Domain of unknown function (DUF4228)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G64700 |
| fragaria_vesca | FvH4_5g10680 |
| malus_domestica | MD06G1121500.v1.1 MD14G1138100.v1.1 |
| prunus_persica | Prupe.5G132000_v2.0.a1 |
| pyrus_communis | pycom14g11320 |
| rosa_chinensis | RchiOBHm_Chr7g0187471 |
| rosa_laevigata | RLG00000004778 |
| rosa_multiflora | Rmu_sc0001230.1_g000008 |
| rosa_roxburghii | Rroxscaffold_3G00267400 |
| rosa_rugosa | Rorug06G0481800 |
| rosa_samantha | Rh7AG086300 Rh7BG087900 Rh7CG087300 Rh7DG088900 |
| rosa_wichuraiana | Rw7G007620 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 192 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 569 |
| AccII | CGCG | 1 cut(s) | 231 |
| AciI | CCGC | 7 cut(s) | 231, 279, 369, 435, 450, 480, 528 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 81, 569 |
| AgsI | TTSAA | 2 cut(s) | 71, 112 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 553 |
| AjiI | CACGTC | 1 cut(s) | 550 |
| AjnI | CCWGG | 1 cut(s) | 562 |
| AluBI | AGCT | 2 cut(s) | 167, 263 |
| AluI | AGCT | 2 cut(s) | 167, 263 |
| Alw26I | GTCTC | 4 cut(s) | 32, 90, 137, 233 |
| AspLEI | GCGC | 1 cut(s) | 231 |
| AspS9I | GGNCC | 1 cut(s) | 560 |
| AsuHPI | GGTGA | 1 cut(s) | 356 |
| AvaII | GGWCC | 1 cut(s) | 560 |
| BanII | GRGCYC | 3 cut(s) | 123, 219, 545 |
| BccI | CCATC | 3 cut(s) | 37, 341, 605 |
| BciT130I | CCWGG | 1 cut(s) | 564 |
| BclI | TGATCA | 1 cut(s) | 604 |
| BcoDI | GTCTC | 4 cut(s) | 32, 90, 137, 233 |
| BfaI | CTAG | 1 cut(s) | 625 |
| BisI | GCNGC | 1 cut(s) | 481 |
| BlsI | GCNGC | 1 cut(s) | 482 |
| Bme1390I | CCNGG | 1 cut(s) | 564 |
| Bme18I | GGWCC | 1 cut(s) | 560 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 553 |
| BmgBI | CACGTC | 1 cut(s) | 550 |
| BmgT120I | GGNCC | 1 cut(s) | 560 |
| BmiI | GGNNCC | 2 cut(s) | 122, 218 |
| BmrFI | CCNGG | 1 cut(s) | 564 |
| BpmI | CTGGAG | 2 cut(s) | 107, 203 |
| BsaI | GGTCTC | 1 cut(s) | 90 |
| BsaJI | CCNNGG | 2 cut(s) | 75, 563 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 81, 569 |
| Bse1I | ACTGG | 1 cut(s) | 210 |
| Bse3DI | GCAATG | 2 cut(s) | 451, 517 |
| BseBI | CCWGG | 1 cut(s) | 564 |
| BseDI | CCNNGG | 2 cut(s) | 75, 563 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 81, 569 |
| BseMI | GCAATG | 2 cut(s) | 451, 517 |
| BseMII | CTCAG | 1 cut(s) | 80 |
| BseNI | ACTGG | 1 cut(s) | 210 |
| Bsh1236I | CGCG | 1 cut(s) | 231 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 81, 569 |
| BsmAI | GTCTC | 4 cut(s) | 32, 90, 137, 233 |
