Rroxscaffold_6G00398680
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
Physical Location & Seq
Reverse (-)
20567245 .. 20575600
8356 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00398680.1

Sequence Viewer

Length: 3399 bp
ATGGAGGACCGATCAAGAACTGGGTTGCACGATTTTACTAGGGCTTCAAGAAAGGCTGAAGAATCAGCCTGGAGGCGATTTCAAGCAGTTGAGTGGCTTGAAAGCTTTGTGGGTCCACTTGGCATGCCGAACCAGCCATCGGAGAAAGAGTTCATTTCTTGCCTGAGAAATGGTCTCATTCTATGCAATGCCATAAACAAGATTCAACCCGGATCAGTGCCCAGGGTGGTGGAGAGCCAAATGCCTTTACAATCACTAAGTAGGGAATCTCAACCATTGCCTGCATATCAGTACTTTGAGAATGTCCGAAACTTTCTGGTTGCTGCTGAAGAGTTAAAGCTGCCTGCTTTTGAAGCCTCTGACCTTGAAAGGGATACATTGGAGGCAGGGTCAGCAGGGAAGGTCGTTGATTGTGTTTTAGCCCTTAGATCCTATAATGAGTGGAAGCAGATGAGCAATGGGAATGGATGTTATAAACATATAAAATCTCCCTTAGTTATGCATTCTGCCAATAGAATGCATTCAAGACCCCCAGCTATGGTCTCCTCGCACTCTTGCAGGAACTTGGATATGTCTGCTGGACTTGATAGACAACTATCGATCGAGGATGACAAACGGAAACCTGAAGTGGATTCTATAGAATCTGTTGTCAAGTTAATTGCTACTTCTATGGTTGACATAAAGGAAAACATTGATGATAACCTTCTTGCTTCCTACCATAACGGAGATCTGGATGCTGTTAGTGTCTTTAGAAGGATCATGACAAGTTGTCTAGAGGAACATTTTCAAAAGAAGTTACCTGAGTTGGAGTGTACGTTAAAAGAATCCTCCAAAGGAAGAAGCAGCTCACCTGCACATTCAACATCTATTCCTCTAGAGGATATATCTGCCGTTGAAAATTCAAGATGCTGCAAAGCTTGTTTGAGAAAGGGTAACTGCAACCACCGGCTTCTATTTCAAATGCAAGAGAAAGAACTAGTGGATCTAAAGGCATTGTGGTTAAGTGCAAAAACAGAGTTCGAAGACCTACAATCCCAGCTGCACAGTGATTTGAAAGACTTGGGGACACAGGTACAAGAGCTGTCTACTGCTGCTCTTGGCTATCATAAGGTGGTGCAAGAGAATAGAAAACTGTACAACATGGTTCAGGATTTGAAAGGTAATATTAGAGTCTACTGCAGGATTAGGCCGTCCTTCAATTGTGAATCCAAAAACATTATAGATTTCATTGGAGGGGATGGATCACTTGTGATCTTGGACCCTGCAAAGCCCCAAAAGGATGGAAGGAAAGTTTTTCAGTTCAATCAAGTGTTTGGTCCAGCTGCTACCCAAGATGAGGTTTTCAAGGACACTCAACCTTTGATCAGGTCTGTGATGGATGGCTACAATGTATGCATATTTGCTTATGGTCAAACTGGATCAGGCAAAACACATACCATGAGTGGTCCATCTGGTGGGTTAACTAGCGACATGGGGATTAATTATCTAGCTCTCAACGATCTCTTCCAGATGTCAAAAAGAAGGAAGGATATCATACATTATGACATTCATGTTCAAATGGTTGAAATTTACAATGAACAAGTACGAGATCTTCTTGTACAAGATTCATCTACTGTCAAATATCCTTTCATATTGGTTATTTATCTTACTTTAAACATTTATTTTATTGGAAAGAAAAACTGGCCACGTTCATTTTGTGTATCCTTAACAATTCACAAATTAGAGATCCGGAGCTGCACCGGTGATAATGGCTTGAGTATTCCAGATGCTACAATGCATTCAGTAAATTCAACCACTGATGTTCTTAACCTCATGAAATACGGTGAGGTGAATCGAGTTGTCAGTACTACTGCAATGAATAACCGCAGTAGCCGTTCCCATAGTGTCCTGACTGTCCATGTGCATGGAAAAGATACAACTGGAGGTACTTTCCACAGTTGCCTTCATTTAGTTGACCTCGCAGGAAGTGAACGGGTGGACAAATCTGAAGTTACAGGAGACAGGCTCAAAGAGGCACAGTATATCAACAAGTCTCTTTCTTGTTTAGGAGATGTTATTACAGCCTTGGCTCAGAAGAATTCCCACATCCCTTACAGAAACAGCAAACTCACACTTTTGTTGCAAGGCTCCTTAGGTGGACATGCTAAAACTTTAATGCTCGCTCATGTGAGTCCAGAAGAAGATGCTTTCAGTGAAACGGTTAGTACCTTGAAGTTTGCTCAGAGGGTTTCCACTGTTGAACTTGGTGCTGCTCGTGCAAACAAGCAGAGTGGTGAGGTTATGCAACTCAAAGAACAGATTGAGAGCCTGAAAAAGGCATTAGCAAACAAGGATTCTCAGAGTATACAGTTCAACAAAACCTGGGACAAACCAGGAGCAGTGACTGAGAGGACTCCTCAACGCACCAGAAGATTAAGCATTGAAAACAGCAGTACTGCAAAGACTGAGAAAGCACAGAACCCTGAAGACAGAAAGGGATCAAAAAGTCCTTTGCCAACTCGTTTAAGAAGATTGAGCTTGGAAGGCCCAAGATCTGTTAAGAAGGATGGTCTTCGGATATCACATGACGTGGGGAAATCCTCCCTACCATCTAAGGTAATGGAGGAATATGATCAACTTCACGGTCCAGAAGCAGTCGCAAAGCCAGTTGGGCATTTCAGCAATCATGATGCCACATTGGAAGTGCATCGTACCAAAGCTCCTCGAAGTCCCACAAGCGCTTCCTATCAGAAGCAAGTGTTAGATGCTAATAGTAGAAGACCAAAAACACCTGAACCTCATCCCAGGACTCCTCTTAGTCCAACAAGTGTTGCCTATCAGAAGAGAGTGCCAGAAACAGATGGTAGAAAACAAGTTCCTCTTCCTCAGCCACCAACGACTCCTGAGTCTCATCCCAAGGCCCCTCGAAGTCCAAGGATGACTACCTATCAGAAGCAAGGGACACAAATTCCTTGTCTGCGGATTCCATCAACACCTGAACCACCAAGATTTGCTACAAATGAGGTACAGCTTGTTATGGAAAGCAAGGGCAGTCTTTCAACTGGTTATGTAACACCTAATTTGACAAGTAGCACAACTGGAAAAGGATCACAGATAAGGAGATCCTTGCGGACCATTGGAAAACTGATTAATGGCTCTGAGAAGAGGAACCAGCAACCTATGATGGAAACACATTCAACTACTAAATGTGCAGGCAATTTGAATAATGAGAAATCACAGATTACTACTAGTAGTGCAAGAACTCTGAGGCGGCAATCATTAACAGGCATTCCAACATCAGGATCTGCTCGACGATCCTCTCTTGGAGGGAAGCCAGAAGACACTAGTGTAAATGACAAGAGAGCCAAAACACCTCCACCTGTCTGCTCGTCAACGAAAAATAACAAGCGGTGGCTTTAG

Protein Analysis

1132

Amino Acids

125.97

Weight (kDa)

9.29

Isoelectric Point (pI)

56.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CH PF00307 28 - 146 5.5e-11 Calponin homology (CH) domain
Microtub_bd PF16796 373 - 532 1.9e-42 Microtubule binding
Kinesin PF00225 422 - 745 4.7e-102 Kinesin motor domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 474
AarI CACCTGC 1 cut(s) 859
AasI GACNNNNNNGTC 1 cut(s) 2884
Acc36I ACCTGC 1 cut(s) 859
AccB7I CCANNNNNTGG 1 cut(s) 1454
AccI GTMKAC 3 cut(s) 1085, 1173, 2344
AccIII TCCGGA 1 cut(s) 1728
