Domain of unknown function (DUF4228)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G64700 |
| fragaria_vesca | FvH4_5g10680 |
| malus_domestica | MD06G1121500.v1.1 MD14G1138100.v1.1 |
| prunus_persica | Prupe.5G132000_v2.0.a1 |
| pyrus_communis | pycom14g11320 |
| rosa_chinensis | RchiOBHm_Chr7g0187471 |
| rosa_laevigata | RLG00000004778 |
| rosa_multiflora | Rmu_sc0001230.1_g000008 |
| rosa_roxburghii | Rroxscaffold_3G00267400 |
| rosa_rugosa | Rorug06G0481800 |
| rosa_samantha | Rh7AG086300 Rh7BG087900 Rh7CG087300 Rh7DG088900 |
| rosa_wichuraiana | Rw7G007620 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfaI | GTAC | 1 cut(s) | 59 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 222 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 175, 207 |
| AluBI | AGCT | 1 cut(s) | 88 |
| AluI | AGCT | 1 cut(s) | 88 |
| Alw21I | GWGCWC | 1 cut(s) | 108 |
| Ama87I | CYCGRG | 1 cut(s) | 232 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 250 |
| AsuHPI | GGTGA | 1 cut(s) | 94 |
| AsuII | TTCGAA | 1 cut(s) | 53 |
| AvaI | CYCGRG | 1 cut(s) | 232 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 20, 52, 235, 267 |
| Bbv12I | GWGCWC | 1 cut(s) | 108 |
| BccI | CCATC | 1 cut(s) | 260 |
| BfaI | CTAG | 1 cut(s) | 278 |
| BmeT110I | CYCGRG | 1 cut(s) | 232 |
| BmiI | GGNNCC | 1 cut(s) | 227 |
| Bpu14I | TTCGAA | 1 cut(s) | 53 |
| BpuEI | CTTGAG | 1 cut(s) | 111 |
| BsaJI | CCNNGG | 2 cut(s) | 16, 42 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 175, 205 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 222 |
| BseDI | CCNNGG | 2 cut(s) | 16, 42 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 222 |
| BseMII | CTCAG | 1 cut(s) | 155 |
| BsiHKAI | GWGCWC | 1 cut(s) | 108 |
| BsiHKCI | CYCGRG | 1 cut(s) | 232 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 222 |
| BsoBI | CYCGRG | 1 cut(s) | 232 |
| Bsp119I | TTCGAA | 1 cut(s) | 53 |
| Bsp1286I | GDGCHC | 1 cut(s) | 108 |
| Bsp143I | GATC | 1 cut(s) | 217 |
| Bsp19I | CCATGG | 1 cut(s) | 16 |
| BspCNI | CTCAG | 1 cut(s) | 154 |
| BspLI | GGNNCC | 1 cut(s) | 227 |
| BspT104I | TTCGAA | 1 cut(s) | 53 |
| BssECI | CCNNGG | 2 cut(s) | 16, 42 |
| BssMI | GATC | 1 cut(s) | 217 |
| BssT1I | CCWWGG | 1 cut(s) | 16 |
| Bst4CI | ACNGT | 1 cut(s) | 169 |
| Bst6I | CTCTTC | 1 cut(s) | 23 |
| BstBI | TTCGAA | 1 cut(s) | 53 |
| BstDEI | CTNAG | 2 cut(s) | 141, 258 |
| BstDSI | CCRYGG | 1 cut(s) | 16 |
| BstKTI | GATC | 1 cut(s) | 220 |
| BstMBI | GATC | 1 cut(s) | 217 |
| BtgI | CCRYGG | 1 cut(s) | 16 |
| BtsIMutI | CAGTG | 1 cut(s) | 227 |
| Csp6I | GTAC | 1 cut(s) | 58 |
| CviAII | CATG | 1 cut(s) | 17 |
| CviJI | RGCY | 4 cut(s) | 88, 125, 173, 228 |
| CviKI_1 | RGCY | 4 cut(s) | 88, 125, 173, 228 |
