Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr14

Orthogroup ID

OG0009540

Physical Location & Seq

Genomic Coordinates Reverse (-)

6228572 .. 6235130

Gene Structure 6559 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom14g06340.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3033 bp

ATGGTCCGATCCTGTGCAATGCTATCAACAAGATTCAACCAGGAGCAGTGCCCAAGCCAACTGCCTTTGCAATCATTAAGTCGGGAATCTCAAGCACTGCCTGCATATCAGTACTTTGAGAATGTCCGTAACTTTCTGGTCGCTGTGGAAGAGTTGAAGCTGCCTGCTTTTGAAGCTTCTAACCTCGAAAGGGATGCAATGGAGGCAGGGTCAGCAGCCAAGGTTGTTGACTGTGTTTTAGCCCTTAAATCGTATTATGAGTGGAAGCAGATGAGCAATGGGAATGGATTTACTAAATATGTGAAATCTCCTCTAGTTATGGTTTCTGCCAATAGACTGCATTCAAGGGCCTCAACTGTAGTCCCATCAGACTCTTGCATGCACTTGGATATGTCTGCCGTATGCGAGAGACAACCACCAGTTGAGGGTGACAACCAGAAAGTTGAAGCAATAATAATATGGAAATGGCAATGTATGATTTTCAATTTCCAGGATCTCAAGGCCTTGTGGTTAAGTGCAAAACGGGACTTTGAAGACTTACAAACACAATTGAATAGAGATTTGAAATGCTTGGTTAATCAGGTGCAGGAGTTGTCAACTGCCGCACTCGGGTATTACAAGGTGGTGAAAGAGAATCAAAAGCTATACAACATGGTTCAGGATTTGAAAGGTTGCTACTTTTCCCAAACAAAAATGTTAGCTATGCTATCATATTTTAAGTCAACTACAAAAAATTGTTATCTGATCTTGGTTGAAACGGCTTCAGGTAATATTCGAGTTTACTGCCGGATTAGGCCTTCCTTCAGTGATGAATCTGGAAATGTAATAAGTTTTATTGGAGAGGACGGGTCACTTGTGATCTCGGACCCTGCAAAACCCCAAAAGGATGGAAGGAAAGTCTTCCAGTTCAACCGAGTGTTTGGTCCAACTGCGAGGCAAGATGAGGTCTTTAAGGACACTCAACCACTGATCAGGTCTGTGATGGATGGTTACAATGTATGCATTTTTGCTTATGGTCAAACTGGATCCGGTAAAACACATACCATGAGTGGTCCATCAGGTGGGTCAGCTGCGGATATGGGGATTAATTATCTAGCTCTCAGCGATTTGTTCCAAATGTCAAACAAAAGGAAGGATATCATAGATTATGACATTCATGTCCAAATGGTCGAAATTTACAATGAACAAGTACGAGACCTTCTTGCAGAAGATTCATCCACTGCCAAATTAGAGATACGGAGCTGCACTGGTGATAATGGCTTGAGTATCCCAGGTGCTACAATGCATTCAGTGAAGTCTACTACTGATGTCCTGAACCTCATGAAATTTGGTGAGACGAATCGTATGGTCAGTTCGACCGCAATCAATAGCCGCAGTAGCCGTTCCCATAGTGTCCTAACAGTCCATGTGCATGGAAAAGATACTTCCGGAGGTACTCTACGTAGTTGCCTTCATTTGGTTGACCTTGCAGGAAGCGAAAGAGTGGACAAATCTGAAGTTACAGGAGATAGGCTGAAAGAGGCACAGTATATCAACAAGTCTCTTTCATGTTTAGGAGATGTTATCGCAGCCTTGGCTCAGAAGAATTCTCACATCCCTTACAGAAACAGCAAACTCACACTTCTGTTGCAAGACTCCTTAGGTGGACATGCTAAAACTTTAATGCTTGCGCATGCTAGTCCAGAAGAAGATTCCTTCAGTGAAACTATCAGTACATTGAAGTTTGCACAGAGGGTTTCCACCGTTGAACTTGGTGCTGCTCATTCAAACAAGGAGAGCGGTGAGGTTATGAAACTCAGAGAACAGATTGAGAGTCTTAAGAAGGCATTAGCAAACAAAGAAGGTCAGTGTGTGCCAAGAACAATGACTGAGAGAACTCCCCAACGTCTGAGAAGATTAAGCATTGAAAGTTGCAGCACTGTGAAAACCGAGAAGGCAAAAATCCCTTATCTTCCAACTCATTCGAGGAGATTGAGCTTGGAAGGTCCAAGATCAATTAAGAAGGATAATCTGCATATATCGCATGACATGGGGAAAATCCTAACGTCTGAGGCAGTGGCAGTGCAGGAATATGGTCAACTGCAATGTGCAGCAGCAGTCACTACCCCGTTGGGCCATTTCAGTAATGGAGATTCCACATTAGAAGTGTTTTGTCCCAAGGCTCCTCAAAGTCCAACCAGCACTACCTACGAGAAGCAAGTGTTCGAAACACATAGTAGGACACAAGTTCCTTCTCTTCAGAAACCAACAACACCCGAACCTCGTCCCAAGACTCCTCTAAGTCCAGAAAGTGCTACATATCAGAAGCGAGTGTTGGAACCAGGTAGTAGAACACAAGTTCCTTCCCTTCAGAAACCAACAACTCCCAAACCTCGTCCCAGGAAACTTCTAAGTCCAGCAAGTACTACATATCAGAAGCGAGTGTTGGAACCAGGTAGTAGAACCCAAGTTCCTCCTCCTCAGCGACCAACGACACCTGAGCCTCAGACCAAGGCTCCTCGTAGCCCAAAGATGGCTCCTCGCAGCCCAAGGATGGGTAGTTATCAGAAGCAAGGGTTAAAAGCAGAAAACAAGGCACAAGTTCGTCCCTTTCAGCTACCAACAACACCCGAACCAAAAAAGCATTCCAGAAATGAGGTACAGATTGTCATGCAAAGTAAGGTCACCCTTTCTACAGATTACCTGACACCTAATTTGACAAGTAGCACAAGTGGAAAAGGGTCTCAGATAAGGAAATCCCTGCGGACTATTGGAAAACTGATCAATGGCTCTGATAAGAGGAACCAGCAAAGTTTGGTGGAAGCACAGTCAAGTGTTAAATGCGCAACCAATATAAATGATGCAAATTCACCGGTAACAAATAGTGCAAGAACTCTGAGGAGGCAATCACTAACAGGCATTTCGCCACCAGGGTATGACAGACGGTCATCATTAGGAGGGAAGCCAACCAAAACTAGTGCAAACGACAACAGAAATGCCAAAACACCTCCGCCAGTCCGTTCATCAACAAAAAGTAACAAGCGGTGGCTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005856 GO:0005871 GO:0005875 GO:0006928 GO:0007017 GO:0007018 GO:0008150 GO:0009987 GO:0015630 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0032991 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CH Kinesin Microtub_bd

