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| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom01g03740 pycom01g03820 pycom01g03900 pycom05g01760 pycom10g28260 pycom13g23390 pycom13g24270 pycom13g26850 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1290 |
| AarI | CACCTGC | 1 cut(s) | 98 |
| Acc36I | ACCTGC | 1 cut(s) | 98 |
| AccB1I | GGYRCC | 2 cut(s) | 86, 199 |
| AccII | CGCG | 1 cut(s) | 1725 |
| AciI | CCGC | 3 cut(s) | 141, 763, 1723 |
| AclWI | GGATC | 1 cut(s) | 1726 |
| AcoI | YGGCCR | 1 cut(s) | 1686 |
| AcsI | RAATTY | 3 cut(s) | 833, 912, 962 |
| AcvI | CACGTG | 2 cut(s) | 507, 656 |
| AfaI | GTAC | 3 cut(s) | 413, 566, 1081 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 96 |
| AflIII | ACRYGT | 4 cut(s) | 408, 453, 944, 1117 |
| AgsI | TTSAA | 6 cut(s) | 707, 961, 1019, 1220, 1263, 1627 |
| AleI | CACNNNNGTG | 1 cut(s) | 132 |
| AluBI | AGCT | 5 cut(s) | 623, 663, 864, 1568, 1755 |
| AluI | AGCT | 5 cut(s) | 623, 663, 864, 1568, 1755 |
| Alw21I | GWGCWC | 1 cut(s) | 129 |
| AlwI | GGATC | 1 cut(s) | 1726 |
| AoxI | GGCC | 3 cut(s) | 79, 535, 1686 |
| ApeKI | GCWGC | 4 cut(s) | 66, 1380, 1583, 1598 |
| ApoI | RAATTY | 3 cut(s) | 833, 912, 962 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1213, 1245 |
| AseI | ATTAAT | 2 cut(s) | 360, 630 |
| AspS9I | GGNCC | 1 cut(s) | 536 |
| AsuHPI | GGTGA | 3 cut(s) | 1053, 1428, 1508 |
| AsuNHI | GCTAGC | 1 cut(s) | 659 |
| BaeGI | GKGCMC | 1 cut(s) | 577 |
| BanI | GGYRCC | 2 cut(s) | 86, 199 |
| BauI | CACGAG | 1 cut(s) | 1559 |
| BbrPI | CACGTG | 2 cut(s) | 507, 656 |
| Bbv12I | GWGCWC | 1 cut(s) | 129 |
| BbvI | GCAGC | 4 cut(s) | 78, 1392, 1570, 1585 |
| BccI | CCATC | 1 cut(s) | 353 |
| BceAI | ACGGC | 3 cut(s) | 100, 1673, 1701 |
| BclI | TGATCA | 1 cut(s) | 39 |
| BfaI | CTAG | 7 cut(s) | 660, 851, 1047, 1083, 1169, 1497, 1701 |
| BfmI | CTRYAG | 1 cut(s) | 115 |
| BfuAI | ACCTGC | 1 cut(s) | 98 |
| BisI | GCNGC | 4 cut(s) | 67, 1381, 1584, 1599 |
| BlpI | GCTNAGC | 1 cut(s) | 1654 |
| BlsI | GCNGC | 4 cut(s) | 68, 1382, 1585, 1600 |
| BmcAI | AGTACT | 1 cut(s) | 1081 |
| BmgT120I | GGNCC | 1 cut(s) | 536 |
| BmiI | GGNNCC | 5 cut(s) | 88, 160, 201, 538, 1668 |
| BmsI | GCATC | 6 cut(s) | 505, 507, 976, 1080, 1199, 1595 |
| BmtI | GCTAGC | 1 cut(s) | 663 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 91, 123, 853, 885 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1654 |