AciI CCGC 5 cut(s) 1864, 2959, 3109, 3250, 3388
AcoI YGGCCR 1 cut(s) 1682
AcsI RAATTY 5 cut(s) 898, 1566, 1786, 2077, 2946
AcuI CTGAAG 5 cut(s) 78, 348, 645, 2007, 2484
AfeI AGCGCT 1 cut(s) 2719
AfiI CCNNNNNNNGG 7 cut(s) 139, 370, 538, 1336, 1454, 2314, 3278
AgeI ACCGGT 1 cut(s) 1739
AhdI GACNNNNNGTC 1 cut(s) 768
AhlI ACTAGT 3 cut(s) 976, 3227, 3323
AjiI CACGTC 1 cut(s) 2569
AjnI CCWGG 5 cut(s) 68, 221, 2360, 2371, 2783
AloI GAACNNNNNNTCC 2 cut(s) 134, 166
Alw26I GTCTC 5 cut(s) 179, 547, 1992, 2037, 2892
AlwNI CAGNNNCTG 2 cut(s) 2384, 3284
Aor13HI TCCGGA 1 cut(s) 1728
Aor51HI AGCGCT 1 cut(s) 2719
AoxI GGCC 4 cut(s) 1187, 1682, 2524, 2898
ApeKI GCWGC 9 cut(s) 323, 340, 843, 909, 1039, 1091, 1322, 1734, 2249
ApoI RAATTY 5 cut(s) 898, 1566, 1786, 2077, 2946
ArsI GACNNNNNNTTYG 2 cut(s) 2938, 2970
AseI ATTAAT 2 cut(s) 1479, 3129
AsiGI ACCGGT 1 cut(s) 1739
Asp700I GAANNNNTTC 3 cut(s) 149, 520, 783
AspLEI GCGC 1 cut(s) 2720
AspS9I GGNCC 9 cut(s) 7, 113, 1258, 1316, 1445, 2525, 2624, 2899, 3111
AsuC2I CCSGG 1 cut(s) 210
AsuHPI GGTGA 5 cut(s) 840, 1754, 1835, 1840, 2285
AsuII TTCGAA 1 cut(s) 1020
AvaII GGWCC 7 cut(s) 7, 113, 1258, 1316, 1445, 2624, 3111
AxyI CCTNAGG 1 cut(s) 2131
BaeGI GKGCMC 1 cut(s) 222
BalI TGGCCA 1 cut(s) 1684
BarI GAAGNNNNNNTAC 2 cut(s) 1575, 1607
BauI CACGAG 1 cut(s) 2253
BbsI GAAGAC 5 cut(s) 1029, 2472, 2543, 2764, 3324
BbvCI CCTCAGC 1 cut(s) 2865
BbvI GCAGC 9 cut(s) 310, 327, 855, 896, 1026, 1078, 1309, 1721, 2236
BceAI ACGGC 3 cut(s) 875, 1174, 1857
BciT130I CCWGG 5 cut(s) 70, 223, 2362, 2373, 2785
BciVI GTATCC 2 cut(s) 367, 1711
BclI TGATCA 2 cut(s) 1362, 2611
BcnI CCSGG 1 cut(s) 210
BcoDI GTCTC 5 cut(s) 179, 547, 1992, 2037, 2892
BcuI ACTAGT 3 cut(s) 976, 3227, 3323
BfaI CTAG 8 cut(s) 39, 773, 875, 977, 1464, 1487, 3228, 3324
BfmI CTRYAG 2 cut(s) 636, 1177
BfoI RGCGCY 1 cut(s) 2721
BfuAI ACCTGC 1 cut(s) 859
BfuI GTATCC 2 cut(s) 367, 1711
BglI GCCNNNNNGGC 1 cut(s) 2650
BglII AGATCT 3 cut(s) 727, 1588, 2531
BmcAI AGTACT 3 cut(s) 293, 1846, 2434
Bme1390I CCNGG 6 cut(s) 70, 210, 223, 2362, 2373, 2785
Bme18I GGWCC 7 cut(s) 7, 113, 1258, 1316, 1445, 2624, 3111