Protein Analysis

1011

Amino Acids

111.93

Weight (kDa)

9.52

Isoelectric Point (pI)

53.86

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009540)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G10310 AT3G10310
fragaria_vesca	FvH4_6g24140 FvH4_6g24140 FvH4_6g24140 FvH4_6g24140 FvH4_6g24140 FvH4_6g24140 FvH4_6g24140
malus_domestica	MD12G1076000.v1.1 MD14G1074400.v1.1
prunus_persica	Prupe.7G055800_v2.0.a1
pyrus_communis	pycom14g06340
rosa_chinensis	RchiOBHm_Chr3g0483041
rosa_laevigata	RLG00000023304
rosa_multiflora	Rmu_sc0000441.1_g000128
rosa_roxburghii	Rroxscaffold_6G00398680
rosa_rugosa	Rorug03G0204100
rosa_samantha	Rh3AG251900 Rh3CG286100 Rh3DG281700
rosa_wichuraiana	Rw3G022800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1157
Acc16I	TGCGCA	2 cut(s)	1671, 2824
AccB7I	CCANNNNNTGG	1 cut(s)	1061
AccBSI	CCGCTC	1 cut(s)	1779
AccI	GTMKAC	1 cut(s)	1298
AccIII	TCCGGA	1 cut(s)	1427
AciI	CCGC	8 cut(s)	603, 1073, 1359, 1372, 1779, 2743, 2990, 3022
AclWI	GGATC	4 cut(s)	3, 501, 1020, 1033
AcsI	RAATTY	4 cut(s)	1173, 1325, 1585, 2845
AcuI	CTGAAG	6 cut(s)	747, 787, 1515, 1681, 2222, 2333
AfaI	GTAC	6 cut(s)	113, 1191, 1435, 1714, 2404, 2640
AfiI	CCNNNNNNNGG	8 cut(s)	190, 425, 609, 1061, 1456, 2512, 2533, 2534
AflII	CTTAAG	1 cut(s)	1817
AgeI	ACCGGT	1 cut(s)	2851
AhdI	GACNNNNNGTC	1 cut(s)	2923
AhlI	ACTAGT	1 cut(s)	2954
AjnI	CCWGG	7 cut(s)	39, 489, 1270, 2320, 2378, 2431, 2908
AjuI	GAANNNNNNNTTGG	6 cut(s)	2297, 2329, 2408, 2440, 2608, 2640
AloI	GAACNNNNNNTCC	4 cut(s)	2323, 2355, 2434, 2466
AluBI	AGCT	9 cut(s)	160, 176, 643, 701, 1070, 1097, 1242, 1977, 2596
AluI	AGCT	9 cut(s)	160, 176, 643, 701, 1070, 1097, 1242, 1977, 2596
Alw26I	GTCTC	5 cut(s)	403, 1188, 1328, 1545, 2727
AlwI	GGATC	4 cut(s)	3, 501, 1020, 1033
Ama87I	CYCGRG	1 cut(s)	608
Aor13HI	TCCGGA	1 cut(s)	1427
AoxI	GGCC	4 cut(s)	348, 501, 794, 2113
ApoI	RAATTY	4 cut(s)	1173, 1325, 1585, 2845
ArsI	GACNNNNNNTTYG	2 cut(s)	2677, 2709
AseI	ATTAAT	1 cut(s)	1086
AsiGI	ACCGGT	1 cut(s)	2851
Asp700I	GAANNNNTTC	1 cut(s)	899
AspLEI	GCGC	2 cut(s)	1672, 2825
AspS9I	GGNCC	7 cut(s)	4, 348, 865, 923, 1052, 1985, 2113
AsuHPI	GGTGA	7 cut(s)	440, 637, 1262, 1343, 1793, 2656, 2841
AsuII	TTCGAA	1 cut(s)	2205
AvaI	CYCGRG	1 cut(s)	608
AvaII	GGWCC	5 cut(s)	4, 865, 923, 1052, 1985
AxyI	CCTNAGG	1 cut(s)	1639
BaeGI	GKGCMC	1 cut(s)	53
BamHI	GGATCC	1 cut(s)	1025