| Bso31I | GGTCTC | 1 cut(s) | 90 |
| Bsp1286I | GDGCHC | 3 cut(s) | 123, 219, 545 |
| Bsp143I | GATC | 1 cut(s) | 604 |
| BspACI | CCGC | 7 cut(s) | 231, 279, 369, 435, 450, 480, 528 |
| BspCNI | CTCAG | 1 cut(s) | 81 |
| BspFNI | CGCG | 1 cut(s) | 231 |
| BspHI | TCATGA | 1 cut(s) | 607 |
| BspLI | GGNNCC | 2 cut(s) | 122, 218 |
| BspTNI | GGTCTC | 1 cut(s) | 90 |
| BsrDI | GCAATG | 2 cut(s) | 451, 517 |
| BsrI | ACTGG | 1 cut(s) | 210 |
| BssECI | CCNNGG | 2 cut(s) | 75, 563 |
| BssMI | GATC | 1 cut(s) | 604 |
| Bst2UI | CCWGG | 1 cut(s) | 564 |
| Bst4CI | ACNGT | 1 cut(s) | 137 |
| BstDEI | CTNAG | 1 cut(s) | 89 |
| BstDSI | CCRYGG | 1 cut(s) | 75 |
| BstFNI | CGCG | 1 cut(s) | 231 |
| BstHHI | GCGC | 1 cut(s) | 231 |
| BstKTI | GATC | 1 cut(s) | 607 |
| BstMAI | GTCTC | 4 cut(s) | 32, 90, 137, 233 |
| BstMBI | GATC | 1 cut(s) | 604 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 366, 441, 486 |
| BstNI | CCWGG | 1 cut(s) | 564 |
| BstSCI | CCNGG | 1 cut(s) | 562 |
| BstUI | CGCG | 1 cut(s) | 231 |
| BtgI | CCRYGG | 1 cut(s) | 75 |
| BtgZI | GCGATG | 1 cut(s) | 56 |
| BtrI | CACGTC | 1 cut(s) | 550 |
| BtsI | GCAGTG | 3 cut(s) | 325, 361, 496 |
| BtsIMutI | CAGTG | 3 cut(s) | 325, 361, 496 |
| CciI | TCATGA | 1 cut(s) | 607 |
| CfoI | GCGC | 1 cut(s) | 231 |
| Cfr13I | GGNCC | 1 cut(s) | 560 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 499, 534 |
| CviAII | CATG | 2 cut(s) | 21, 608 |
| DdeI | CTNAG | 1 cut(s) | 89 |
| DpnI | GATC | 1 cut(s) | 606 |
| DpnII | GATC | 1 cut(s) | 604 |
| DriI | GACNNNNNGTC | 1 cut(s) | 553 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 553 |
| EciI | GGCGGA | 2 cut(s) | 450, 465 |
| Eco24I | GRGCYC | 3 cut(s) | 123, 219, 545 |
| Eco31I | GGTCTC | 1 cut(s) | 90 |
| Eco47I | GGWCC | 1 cut(s) | 560 |
| EcoRII | CCWGG | 1 cut(s) | 562 |
| EcoT38I | GRGCYC | 3 cut(s) | 123, 219, 545 |
| FaeI | CATG | 2 cut(s) | 24, 611 |
| FatI | CATG | 2 cut(s) | 20, 607 |
| FauI | CCCGC | 1 cut(s) | 272 |
| FauNDI | CATATG | 1 cut(s) | 151 |
| FbaI | TGATCA | 1 cut(s) | 604 |
| Fnu4HI | GCNGC | 1 cut(s) | 481 |
| FriOI | GRGCYC | 3 cut(s) | 123, 219, 545 |
| Fsp4HI | GCNGC | 1 cut(s) | 481 |
| FspBI | CTAG | 1 cut(s) | 625 |
| GlaI | GCGC | 1 cut(s) | 230 |
| GluI | GCNGC | 1 cut(s) | 481 |
| GsuI | CTGGAG | 2 cut(s) | 107, 203 |
| HhaI | GCGC | 1 cut(s) | 231 |
| Hin1II | CATG | 2 cut(s) | 24, 611 |
| Hin6I | GCGC | 1 cut(s) | 229 |
| HinP1I | GCGC | 1 cut(s) | 229 |
| HinfI | GANTC | 2 cut(s) | 25, 465 |
| HphI | GGTGA | 1 cut(s) | 356 |
