATTATCTTGGTGTTAAAGATGTTTTAAAATGCGAAGAAGCATACAAGGAAGGTTATACAGTTGCACTGCGTGGAATGGAGTTCCGCTTTGAGAGCGTTGCAGCTATTGCAGATGGATTGGCATCTCTTTTTGGTCAACCATCAATTGGTGCCAATATGTACTTGACACCACCTAATTCTCAGGGTTTGGCTCGCCACTACGATGACCATTGTGTGTTTGTATGCCAACTTGTTGGGACTAAGAAATGGAGACTGTATCCCCAGTCAAATGTGCATTTACCTCGCTTGTATGATCCTCTTAATCAGCTACATGCTTCAGAAGTGCAGAGTTCACCAGCTGAATGCAAACAATTTTTGCTGAGAGAAGGTGATATTTTGTATATTCCCAGAGGTGTTCTCCATGAGGCATGCACGGAGAATGTTAGTTTTGATGGGTCTGATGGCAATTCCTTACACCTTACACTCGGTATTGAGGTTGAGCCTCCTTTTGAGTGGGAGGGATTTGTTCATGTTGCACTCTTCAGTTGGAACCAGAACCAAAAAAAAGCTAATAACCCTTCCAAGTATTCATCTGGAATTATTCATGATATATCTGTGAATTTGTTGCATGCTGCTATTGTGCTGATTGACGATTCTGATTCTACCTTCCGGAAGGCTTGCTTGGTTGCTTCGGTTTTTTCACAATCGCATATCCATAATTGGCTTGATTTAAACCAGCGAATCATTTTCTGTCAGTTGATTGACAAAATTAAAATAGAGTCACAGTTCTTGAAAGTGTTCAGGAATGTAGAATTAGCAATTCAGAAAAGCGAAGATCCTTTCCAACGAATTAGATGGCTTGGGTTTCTTAATACGGAGGAAGAAAGCAGTCCAAATTGTGAACAGAATATGCATTTGATGGGGATGAAAAACTTGTTCACATTGTGCAGTCAACATAAAGGCAAGGTGGAAGCTGCATTCCAGCAGCTAACATCCAGGTTTAGTAGTGAGGTGATATTTGAGGATGCAATAGAAAGGATTCATTTGGCATGTTATCTGAGAACTGAAAAGCTGGAGACCTGTTATGAGGAAACAGAAGATGATGATACACAAAGATTTCATCATTTATACAGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005488 GO:0005506 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006325 GO:0006355 GO:0006464 GO:0006482 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008214 GO:0009507 GO:0009536 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016043 GO:0016491 GO:0016569 GO:0016570 GO:0016577 GO:0016705 GO:0016706 GO:0019219 GO:0019222 GO:0019538 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032451 GO:0032452 GO:0032453 GO:0034720 GO:0036211 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045892 GO:0045934 GO:0046872 GO:0046914 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0051171 GO:0051172 GO:0051213 GO:0051252 GO:0051253 GO:0051276 GO:0051864 GO:0055114 GO:0060255 GO:0065007 GO:0070076 GO:0070544 GO:0070988 GO:0071704 GO:0071840 GO:0080090 GO:0140096 GO:1901564 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cupin_4

Protein Analysis

754

Amino Acids

84.95

Weight (kDa)

5.75

Isoelectric Point (pI)

55.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
JmjC_2	PF08007	409 - 526	6.2e-22	JmjC domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0011551)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g06530 FvH4_4g06530 FvH4_4g06530 FvH4_4g06530 FvH4_4g06530