BarI	GAAGNNNNNNTAC	2 cut(s)	1182, 1214
BbsI	GAAGAC	2 cut(s)	540, 892
BbvCI	CCTCAGC	1 cut(s)	2460
BccI	CCATC	7 cut(s)	373, 881, 976, 980, 1063, 2506, 2527
BceAI	ACGGC	3 cut(s)	383, 774, 1365
BcgI	CGANNNNNNTGC	4 cut(s)	176, 210, 765, 799
BciT130I	CCWGG	7 cut(s)	41, 491, 1272, 2322, 2380, 2433, 2910
BciVI	GTATCC	1 cut(s)	1277
BclI	TGATCA	2 cut(s)	969, 2760
BcoDI	GTCTC	5 cut(s)	403, 1188, 1328, 1545, 2727
BcuI	ACTAGT	1 cut(s)	2954
BfaI	CTAG	4 cut(s)	314, 1094, 1677, 2955
BfmI	CTRYAG	3 cut(s)	357, 2673, 3029
BfrI	CTTAAG	1 cut(s)	1817
BfuI	GTATCC	1 cut(s)	1277
BmcAI	AGTACT	2 cut(s)	113, 2404
Bme1390I	CCNGG	7 cut(s)	41, 491, 1272, 2322, 2380, 2433, 2910
Bme18I	GGWCC	5 cut(s)	4, 865, 923, 1052, 1985
BmeRI	GACNNNNNGTC	1 cut(s)	2923
BmeT110I	CYCGRG	1 cut(s)	608
BmgT120I	GGNCC	7 cut(s)	4, 348, 865, 923, 1052, 1985, 2113
BmiI	GGNNCC	8 cut(s)	867, 1027, 2163, 2319, 2430, 2496, 2517, 2783
BmrFI	CCNGG	7 cut(s)	41, 491, 1272, 2322, 2380, 2433, 2910
BmsI	GCATC	2 cut(s)	184, 2830
BpiI	GAAGAC	2 cut(s)	540, 892
Bpu10I	CCTNAGC	2 cut(s)	2460, 2478
Bpu14I	TTCGAA	1 cut(s)	2205
BpuEI	CTTGAG	3 cut(s)	75, 482, 1282
BsaAI	YACGTR	1 cut(s)	1442
BsaI	GGTCTC	2 cut(s)	1188, 2727
BsaJI	CCNNGG	8 cut(s)	219, 1270, 1572, 2157, 2378, 2490, 2528, 2909
BsaWI	WCCGGW	3 cut(s)	1028, 1427, 2851
BsaXI	ACNNNNNCTCC	4 cut(s)	194, 224, 2479, 2509
Bsc4I	CCNNNNNNNGG	8 cut(s)	190, 425, 609, 1061, 1456, 2512, 2533, 2534
Bse118I	RCCGGY	1 cut(s)	2851
Bse1I	ACTGG	5 cut(s)	419, 904, 1027, 1252, 2993
Bse21I	CCTNAGG	1 cut(s)	1639
Bse3DI	GCAATG	5 cut(s)	24, 204, 283, 476, 2090
BseAI	TCCGGA	1 cut(s)	1427
BseBI	CCWGG	7 cut(s)	41, 491, 1272, 2322, 2380, 2433, 2910
BseDI	CCNNGG	8 cut(s)	219, 1270, 1572, 2157, 2378, 2490, 2528, 2909
BseGI	GGATG	6 cut(s)	199, 892, 991, 1214, 1593, 2538
BseLI	CCNNNNNNNGG	8 cut(s)	190, 425, 609, 1061, 1456, 2512, 2533, 2534
BseMI	GCAATG	5 cut(s)	24, 204, 283, 476, 2090
BseNI	ACTGG	5 cut(s)	419, 904, 1027, 1252, 2993
BseRI	GAGGAG	9 cut(s)	300, 1981, 2154, 2265, 2445, 2448, 2487, 2508, 2893
BseSI	GKGCMC	1 cut(s)	53
BsgI	GTGCAG	4 cut(s)	605, 1228, 2084, 2109
Bsh1285I	CGRYCG	1 cut(s)	1359
BshFI	GGCC	4 cut(s)	350, 503, 796, 2115
BshTI	ACCGGT	1 cut(s)	2851
BsiEI	CGRYCG	1 cut(s)	1359
BsiHKCI	CYCGRG	1 cut(s)	608
BsiSI	CCGG	4 cut(s)	787, 1029, 1428, 2852
BslFI	GGGAC	6 cut(s)	347, 539, 2139, 2250, 2361, 2571
