Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3A

Orthogroup ID

OG0009540

Physical Location & Seq

Genomic Coordinates Forward (+)

27191443 .. 27206123

Gene Structure 14681 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3AG251900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2835 bp

ATGGAGGACCGATCAAGAACTGGGTTGCACGATTTTACTAGGGCTTCAAGAAAGGCTGAAGAATCAGCCTGGAGGCGATTTCAAGCAGTTGAGTGGCTTGAGAGCTTTGTGGGTCCACTTGGCATACCGAACCAGCCATCGGAGAAGGAGTTCATTTCTTGCCTGAGAAATGGTCTCATCCTATGCAATGCCATAAACAAGATTCAACCCGCATCAGTGCCCAGGGTGGTGGAGAGCCAAATACCTTTACAATCACTAAGCAGGGAATCTCAACCATTGCCTGCATATCAGTACTTTGAGAATGTCCGAAACTTTCTGGTTGCTGCTGAAGAGTTAAAGCTGCCTGCTTTTGAAGCCTCTGACCTTGAAAGGGATACATTGGACGCAGGGTCTGCAGGGAAGGTCGTTGATTGTGTTTTAGCCCTTAGATCCTATAATGAGTGGAAGCAGATGAGCAATGGGAATGGATGTTATAAACATATAAAATCTCCCTTAGTTATGCATTCTGCCAATAGAATGCATTCAAGACCCCCAGCTATGGTCTCCTCGCACTCTTGCAGGAACTTGGATATGTCTGCTGGACTTGATAGACAACTATCGATCGAGGATGACAAACGGAAACCTGAAGTGGATTCTATAGAATCTGTTGTCAAGTTAATTGCTACTTCTATGGTTGACATAAAGGAAAACATTGATGATAACCTTCTTGCTTCCTACCATAACGGAGATCTGGATGCTGTTAGTGTCTTTAGAAGGATCATGACAAGTTGTCTAGAGGAACATTTTCAAAAGAAGTTACCTGAGTTGGAGTGTACGTTAAAAGAATCCTCCAAAGGAAGAAGCAGCTCACCTGCACATTCAACATCTATTCCTCTAGAGGATATATCTGCTGTTGAAAATTCAAGAAGTGGTCCATCTGGTGGGTTAACTAGCGACATGGGGATTAATTATCTAGCTCTCAACGATCTCTTCCAGATGTCAAAAAGAAGGAAGGATATCATACATTATGACATTCATGTTCAAATGGTTGAAATTTACAATGAACAAGTACGAGATCTTCTTGTACAAGATTCATGTACTGTCAAATATCCTTTCATATTGGTTATTTATCTTACTTTAAACATTTATCTTATTGGAAAGAAAAACTGGCCACGTTCATTTTGTGTATCCTTAACAATTCACAAATTAGAGATCCGGAGCTGCACCGGTGATAATGGCTTGAGTATTCCAGATGCTACAATGCATTCAGTGAATTCAACCACTGATGTTCTTAACCTCATGAAATACGGTGAGGTGAATCGAGTTGTCAGTACTACTGCAATGAATAACCGCAGTAGCCGTTCCCATAGTGTCCTGACTGTCCATGTGCATGGAAAAGATACAACTGGAGGTACTTTCCACAGTTGCCTTCATTTAGTTGACCTGGCGGGAAGTGAACGGGTGGACAAATCTGAAGTTACAGGAGACAGGCTCAAAGAGGCACAGTATATCAACAAGTCTCTTTCTTGTTTAGGAGATGTTATTACAGCCTTGGCTCAGAAGAATTCTCACATCCCTTACAGAAACAGCAAACTCACACTTTTGTTGCAAGGCTCTTTAGGTGGACATGCTAAAACTTTAATGCTTGCTCATGTGAGTCCAGAAGAAGATTCTTTCAGTGAAACGGTTAGTACCTTGAAGTTTGCTCAGAGGGTTTCCACTGTTGAACTTGGTGCTGCTTGTGCAAACAAGCAGAGTGGTGAGGTTATGCAACTCAAAGAACAGATTGAGAGCCTGAAAAAGGCATTAGCAAACAAGGAAGCTCAGAGTATACAGTTCAACAAAACCTGGGACAAACCAGGAGCAGTGACTGAGAGGACTCCTCAACGCACCAGAAGATTAAGCATTGAAAATTGCAGTACTGCAAAGACTGAGAAAGCACAGAACCCTGAAGACAGAAAGGGATCAAAAAGTCCTTTGCCAACTCGTTTAAGAAGATTGAGCTTGGAAGGCCCAAGATCTGTTAAGAAGGATGGTCTTCGGATATCACATGACGTGGGGAAATCCTCCCTACCATCTAAGGTAATGGAGGAATATGGTCAACTTCACGGTTCAGAAGCAGTCGCAAAGCCAGTTGGGCATTTCAGCAATCATGATGCCACATTGGAAGTGCATCGTACCAAAGCTCCTCGAAGTCCCACAAGCGCTTCCTATCAGAAGCAAGTGTTAGATGCTAATAGTAGAAGACCAAAAACACCTGAACCTCGTCCCAGGACTCCTCTTAGTCCAACAAGTGTTACCTATCAGAAGAGAGTGCCAGAAACAGATGGTAGAAAACAAGTTCCTCTTCCTCAGCCACCAACGACTCCTGAGTCTCATCCCAAGGCCCCTCGAAGTCCAAGGATGACCTATCAGAAGCAAGGGACACAAATTCCTGTTCTGCGGATTCCATCAACACCTGAACCTCCAAGATTTGCTACAAATGAGGTACAGCTTGTTATGGAAAGCAAGGGCAGTCTTTCAACGGGTTATGTAACACCTAATTTGACAAGTAGCACAACTGGAAAAGGATCACAGATAAGGAGATCCTTGCGGACCATTGGAAAACTGATTAATGGCTCTGAGAAGAGGAACCAGCAACCTATGATGGAAACACATTCAACAACTAAATGTGCAGGCAATTTGAATGATGAGAAATCACAGATTACTAGTAGTGCAAGAACTCTGAGGCGGCAATCATTAACAGGCATTCCAACATCAGGATCTGCCCGACGATCCTCTCTTGGAGGGAAGCCAGAAGACACTAGCATCGCGGCCATTGCTGGTTGTGTGGAGGAATTTTCCATAGAGGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005856 GO:0005871 GO:0005875 GO:0006928 GO:0007017 GO:0007018 GO:0008150 GO:0009987 GO:0015630 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0032991 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CH Kinesin Microtub_bd

