pycom14g02720

Alpha beta hydrolase domain-containing protein 11-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
OG0014370
Physical Location & Seq
Reverse (-)
2086479 .. 2088991
2513 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 972 bp
ATGGCGCGAACCGTCGGAAGCAAACCGGGTCTTCATGCCCTCCTGACCCGATTCGTTATCTCACGACGGCCATTGCAAACGCTAGCTTACGAAGAGCTCCGACCCTTCGCCGACCCACAACCCTACCGCACCACCGCTTTCGTCCTCCACGGCCTTCTGGGCTCCGCCAGAACCTGGCGATCTTTCTCCCGCACCCTCCTCTCCAATCTCCCCAACCCATCTGGTTGGAGAATGGTGCTTGTGGATTTGAGGAACCATGGGAGGTCGGCGGAGCTCGAAGGTCTGAACCCGCCTCACGATTTGGTCAATTCGGCCCAAGATTTGGCTAATTTGATCCGGACTCAAGGTTGGGACTGGCCGGATGTTGTTCTCGGCCACTCCTTTGGCGGGAAGGTTGCTCTGCAATTTGCACAAAGCTGTGCTCGTGGTGACTATGGTGATTCTGCCAAGTTGCCCAAGCAGCTGTGGGTGTTGGATTCCGTTCCAGGAGAAGTGAACCCTGAAAACAGAAATAGGGAAGTTGAGAAGGTTTTGCACACATTGCGGAGTCTACCTTCACCAGTTCCATCACGAAAGTGGCTCATGAATCATTTGCTTGAGCTCGGGTTCTCAAACTCATTGTCACACTGGATAGGCAGCAACCTCAAGAAACATGGAGATCATTTGACATGGGCGTTCAATCTTGACGTTGCTATCCAGATGTTCGATTCTTTCCAGGAAAAGTCTTATTGGCCTCTGTTGGAGCACCCCCCGCAAGATATGGATATAGCTATTGTGCGCGCTGAGGACAGTAATCGTTGGGACCAAGTTGCGATTCAACAACTCGAAAACCTTGCCACTCGCGGAGCAGATGGATCGGAGGGGAATGTTTCAGCTCATGTTCTTCCCAAGTCCGGCCATTGGGTTCACGTCGACAATCCAAAAGGTCTCCTTGAGATTGTGGGTCCTAAGCTTGCATCCCTTCGGCCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Abhydrolase_6

Protein Analysis

324

Amino Acids

36.19

Weight (kDa)

7.98

Isoelectric Point (pI)