BmeRI GACNNNNNGTC 1 cut(s) 768
BmgBI CACGTC 1 cut(s) 2569
BmgT120I GGNCC 9 cut(s) 7, 113, 1258, 1316, 1445, 2525, 2624, 2899, 3111
BmiI GGNNCC 5 cut(s) 114, 1260, 2128, 2901, 3149
BmrFI CCNGG 6 cut(s) 70, 210, 223, 2362, 2373, 2785
BmrI ACTGGG 1 cut(s) 30
BmsI GCATC 7 cut(s) 724, 896, 1756, 2173, 2659, 2695, 2734
BmuI ACTGGG 1 cut(s) 30
BpiI GAAGAC 5 cut(s) 1029, 2472, 2543, 2764, 3324
BplI GAGNNNNNCTC 4 cut(s) 1989, 2021, 2380, 2412
BpmI CTGGAG 2 cut(s) 91, 1941
Bpu10I CCTNAGC 1 cut(s) 2865
Bpu14I TTCGAA 1 cut(s) 1020
BpuEI CTTGAG 1 cut(s) 1774
BpuMI CCSGG 1 cut(s) 210
Bsa29I ATCGAT 1 cut(s) 599
BsaI GGTCTC 2 cut(s) 179, 547
BsaJI CCNNGG 7 cut(s) 221, 222, 2064, 2361, 2783, 2895, 2912
BsaWI WCCGGW 2 cut(s) 1728, 1739
BsaXI ACNNNNNCTCC 8 cut(s) 134, 164, 374, 404, 800, 830, 2683, 2713
Bsc4I CCNNNNNNNGG 7 cut(s) 139, 370, 538, 1336, 1454, 2314, 3278
Bse118I RCCGGY 2 cut(s) 945, 1739
Bse1I ACTGG 7 cut(s) 25, 1420, 1685, 1924, 2645, 3046, 3082
Bse21I CCTNAGG 1 cut(s) 2131
Bse3DI GCAATG 4 cut(s) 193, 275, 463, 1860
BseAI TCCGGA 1 cut(s) 1728
BseBI CCWGG 5 cut(s) 70, 223, 2362, 2373, 2785
BseCI ATCGAT 1 cut(s) 599
BseDI CCNNGG 7 cut(s) 221, 222, 2064, 2361, 2783, 2895, 2912
BseLI CCNNNNNNNGG 7 cut(s) 139, 370, 538, 1336, 1454, 2314, 3278
BseMI GCAATG 4 cut(s) 193, 275, 463, 1860
BseNI ACTGG 7 cut(s) 25, 1420, 1685, 1924, 2645, 3046, 3082
BseRI GAGGAG 4 cut(s) 535, 2385, 2691, 2781
BseSI GKGCMC 1 cut(s) 222
BseXI GCAGC 9 cut(s) 310, 327, 855, 896, 1026, 1078, 1309, 1721, 2236
BseYI CCCAGC 2 cut(s) 532, 1035
BsgI GTGCAG 4 cut(s) 837, 1025, 1720, 3210
Bsh1285I CGRYCG 1 cut(s) 603
BshFI GGCC 4 cut(s) 1189, 1684, 2526, 2900
BshTI ACCGGT 1 cut(s) 1739
BshVI ATCGAT 1 cut(s) 599
BsiEI CGRYCG 1 cut(s) 603
BsiSI CCGG 4 cut(s) 210, 946, 1729, 1740
BslFI GGGAC 4 cut(s) 1078, 2378, 2694, 2953
BslI CCNNNNNNNGG 7 cut(s) 139, 370, 538, 1336, 1454, 2314, 3278
BsmAI GTCTC 5 cut(s) 179, 547, 1992, 2037, 2892
BsmFI GGGAC 4 cut(s) 1078, 2378, 2694, 2953
BsmI GAATGC 5 cut(s) 502, 520, 522, 1777, 3267
BsnI GGCC 4 cut(s) 1189, 1684, 2526, 2900
Bso31I GGTCTC 2 cut(s) 179, 547