| CviQI | GTAC | 1 cut(s) | 58 |
| DdeI | CTNAG | 2 cut(s) | 141, 258 |
| DpnI | GATC | 1 cut(s) | 219 |
| DpnII | GATC | 1 cut(s) | 217 |
| Eam1104I | CTCTTC | 1 cut(s) | 23 |
| EarI | CTCTTC | 1 cut(s) | 23 |
| Eco130I | CCWWGG | 1 cut(s) | 16 |
| Eco88I | CYCGRG | 1 cut(s) | 232 |
| EcoT14I | CCWWGG | 1 cut(s) | 16 |
| ErhI | CCWWGG | 1 cut(s) | 16 |
| FaeI | CATG | 1 cut(s) | 20 |
| FaiI | YATR | 1 cut(s) | 18 |
| FatI | CATG | 1 cut(s) | 16 |
| FspBI | CTAG | 1 cut(s) | 278 |
| Hin1II | CATG | 1 cut(s) | 20 |
| HinfI | GANTC | 1 cut(s) | 139 |
| HphI | GGTGA | 1 cut(s) | 94 |
| Hpy188I | TCNGA | 2 cut(s) | 138, 217 |
| Hpy188III | TCNNGA | 5 cut(s) | 101, 128, 143, 163, 232 |
| HpyAV | CCTTC | 1 cut(s) | 73 |
| HpyCH4III | ACNGT | 1 cut(s) | 169 |
| HpyCH4IV | ACGT | 1 cut(s) | 66 |
| HpyF3I | CTNAG | 2 cut(s) | 141, 258 |
| HpySE526I | ACGT | 1 cut(s) | 66 |
| Hsp92II | CATG | 1 cut(s) | 20 |
| Kzo9I | GATC | 1 cut(s) | 217 |
| LmnI | GCTCC | 1 cut(s) | 225 |
| LpnPI | CCDG | 6 cut(s) | 74, 114, 122, 128, 148, 186 |
| MaeI | CTAG | 1 cut(s) | 278 |
| MaeII | ACGT | 1 cut(s) | 66 |
| MalI | GATC | 1 cut(s) | 219 |
| MboI | GATC | 1 cut(s) | 217 |
| MboII | GAAGA | 1 cut(s) | 40 |
| MhlI | GDGCHC | 1 cut(s) | 108 |
| MluCI | AATT | 1 cut(s) | 146 |
| MlyI | GAGTC | 1 cut(s) | 133 |
| MmeI | TCCRAC | 2 cut(s) | 93, 116 |
| MnlI | CCTC | 4 cut(s) | 24, 37, 124, 239 |
| MroXI | GAANNNNTTC | 1 cut(s) | 250 |
| NcoI | CCATGG | 1 cut(s) | 16 |
| NdeII | GATC | 1 cut(s) | 217 |
| NlaIII | CATG | 1 cut(s) | 20 |
| NlaIV | GGNNCC | 1 cut(s) | 227 |
| NspV | TTCGAA | 1 cut(s) | 53 |
| PaeR7I | CTCGAG | 1 cut(s) | 232 |
| PdmI | GAANNNNTTC | 1 cut(s) | 250 |
| PleI | GAGTC | 1 cut(s) | 133 |
| PpsI | GAGTC | 1 cut(s) | 133 |
| PspN4I | GGNNCC | 1 cut(s) | 227 |
| RsaI | GTAC | 1 cut(s) | 59 |
| RsaNI | GTAC | 1 cut(s) | 58 |
| Sau3AI | GATC | 1 cut(s) | 217 |
| SchI | GAGTC | 1 cut(s) | 133 |
| SduI | GDGCHC | 1 cut(s) | 108 |
| SetI | ASST | 6 cut(s) | 35, 69, 84, 90, 111, 205 |
| Sfr274I | CTCGAG | 1 cut(s) | 232 |
| SfuI | TTCGAA | 1 cut(s) | 53 |
| SlaI | CTCGAG | 1 cut(s) | 232 |
| SmlI | CTYRAG | 2 cut(s) | 126, 232 |
| SmoI | CTYRAG | 2 cut(s) | 126, 232 |
| Sse9I | AATT | 1 cut(s) | 146 |
| SspI | AATATT | 1 cut(s) | 273 |
| SspMI | CTAG | 1 cut(s) | 278 |
| StyI | CCWWGG | 1 cut(s) | 16 |
| TaaI | ACNGT | 1 cut(s) | 169 |
| TaiI | ACGT | 1 cut(s) | 69 |
| TaqI | TCGA | 2 cut(s) | 53, 233 |
| TasI | AATT | 1 cut(s) | 146 |
| TatI | WGTACW | 1 cut(s) | 57 |
| TscAI | CASTG | 1 cut(s) | 227 |
| TspDTI | ATGAA | 2 cut(s) | 41, 243 |
| TspRI | CASTG | 1 cut(s) | 227 |
| XhoI | CTCGAG | 1 cut(s) | 232 |
| XmnI | GAANNNNTTC | 1 cut(s) | 250 |
| XspI | CTAG | 1 cut(s) | 278 |