Protein Analysis

944

Amino Acids

104.43

Weight (kDa)

9.17

Isoelectric Point (pI)

59.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CH	PF00307	28 - 146	1.1e-10	Calponin homology (CH) domain
Kinesin	PF00225	310 - 567	4.7e-73	Kinesin motor domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009540)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G10310 AT3G10310
fragaria_vesca	FvH4_6g24140 FvH4_6g24140 FvH4_6g24140 FvH4_6g24140 FvH4_6g24140 FvH4_6g24140 FvH4_6g24140
malus_domestica	MD12G1076000.v1.1 MD14G1074400.v1.1
prunus_persica	Prupe.7G055800_v2.0.a1
pyrus_communis	pycom14g06340
rosa_chinensis	RchiOBHm_Chr3g0483041
rosa_laevigata	RLG00000023304
rosa_multiflora	Rmu_sc0000441.1_g000128
rosa_roxburghii	Rroxscaffold_6G00398680
rosa_rugosa	Rorug03G0204100
rosa_samantha	Rh3AG251900 Rh3CG286100 Rh3DG281700
rosa_wichuraiana	Rw3G022800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	474
AarI	CACCTGC	1 cut(s)	859
AasI	GACNNNNNNGTC	1 cut(s)	2350
Acc36I	ACCTGC	1 cut(s)	859
AccB7I	CCANNNNNTGG	1 cut(s)	920
AccI	GTMKAC	1 cut(s)	1810
AccII	CGCG	1 cut(s)	2792
AccIII	TCCGGA	1 cut(s)	1194
AciI	CCGC	7 cut(s)	210, 1330, 1427, 2422, 2572, 2710, 2792
AclWI	GGATC	8 cut(s)	423, 764, 1186, 1951, 2557, 2559, 2748, 2749
AcoI	YGGCCR	2 cut(s)	1148, 2793
AcsI	RAATTY	6 cut(s)	898, 1032, 1252, 1543, 2409, 2816
AcuI	CTGAAG	5 cut(s)	78, 348, 645, 1473, 1950
AfeI	AGCGCT	1 cut(s)	2185
AfiI	CCNNNNNNNGG	6 cut(s)	139, 370, 538, 920, 1780, 2738
AgeI	ACCGGT	1 cut(s)	1205
AhdI	GACNNNNNGTC	2 cut(s)	388, 768
AhlI	ACTAGT	1 cut(s)	2687
AjiI	CACGTC	1 cut(s)	2035
AjnI	CCWGG	6 cut(s)	68, 221, 1422, 1826, 1837, 2249
AloI	GAACNNNNNNTCC	2 cut(s)	134, 166
Alw26I	GTCTC	5 cut(s)	179, 547, 1458, 1503, 2358
AlwI	GGATC	8 cut(s)	423, 764, 1186, 1951, 2557, 2559, 2748, 2749
AlwNI	CAGNNNCTG	3 cut(s)	392, 1850, 2744
Aor13HI	TCCGGA	1 cut(s)	1194
Aor51HI	AGCGCT	1 cut(s)	2185
AoxI	GGCC	4 cut(s)	1148, 1990, 2364, 2793
ApeKI	GCWGC	5 cut(s)	323, 340, 843, 1200, 1715
ApoI	RAATTY	6 cut(s)	898, 1032, 1252, 1543, 2409, 2816
AseI	ATTAAT	2 cut(s)	945, 2592
AsiGI	ACCGGT	1 cut(s)	1205
Asp700I	GAANNNNTTC	3 cut(s)	149, 520, 783
AspLEI	GCGC	1 cut(s)	2186
AspS9I	GGNCC	6 cut(s)	7, 113, 911, 1991, 2365, 2574
AsuHPI	GGTGA	5 cut(s)	840, 1220, 1301, 1306, 1751
AvaII	GGWCC	4 cut(s)	7, 113, 911, 2574
BaeGI	GKGCMC	1 cut(s)	222