Bsp119I TTCGAA 1 cut(s) 1020
Bsp1286I GDGCHC 1 cut(s) 222
Bsp13I TCCGGA 1 cut(s) 1728
Bsp1407I TGTACA 2 cut(s) 1134, 1597
BspACI CCGC 5 cut(s) 1864, 2959, 3109, 3250, 3388
BspANI GGCC 4 cut(s) 1189, 1684, 2526, 2900
BspDI ATCGAT 1 cut(s) 599
BspEI TCCGGA 1 cut(s) 1728
BspHI TCATGA 3 cut(s) 759, 1812, 2665
BspLI GGNNCC 5 cut(s) 114, 1260, 2128, 2901, 3149
BspMAI CTGCAG 1 cut(s) 1181
BspMI ACCTGC 1 cut(s) 859
BspT104I TTCGAA 1 cut(s) 1020
BspTNI GGTCTC 2 cut(s) 179, 547
BsrDI GCAATG 4 cut(s) 193, 275, 463, 1860
BsrFI RCCGGY 2 cut(s) 945, 1739
BsrGI TGTACA 2 cut(s) 1134, 1597
BsrI ACTGG 7 cut(s) 25, 1420, 1685, 1924, 2645, 3046, 3082
BssAI RCCGGY 2 cut(s) 945, 1739
BssECI CCNNGG 7 cut(s) 221, 222, 2064, 2361, 2783, 2895, 2912
BssNAI GTATAC 1 cut(s) 2345
BssSI CACGAG 1 cut(s) 2253
BssT1I CCWWGG 3 cut(s) 2064, 2895, 2912
Bst1107I GTATAC 1 cut(s) 2345
Bst2BI CACGAG 1 cut(s) 2253
Bst2UI CCWGG 5 cut(s) 70, 223, 2362, 2373, 2785
Bst6I CTCTTC 5 cut(s) 324, 1508, 2816, 2865, 3137
BstAUI TGTACA 2 cut(s) 1134, 1597
BstBI TTCGAA 1 cut(s) 1020
BstC8I GCNNGC 5 cut(s) 125, 282, 345, 2160, 3193
BstENI CCTNNNNNAGG 1 cut(s) 2312
BstH2I RGCGCY 1 cut(s) 2721
BstHHI GCGC 1 cut(s) 2720
BstMAI GTCTC 5 cut(s) 179, 547, 1992, 2037, 2892
BstMCI CGRYCG 1 cut(s) 603
BstMWI GCNNNNNNNGC 6 cut(s) 133, 353, 392, 2255, 2523, 2650
BstNI CCWGG 5 cut(s) 70, 223, 2362, 2373, 2785
BstNSI RCATGY 2 cut(s) 127, 2144
BstSCI CCNGG 6 cut(s) 68, 208, 221, 2360, 2371, 2783
BstSFI CTRYAG 2 cut(s) 636, 1177
BstSLI GKGCMC 1 cut(s) 222
BstV1I GCAGC 9 cut(s) 310, 327, 855, 896, 1026, 1078, 1309, 1721, 2236
BstV2I GAAGAC 5 cut(s) 1029, 2472, 2543, 2764, 3324
BstX2I RGATCY 8 cut(s) 428, 727, 982, 1588, 1725, 2531, 3101, 3281
BstXI CCANNNNNNTGG 3 cut(s) 229, 1280, 1904
BstYI RGATCY 8 cut(s) 428, 727, 982, 1588, 1725, 2531, 3101, 3281
BstZ17I GTATAC 1 cut(s) 2345
Bsu15I ATCGAT 1 cut(s) 599
Bsu36I CCTNAGG 1 cut(s) 2131
BsuI GTATCC 2 cut(s) 367, 1711
BsuRI GGCC 4 cut(s) 1189, 1684, 2526, 2900
BsuTUI ATCGAT 1 cut(s) 599
BtrI CACGTC 1 cut(s) 2569
BtsI GCAGTG 1 cut(s) 2385
BtsIMutI CAGTG 6 cut(s) 222, 1051, 1794, 2197, 2232, 2385