| BpuEI | CTTGAG | 1 cut(s) | 405 |
| BsaAI | YACGTR | 4 cut(s) | 290, 411, 507, 656 |
| BsaBI | GATNNNNATC | 1 cut(s) | 41 |
| BsaJI | CCNNGG | 3 cut(s) | 82, 154, 525 |
| BsaWI | WCCGGW | 1 cut(s) | 96 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 96 |
| Bse1I | ACTGG | 1 cut(s) | 33 |
| Bse8I | GATNNNNATC | 1 cut(s) | 41 |
| BseDI | CCNNGG | 3 cut(s) | 82, 154, 525 |
| BseGI | GGATG | 3 cut(s) | 1190, 1198, 1746 |
| BseJI | GATNNNNATC | 1 cut(s) | 41 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 96 |
| BseMII | CTCAG | 3 cut(s) | 206, 498, 1668 |
| BseNI | ACTGG | 1 cut(s) | 33 |
| BseSI | GKGCMC | 1 cut(s) | 577 |
| BseX3I | CGGCCG | 1 cut(s) | 1686 |
| BseXI | GCAGC | 4 cut(s) | 78, 1392, 1570, 1585 |
| Bsh1236I | CGCG | 1 cut(s) | 1725 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1689 |
| BshFI | GGCC | 3 cut(s) | 81, 537, 1688 |
| BshNI | GGYRCC | 2 cut(s) | 86, 199 |
| BsiEI | CGRYCG | 1 cut(s) | 1689 |
| BsiHKAI | GWGCWC | 1 cut(s) | 129 |
| BsiSI | CCGG | 1 cut(s) | 97 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 96 |
| BsmI | GAATGC | 1 cut(s) | 1345 |
| BsnI | GGCC | 3 cut(s) | 81, 537, 1688 |
| Bsp1286I | GDGCHC | 2 cut(s) | 129, 577 |
| Bsp143I | GATC | 2 cut(s) | 39, 1731 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1654 |
| Bsp19I | CCATGG | 1 cut(s) | 525 |
| BspACI | CCGC | 3 cut(s) | 141, 763, 1723 |
| BspANI | GGCC | 3 cut(s) | 81, 537, 1688 |
| BspCNI | CTCAG | 3 cut(s) | 205, 497, 1667 |
| BspFNI | CGCG | 1 cut(s) | 1725 |
| BspLI | GGNNCC | 5 cut(s) | 88, 160, 201, 538, 1668 |
| BspMAI | CTGCAG | 1 cut(s) | 119 |
| BspMI | ACCTGC | 1 cut(s) | 98 |
| BspOI | GCTAGC | 1 cut(s) | 663 |
| BspPI | GGATC | 1 cut(s) | 1726 |
| BspQI | GCTCTTC | 1 cut(s) | 302 |
| BspT107I | GGYRCC | 2 cut(s) | 86, 199 |
| BsrI | ACTGG | 1 cut(s) | 33 |
| BssECI | CCNNGG | 3 cut(s) | 82, 154, 525 |
| BssMI | GATC | 2 cut(s) | 39, 1731 |
| BssSI | CACGAG | 1 cut(s) | 1559 |
| BssT1I | CCWWGG | 1 cut(s) | 525 |
| Bst2BI | CACGAG | 1 cut(s) | 1559 |
| Bst4CI | ACNGT | 1 cut(s) | 131 |
| Bst6I | CTCTTC | 4 cut(s) | 216, 302, 602, 1329 |
| BstBAI | YACGTR | 4 cut(s) | 290, 411, 507, 656 |
| BstC8I | GCNNGC | 2 cut(s) | 661, 1139 |
| BstDEI | CTNAG | 7 cut(s) | 192, 484, 664, 1027, 1102, 1182, 1654 |