malus_domestica	MD13G1236300.v1.1
prunus_persica	Prupe.1G068100_v2.0.a1 Prupe.1G068100_v2.0.a1
pyrus_communis	pycom13g20910
rosa_chinensis	RchiOBHm_Chr4g0398451
rosa_laevigata	RLG00000009361
rosa_multiflora	Rmu_ssc0000240.1_g000034
rosa_roxburghii	Rroxscaffold_5G00343410
rosa_rugosa	Rorug04G0008000 Rorug04G0008100
rosa_samantha	Rh4AG086200 Rh4BG083100 Rh4CG094000 Rh4DG077900
rosa_wichuraiana	Rw4G007210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1295
AccB7I	CCANNNNNTGG	1 cut(s)	1292
AccBSI	CCGCTC	2 cut(s)	83, 150
AccII	CGCG	1 cut(s)	317
AccIII	TCCGGA	1 cut(s)	1794
AciI	CCGC	9 cut(s)	60, 81, 148, 225, 246, 315, 607, 841, 1231
AclWI	GGATC	5 cut(s)	155, 1136, 1149, 1433, 1955
AcoI	YGGCCR	2 cut(s)	78, 321
AcsI	RAATTY	2 cut(s)	989, 1744
AcuI	CTGAAG	2 cut(s)	1446, 1651
AcyI	GRCGYC	2 cut(s)	339, 397
AdeI	CACNNNGTG	2 cut(s)	1217, 2070
AfaI	GTAC	4 cut(s)	242, 900, 1135, 1307
AfiI	CCNNNNNNNGG	7 cut(s)	458, 648, 651, 705, 1015, 1093, 1292
AflII	CTTAAG	1 cut(s)	1088
AgsI	TTSAA	4 cut(s)	199, 761, 1123, 1918
AjnI	CCWGG	3 cut(s)	249, 425, 2120
AjuI	GAANNNNNNNTTGG	4 cut(s)	1013, 1045, 1790, 1822
AloI	GAACNNNNNNTCC	2 cut(s)	89, 121
Alw21I	GWGCWC	1 cut(s)	380
Alw26I	GTCTC	3 cut(s)	346, 1390, 2195
Alw44I	GTGCAC	1 cut(s)	376
AlwI	GGATC	5 cut(s)	155, 1136, 1149, 1433, 1955
AlwNI	CAGNNNCTG	1 cut(s)	350
Aor13HI	TCCGGA	1 cut(s)	1794
AoxI	GGCC	2 cut(s)	78, 321
ApaLI	GTGCAC	1 cut(s)	376
ApeKI	GCWGC	7 cut(s)	12, 350, 500, 1247, 1757, 2099, 2110
ApoI	RAATTY	2 cut(s)	989, 1744
ArsI	GACNNNNNNTTYG	2 cut(s)	47, 79
Asp700I	GAANNNNTTC	2 cut(s)	1922, 2163
AspLEI	GCGC	1 cut(s)	421
AspS9I	GGNCC	1 cut(s)	890
AsuHPI	GGTGA	7 cut(s)	148, 610, 819, 1030, 1470, 1526, 2149
AsuII	TTCGAA	1 cut(s)	624
AvaII	GGWCC	1 cut(s)	890
BaeGI	GKGCMC	1 cut(s)	380
BalI	TGGCCA	1 cut(s)	323
BamHI	GGATCC	1 cut(s)	1141
BanI	GGYRCC	1 cut(s)	1295
BbsI	GAAGAC	1 cut(s)	962
Bbv12I	GWGCWC	1 cut(s)	380
BbvI	GCAGC	7 cut(s)	24, 337, 487, 1259, 1744, 2086, 2122
BccI	CCATC	8 cut(s)	226, 952, 1253, 1294, 1571, 1580, 1974, 2038
BceAI	ACGGC	3 cut(s)	53, 204, 410
BcgI	CGANNNNNNTGC	6 cut(s)	398, 432, 1043, 1077, 1409, 1443
BciT130I	CCWGG	3 cut(s)	251, 427, 2122
BciVI	GTATCC	1 cut(s)	1413
BcoDI	GTCTC	3 cut(s)	346, 1390, 2195
BfaI	CTAG	1 cut(s)	1010
BfmI	CTRYAG	1 cut(s)	501
BfrI	CTTAAG	1 cut(s)	1088
BfuI	GTATCC	1 cut(s)	1413