BalI	TGGCCA	1 cut(s)	1150
BarI	GAAGNNNNNNTAC	2 cut(s)	1041, 1073
BbsI	GAAGAC	4 cut(s)	1938, 2009, 2230, 2784
BbvCI	CCTCAGC	1 cut(s)	2331
BbvI	GCAGC	5 cut(s)	310, 327, 855, 1187, 1702
BccI	CCATC	7 cut(s)	145, 922, 2006, 2062, 2300, 2437, 2620
BceAI	ACGGC	1 cut(s)	1323
BciT130I	CCWGG	6 cut(s)	70, 223, 1424, 1828, 1839, 2251
BciVI	GTATCC	2 cut(s)	367, 1177
BcoDI	GTCTC	5 cut(s)	179, 547, 1458, 1503, 2358
BcuI	ACTAGT	1 cut(s)	2687
BfaI	CTAG	7 cut(s)	39, 773, 875, 930, 953, 2688, 2784
BfmI	CTRYAG	2 cut(s)	393, 636
BfoI	RGCGCY	1 cut(s)	2187
BfuAI	ACCTGC	1 cut(s)	859
BfuI	GTATCC	2 cut(s)	367, 1177
BglI	GCCNNNNNGGC	1 cut(s)	2116
BglII	AGATCT	3 cut(s)	727, 1054, 1997
BisI	GCNGC	7 cut(s)	324, 341, 844, 1201, 1716, 2711, 2793
BlsI	GCNGC	7 cut(s)	325, 342, 845, 1202, 1717, 2712, 2794
BmcAI	AGTACT	3 cut(s)	293, 1312, 1900
Bme1390I	CCNGG	6 cut(s)	70, 223, 1424, 1828, 1839, 2251
Bme18I	GGWCC	4 cut(s)	7, 113, 911, 2574
BmeRI	GACNNNNNGTC	2 cut(s)	388, 768
BmgBI	CACGTC	1 cut(s)	2035
BmgT120I	GGNCC	6 cut(s)	7, 113, 911, 1991, 2365, 2574
BmiI	GGNNCC	3 cut(s)	114, 2367, 2612
BmrFI	CCNGG	6 cut(s)	70, 223, 1424, 1828, 1839, 2251
BmrI	ACTGGG	1 cut(s)	30
BmsI	GCATC	7 cut(s)	221, 724, 1222, 2125, 2161, 2200, 2796
BmuI	ACTGGG	1 cut(s)	30
BpiI	GAAGAC	4 cut(s)	1938, 2009, 2230, 2784
BplI	GAGNNNNNCTC	4 cut(s)	1455, 1487, 1846, 1878
BpmI	CTGGAG	2 cut(s)	91, 1407
Bpu10I	CCTNAGC	1 cut(s)	2331
BpuEI	CTTGAG	2 cut(s)	119, 1240
Bsa29I	ATCGAT	1 cut(s)	599
BsaI	GGTCTC	2 cut(s)	179, 547
BsaJI	CCNNGG	7 cut(s)	221, 222, 1530, 1827, 2249, 2361, 2378
BsaWI	WCCGGW	2 cut(s)	1194, 1205
BsaXI	ACNNNNNCTCC	6 cut(s)	134, 164, 800, 830, 2149, 2179
Bsc4I	CCNNNNNNNGG	6 cut(s)	139, 370, 538, 920, 1780, 2738
Bse118I	RCCGGY	1 cut(s)	1205
Bse1I	ACTGG	5 cut(s)	25, 1151, 1390, 2111, 2545
Bse3DI	GCAATG	5 cut(s)	193, 275, 463, 1326, 2796
BseAI	TCCGGA	1 cut(s)	1194
BseBI	CCWGG	6 cut(s)	70, 223, 1424, 1828, 1839, 2251
BseCI	ATCGAT	1 cut(s)	599
BseDI	CCNNGG	7 cut(s)	221, 222, 1530, 1827, 2249, 2361, 2378
BseGI	GGATG	8 cut(s)	177, 473, 613, 739, 1551, 2017, 2356, 2388
BseLI	CCNNNNNNNGG	6 cut(s)	139, 370, 538, 920, 1780, 2738
BseMI	GCAATG	5 cut(s)	193, 275, 463, 1326, 2796
BseNI	ACTGG	5 cut(s)	25, 1151, 1390, 2111, 2545
BseRI	GAGGAG	4 cut(s)	535, 1851, 2157, 2247
BseSI	GKGCMC	1 cut(s)	222