| BstDSI | CCRYGG | 3 cut(s) | 82, 154, 525 |
| BstF5I | GGATG | 3 cut(s) | 1190, 1198, 1746 |
| BstFNI | CGCG | 1 cut(s) | 1725 |
| BstKTI | GATC | 2 cut(s) | 42, 1734 |
| BstMBI | GATC | 2 cut(s) | 39, 1731 |
| BstMCI | CGRYCG | 1 cut(s) | 1689 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 66, 1628, 1761 |
| BstNSI | RCATGY | 5 cut(s) | 151, 948, 1042, 1121, 1177 |
| BstSFI | CTRYAG | 1 cut(s) | 115 |
| BstSLI | GKGCMC | 1 cut(s) | 577 |
| BstUI | CGCG | 1 cut(s) | 1725 |
| BstV1I | GCAGC | 4 cut(s) | 78, 1392, 1570, 1585 |
| BstZI | CGGCCG | 1 cut(s) | 1686 |
| BsuRI | GGCC | 3 cut(s) | 81, 537, 1688 |
| BtgI | CCRYGG | 3 cut(s) | 82, 154, 525 |
| BtsCI | GGATG | 3 cut(s) | 1190, 1198, 1746 |
| BtsIMutI | CAGTG | 2 cut(s) | 26, 577 |
| BveI | ACCTGC | 1 cut(s) | 98 |
| Cac8I | GCNNGC | 2 cut(s) | 661, 1139 |
| Cfr13I | GGNCC | 1 cut(s) | 536 |
| Csp6I | GTAC | 3 cut(s) | 412, 565, 1080 |
| CviQI | GTAC | 3 cut(s) | 412, 565, 1080 |
| DdeI | CTNAG | 7 cut(s) | 192, 484, 664, 1027, 1102, 1182, 1654 |
| DpnI | GATC | 2 cut(s) | 41, 1733 |
| DpnII | GATC | 2 cut(s) | 39, 1731 |
| EaeI | YGGCCR | 1 cut(s) | 1686 |
| EagI | CGGCCG | 1 cut(s) | 1686 |
| Eam1104I | CTCTTC | 4 cut(s) | 216, 302, 602, 1329 |
| EarI | CTCTTC | 4 cut(s) | 216, 302, 602, 1329 |
| EciI | GGCGGA | 1 cut(s) | 156 |
| EclXI | CGGCCG | 1 cut(s) | 1686 |
| Eco130I | CCWWGG | 1 cut(s) | 525 |
| Eco52I | CGGCCG | 1 cut(s) | 1686 |
| Eco72I | CACGTG | 2 cut(s) | 507, 656 |
| EcoRI | GAATTC | 1 cut(s) | 912 |
| EcoT14I | CCWWGG | 1 cut(s) | 525 |
| EcoT22I | ATGCAT | 1 cut(s) | 1192 |
| ErhI | CCWWGG | 1 cut(s) | 525 |
| FauI | CCCGC | 1 cut(s) | 770 |
| FauNDI | CATATG | 1 cut(s) | 742 |
| FbaI | TGATCA | 1 cut(s) | 39 |
| Fnu4HI | GCNGC | 4 cut(s) | 67, 1381, 1584, 1599 |
| FokI | GGATG | 3 cut(s) | 1177, 1185, 1733 |
| Fsp4HI | GCNGC | 4 cut(s) | 67, 1381, 1584, 1599 |
| FspBI | CTAG | 7 cut(s) | 660, 851, 1047, 1083, 1169, 1497, 1701 |
| GluI | GCNGC | 4 cut(s) | 67, 1381, 1584, 1599 |
| HaeIII | GGCC | 3 cut(s) | 81, 537, 1688 |
| HapII | CCGG | 1 cut(s) | 97 |
| HinfI | GANTC | 5 cut(s) | 167, 610, 1058, 1112, 1164 |
| HpaII | CCGG | 1 cut(s) | 97 |
| HphI | GGTGA | 3 cut(s) | 1053, 1428, 1508 |
| Hpy188I | TCNGA | 4 cut(s) | 366, 487, 586, 979 |
| Hpy188III | TCNNGA | 4 cut(s) | 614, 1047, 1127, 1701 |