BveI ACCTGC 1 cut(s) 859
Cac8I GCNNGC 5 cut(s) 125, 282, 345, 2160, 3193
CaiI CAGNNNCTG 2 cut(s) 2384, 3284
CciI TCATGA 3 cut(s) 759, 1812, 2665
CfoI GCGC 1 cut(s) 2720
Cfr10I RCCGGY 2 cut(s) 945, 1739
Cfr13I GGNCC 9 cut(s) 7, 113, 1258, 1316, 1445, 2525, 2624, 2899, 3111
ClaI ATCGAT 1 cut(s) 599
CspAI ACCGGT 1 cut(s) 1739
CspCI CAANNNNNGTGG 2 cut(s) 2251, 2286
DraI TTTAAA 1 cut(s) 1653
DrdI GACNNNNNNGTC 1 cut(s) 2884
DriI GACNNNNNGTC 1 cut(s) 768
DseDI GACNNNNNNGTC 1 cut(s) 2884
EaeI YGGCCR 1 cut(s) 1682
Eam1104I CTCTTC 5 cut(s) 324, 1508, 2816, 2865, 3137
Eam1105I GACNNNNNGTC 1 cut(s) 768
EarI CTCTTC 5 cut(s) 324, 1508, 2816, 2865, 3137
Eco130I CCWWGG 3 cut(s) 2064, 2895, 2912
Eco31I GGTCTC 2 cut(s) 179, 547
Eco32I GATATC 2 cut(s) 1531, 2559
Eco47I GGWCC 7 cut(s) 7, 113, 1258, 1316, 1445, 2624, 3111
Eco47III AGCGCT 1 cut(s) 2719
Eco57I CTGAAG 5 cut(s) 78, 348, 645, 2007, 2484
Eco81I CCTNAGG 1 cut(s) 2131
EcoNI CCTNNNNNAGG 1 cut(s) 2312
EcoO109I RGGNCCY 1 cut(s) 2899
EcoRI GAATTC 1 cut(s) 2077
EcoRII CCWGG 5 cut(s) 68, 221, 2360, 2371, 2783
EcoRV GATATC 2 cut(s) 1531, 2559
EcoT14I CCWWGG 3 cut(s) 2064, 2895, 2912
EcoT22I ATGCAT 4 cut(s) 504, 522, 1397, 1779
ErhI CCWWGG 3 cut(s) 2064, 2895, 2912
FalI AAGNNNNNCTT 2 cut(s) 2844, 2876
FaqI GGGAC 4 cut(s) 1078, 2378, 2694, 2953
FbaI TGATCA 2 cut(s) 1362, 2611
FblI GTMKAC 3 cut(s) 1085, 1173, 2344
FspBI CTAG 8 cut(s) 39, 773, 875, 977, 1464, 1487, 3228, 3324
GlaI GCGC 1 cut(s) 2719
GsaI CCCAGC 2 cut(s) 536, 1039
GsuI CTGGAG 2 cut(s) 91, 1941
HaeII RGCGCY 1 cut(s) 2721
HaeIII GGCC 4 cut(s) 1189, 1684, 2526, 2900
HapII CCGG 4 cut(s) 210, 946, 1729, 1740
HhaI GCGC 1 cut(s) 2720
Hin6I GCGC 1 cut(s) 2718
HinP1I GCGC 1 cut(s) 2718
HincII GTYRAC 4 cut(s) 676, 1461, 1954, 3372
HindII GTYRAC 4 cut(s) 676, 1461, 1954, 3372
HindIII AAGCTT 2 cut(s) 103, 915
HpaI GTTAAC 1 cut(s) 1461
HpaII CCGG 4 cut(s) 210, 946, 1729, 1740
HphI GGTGA 5 cut(s) 840, 1754, 1835, 1840, 2285
Hpy99I CGWCG 1 cut(s) 3294
HpyCH4IV ACGT 3 cut(s) 815, 1687, 2568
HpyF10VI GCNNNNNNNGC 6 cut(s) 133, 353, 392, 2255, 2523, 2650