Bme1390I	CCNGG	3 cut(s)	251, 427, 2122
Bme18I	GGWCC	1 cut(s)	890
BmgT120I	GGNCC	1 cut(s)	890
BmiI	GGNNCC	3 cut(s)	1143, 1297, 1676
BmrFI	CCNGG	3 cut(s)	251, 427, 2122
BmrI	ACTGGG	1 cut(s)	1402
BmsI	GCATC	4 cut(s)	277, 859, 1277, 2140
BmuI	ACTGGG	1 cut(s)	1402
BpiI	GAAGAC	1 cut(s)	962
BplI	GAGNNNNNCTC	2 cut(s)	1527, 1559
BpmI	CTGGAG	2 cut(s)	272, 2219
Bpu14I	TTCGAA	1 cut(s)	624
BsaBI	GATNNNNATC	1 cut(s)	1267
BsaHI	GRCGYC	2 cut(s)	339, 397
BsaI	GGTCTC	1 cut(s)	2195
BsaJI	CCNNGG	4 cut(s)	249, 258, 425, 646
BsaWI	WCCGGW	1 cut(s)	1794
Bsc4I	CCNNNNNNNGG	7 cut(s)	458, 648, 651, 705, 1015, 1093, 1292
Bse118I	RCCGGY	1 cut(s)	335
Bse1I	ACTGG	3 cut(s)	388, 482, 1408
Bse3DI	GCAATG	1 cut(s)	364
Bse8I	GATNNNNATC	1 cut(s)	1267
BseAI	TCCGGA	1 cut(s)	1794
BseBI	CCWGG	3 cut(s)	251, 427, 2122
BseDI	CCNNGG	4 cut(s)	249, 258, 425, 646
BseGI	GGATG	7 cut(s)	546, 850, 963, 996, 2055, 2117, 2155
BseJI	GATNNNNATC	1 cut(s)	1267
BseLI	CCNNNNNNNGG	7 cut(s)	458, 648, 651, 705, 1015, 1093, 1292
BseMI	GCAATG	1 cut(s)	364
BseMII	CTCAG	8 cut(s)	219, 357, 740, 774, 944, 1340, 1496, 2174
BseNI	ACTGG	3 cut(s)	388, 482, 1408
BseRI	GAGGAG	4 cut(s)	179, 453, 887, 1028
BseSI	GKGCMC	1 cut(s)	380
BseXI	GCAGC	7 cut(s)	24, 337, 487, 1259, 1744, 2086, 2122
BsgI	GTGCAG	2 cut(s)	1490, 2092
Bsh1236I	CGCG	1 cut(s)	317
BshFI	GGCC	2 cut(s)	80, 323
BshNI	GGYRCC	1 cut(s)	1295
BsiHKAI	GWGCWC	1 cut(s)	380
BsiSI	CCGG	3 cut(s)	32, 336, 1795
BslFI	GGGAC	1 cut(s)	1396
BslI	CCNNNNNNNGG	7 cut(s)	458, 648, 651, 705, 1015, 1093, 1292
BsmAI	GTCTC	3 cut(s)	346, 1390, 2195
BsmBI	CGTCTC	1 cut(s)	346
BsmFI	GGGAC	1 cut(s)	1396
BsmI	GAATGC	2 cut(s)	1493, 2102
BsnI	GGCC	2 cut(s)	80, 323
Bso31I	GGTCTC	1 cut(s)	2195
Bsp119I	TTCGAA	1 cut(s)	624
Bsp1286I	GDGCHC	1 cut(s)	380
Bsp13I	TCCGGA	1 cut(s)	1794
Bsp1407I	TGTACA	1 cut(s)	1133
Bsp143I	GATC	6 cut(s)	153, 160, 902, 1141, 1438, 1960
BspACI	CCGC	9 cut(s)	60, 81, 148, 225, 246, 315, 607, 841, 1231
BspANI	GGCC	2 cut(s)	80, 323
BspCNI	CTCAG	8 cut(s)	220, 356, 739, 775, 945, 1339, 1497, 2175
BspEI	TCCGGA	1 cut(s)	1794
BspFNI	CGCG	1 cut(s)	317
BspHI	TCATGA	2 cut(s)	582, 1729
BspLI	GGNNCC	3 cut(s)	1143, 1297, 1676
BspMAI	CTGCAG	1 cut(s)	505
BspPI	GGATC	5 cut(s)	155, 1136, 1149, 1433, 1955
BspT104I	TTCGAA	1 cut(s)	624
BspT107I	GGYRCC	1 cut(s)	1295
BspTI	CTTAAG	1 cut(s)	1088
BspTNI	GGTCTC	1 cut(s)	2195
BsrBI	CCGCTC	2 cut(s)	83, 150