BseXI	GCAGC	5 cut(s)	310, 327, 855, 1187, 1702
BseYI	CCCAGC	1 cut(s)	532
BsgI	GTGCAG	3 cut(s)	837, 1186, 2673
Bsh1236I	CGCG	1 cut(s)	2792
Bsh1285I	CGRYCG	1 cut(s)	603
BshFI	GGCC	4 cut(s)	1150, 1992, 2366, 2795
BshTI	ACCGGT	1 cut(s)	1205
BshVI	ATCGAT	1 cut(s)	599
BsiEI	CGRYCG	1 cut(s)	603
BsiSI	CCGG	2 cut(s)	1195, 1206
BslFI	GGGAC	4 cut(s)	1844, 2160, 2232, 2416
BslI	CCNNNNNNNGG	6 cut(s)	139, 370, 538, 920, 1780, 2738
BsmAI	GTCTC	5 cut(s)	179, 547, 1458, 1503, 2358
BsmFI	GGGAC	4 cut(s)	1844, 2160, 2232, 2416
BsmI	GAATGC	5 cut(s)	502, 520, 522, 1243, 2727
BsnI	GGCC	4 cut(s)	1150, 1992, 2366, 2795
Bso31I	GGTCTC	2 cut(s)	179, 547
Bsp1286I	GDGCHC	1 cut(s)	222
Bsp13I	TCCGGA	1 cut(s)	1194
Bsp1407I	TGTACA	1 cut(s)	1063
BspACI	CCGC	7 cut(s)	210, 1330, 1427, 2422, 2572, 2710, 2792
BspANI	GGCC	4 cut(s)	1150, 1992, 2366, 2795
BspDI	ATCGAT	1 cut(s)	599
BspEI	TCCGGA	1 cut(s)	1194
BspFNI	CGCG	1 cut(s)	2792
BspHI	TCATGA	3 cut(s)	759, 1278, 2131
BspLI	GGNNCC	3 cut(s)	114, 2367, 2612
BspMAI	CTGCAG	1 cut(s)	397
BspMI	ACCTGC	1 cut(s)	859
BspPI	GGATC	8 cut(s)	423, 764, 1186, 1951, 2557, 2559, 2748, 2749
BspTNI	GGTCTC	2 cut(s)	179, 547
BsrDI	GCAATG	5 cut(s)	193, 275, 463, 1326, 2796
BsrFI	RCCGGY	1 cut(s)	1205
BsrGI	TGTACA	1 cut(s)	1063
BsrI	ACTGG	5 cut(s)	25, 1151, 1390, 2111, 2545
BssAI	RCCGGY	1 cut(s)	1205
BssECI	CCNNGG	7 cut(s)	221, 222, 1530, 1827, 2249, 2361, 2378
BssNAI	GTATAC	1 cut(s)	1811
BssT1I	CCWWGG	3 cut(s)	1530, 2361, 2378
Bst1107I	GTATAC	1 cut(s)	1811
Bst2UI	CCWGG	6 cut(s)	70, 223, 1424, 1828, 1839, 2251
Bst4CI	ACNGT	9 cut(s)	1081, 1289, 1360, 1403, 1485, 1666, 1702, 1815, 2090
Bst6I	CTCTTC	5 cut(s)	324, 974, 2282, 2331, 2600
BstAPI	GCANNNNNTGC	1 cut(s)	392
BstAUI	TGTACA	1 cut(s)	1063
BstC8I	GCNNGC	4 cut(s)	282, 345, 1626, 2656
BstENI	CCTNNNNNAGG	1 cut(s)	1778
BstF5I	GGATG	8 cut(s)	177, 473, 613, 739, 1551, 2017, 2356, 2388
BstFNI	CGCG	1 cut(s)	2792
BstH2I	RGCGCY	1 cut(s)	2187
BstHHI	GCGC	1 cut(s)	2186
BstMAI	GTCTC	5 cut(s)	179, 547, 1458, 1503, 2358
BstMCI	CGRYCG	1 cut(s)	603
BstMWI	GCNNNNNNNGC	6 cut(s)	353, 392, 1721, 1989, 2116, 2798
BstNI	CCWGG	6 cut(s)	70, 223, 1424, 1828, 1839, 2251
BstNSI	RCATGY	1 cut(s)	1610
BstSCI	CCNGG	6 cut(s)	68, 221, 1422, 1826, 1837, 2249
BstSFI	CTRYAG	2 cut(s)	393, 636
BstSLI	GKGCMC	1 cut(s)	222
BstUI	CGCG	1 cut(s)	2792
BstV1I	GCAGC	5 cut(s)	310, 327, 855, 1187, 1702