HpySE526I ACGT 3 cut(s) 815, 1687, 2568
HspAI GCGC 1 cut(s) 2718
Kpn2I TCCGGA 1 cut(s) 1728
Ksp22I TGATCA 2 cut(s) 1362, 2611
KspAI GTTAAC 1 cut(s) 1461
LmnI GCTCC 4 cut(s) 1731, 2132, 2375, 2704
Lsp1109I GCAGC 9 cut(s) 310, 327, 855, 896, 1026, 1078, 1309, 1721, 2236
LweI GCATC 7 cut(s) 724, 896, 1756, 2173, 2659, 2695, 2734
MaeI CTAG 8 cut(s) 39, 773, 875, 977, 1464, 1487, 3228, 3324
MaeII ACGT 3 cut(s) 815, 1687, 2568
MaeIII GTNAC 5 cut(s) 795, 932, 1990, 2380, 3049
MfeI CAATTG 1 cut(s) 1198
MflI RGATCY 8 cut(s) 428, 727, 982, 1588, 1725, 2531, 3101, 3281
MhlI GDGCHC 1 cut(s) 222
MlsI TGGCCA 1 cut(s) 1684
MluNI TGGCCA 1 cut(s) 1684
MlyI GAGTC 6 cut(s) 1179, 2179, 2386, 2782, 2872, 2894
MmeI TCCRAC 3 cut(s) 786, 2825, 3296
Mox20I TGGCCA 1 cut(s) 1684
Mph1103I ATGCAT 4 cut(s) 504, 522, 1397, 1779
MroI TCCGGA 1 cut(s) 1728
MroXI GAANNNNTTC 3 cut(s) 149, 520, 783
MscI TGGCCA 1 cut(s) 1684
MslI CAYNNNNRTG 1 cut(s) 1902
Msp20I TGGCCA 1 cut(s) 1684
MspA1I CMGCKG 2 cut(s) 1039, 1322
MspI CCGG 4 cut(s) 210, 946, 1729, 1740
MspR9I CCNGG 6 cut(s) 70, 210, 223, 2362, 2373, 2785
MunI CAATTG 1 cut(s) 1198
Mva1269I GAATGC 5 cut(s) 502, 520, 522, 1777, 3267
MvaI CCWGG 5 cut(s) 70, 223, 2362, 2373, 2785
MwoI GCNNNNNNNGC 6 cut(s) 133, 353, 392, 2255, 2523, 2650
NciI CCSGG 1 cut(s) 210
NlaIV GGNNCC 5 cut(s) 114, 1260, 2128, 2901, 3149
NmuCI GTSAC 1 cut(s) 2380
NsiI ATGCAT 4 cut(s) 504, 522, 1397, 1779
NspI RCATGY 2 cut(s) 127, 2144
NspV TTCGAA 1 cut(s) 1020
PaeI GCATGC 1 cut(s) 127
PagI TCATGA 3 cut(s) 759, 1812, 2665
PaqCI CACCTGC 1 cut(s) 859
PasI CCCWGGG 1 cut(s) 222
PctI GAATGC 5 cut(s) 502, 520, 522, 1777, 3267
PdmI GAANNNNTTC 3 cut(s) 149, 520, 783
PflMI CCANNNNNTGG 1 cut(s) 1454
PinAI ACCGGT 1 cut(s) 1739
Ple19I CGATCG 1 cut(s) 603
PleI GAGTC 6 cut(s) 1178, 2178, 2386, 2782, 2872, 2893
PpsI GAGTC 6 cut(s) 1178, 2178, 2386, 2782, 2872, 2893
PshBI ATTAAT 2 cut(s) 1479, 3129
PsiI TTATAA 1 cut(s) 474
Psp6I CCWGG 5 cut(s) 68, 221, 2360, 2371, 2783
PspFI CCCAGC 2 cut(s) 532, 1035
PspGI CCWGG 5 cut(s) 68, 221, 2360, 2371, 2783
PspN4I GGNNCC 5 cut(s) 114, 1260, 2128, 2901, 3149