BsrDI	GCAATG	1 cut(s)	364
BsrFI	RCCGGY	1 cut(s)	335
BsrGI	TGTACA	1 cut(s)	1133
BsrI	ACTGG	3 cut(s)	388, 482, 1408
BssAI	RCCGGY	1 cut(s)	335
BssECI	CCNNGG	4 cut(s)	249, 258, 425, 646
BssMI	GATC	6 cut(s)	153, 160, 902, 1141, 1438, 1960
BssNI	GRCGYC	2 cut(s)	339, 397
BssT1I	CCWWGG	2 cut(s)	258, 646
Bst2UI	CCWGG	3 cut(s)	251, 427, 2122
Bst4CI	ACNGT	5 cut(s)	831, 1118, 1207, 1401, 1911
Bst6I	CTCTTC	2 cut(s)	180, 1670
BstACI	GRCGYC	2 cut(s)	339, 397
BstAFI	CTTAAG	1 cut(s)	1088
BstAPI	GCANNNNNTGC	1 cut(s)	1253
BstAUI	TGTACA	1 cut(s)	1133
BstBI	TTCGAA	1 cut(s)	624
BstC8I	GCNNGC	8 cut(s)	78, 308, 325, 355, 1339, 1555, 1755, 1804
BstENI	CCTNNNNNAGG	1 cut(s)	1013
BstF5I	GGATG	7 cut(s)	546, 850, 963, 996, 2055, 2117, 2155
BstFNI	CGCG	1 cut(s)	317
BstHHI	GCGC	1 cut(s)	421
BstKTI	GATC	6 cut(s)	156, 163, 905, 1144, 1441, 1963
BstMAI	GTCTC	3 cut(s)	346, 1390, 2195
BstMBI	GATC	6 cut(s)	153, 160, 902, 1141, 1438, 1960
BstMWI	GCNNNNNNNGC	7 cut(s)	287, 359, 403, 736, 847, 1239, 1253
BstNI	CCWGG	3 cut(s)	251, 427, 2122
BstNSI	RCATGY	4 cut(s)	1460, 1557, 1757, 2178
BstSCI	CCNGG	3 cut(s)	249, 425, 2120
BstSFI	CTRYAG	1 cut(s)	501
BstSLI	GKGCMC	1 cut(s)	380
BstUI	CGCG	1 cut(s)	317
BstV1I	GCAGC	7 cut(s)	24, 337, 487, 1259, 1744, 2086, 2122
BstV2I	GAAGAC	1 cut(s)	962
BstX2I	RGATCY	2 cut(s)	1141, 1960
BstXI	CCANNNNNNTGG	1 cut(s)	1379
BstYI	RGATCY	2 cut(s)	1141, 1960
BsuI	GTATCC	1 cut(s)	1413
BsuRI	GGCC	2 cut(s)	80, 323
BtsCI	GGATG	7 cut(s)	546, 850, 963, 996, 2055, 2117, 2155
BtsI	GCAGTG	1 cut(s)	1211
BtsIMutI	CAGTG	5 cut(s)	351, 381, 489, 821, 1211
Cac8I	GCNNGC	8 cut(s)	78, 308, 325, 355, 1339, 1555, 1755, 1804
CaiI	CAGNNNCTG	1 cut(s)	350
CciI	TCATGA	2 cut(s)	582, 1729
CfoI	GCGC	1 cut(s)	421
Cfr10I	RCCGGY	1 cut(s)	335
Cfr13I	GGNCC	1 cut(s)	890
CseI	GACGC	2 cut(s)	328, 386
Csp6I	GTAC	4 cut(s)	241, 899, 1134, 1306
CviQI	GTAC	4 cut(s)	241, 899, 1134, 1306
DpnI	GATC	6 cut(s)	155, 162, 904, 1143, 1440, 1962
DpnII	GATC	6 cut(s)	153, 160, 902, 1141, 1438, 1960
DraI	TTTAAA	2 cut(s)	1173, 1857
DraIII	CACNNNGTG	2 cut(s)	1217, 2070
EaeI	YGGCCR	2 cut(s)	78, 321
Eam1104I	CTCTTC	2 cut(s)	180, 1670
EarI	CTCTTC	2 cut(s)	180, 1670
Eco130I	CCWWGG	2 cut(s)	258, 646
Eco31I	GGTCTC	1 cut(s)	2195
Eco47I	GGWCC	1 cut(s)	890
Eco57I	CTGAAG	2 cut(s)	1446, 1651
EcoNI	CCTNNNNNAGG	1 cut(s)	1013
EcoRII	CCWGG	3 cut(s)	249, 425, 2120
EcoT14I	CCWWGG	2 cut(s)	258, 646