| Hpy188I | TCNGA | 2 cut(s) | 90, 547 |
| Hpy188III | TCNNGA | 3 cut(s) | 124, 220, 608 |
| HpyCH4III | ACNGT | 1 cut(s) | 137 |
| HpyCH4IV | ACGT | 1 cut(s) | 549 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 366, 441, 486 |
| HpyF3I | CTNAG | 1 cut(s) | 89 |
| HpySE526I | ACGT | 1 cut(s) | 549 |
| Hsp92II | CATG | 2 cut(s) | 24, 611 |
| HspAI | GCGC | 1 cut(s) | 229 |
| Ksp22I | TGATCA | 1 cut(s) | 604 |
| Kzo9I | GATC | 1 cut(s) | 604 |
| LmnI | GCTCC | 2 cut(s) | 126, 222 |
| MaeI | CTAG | 1 cut(s) | 625 |
| MaeII | ACGT | 1 cut(s) | 549 |
| MalI | GATC | 1 cut(s) | 606 |
| MboI | GATC | 1 cut(s) | 604 |
| MboII | GAAGA | 1 cut(s) | 263 |
| MhlI | GDGCHC | 3 cut(s) | 123, 219, 545 |
| MluCI | AATT | 1 cut(s) | 127 |
| MlyI | GAGTC | 1 cut(s) | 34 |
| MspA1I | CMGCKG | 2 cut(s) | 167, 263 |
| MspR9I | CCNGG | 1 cut(s) | 564 |
| MvaI | CCWGG | 1 cut(s) | 564 |
| MvnI | CGCG | 1 cut(s) | 231 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 366, 441, 486 |
| NdeI | CATATG | 1 cut(s) | 151 |
| NdeII | GATC | 1 cut(s) | 604 |
| NlaIII | CATG | 2 cut(s) | 24, 611 |
| NlaIV | GGNNCC | 2 cut(s) | 122, 218 |
| PagI | TCATGA | 1 cut(s) | 607 |
| PfeI | GAWTC | 1 cut(s) | 465 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 569 |
| PkrI | GCNGC | 1 cut(s) | 482 |
| PleI | GAGTC | 1 cut(s) | 33 |
| PpsI | GAGTC | 1 cut(s) | 33 |
| PsiI | TTATAA | 1 cut(s) | 192 |
| Psp6I | CCWGG | 1 cut(s) | 562 |
| PspGI | CCWGG | 1 cut(s) | 562 |
| PspN4I | GGNNCC | 2 cut(s) | 122, 218 |
| PspPI | GGNCC | 1 cut(s) | 560 |
| PvuII | CAGCTG | 2 cut(s) | 167, 263 |
| SatI | GCNGC | 1 cut(s) | 481 |
| Sau3AI | GATC | 1 cut(s) | 604 |
| Sau96I | GGNCC | 1 cut(s) | 560 |
| SchI | GAGTC | 1 cut(s) | 34 |
| ScrFI | CCNGG | 1 cut(s) | 564 |
| SduI | GDGCHC | 3 cut(s) | 123, 219, 545 |
| SetI | ASST | 9 cut(s) | 18, 86, 169, 248, 265, 499, 552, 562, 595 |
| SinI | GGWCC | 1 cut(s) | 560 |
| Sse9I | AATT | 1 cut(s) | 127 |
| SsiI | CCGC | 7 cut(s) | 231, 279, 369, 435, 450, 480, 528 |
| SspMI | CTAG | 1 cut(s) | 625 |
| StyD4I | CCNGG | 1 cut(s) | 562 |
| TaaI | ACNGT | 1 cut(s) | 137 |
| TaiI | ACGT | 1 cut(s) | 552 |
| TasI | AATT | 1 cut(s) | 127 |
| TauI | GCSGC | 1 cut(s) | 483 |
| TfiI | GAWTC | 1 cut(s) | 465 |
| TscAI | CASTG | 3 cut(s) | 325, 361, 496 |
| TspDTI | ATGAA | 2 cut(s) | 9, 216 |
| TspRI | CASTG | 3 cut(s) | 325, 361, 496 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 569 |
| VpaK11BI | GGWCC | 1 cut(s) | 560 |
| XspI | CTAG | 1 cut(s) | 625 |