PspPI GGNCC 9 cut(s) 7, 113, 1258, 1316, 1445, 2525, 2624, 2899, 3111
PstI CTGCAG 1 cut(s) 1181
PstNI CAGNNNCTG 2 cut(s) 2384, 3284
PsuI RGATCY 8 cut(s) 428, 727, 982, 1588, 1725, 2531, 3101, 3281
PvuI CGATCG 1 cut(s) 603
PvuII CAGCTG 2 cut(s) 1039, 1322
RseI CAYNNNNRTG 1 cut(s) 1902
Sau96I GGNCC 9 cut(s) 7, 113, 1258, 1316, 1445, 2525, 2624, 2899, 3111
ScaI AGTACT 3 cut(s) 293, 1846, 2434
SchI GAGTC 6 cut(s) 1179, 2179, 2386, 2782, 2872, 2894
ScrFI CCNGG 6 cut(s) 70, 210, 223, 2362, 2373, 2785
SduI GDGCHC 1 cut(s) 222
SfaNI GCATC 7 cut(s) 724, 896, 1756, 2173, 2659, 2695, 2734
SfcI CTRYAG 2 cut(s) 636, 1177
SfuI TTCGAA 1 cut(s) 1020
SgrAI CRCCGGYG 1 cut(s) 1739
SinI GGWCC 7 cut(s) 7, 113, 1258, 1316, 1445, 2624, 3111
SmiMI CAYNNNNRTG 1 cut(s) 1902
SmlI CTYRAG 1 cut(s) 1753
SmoI CTYRAG 1 cut(s) 1753
SpeI ACTAGT 3 cut(s) 976, 3227, 3323
SphI GCATGC 1 cut(s) 127
SsiI CCGC 5 cut(s) 1864, 2959, 3109, 3250, 3388
SspI AATATT 1 cut(s) 1165
SspMI CTAG 8 cut(s) 39, 773, 875, 977, 1464, 1487, 3228, 3324
StyD4I CCNGG 6 cut(s) 68, 208, 221, 2360, 2371, 2783
StyI CCWWGG 3 cut(s) 2064, 2895, 2912
TaiI ACGT 3 cut(s) 818, 1690, 2571
TaqI TCGA 7 cut(s) 599, 603, 1020, 1834, 2704, 2905, 3289
TaqII GACCGA 1 cut(s) 24
TatI WGTACW 5 cut(s) 291, 1134, 1597, 1844, 2432
TauI GCSGC 1 cut(s) 3253
TscAI CASTG 6 cut(s) 222, 1051, 1801, 2197, 2239, 2385
TseFI GTSAC 1 cut(s) 2380
TseI GCWGC 9 cut(s) 323, 340, 843, 909, 1039, 1091, 1322, 1734, 2249
Tsp45I GTSAC 1 cut(s) 2380
TspGWI ACGGA 2 cut(s) 631, 738
TspRI CASTG 6 cut(s) 222, 1051, 1801, 2197, 2239, 2385
Van91I CCANNNNNTGG 1 cut(s) 1454
VpaK11BI GGWCC 7 cut(s) 7, 113, 1258, 1316, 1445, 2624, 3111
VspI ATTAAT 2 cut(s) 1479, 3129
XagI CCTNNNNNAGG 1 cut(s) 2312
XapI RAATTY 5 cut(s) 898, 1566, 1786, 2077, 2946
XbaI TCTAGA 2 cut(s) 772, 874
XceI RCATGY 2 cut(s) 127, 2144
XmiI GTMKAC 3 cut(s) 1085, 1173, 2344
XmnI GAANNNNTTC 3 cut(s) 149, 520, 783
XspI CTAG 8 cut(s) 39, 773, 875, 977, 1464, 1487, 3228, 3324
ZrmI AGTACT 3 cut(s) 293, 1846, 2434
Zsp2I ATGCAT 4 cut(s) 504, 522, 1397, 1779
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.