BslI	CCNNNNNNNGG	8 cut(s)	190, 425, 609, 1061, 1456, 2512, 2533, 2534
BsmAI	GTCTC	5 cut(s)	403, 1188, 1328, 1545, 2727
BsmBI	CGTCTC	1 cut(s)	1328
BsmFI	GGGAC	6 cut(s)	347, 539, 2139, 2250, 2361, 2571
BsmI	GAATGC	3 cut(s)	340, 1285, 2623
BsnI	GGCC	4 cut(s)	350, 503, 796, 2115
Bso31I	GGTCTC	2 cut(s)	1188, 2727
BsoBI	CYCGRG	1 cut(s)	608
Bsp119I	TTCGAA	1 cut(s)	2205
Bsp1286I	GDGCHC	1 cut(s)	53
Bsp13I	TCCGGA	1 cut(s)	1427
Bsp143I	GATC	8 cut(s)	8, 493, 744, 858, 969, 1025, 1991, 2760
BspACI	CCGC	8 cut(s)	603, 1073, 1359, 1372, 1779, 2743, 2990, 3022
BspANI	GGCC	4 cut(s)	350, 503, 796, 2115
BspEI	TCCGGA	1 cut(s)	1427
BspHI	TCATGA	1 cut(s)	1320
BspLI	GGNNCC	8 cut(s)	867, 1027, 2163, 2319, 2430, 2496, 2517, 2783
BspPI	GGATC	4 cut(s)	3, 501, 1020, 1033
BspT104I	TTCGAA	1 cut(s)	2205
BspTI	CTTAAG	1 cut(s)	1817
BspTNI	GGTCTC	2 cut(s)	1188, 2727
BsrBI	CCGCTC	1 cut(s)	1779
BsrDI	GCAATG	5 cut(s)	24, 204, 283, 476, 2090
BsrFI	RCCGGY	1 cut(s)	2851
BsrI	ACTGG	5 cut(s)	419, 904, 1027, 1252, 2993
BssAI	RCCGGY	1 cut(s)	2851
BssECI	CCNNGG	8 cut(s)	219, 1270, 1572, 2157, 2378, 2490, 2528, 2909
BssMI	GATC	8 cut(s)	8, 493, 744, 858, 969, 1025, 1991, 2760
BssT1I	CCWWGG	5 cut(s)	219, 1572, 2157, 2490, 2528
Bst2UI	CCWGG	7 cut(s)	41, 491, 1272, 2322, 2380, 2433, 2910
Bst4CI	ACNGT	8 cut(s)	233, 358, 1402, 1527, 1744, 1921, 2808, 2925
Bst6I	CTCTTC	2 cut(s)	144, 2241
BstAFI	CTTAAG	1 cut(s)	1817
BstAPI	GCANNNNNTGC	1 cut(s)	101
BstBAI	YACGTR	1 cut(s)	1442
BstBI	TTCGAA	1 cut(s)	2205
BstC8I	GCNNGC	5 cut(s)	102, 165, 380, 1668, 1674
BstEII	GGTNACC	1 cut(s)	2662
BstF5I	GGATG	6 cut(s)	199, 892, 991, 1214, 1593, 2538
BstHHI	GCGC	2 cut(s)	1672, 2825
BstKTI	GATC	8 cut(s)	11, 496, 747, 861, 972, 1028, 1994, 2763
BstMAI	GTCTC	5 cut(s)	403, 1188, 1328, 1545, 2727
BstMBI	GATC	8 cut(s)	8, 493, 744, 858, 969, 1025, 1991, 2760
BstMCI	CGRYCG	1 cut(s)	1359
BstMWI	GCNNNNNNNGC	7 cut(s)	101, 173, 203, 212, 1377, 1574, 2020
BstNI	CCWGG	7 cut(s)	41, 491, 1272, 2322, 2380, 2433, 2910
BstNSI	RCATGY	3 cut(s)	382, 1652, 1676
BstPI	GGTNACC	1 cut(s)	2662
BstSCI	CCNGG	7 cut(s)	39, 489, 1270, 2320, 2378, 2431, 2908
BstSFI	CTRYAG	3 cut(s)	357, 2673, 3029
BstSLI	GKGCMC	1 cut(s)	53
BstSNI	TACGTA	1 cut(s)	1442
BstV2I	GAAGAC	2 cut(s)	540, 892
BstX2I	RGATCY	2 cut(s)	493, 1025
BstXI	CCANNNNNNTGG	2 cut(s)	887, 1412
BstYI	RGATCY	2 cut(s)	493, 1025
Bsu36I	CCTNAGG	1 cut(s)	1639
BsuI	GTATCC	1 cut(s)	1277