EcoT22I	ATGCAT	1 cut(s)	2040
ErhI	CCWWGG	2 cut(s)	258, 646
Esp3I	CGTCTC	1 cut(s)	346
FalI	AAGNNNNNCTT	2 cut(s)	1790, 1822
FaqI	GGGAC	1 cut(s)	1396
FokI	GGATG	7 cut(s)	533, 837, 970, 983, 2062, 2104, 2162
FspBI	CTAG	1 cut(s)	1010
GlaI	GCGC	1 cut(s)	420
GsuI	CTGGAG	2 cut(s)	272, 2219
HaeIII	GGCC	2 cut(s)	80, 323
HapII	CCGG	3 cut(s)	32, 336, 1795
HgaI	GACGC	2 cut(s)	328, 386
HhaI	GCGC	1 cut(s)	421
Hin1I	GRCGYC	2 cut(s)	339, 397
Hin6I	GCGC	1 cut(s)	419
HinP1I	GCGC	1 cut(s)	419
HincII	GTYRAC	2 cut(s)	1283, 2078
HindII	GTYRAC	2 cut(s)	1283, 2078
HpaII	CCGG	3 cut(s)	32, 336, 1795
HphI	GGTGA	7 cut(s)	148, 610, 819, 1030, 1470, 1526, 2149
Hpy166II	GTNNAC	7 cut(s)	378, 642, 1283, 1478, 2027, 2064, 2078
Hpy188III	TCNNGA	8 cut(s)	368, 583, 854, 1719, 1730, 1795, 1915, 1927
Hpy8I	GTNNAC	7 cut(s)	378, 642, 1283, 1478, 2027, 2064, 2078
Hpy99I	CGWCG	4 cut(s)	44, 56, 74, 402
HpyCH4III	ACNGT	5 cut(s)	831, 1118, 1207, 1401, 1911
HpyF10VI	GCNNNNNNNGC	7 cut(s)	287, 359, 403, 736, 847, 1239, 1253
Hsp92I	GRCGYC	2 cut(s)	339, 397
HspAI	GCGC	1 cut(s)	419
Kpn2I	TCCGGA	1 cut(s)	1794
Kzo9I	GATC	6 cut(s)	153, 160, 902, 1141, 1438, 1960
LmnI	GCTCC	2 cut(s)	332, 454
Lsp1109I	GCAGC	7 cut(s)	24, 337, 487, 1259, 1744, 2086, 2122
LweI	GCATC	4 cut(s)	277, 859, 1277, 2140
MaeI	CTAG	1 cut(s)	1010
MaeIII	GTNAC	3 cut(s)	486, 825, 1905
MalI	GATC	6 cut(s)	155, 162, 904, 1143, 1440, 1962
MbiI	CCGCTC	2 cut(s)	83, 150
MboI	GATC	6 cut(s)	153, 160, 902, 1141, 1438, 1960
MboII	GAAGA	9 cut(s)	167, 500, 933, 962, 1193, 1657, 1970, 2018, 2234
MfeI	CAATTG	1 cut(s)	1290
MflI	RGATCY	2 cut(s)	1141, 1960
MhlI	GDGCHC	1 cut(s)	380
MlsI	TGGCCA	1 cut(s)	323
MluNI	TGGCCA	1 cut(s)	323
MlyI	GAGTC	4 cut(s)	263, 647, 794, 1913
MmeI	TCCRAC	5 cut(s)	63, 136, 354, 1652, 1993
Mox20I	TGGCCA	1 cut(s)	323
Mph1103I	ATGCAT	1 cut(s)	2040
MroI	TCCGGA	1 cut(s)	1794
MroXI	GAANNNNTTC	2 cut(s)	1922, 2163
MscI	TGGCCA	1 cut(s)	323
MslI	CAYNNNNRTG	1 cut(s)	1347
Msp20I	TGGCCA	1 cut(s)	323
MspA1I	CMGCKG	3 cut(s)	227, 1484, 2259
MspCI	CTTAAG	1 cut(s)	1088
MspI	CCGG	3 cut(s)	32, 336, 1795
MspR9I	CCNGG	3 cut(s)	251, 427, 2122
MunI	CAATTG	1 cut(s)	1290
Mva1269I	GAATGC	2 cut(s)	1493, 2102
MvaI	CCWGG	3 cut(s)	251, 427, 2122
MvnI	CGCG	1 cut(s)	317
MwoI	GCNNNNNNNGC	7 cut(s)	287, 359, 403, 736, 847, 1239, 1253
NdeII	GATC	6 cut(s)	153, 160, 902, 1141, 1438, 1960
NlaIV	GGNNCC	3 cut(s)	1143, 1297, 1676