39.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Hydrolase_4 PF12146 45 - 141 1.4e-06 Serine aminopeptidase, S33
Thioesterase PF00975 47 - 183 1.1e-06 Thioesterase domain
Abhydrolase_6 PF12697 48 - 311 5.1e-16 Alpha/beta hydrolase family
Abhydrolase_1 PF00561 48 - 138 2.2e-10 alpha/beta hydrolase fold
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014370)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G52570
fragaria_vesca FvH4_6g19320
malus_domestica MD12G1028900.v1.1
prunus_persica Prupe.7G102600_v2.0.a1 Prupe.7G102600_v2.0.a1
pyrus_communis pycom12g02770 pycom14g02720
rosa_chinensis RchiOBHm_Chr3g0474561
rosa_laevigata RLG00000023911
rosa_multiflora Rmu_sc0000535.1_g000018
rosa_roxburghii Rroxscaffold_6G00407070
rosa_rugosa Rorug03G0141500
rosa_samantha Rh3AG192200 Rh3BG222100 Rh3CG216800 Rh3DG217600
rosa_wichuraiana Rw3G017540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 174, 322
AccI GTMKAC 2 cut(s) 550, 912
AccII CGCG 3 cut(s) 7, 780, 843
AccIII TCCGGA 1 cut(s) 336
AclWI GGATC 2 cut(s) 328, 862
AcoI YGGCCR 4 cut(s) 68, 356, 373, 895
AfiI CCNNNNNNNGG 5 cut(s) 174, 322, 387, 893, 900
AgsI TTSAA 2 cut(s) 679, 818
AjiI CACGTC 1 cut(s) 910
AjnI CCWGG 3 cut(s) 173, 484, 714
AjuI GAANNNNNNNTTGG 2 cut(s) 798, 830
AleI CACNNNNGTG 1 cut(s) 574
AluBI AGCT 9 cut(s) 86, 97, 274, 417, 463, 601, 770, 875, 952
AluI AGCT 9 cut(s) 86, 97, 274, 417, 463, 601, 770, 875, 952
Alw21I GWGCWC 5 cut(s) 99, 276, 424, 603, 747
Alw26I GTCTC 1 cut(s) 932
AlwI GGATC 2 cut(s) 328, 862
AlwNI CAGNNNCTG 1 cut(s) 174
Ama87I CYCGRG 1 cut(s) 602
Aor13HI TCCGGA 1 cut(s) 336
AoxI GGCC 8 cut(s) 68, 151, 312, 356, 373, 731, 895, 965
ApeKI GCWGC 2 cut(s) 460, 636
ArsI GACNNNNNNTTYG 2 cut(s) 605, 637
AspLEI GCGC 3 cut(s) 7, 780, 782
AspS9I GGNCC 3 cut(s) 313, 802, 944
AsuC2I CCSGG 1 cut(s) 27
AsuHPI GGTGA 3 cut(s) 440, 449, 549
AsuNHI GCTAGC 1 cut(s) 82
AvaI CYCGRG 1 cut(s) 602
AvaII GGWCC 2 cut(s) 802, 944
BanII GRGCYC 4 cut(s) 99, 164, 276, 603
BauI CACGAG 1 cut(s) 423
BbsI GAAGAC 1 cut(s) 23
Bbv12I GWGCWC 5 cut(s) 99, 276, 424, 603, 747
BbvCI CCTCAGC 1 cut(s) 783
BbvI GCAGC 2 cut(s) 472, 648
BccI CCATC 3 cut(s) 226, 574, 845
BceAI ACGGC 2 cut(s) 83, 166
BcgI CGANNNNNNTGC 4 cut(s) 815, 837, 849, 871
BciT130I CCWGG 3 cut(s) 175, 486, 716
BcnI CCSGG 1 cut(s) 27
BcoDI GTCTC 1 cut(s) 932
BfaI CTAG 1 cut(s) 83
BglI GCCNNNNNGGC 1 cut(s) 159
BisI GCNGC 2 cut(s) 461, 637
BlsI GCNGC 2 cut(s) 462, 638
Bme1390I CCNGG 4 cut(s) 27, 175, 486, 716
Bme18I GGWCC 2 cut(s) 802, 944
BmeT110I CYCGRG 1 cut(s) 602
BmgBI CACGTC 1 cut(s) 910
BmgT120I GGNCC 3 cut(s) 313, 802, 944
BmiI GGNNCC 4 cut(s) 163, 254, 803, 945
BmrFI CCNGG 4 cut(s) 27, 175, 486, 716
BmsI GCATC 1 cut(s) 965
BmtI GCTAGC 1 cut(s) 86