BstV2I	GAAGAC	4 cut(s)	1938, 2009, 2230, 2784
BstX2I	RGATCY	7 cut(s)	428, 727, 1054, 1191, 1997, 2564, 2741
BstXI	CCANNNNNNTGG	2 cut(s)	229, 1370
BstYI	RGATCY	7 cut(s)	428, 727, 1054, 1191, 1997, 2564, 2741
BstZ17I	GTATAC	1 cut(s)	1811
Bsu15I	ATCGAT	1 cut(s)	599
BsuI	GTATCC	2 cut(s)	367, 1177
BsuRI	GGCC	4 cut(s)	1150, 1992, 2366, 2795
BsuTUI	ATCGAT	1 cut(s)	599
BtgZI	GCGATG	1 cut(s)	2773
BtrI	CACGTC	1 cut(s)	2035
BtsCI	GGATG	8 cut(s)	177, 473, 613, 739, 1551, 2017, 2356, 2388
BtsI	GCAGTG	1 cut(s)	1851
BtsIMutI	CAGTG	6 cut(s)	222, 1254, 1260, 1663, 1698, 1851
BveI	ACCTGC	1 cut(s)	859
Cac8I	GCNNGC	4 cut(s)	282, 345, 1626, 2656
CaiI	CAGNNNCTG	3 cut(s)	392, 1850, 2744
CciI	TCATGA	3 cut(s)	759, 1278, 2131
CfoI	GCGC	1 cut(s)	2186
Cfr10I	RCCGGY	1 cut(s)	1205
Cfr13I	GGNCC	6 cut(s)	7, 113, 911, 1991, 2365, 2574
ClaI	ATCGAT	1 cut(s)	599
CseI	GACGC	1 cut(s)	392
CspAI	ACCGGT	1 cut(s)	1205
CspCI	CAANNNNNGTGG	2 cut(s)	1717, 1752
DraI	TTTAAA	1 cut(s)	1119
DrdI	GACNNNNNNGTC	1 cut(s)	2350
DriI	GACNNNNNGTC	2 cut(s)	388, 768
DseDI	GACNNNNNNGTC	1 cut(s)	2350
EaeI	YGGCCR	2 cut(s)	1148, 2793
Eam1104I	CTCTTC	5 cut(s)	324, 974, 2282, 2331, 2600
Eam1105I	GACNNNNNGTC	2 cut(s)	388, 768
EarI	CTCTTC	5 cut(s)	324, 974, 2282, 2331, 2600
Eco130I	CCWWGG	3 cut(s)	1530, 2361, 2378
Eco31I	GGTCTC	2 cut(s)	179, 547
Eco32I	GATATC	2 cut(s)	997, 2025
Eco47I	GGWCC	4 cut(s)	7, 113, 911, 2574
Eco47III	AGCGCT	1 cut(s)	2185
Eco57I	CTGAAG	5 cut(s)	78, 348, 645, 1473, 1950
EcoNI	CCTNNNNNAGG	1 cut(s)	1778
EcoO109I	RGGNCCY	1 cut(s)	2365
EcoRI	GAATTC	2 cut(s)	1252, 1543
EcoRII	CCWGG	6 cut(s)	68, 221, 1422, 1826, 1837, 2249
EcoRV	GATATC	2 cut(s)	997, 2025
EcoT14I	CCWWGG	3 cut(s)	1530, 2361, 2378
EcoT22I	ATGCAT	3 cut(s)	504, 522, 1245
ErhI	CCWWGG	3 cut(s)	1530, 2361, 2378
FalI	AAGNNNNNCTT	2 cut(s)	2310, 2342
FaqI	GGGAC	4 cut(s)	1844, 2160, 2232, 2416
FauI	CCCGC	2 cut(s)	217, 1420
FblI	GTMKAC	1 cut(s)	1810
Fnu4HI	GCNGC	7 cut(s)	324, 341, 844, 1201, 1716, 2711, 2793
FokI	GGATG	8 cut(s)	164, 480, 620, 746, 1538, 2024, 2343, 2395
Fsp4HI	GCNGC	7 cut(s)	324, 341, 844, 1201, 1716, 2711, 2793
FspBI	CTAG	7 cut(s)	39, 773, 875, 930, 953, 2688, 2784
GlaI	GCGC	1 cut(s)	2185
GluI	GCNGC	7 cut(s)	324, 341, 844, 1201, 1716, 2711, 2793
GsaI	CCCAGC	1 cut(s)	536
GsuI	CTGGAG	2 cut(s)	91, 1407
HaeII	RGCGCY	1 cut(s)	2187