| Hpy99I | CGWCG | 2 cut(s) | 74, 77 |
| HpyAV | CCTTC | 6 cut(s) | 71, 1366, 1375, 1379, 1419, 1477 |
| HpyCH4III | ACNGT | 1 cut(s) | 131 |
| HpyCH4IV | ACGT | 6 cut(s) | 289, 410, 453, 506, 567, 655 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 66, 1628, 1761 |
| HpyF3I | CTNAG | 7 cut(s) | 192, 484, 664, 1027, 1102, 1182, 1654 |
| HpySE526I | ACGT | 6 cut(s) | 289, 410, 453, 506, 567, 655 |
| Ksp22I | TGATCA | 1 cut(s) | 39 |
| Kzo9I | GATC | 2 cut(s) | 39, 1731 |
| LguI | GCTCTTC | 1 cut(s) | 302 |
| LpnPI | CCDG | 9 cut(s) | 14, 103, 110, 127, 416, 444, 590, 1123, 1473 |
| Lsp1109I | GCAGC | 4 cut(s) | 78, 1392, 1570, 1585 |
| LweI | GCATC | 6 cut(s) | 505, 507, 976, 1080, 1199, 1595 |
| MaeI | CTAG | 7 cut(s) | 660, 851, 1047, 1083, 1169, 1497, 1701 |
| MaeII | ACGT | 6 cut(s) | 289, 410, 453, 506, 567, 655 |
| MaeIII | GTNAC | 6 cut(s) | 172, 285, 502, 667, 1059, 1642 |
| MalI | GATC | 2 cut(s) | 41, 1733 |
| MboI | GATC | 2 cut(s) | 39, 1731 |
| MfeI | CAATTG | 1 cut(s) | 732 |
| MhlI | GDGCHC | 2 cut(s) | 129, 577 |
| MlyI | GAGTC | 2 cut(s) | 161, 1067 |
| MnlI | CCTC | 8 cut(s) | 44, 117, 137, 201, 350, 493, 1363, 1669 |
| Mph1103I | ATGCAT | 1 cut(s) | 1192 |
| MseI | TTAA | 8 cut(s) | 360, 630, 696, 789, 1023, 1122, 1680, 1715 |
| MslI | CAYNNNNRTG | 1 cut(s) | 132 |
| MspA1I | CMGCKG | 1 cut(s) | 1568 |
| MspI | CCGG | 1 cut(s) | 97 |
| MunI | CAATTG | 1 cut(s) | 732 |
| Mva1269I | GAATGC | 1 cut(s) | 1345 |
| MvnI | CGCG | 1 cut(s) | 1725 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 66, 1628, 1761 |
| NcoI | CCATGG | 1 cut(s) | 525 |
| NdeI | CATATG | 1 cut(s) | 742 |
| NdeII | GATC | 2 cut(s) | 39, 1731 |
| NheI | GCTAGC | 1 cut(s) | 659 |
| NlaIV | GGNNCC | 5 cut(s) | 88, 160, 201, 538, 1668 |
| NmuCI | GTSAC | 3 cut(s) | 172, 502, 1059 |
| NsiI | ATGCAT | 1 cut(s) | 1192 |
| NspI | RCATGY | 5 cut(s) | 151, 948, 1042, 1121, 1177 |
| OliI | CACNNNNGTG | 1 cut(s) | 132 |
| PaqCI | CACCTGC | 1 cut(s) | 98 |
| PciI | ACATGT | 2 cut(s) | 944, 1117 |
| PciSI | GCTCTTC | 1 cut(s) | 302 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 652 |
| PctI | GAATGC | 1 cut(s) | 1345 |
| PfeI | GAWTC | 3 cut(s) | 610, 1112, 1164 |
| PkrI | GCNGC | 4 cut(s) | 68, 1382, 1585, 1600 |
| PleI | GAGTC | 2 cut(s) | 161, 1066 |
| PmaCI | CACGTG | 2 cut(s) | 507, 656 |
| PmlI | CACGTG | 2 cut(s) | 507, 656 |