BsuRI	GGCC	4 cut(s)	350, 503, 796, 2115
BtsCI	GGATG	6 cut(s)	199, 892, 991, 1214, 1593, 2538
BtsI	GCAGTG	5 cut(s)	53, 95, 1218, 2061, 2067
Cac8I	GCNNGC	5 cut(s)	102, 165, 380, 1668, 1674
CciI	TCATGA	1 cut(s)	1320
CfoI	GCGC	2 cut(s)	1672, 2825
Cfr10I	RCCGGY	1 cut(s)	2851
Cfr13I	GGNCC	7 cut(s)	4, 348, 865, 923, 1052, 1985, 2113
CsiI	ACCWGGT	2 cut(s)	2320, 2431
Csp6I	GTAC	6 cut(s)	112, 1190, 1434, 1713, 2403, 2639
CspAI	ACCGGT	1 cut(s)	2851
CviQI	GTAC	6 cut(s)	112, 1190, 1434, 1713, 2403, 2639
DpnI	GATC	8 cut(s)	10, 495, 746, 860, 971, 1027, 1993, 2762
DpnII	GATC	8 cut(s)	8, 493, 744, 858, 969, 1025, 1991, 2760
DrdI	GACNNNNNNGTC	1 cut(s)	1157
DriI	GACNNNNNGTC	1 cut(s)	2923
DseDI	GACNNNNNNGTC	1 cut(s)	1157
Eam1104I	CTCTTC	2 cut(s)	144, 2241
Eam1105I	GACNNNNNGTC	1 cut(s)	2923
EarI	CTCTTC	2 cut(s)	144, 2241
EciI	GGCGGA	1 cut(s)	2979
Eco105I	TACGTA	1 cut(s)	1442
Eco130I	CCWWGG	5 cut(s)	219, 1572, 2157, 2490, 2528
Eco147I	AGGCCT	2 cut(s)	503, 796
Eco31I	GGTCTC	2 cut(s)	1188, 2727
Eco32I	GATATC	1 cut(s)	1138
Eco47I	GGWCC	5 cut(s)	4, 865, 923, 1052, 1985
Eco57I	CTGAAG	6 cut(s)	747, 787, 1515, 1681, 2222, 2333
Eco81I	CCTNAGG	1 cut(s)	1639
Eco88I	CYCGRG	1 cut(s)	608
Eco91I	GGTNACC	1 cut(s)	2662
EcoO109I	RGGNCCY	1 cut(s)	348
EcoO65I	GGTNACC	1 cut(s)	2662
EcoRI	GAATTC	1 cut(s)	1585
EcoRII	CCWGG	7 cut(s)	39, 489, 1270, 2320, 2378, 2431, 2908
EcoRV	GATATC	1 cut(s)	1138
EcoT14I	CCWWGG	5 cut(s)	219, 1572, 2157, 2490, 2528
EcoT22I	ATGCAT	2 cut(s)	1004, 1287
ErhI	CCWWGG	5 cut(s)	219, 1572, 2157, 2490, 2528
Esp3I	CGTCTC	1 cut(s)	1328
FaqI	GGGAC	6 cut(s)	347, 539, 2139, 2250, 2361, 2571
FbaI	TGATCA	2 cut(s)	969, 2760
FblI	GTMKAC	1 cut(s)	1298
FokI	GGATG	6 cut(s)	206, 899, 998, 1201, 1580, 2545
FspBI	CTAG	4 cut(s)	314, 1094, 1677, 2955
FspI	TGCGCA	2 cut(s)	1671, 2824
GlaI	GCGC	2 cut(s)	1671, 2824
HaeIII	GGCC	4 cut(s)	350, 503, 796, 2115
HapII	CCGG	4 cut(s)	787, 1029, 1428, 2852
HhaI	GCGC	2 cut(s)	1672, 2825
Hin6I	GCGC	2 cut(s)	1670, 2823
HinP1I	GCGC	2 cut(s)	1670, 2823
HincII	GTYRAC	5 cut(s)	229, 597, 723, 1462, 2078
HindII	GTYRAC	5 cut(s)	229, 597, 723, 1462, 2078
HindIII	AAGCTT	1 cut(s)	174
HpaII	CCGG	4 cut(s)	787, 1029, 1428, 2852
HphI	GGTGA	7 cut(s)	440, 637, 1262, 1343, 1793, 2656, 2841
Hpy166II	GTNNAC	9 cut(s)	229, 597, 723, 781, 1299, 1462, 1486, 1646, 2078
Hpy188III	TCNNGA	9 cut(s)	83, 659, 816, 1312, 1321, 1428, 1682, 2285, 2628