HaeIII	GGCC	4 cut(s)	1150, 1992, 2366, 2795
HapII	CCGG	2 cut(s)	1195, 1206
HgaI	GACGC	1 cut(s)	392
HhaI	GCGC	1 cut(s)	2186
Hin6I	GCGC	1 cut(s)	2184
HinP1I	GCGC	1 cut(s)	2184
HincII	GTYRAC	4 cut(s)	676, 927, 1420, 2081
HindII	GTYRAC	4 cut(s)	676, 927, 1420, 2081
HpaI	GTTAAC	1 cut(s)	927
HpaII	CCGG	2 cut(s)	1195, 1206
HphI	GGTGA	5 cut(s)	840, 1220, 1301, 1306, 1751
Hpy99I	CGWCG	1 cut(s)	2754
HpyAV	CCTTC	9 cut(s)	139, 394, 713, 747, 981, 985, 1418, 1982, 2002
HpyCH4III	ACNGT	9 cut(s)	1081, 1289, 1360, 1403, 1485, 1666, 1702, 1815, 2090
HpyCH4IV	ACGT	3 cut(s)	815, 1153, 2034
HpyF10VI	GCNNNNNNNGC	6 cut(s)	353, 392, 1721, 1989, 2116, 2798
HpySE526I	ACGT	3 cut(s)	815, 1153, 2034
HspAI	GCGC	1 cut(s)	2184
Kpn2I	TCCGGA	1 cut(s)	1194
KspAI	GTTAAC	1 cut(s)	927
LmnI	GCTCC	3 cut(s)	1197, 1841, 2170
Lsp1109I	GCAGC	5 cut(s)	310, 327, 855, 1187, 1702
LweI	GCATC	7 cut(s)	221, 724, 1222, 2125, 2161, 2200, 2796
MaeI	CTAG	7 cut(s)	39, 773, 875, 930, 953, 2688, 2784
MaeII	ACGT	3 cut(s)	815, 1153, 2034
MaeIII	GTNAC	5 cut(s)	795, 1456, 1846, 2275, 2512
MflI	RGATCY	7 cut(s)	428, 727, 1054, 1191, 1997, 2564, 2741
MhlI	GDGCHC	1 cut(s)	222
MlsI	TGGCCA	1 cut(s)	1150
MluNI	TGGCCA	1 cut(s)	1150
MlyI	GAGTC	5 cut(s)	1645, 1852, 2248, 2338, 2360
MmeI	TCCRAC	3 cut(s)	786, 2291, 2756
Mox20I	TGGCCA	1 cut(s)	1150
Mph1103I	ATGCAT	3 cut(s)	504, 522, 1245
MroI	TCCGGA	1 cut(s)	1194
MroXI	GAANNNNTTC	3 cut(s)	149, 520, 783
MscI	TGGCCA	1 cut(s)	1150
MslI	CAYNNNNRTG	1 cut(s)	1368
Msp20I	TGGCCA	1 cut(s)	1150
MspI	CCGG	2 cut(s)	1195, 1206
MspR9I	CCNGG	6 cut(s)	70, 223, 1424, 1828, 1839, 2251
Mva1269I	GAATGC	5 cut(s)	502, 520, 522, 1243, 2727
MvaI	CCWGG	6 cut(s)	70, 223, 1424, 1828, 1839, 2251
MvnI	CGCG	1 cut(s)	2792
MwoI	GCNNNNNNNGC	6 cut(s)	353, 392, 1721, 1989, 2116, 2798
NlaIV	GGNNCC	3 cut(s)	114, 2367, 2612
NmuCI	GTSAC	1 cut(s)	1846
NsiI	ATGCAT	3 cut(s)	504, 522, 1245
NspI	RCATGY	1 cut(s)	1610
PagI	TCATGA	3 cut(s)	759, 1278, 2131
PaqCI	CACCTGC	1 cut(s)	859
PasI	CCCWGGG	1 cut(s)	222
PctI	GAATGC	5 cut(s)	502, 520, 522, 1243, 2727
PdmI	GAANNNNTTC	3 cut(s)	149, 520, 783
PflMI	CCANNNNNTGG	1 cut(s)	920
PinAI	ACCGGT	1 cut(s)	1205
PkrI	GCNGC	7 cut(s)	325, 342, 845, 1202, 1717, 2712, 2794
Ple19I	CGATCG	1 cut(s)	603
PleI	GAGTC	5 cut(s)	1644, 1852, 2248, 2338, 2359
PpsI	GAGTC	5 cut(s)	1644, 1852, 2248, 2338, 2359