BpiI GAAGAC 1 cut(s) 23
Bpu10I CCTNAGC 2 cut(s) 783, 948
BpuEI CTTGAG 4 cut(s) 327, 617, 629, 953
BpuMI CCSGG 1 cut(s) 27
BsaI GGTCTC 1 cut(s) 932
BsaJI CCNNGG 2 cut(s) 148, 256
BsaWI WCCGGW 1 cut(s) 336
Bsc4I CCNNNNNNNGG 5 cut(s) 174, 322, 387, 893, 900
Bse1I ACTGG 3 cut(s) 359, 560, 632
Bse3DI GCAATG 2 cut(s) 71, 539
BseAI TCCGGA 1 cut(s) 336
BseBI CCWGG 3 cut(s) 175, 486, 716
BseDI CCNNGG 2 cut(s) 148, 256
BseGI GGATG 2 cut(s) 367, 956
BseLI CCNNNNNNNGG 5 cut(s) 174, 322, 387, 893, 900
BseMI GCAATG 2 cut(s) 71, 539
BseMII CTCAG 1 cut(s) 774
BseNI ACTGG 3 cut(s) 359, 560, 632
BsePI GCGCGC 1 cut(s) 778
BseRI GAGGAG 1 cut(s) 188
BseXI GCAGC 2 cut(s) 472, 648
Bsh1236I CGCG 3 cut(s) 7, 780, 843
BshFI GGCC 8 cut(s) 70, 153, 314, 358, 375, 733, 897, 967
BsiHKAI GWGCWC 5 cut(s) 99, 276, 424, 603, 747
BsiHKCI CYCGRG 1 cut(s) 602
BsiSI CCGG 4 cut(s) 26, 337, 359, 894
BslFI GGGAC 2 cut(s) 365, 815
BslI CCNNNNNNNGG 5 cut(s) 174, 322, 387, 893, 900
BsmAI GTCTC 1 cut(s) 932
BsmFI GGGAC 2 cut(s) 365, 815
BsnI GGCC 8 cut(s) 70, 153, 314, 358, 375, 733, 897, 967
Bso31I GGTCTC 1 cut(s) 932
BsoBI CYCGRG 1 cut(s) 602
Bsp1286I GDGCHC 6 cut(s) 99, 164, 276, 424, 603, 747
Bsp13I TCCGGA 1 cut(s) 336
Bsp143I GATC 4 cut(s) 179, 333, 658, 854
Bsp19I CCATGG 1 cut(s) 256
BspANI GGCC 8 cut(s) 70, 153, 314, 358, 375, 733, 897, 967
BspCNI CTCAG 1 cut(s) 775
BspEI TCCGGA 1 cut(s) 336
BspFNI CGCG 3 cut(s) 7, 780, 843
BspHI TCATGA 1 cut(s) 582
BspLI GGNNCC 4 cut(s) 163, 254, 803, 945
BspOI GCTAGC 1 cut(s) 86
BspPI GGATC 2 cut(s) 328, 862
BspQI GCTCTTC 1 cut(s) 87
BspTNI GGTCTC 1 cut(s) 932
BsrDI GCAATG 2 cut(s) 71, 539
BsrI ACTGG 3 cut(s) 359, 560, 632
BssECI CCNNGG 2 cut(s) 148, 256
BssHII GCGCGC 1 cut(s) 778
BssMI GATC 4 cut(s) 179, 333, 658, 854
BssSI CACGAG 1 cut(s) 423
BssT1I CCWWGG 1 cut(s) 256
Bst2BI CACGAG 1 cut(s) 423
Bst2UI CCWGG 3 cut(s) 175, 486, 716
Bst4CI ACNGT 2 cut(s) 13, 791
Bst6I CTCTTC 1 cut(s) 87
BstAPI GCANNNNNTGC 1 cut(s) 541
BstC8I GCNNGC 3 cut(s) 84, 780, 954
BstDEI CTNAG 2 cut(s) 783, 948
BstDSI CCRYGG 2 cut(s) 148, 256
BstF5I GGATG 2 cut(s) 367, 956
BstFNI CGCG 3 cut(s) 7, 780, 843
BstHHI GCGC 3 cut(s) 7, 780, 782
BstKTI GATC 4 cut(s) 182, 336, 661, 857
BstMAI GTCTC 1 cut(s) 932
BstMBI GATC 4 cut(s) 179, 333, 658, 854
BstMWI GCNNNNNNNGC 4 cut(s) 159, 460, 541, 751
BstNI CCWGG 3 cut(s) 175, 486, 716
BstSCI CCNGG 4 cut(s) 25, 173, 484, 714
BstUI CGCG 3 cut(s) 7, 780, 843
BstV1I GCAGC 2 cut(s) 472, 648
BstV2I GAAGAC 1 cut(s) 23
BstXI CCANNNNNNTGG 2 cut(s) 225, 383
BsuRI GGCC 8 cut(s) 70, 153, 314, 358, 375, 733, 897, 967
BtgI CCRYGG 2 cut(s) 148, 256
BtrI CACGTC 1 cut(s) 910
BtsCI GGATG 2 cut(s) 367, 956
BtsIMutI CAGTG 1 cut(s) 625
Cac8I GCNNGC 3 cut(s) 84, 780, 954