NmuCI	GTSAC	2 cut(s)	825, 1905
NsiI	ATGCAT	1 cut(s)	2040
NspI	RCATGY	4 cut(s)	1460, 1557, 1757, 2178
NspV	TTCGAA	1 cut(s)	624
PaeI	GCATGC	2 cut(s)	1557, 1757
PagI	TCATGA	2 cut(s)	582, 1729
PcsI	WCGNNNNNNNCGW	1 cut(s)	48
PctI	GAATGC	2 cut(s)	1493, 2102
PdmI	GAANNNNTTC	2 cut(s)	1922, 2163
PfeI	GAWTC	9 cut(s)	7, 35, 410, 430, 777, 1778, 1784, 1866, 2164
PflFI	GACNNNGTC	1 cut(s)	396
PflMI	CCANNNNNTGG	1 cut(s)	1292
PleI	GAGTC	4 cut(s)	262, 646, 793, 1912
PpsI	GAGTC	4 cut(s)	262, 646, 793, 1912
Psp6I	CCWGG	3 cut(s)	249, 425, 2120
PspGI	CCWGG	3 cut(s)	249, 425, 2120
PspN4I	GGNNCC	3 cut(s)	1143, 1297, 1676
PspPI	GGNCC	1 cut(s)	890
PstI	CTGCAG	1 cut(s)	505
PstNI	CAGNNNCTG	1 cut(s)	350
PsuI	RGATCY	2 cut(s)	1141, 1960
PsyI	GACNNNGTC	1 cut(s)	396
PvuII	CAGCTG	2 cut(s)	1484, 2259
RsaI	GTAC	4 cut(s)	242, 900, 1135, 1307
RsaNI	GTAC	4 cut(s)	241, 899, 1134, 1306
RseI	CAYNNNNRTG	1 cut(s)	1347
Sau3AI	GATC	6 cut(s)	153, 160, 902, 1141, 1438, 1960
Sau96I	GGNCC	1 cut(s)	890
SchI	GAGTC	4 cut(s)	263, 647, 794, 1913
ScrFI	CCNGG	3 cut(s)	251, 427, 2122
SduI	GDGCHC	1 cut(s)	380
SfaNI	GCATC	4 cut(s)	277, 859, 1277, 2140
SfcI	CTRYAG	1 cut(s)	501
SfuI	TTCGAA	1 cut(s)	624
SgrAI	CRCCGGYG	1 cut(s)	335
SinI	GGWCC	1 cut(s)	890
SmiMI	CAYNNNNRTG	1 cut(s)	1347
SmlI	CTYRAG	1 cut(s)	1088
SmoI	CTYRAG	1 cut(s)	1088
SphI	GCATGC	2 cut(s)	1557, 1757
SsiI	CCGC	9 cut(s)	60, 81, 148, 225, 246, 315, 607, 841, 1231
SspMI	CTAG	1 cut(s)	1010
StyD4I	CCNGG	3 cut(s)	249, 425, 2120
StyI	CCWWGG	2 cut(s)	258, 646
TaaI	ACNGT	5 cut(s)	831, 1118, 1207, 1401, 1911
TaqI	TCGA	3 cut(s)	152, 408, 624
TatI	WGTACW	2 cut(s)	1133, 1305
TauI	GCSGC	4 cut(s)	83, 227, 248, 844
TfiI	GAWTC	9 cut(s)	7, 35, 410, 430, 777, 1778, 1784, 1866, 2164
TscAI	CASTG	5 cut(s)	351, 388, 489, 821, 1218
TseFI	GTSAC	2 cut(s)	825, 1905
TseI	GCWGC	7 cut(s)	12, 350, 500, 1247, 1757, 2099, 2110
Tsp45I	GTSAC	2 cut(s)	825, 1905
TspGWI	ACGGA	2 cut(s)	1574, 2015
TspRI	CASTG	5 cut(s)	351, 388, 489, 821, 1218
Tth111I	GACNNNGTC	1 cut(s)	396
Van91I	CCANNNNNTGG	1 cut(s)	1292
Vha464I	CTTAAG	1 cut(s)	1088
VneI	GTGCAC	1 cut(s)	376
VpaK11BI	GGWCC	1 cut(s)	890
XagI	CCTNNNNNAGG	1 cut(s)	1013
XapI	RAATTY	2 cut(s)	989, 1744
XceI	RCATGY	4 cut(s)	1460, 1557, 1757, 2178
XmnI	GAANNNNTTC	2 cut(s)	1922, 2163
XspI	CTAG	1 cut(s)	1010
Zsp2I	ATGCAT	1 cut(s)	2040

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.