PshBI	ATTAAT	2 cut(s)	945, 2592
PsiI	TTATAA	1 cut(s)	474
Psp6I	CCWGG	6 cut(s)	68, 221, 1422, 1826, 1837, 2249
PspFI	CCCAGC	1 cut(s)	532
PspGI	CCWGG	6 cut(s)	68, 221, 1422, 1826, 1837, 2249
PspN4I	GGNNCC	3 cut(s)	114, 2367, 2612
PspPI	GGNCC	6 cut(s)	7, 113, 911, 1991, 2365, 2574
PstI	CTGCAG	1 cut(s)	397
PstNI	CAGNNNCTG	3 cut(s)	392, 1850, 2744
PsuI	RGATCY	7 cut(s)	428, 727, 1054, 1191, 1997, 2564, 2741
PvuI	CGATCG	1 cut(s)	603
RseI	CAYNNNNRTG	1 cut(s)	1368
SatI	GCNGC	7 cut(s)	324, 341, 844, 1201, 1716, 2711, 2793
Sau96I	GGNCC	6 cut(s)	7, 113, 911, 1991, 2365, 2574
ScaI	AGTACT	3 cut(s)	293, 1312, 1900
SchI	GAGTC	5 cut(s)	1645, 1852, 2248, 2338, 2360
ScrFI	CCNGG	6 cut(s)	70, 223, 1424, 1828, 1839, 2251
SduI	GDGCHC	1 cut(s)	222
SfaNI	GCATC	7 cut(s)	221, 724, 1222, 2125, 2161, 2200, 2796
SfcI	CTRYAG	2 cut(s)	393, 636
SgrAI	CRCCGGYG	1 cut(s)	1205
SinI	GGWCC	4 cut(s)	7, 113, 911, 2574
SmiMI	CAYNNNNRTG	1 cut(s)	1368
SmlI	CTYRAG	2 cut(s)	98, 1219
SmoI	CTYRAG	2 cut(s)	98, 1219
SpeI	ACTAGT	1 cut(s)	2687
SsiI	CCGC	7 cut(s)	210, 1330, 1427, 2422, 2572, 2710, 2792
SspMI	CTAG	7 cut(s)	39, 773, 875, 930, 953, 2688, 2784
StyD4I	CCNGG	6 cut(s)	68, 221, 1422, 1826, 1837, 2249
StyI	CCWWGG	3 cut(s)	1530, 2361, 2378
TaaI	ACNGT	9 cut(s)	1081, 1289, 1360, 1403, 1485, 1666, 1702, 1815, 2090
TaiI	ACGT	3 cut(s)	818, 1156, 2037
TaqI	TCGA	5 cut(s)	599, 603, 1300, 2170, 2371
TaqII	GACCGA	1 cut(s)	24
TatI	WGTACW	5 cut(s)	291, 1063, 1076, 1310, 1898
TauI	GCSGC	2 cut(s)	2713, 2795
TscAI	CASTG	6 cut(s)	222, 1254, 1267, 1663, 1705, 1851
TseFI	GTSAC	1 cut(s)	1846
TseI	GCWGC	5 cut(s)	323, 340, 843, 1200, 1715
Tsp45I	GTSAC	1 cut(s)	1846
TspDTI	ATGAA	9 cut(s)	142, 1004, 1056, 1062, 1084, 1146, 1295, 1337, 1400
TspGWI	ACGGA	2 cut(s)	631, 738
TspRI	CASTG	6 cut(s)	222, 1254, 1267, 1663, 1705, 1851
Van91I	CCANNNNNTGG	1 cut(s)	920
VpaK11BI	GGWCC	4 cut(s)	7, 113, 911, 2574
VspI	ATTAAT	2 cut(s)	945, 2592
XagI	CCTNNNNNAGG	1 cut(s)	1778
XapI	RAATTY	6 cut(s)	898, 1032, 1252, 1543, 2409, 2816
XbaI	TCTAGA	2 cut(s)	772, 874
XceI	RCATGY	1 cut(s)	1610
XmiI	GTMKAC	1 cut(s)	1810
XmnI	GAANNNNTTC	3 cut(s)	149, 520, 783
XspI	CTAG	7 cut(s)	39, 773, 875, 930, 953, 2688, 2784
ZrmI	AGTACT	3 cut(s)	293, 1312, 1900
Zsp2I	ATGCAT	3 cut(s)	504, 522, 1245

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.