CaiI CAGNNNCTG 1 cut(s) 174
CciI TCATGA 1 cut(s) 582
CfoI GCGC 3 cut(s) 7, 780, 782
Cfr13I GGNCC 3 cut(s) 313, 802, 944
CviAII CATG 6 cut(s) 35, 257, 583, 653, 669, 878
DdeI CTNAG 2 cut(s) 783, 948
DpnI GATC 4 cut(s) 181, 335, 660, 856
DpnII GATC 4 cut(s) 179, 333, 658, 854
EaeI YGGCCR 4 cut(s) 68, 356, 373, 895
Eam1104I CTCTTC 1 cut(s) 87
EarI CTCTTC 1 cut(s) 87
EciI GGCGGA 2 cut(s) 154, 284
Ecl136II GAGCTC 3 cut(s) 97, 274, 601
Eco130I CCWWGG 1 cut(s) 256
Eco24I GRGCYC 4 cut(s) 99, 164, 276, 603
Eco31I GGTCTC 1 cut(s) 932
Eco47I GGWCC 2 cut(s) 802, 944
Eco53kI GAGCTC 3 cut(s) 97, 274, 601
Eco88I CYCGRG 1 cut(s) 602
EcoICRI GAGCTC 3 cut(s) 97, 274, 601
EcoO109I RGGNCCY 1 cut(s) 944
EcoRII CCWGG 3 cut(s) 173, 484, 714
EcoT14I CCWWGG 1 cut(s) 256
EcoT38I GRGCYC 4 cut(s) 99, 164, 276, 603
ErhI CCWWGG 1 cut(s) 256
FaeI CATG 6 cut(s) 38, 260, 586, 656, 672, 881
FaiI YATR 9 cut(s) 36, 258, 435, 584, 654, 670, 761, 767, 879
FalI AAGNNNNNCTT 2 cut(s) 915, 947
FaqI GGGAC 2 cut(s) 365, 815
FatI CATG 6 cut(s) 34, 256, 582, 652, 668, 877
FauI CCCGC 4 cut(s) 197, 297, 380, 759
FblI GTMKAC 2 cut(s) 550, 912
Fnu4HI GCNGC 2 cut(s) 461, 637
FokI GGATG 2 cut(s) 374, 943
FriOI GRGCYC 4 cut(s) 99, 164, 276, 603
Fsp4HI GCNGC 2 cut(s) 461, 637
FspBI CTAG 1 cut(s) 83
GlaI GCGC 3 cut(s) 6, 779, 781
GluI GCNGC 2 cut(s) 461, 637
HaeIII GGCC 8 cut(s) 70, 153, 314, 358, 375, 733, 897, 967
HapII CCGG 4 cut(s) 26, 337, 359, 894
HhaI GCGC 3 cut(s) 7, 780, 782
Hin1II CATG 6 cut(s) 38, 260, 586, 656, 672, 881
Hin6I GCGC 3 cut(s) 5, 778, 780
HinP1I GCGC 3 cut(s) 5, 778, 780
HincII GTYRAC 1 cut(s) 913
HindII GTYRAC 1 cut(s) 913
HindIII AAGCTT 1 cut(s) 950
HinfI GANTC 8 cut(s) 51, 340, 440, 476, 547, 586, 707, 814
HpaII CCGG 4 cut(s) 26, 337, 359, 894
HphI GGTGA 3 cut(s) 440, 449, 549
Hpy166II GTNNAC 4 cut(s) 496, 551, 907, 913
Hpy188I TCNGA 4 cut(s) 17, 101, 285, 859
Hpy188III TCNNGA 9 cut(s) 43, 63, 296, 337, 570, 583, 646, 683, 697
Hpy8I GTNNAC 4 cut(s) 496, 551, 907, 913
Hpy99I CGWCG 3 cut(s) 17, 69, 914
HpyAV CCTTC 7 cut(s) 115, 164, 272, 385, 520, 564, 971
HpyCH4III ACNGT 2 cut(s) 13, 791
HpyCH4IV ACGT 2 cut(s) 687, 909
HpyCH4V TGCA 5 cut(s) 76, 403, 410, 535, 956
HpyF10VI GCNNNNNNNGC 4 cut(s) 159, 460, 541, 751
HpyF3I CTNAG 2 cut(s) 783, 948
HpySE526I ACGT 2 cut(s) 687, 909
Hsp92II CATG 6 cut(s) 38, 260, 586, 656, 672, 881
HspAI GCGC 3 cut(s) 5, 778, 780
Kpn2I TCCGGA 1 cut(s) 336
Kzo9I GATC 4 cut(s) 179, 333, 658, 854
LguI GCTCTTC 1 cut(s) 87
LmnI GCTCC 5 cut(s) 102, 167, 271, 742, 845
Lsp1109I GCAGC 2 cut(s) 472, 648
LweI GCATC 1 cut(s) 965
MaeI CTAG 1 cut(s) 83
MaeII ACGT 2 cut(s) 687, 909
MaeIII GTNAC 2 cut(s) 428, 621
MalI GATC 4 cut(s) 181, 335, 660, 856
MboI GATC 4 cut(s) 179, 333, 658, 854