Hpy8I	GTNNAC	9 cut(s)	229, 597, 723, 781, 1299, 1462, 1486, 1646, 2078
HpyCH4III	ACNGT	8 cut(s)	233, 358, 1402, 1527, 1744, 1921, 2808, 2925
HpyCH4IV	ACGT	3 cut(s)	1441, 1885, 2045
HpyF10VI	GCNNNNNNNGC	7 cut(s)	101, 173, 203, 212, 1377, 1574, 2020
HpySE526I	ACGT	3 cut(s)	1441, 1885, 2045
HspAI	GCGC	2 cut(s)	1670, 2823
Kpn2I	TCCGGA	1 cut(s)	1427
Ksp22I	TGATCA	2 cut(s)	969, 2760
Kzo9I	GATC	8 cut(s)	8, 493, 744, 858, 969, 1025, 1991, 2760
LmnI	GCTCC	5 cut(s)	43, 1239, 2167, 2500, 2521
LweI	GCATC	2 cut(s)	184, 2830
MabI	ACCWGGT	2 cut(s)	2320, 2431
MaeI	CTAG	4 cut(s)	314, 1094, 1677, 2955
MaeII	ACGT	3 cut(s)	1441, 1885, 2045
MaeIII	GTNAC	9 cut(s)	128, 428, 849, 989, 1498, 2098, 2662, 2854, 3014
MalI	GATC	8 cut(s)	10, 495, 746, 860, 971, 1027, 1993, 2762
MbiI	CCGCTC	1 cut(s)	1779
MboI	GATC	8 cut(s)	8, 493, 744, 858, 969, 1025, 1991, 2760
MfeI	CAATTG	1 cut(s)	548
MflI	RGATCY	2 cut(s)	493, 1025
MhlI	GDGCHC	1 cut(s)	53
MlyI	GAGTC	4 cut(s)	365, 1628, 1822, 2266
MmeI	TCCRAC	5 cut(s)	950, 1979, 2198, 2295, 2406
Mph1103I	ATGCAT	2 cut(s)	1004, 1287
MroI	TCCGGA	1 cut(s)	1427
MroXI	GAANNNNTTC	1 cut(s)	899
MslI	CAYNNNNRTG	1 cut(s)	1410
MspA1I	CMGCKG	1 cut(s)	1070
MspCI	CTTAAG	1 cut(s)	1817
MspI	CCGG	4 cut(s)	787, 1029, 1428, 2852
MspR9I	CCNGG	7 cut(s)	41, 491, 1272, 2322, 2380, 2433, 2910
MunI	CAATTG	1 cut(s)	548
Mva1269I	GAATGC	3 cut(s)	340, 1285, 2623
MvaI	CCWGG	7 cut(s)	41, 491, 1272, 2322, 2380, 2433, 2910
MwoI	GCNNNNNNNGC	7 cut(s)	101, 173, 203, 212, 1377, 1574, 2020
NdeII	GATC	8 cut(s)	8, 493, 744, 858, 969, 1025, 1991, 2760
NlaIV	GGNNCC	8 cut(s)	867, 1027, 2163, 2319, 2430, 2496, 2517, 2783
NmuCI	GTSAC	4 cut(s)	428, 849, 2098, 2662
NsbI	TGCGCA	2 cut(s)	1671, 2824
NsiI	ATGCAT	2 cut(s)	1004, 1287
NspI	RCATGY	3 cut(s)	382, 1652, 1676
NspV	TTCGAA	1 cut(s)	2205
PaeI	GCATGC	2 cut(s)	382, 1676
PagI	TCATGA	1 cut(s)	1320
PceI	AGGCCT	2 cut(s)	503, 796
PctI	GAATGC	3 cut(s)	340, 1285, 2623
PdmI	GAANNNNTTC	1 cut(s)	899
PfeI	GAWTC	8 cut(s)	33, 86, 634, 812, 1211, 1339, 1691, 2132
PflMI	CCANNNNNTGG	1 cut(s)	1061
PfoI	TCCNGGA	1 cut(s)	489
PinAI	ACCGGT	1 cut(s)	2851
PleI	GAGTC	4 cut(s)	365, 1628, 1821, 2266
PpsI	GAGTC	4 cut(s)	365, 1628, 1821, 2266
Ppu21I	YACGTR	1 cut(s)	1442
PshBI	ATTAAT	1 cut(s)	1086
Psp6I	CCWGG	7 cut(s)	39, 489, 1270, 2320, 2378, 2431, 2908
PspEI	GGTNACC	1 cut(s)	2662