| PpsI | GAGTC | 2 cut(s) | 161, 1066 |
| Ppu21I | YACGTR | 4 cut(s) | 290, 411, 507, 656 |
| PscI | ACATGT | 2 cut(s) | 944, 1117 |
| PshBI | ATTAAT | 2 cut(s) | 360, 630 |
| PsiI | TTATAA | 1 cut(s) | 1290 |
| PspCI | CACGTG | 2 cut(s) | 507, 656 |
| PspN4I | GGNNCC | 5 cut(s) | 88, 160, 201, 538, 1668 |
| PspPI | GGNCC | 1 cut(s) | 536 |
| PstI | CTGCAG | 1 cut(s) | 119 |
| PvuII | CAGCTG | 1 cut(s) | 1568 |
| RsaI | GTAC | 3 cut(s) | 413, 566, 1081 |
| RsaNI | GTAC | 3 cut(s) | 412, 565, 1080 |
| RseI | CAYNNNNRTG | 1 cut(s) | 132 |
| SapI | GCTCTTC | 1 cut(s) | 302 |
| SaqAI | TTAA | 8 cut(s) | 360, 630, 696, 789, 1023, 1122, 1680, 1715 |
| SatI | GCNGC | 4 cut(s) | 67, 1381, 1584, 1599 |
| Sau3AI | GATC | 2 cut(s) | 39, 1731 |
| Sau96I | GGNCC | 1 cut(s) | 536 |
| ScaI | AGTACT | 1 cut(s) | 1081 |
| SchI | GAGTC | 2 cut(s) | 161, 1067 |
| SduI | GDGCHC | 2 cut(s) | 129, 577 |
| SfaNI | GCATC | 6 cut(s) | 505, 507, 976, 1080, 1199, 1595 |
| SfcI | CTRYAG | 1 cut(s) | 115 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 132 |
| SmlI | CTYRAG | 1 cut(s) | 420 |
| SmoI | CTYRAG | 1 cut(s) | 420 |
| SsiI | CCGC | 3 cut(s) | 141, 763, 1723 |
| SspMI | CTAG | 7 cut(s) | 660, 851, 1047, 1083, 1169, 1497, 1701 |
| StyI | CCWWGG | 1 cut(s) | 525 |
| TaaI | ACNGT | 1 cut(s) | 131 |
| TaiI | ACGT | 6 cut(s) | 292, 413, 456, 509, 570, 658 |
| TaqI | TCGA | 3 cut(s) | 613, 780, 1128 |
| TaqII | GACCGA | 1 cut(s) | 820 |
| TatI | WGTACW | 1 cut(s) | 1079 |
| TfiI | GAWTC | 3 cut(s) | 610, 1112, 1164 |
| Tru1I | TTAA | 8 cut(s) | 360, 630, 696, 789, 1023, 1122, 1680, 1715 |
| Tru9I | TTAA | 8 cut(s) | 360, 630, 696, 789, 1023, 1122, 1680, 1715 |
| TscAI | CASTG | 2 cut(s) | 33, 577 |
| TseFI | GTSAC | 3 cut(s) | 172, 502, 1059 |
| TseI | GCWGC | 4 cut(s) | 66, 1380, 1583, 1598 |
| Tsp45I | GTSAC | 3 cut(s) | 172, 502, 1059 |
| TspDTI | ATGAA | 9 cut(s) | 320, 759, 945, 960, 996, 1142, 1187, 1195, 1401 |
| TspGWI | ACGGA | 1 cut(s) | 143 |
| TspRI | CASTG | 2 cut(s) | 33, 577 |
| VspI | ATTAAT | 2 cut(s) | 360, 630 |
| XapI | RAATTY | 3 cut(s) | 833, 912, 962 |
| XbaI | TCTAGA | 2 cut(s) | 1046, 1700 |
| XceI | RCATGY | 5 cut(s) | 151, 948, 1042, 1121, 1177 |
| XspI | CTAG | 7 cut(s) | 660, 851, 1047, 1083, 1169, 1497, 1701 |
| ZrmI | AGTACT | 1 cut(s) | 1081 |
| Zsp2I | ATGCAT | 1 cut(s) | 1192 |