MboII GAAGA 3 cut(s) 23, 104, 875
MhlI GDGCHC 6 cut(s) 99, 164, 276, 424, 603, 747
MluCI AATT 3 cut(s) 307, 328, 404
MlyI GAGTC 2 cut(s) 334, 556
MmeI TCCRAC 4 cut(s) 124, 206, 453, 720
MroI TCCGGA 1 cut(s) 336
MseI TTAA 1 cut(s) 970
MslI CAYNNNNRTG 1 cut(s) 574
MspA1I CMGCKG 1 cut(s) 463
MspI CCGG 4 cut(s) 26, 337, 359, 894
MspR9I CCNGG 4 cut(s) 27, 175, 486, 716
MvaI CCWGG 3 cut(s) 175, 486, 716
MvnI CGCG 3 cut(s) 7, 780, 843
MwoI GCNNNNNNNGC 4 cut(s) 159, 460, 541, 751
NciI CCSGG 1 cut(s) 27
NcoI CCATGG 1 cut(s) 256
NdeII GATC 4 cut(s) 179, 333, 658, 854
NheI GCTAGC 1 cut(s) 82
NlaIII CATG 6 cut(s) 38, 260, 586, 656, 672, 881
NlaIV GGNNCC 4 cut(s) 163, 254, 803, 945
NmeAIII GCCGAG 1 cut(s) 351
NmuCI GTSAC 2 cut(s) 428, 621
OliI CACNNNNGTG 1 cut(s) 574
PagI TCATGA 1 cut(s) 582
PauI GCGCGC 1 cut(s) 778
PciSI GCTCTTC 1 cut(s) 87
PfeI GAWTC 6 cut(s) 51, 440, 476, 586, 707, 814
PflMI CCANNNNNTGG 2 cut(s) 174, 322
PfoI TCCNGGA 2 cut(s) 484, 714
PkrI GCNGC 2 cut(s) 462, 638
PleI GAGTC 2 cut(s) 334, 555
PpsI GAGTC 2 cut(s) 334, 555
PpuMI RGGWCCY 1 cut(s) 944
Psp124BI GAGCTC 3 cut(s) 99, 276, 603
Psp5II RGGWCCY 1 cut(s) 944
Psp6I CCWGG 3 cut(s) 173, 484, 714
PspGI CCWGG 3 cut(s) 173, 484, 714
PspN4I GGNNCC 4 cut(s) 163, 254, 803, 945
PspPI GGNCC 3 cut(s) 313, 802, 944
PspPPI RGGWCCY 1 cut(s) 944
PstNI CAGNNNCTG 1 cut(s) 174
PteI GCGCGC 1 cut(s) 778
PvuII CAGCTG 1 cut(s) 463
RseI CAYNNNNRTG 1 cut(s) 574
SacI GAGCTC 3 cut(s) 99, 276, 603
SalI GTCGAC 1 cut(s) 911
SapI GCTCTTC 1 cut(s) 87
SaqAI TTAA 1 cut(s) 970
SatI GCNGC 2 cut(s) 461, 637
Sau3AI GATC 4 cut(s) 179, 333, 658, 854
Sau96I GGNCC 3 cut(s) 313, 802, 944
SchI GAGTC 2 cut(s) 334, 556
ScrFI CCNGG 4 cut(s) 27, 175, 486, 716
SduI GDGCHC 6 cut(s) 99, 164, 276, 424, 603, 747
SfaNI GCATC 1 cut(s) 965
SinI GGWCC 2 cut(s) 802, 944
SmiMI CAYNNNNRTG 1 cut(s) 574
SmlI CTYRAG 4 cut(s) 342, 596, 644, 932
SmoI CTYRAG 4 cut(s) 342, 596, 644, 932
Sse9I AATT 3 cut(s) 307, 328, 404
SspMI CTAG 1 cut(s) 83
SstI GAGCTC 3 cut(s) 99, 276, 603
StyD4I CCNGG 4 cut(s) 25, 173, 484, 714
StyI CCWWGG 1 cut(s) 256
TaaI ACNGT 2 cut(s) 13, 791
TaiI ACGT 2 cut(s) 690, 912
TaqI TCGA 4 cut(s) 276, 705, 825, 912
TasI AATT 3 cut(s) 307, 328, 404
TfiI GAWTC 6 cut(s) 51, 440, 476, 586, 707, 814
Tru1I TTAA 1 cut(s) 970
Tru9I TTAA 1 cut(s) 970
TscAI CASTG 1 cut(s) 632
TseFI GTSAC 2 cut(s) 428, 621
TseI GCWGC 2 cut(s) 460, 636
Tsp45I GTSAC 2 cut(s) 428, 621
TspDTI ATGAA 2 cut(s) 23, 599
TspGWI ACGGA 1 cut(s) 469
TspRI CASTG 1 cut(s) 632
Van91I CCANNNNNTGG 2 cut(s) 174, 322
VpaK11BI GGWCC 2 cut(s) 802, 944
XcmI CCANNNNNNNNNTGG 1 cut(s) 573
XmiI GTMKAC 2 cut(s) 550, 912
XspI CTAG 1 cut(s) 83
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.