PspGI	CCWGG	7 cut(s)	39, 489, 1270, 2320, 2378, 2431, 2908
PspN4I	GGNNCC	8 cut(s)	867, 1027, 2163, 2319, 2430, 2496, 2517, 2783
PspPI	GGNCC	7 cut(s)	4, 348, 865, 923, 1052, 1985, 2113
PsrI	GAACNNNNNNTAC	2 cut(s)	1336, 1368
PsuI	RGATCY	2 cut(s)	493, 1025
PvuII	CAGCTG	1 cut(s)	1070
RsaI	GTAC	6 cut(s)	113, 1191, 1435, 1714, 2404, 2640
RsaNI	GTAC	6 cut(s)	112, 1190, 1434, 1713, 2403, 2639
RseI	CAYNNNNRTG	1 cut(s)	1410
Sau3AI	GATC	8 cut(s)	8, 493, 744, 858, 969, 1025, 1991, 2760
Sau96I	GGNCC	7 cut(s)	4, 348, 865, 923, 1052, 1985, 2113
ScaI	AGTACT	2 cut(s)	113, 2404
SchI	GAGTC	4 cut(s)	365, 1628, 1822, 2266
ScrFI	CCNGG	7 cut(s)	41, 491, 1272, 2322, 2380, 2433, 2910
SduI	GDGCHC	1 cut(s)	53
SexAI	ACCWGGT	2 cut(s)	2320, 2431
SfaNI	GCATC	2 cut(s)	184, 2830
SfcI	CTRYAG	3 cut(s)	357, 2673, 3029
SfuI	TTCGAA	1 cut(s)	2205
SinI	GGWCC	5 cut(s)	4, 865, 923, 1052, 1985
SmiMI	CAYNNNNRTG	1 cut(s)	1410
SmlI	CTYRAG	4 cut(s)	90, 497, 1261, 1817
SmoI	CTYRAG	4 cut(s)	90, 497, 1261, 1817
SnaBI	TACGTA	1 cut(s)	1442
SpeI	ACTAGT	1 cut(s)	2954
SphI	GCATGC	2 cut(s)	382, 1676
SseBI	AGGCCT	2 cut(s)	503, 796
SsiI	CCGC	8 cut(s)	603, 1073, 1359, 1372, 1779, 2743, 2990, 3022
SspI	AATATT	1 cut(s)	772
SspMI	CTAG	4 cut(s)	314, 1094, 1677, 2955
StuI	AGGCCT	2 cut(s)	503, 796
StyD4I	CCNGG	7 cut(s)	39, 489, 1270, 2320, 2378, 2431, 2908
StyI	CCWWGG	5 cut(s)	219, 1572, 2157, 2490, 2528
TaaI	ACNGT	8 cut(s)	233, 358, 1402, 1527, 1744, 1921, 2808, 2925
TaiI	ACGT	3 cut(s)	1444, 1888, 2048
TaqI	TCGA	6 cut(s)	186, 775, 1170, 1355, 1964, 2205
TatI	WGTACW	3 cut(s)	111, 1712, 2402
TauI	GCSGC	2 cut(s)	605, 1374
TfiI	GAWTC	8 cut(s)	33, 86, 634, 812, 1211, 1339, 1691, 2132
TseFI	GTSAC	4 cut(s)	428, 849, 2098, 2662
Tsp45I	GTSAC	4 cut(s)	428, 849, 2098, 2662
TspDTI	ATGAA	9 cut(s)	825, 1145, 1197, 1203, 1337, 1442, 1536, 1805, 2991
TspGWI	ACGGA	3 cut(s)	116, 1252, 2987
Van91I	CCANNNNNTGG	1 cut(s)	1061
Vha464I	CTTAAG	1 cut(s)	1817
VpaK11BI	GGWCC	5 cut(s)	4, 865, 923, 1052, 1985
VspI	ATTAAT	1 cut(s)	1086
XapI	RAATTY	4 cut(s)	1173, 1325, 1585, 2845
XceI	RCATGY	3 cut(s)	382, 1652, 1676
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2123
XmiI	GTMKAC	1 cut(s)	1298
XmnI	GAANNNNTTC	1 cut(s)	899
XspI	CTAG	4 cut(s)	314, 1094, 1677, 2955
ZrmI	AGTACT	2 cut(s)	113, 2404
Zsp2I	ATGCAT	2 cut(s)	1004, 1287

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.