pycom14g13360

Belongs to the peptidase M18 family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
Physical Location & Seq
Reverse (-)
16298442 .. 16301475
3034 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1461 bp
ATGCCAAAGCAAGAACCAGACTCCGTTGTCTCTGATCTCATCAGCTTCCTAAACGCCGCCCCCACCGCCTTCCACGCCGTCGACGAGGCGAAGAAGCAGCTGCGAAGCGCGGGCTACGAGCAAGTTTTGGAGAGGGAGGATTGGAAATTGGAAGCTGGTAAAACGTATTTCTTTACCAGGAATTACTCCACCATTGTTGCTTTCGCAATCGGTAAAAAGTATGTTGCTGGAAACGGATTTCATATTGTTGGTGCTCATACTGATAGTCCTTGTCTCAAATTGAAACCGGTTTCCAAGGTTGCTAAAGGCGGGTTCTTGGAAGTGGGTGTCCAAACTTATGGTGGTGGCTTGTGGCATACATGGTTCGACCGTGACTTGACGATTGCAGGAAGGGTGATAGTGGCAGAGGAAAAGGATGGCTCTGTTTCATATTCGCATAAACTTGTTAGAATTGAGGAGCCCATAATGCGGATCCCTACTCTGGCAATTCACTTAGACAGGGATGTTAAAGATGCATTCAAGGTGAATACACAGACGCATCTTCTTCCCATCTTGGCAACGGCAGTCAAGGCCGAGCTCGAAAAAGTGGTTGCTGAAGATGGTGAGGCTAACAGCGATGCTCAGACTGATGGAAAGAAATCCAATGAGAAAACAACCTCAAATGCCTCGAAGCATCACTCACTTCTACTACAGCTACTTGCAGATCAGCTTGGATGTGAACCGGAACATATATCTGATTTTGAATTGCAAGTATGTGATACTCAACCAAGCATAGTAGCTGGTGCCGCAAAAGAATTTCTTTTCTCAGGAAGGCTTGATAATCTTTGCATGTCATTTTGCTCTCTAAAGGCATTGATAGACGCAACATCTTCTGATAGCAACCTTGAAGATGAGTCTGGTGTTAGAATGGTGGCTTTGTTTGATCATGAGGAGGTCGGATCTGATTCAGCCCAGGGCGCTGGGTCTCCAGCCATGTTGAATACTCTTTCACGAATTACAAGTTCCTTCACCACAGATTCTAAGCTGCTCGAGAAAGCTATTCAGAGGAGCTTTCTTGTATCTGCTGACATGGCACATGCCTTACATCCTAATTATATGGACAAACACGAAGAGAATCACCAACCCAAGTTGCATGGGGGCCTTGTGATCAAACACAATGCAAATCAACGCTACGCAACCAATGCCGTCACTGCATTAATATTCAGGGAGATAGCAAGGAATCACAGCCTTCCTGTCCAGGACTTTGTGGTTCGTAATGACATGGCATGCGGTTCGACCATCGGTCCCATTCTTGCAAGTGGAGTGGGAATACGAACCGTTGATGTAGGTGCACCGCAGCTGTCGATGCATAGCATACGAGAAATGTGTGCTGTTGATGATGTGACGCATTCATACGAGCATTTCAAAGCCTTCTTCCAGGAGTTCACTCATCTGGATGCAAAGATTAAAGTGGACGCGTAG

Protein Analysis

487

Amino Acids

53.27

Weight (kDa)

5.81

Isoelectric Point (pI)

32.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_M18 PF02127 16 - 472 5.6e-163 Aminopeptidase I zinc metalloprotease (M18)
Peptidase_M42 PF05343 343 - 464 9.4e-06 M42 glutamyl aminopeptidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0013125)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 26
AccB1I GGYRCC 1 cut(s) 782
AccI GTMKAC 1 cut(s) 81
AccII CGCG 2 cut(s) 110, 1457
AciI CCGC 8 cut(s) 57, 66, 110, 309, 469, 786, 1269, 1334
AclWI GGATC 3 cut(s) 466, 479, 946
AcsI RAATTY 1 cut(s) 794
AcuI CTGAAG 1 cut(s) 615
AfiI CCNNNNNNNGG 2 cut(s) 468, 481
AflIII ACRYGT 1 cut(s) 1455
AgeI ACCGGT 1 cut(s) 286
AgsI TTSAA 6 cut(s) 283, 520, 743, 887, 979, 1405
AhdI GACNNNNNGTC 1 cut(s) 1281
AjnI CCWGG 4 cut(s) 176, 951, 1236, 1416
Alw21I GWGCWC 3 cut(s) 256, 579, 1333
Alw26I GTCTC 3 cut(s) 34, 278, 969
Alw44I GTGCAC 1 cut(s) 1329
AlwI GGATC 3 cut(s) 466, 479, 946
Ama87I CYCGRG 1 cut(s) 1028
AoxI GGCC 2 cut(s) 570, 1138
ApaLI GTGCAC 1 cut(s) 1329
ApeKI GCWGC 4 cut(s) 97, 100, 1024, 1336
ApoI RAATTY 1 cut(s) 794
AseI ATTAAT 1 cut(s) 1196
AsiGI ACCGGT 1 cut(s) 286
AspLEI GCGC 2 cut(s) 110, 959
AspS9I GGNCC 2 cut(s) 1138, 1283
AsuHPI GGTGA 5 cut(s) 406, 535, 614, 1000, 1109
AvaI CYCGRG 1 cut(s) 1028
AvaII GGWCC 1 cut(s) 1283
BaeGI GKGCMC 1 cut(s) 1333
BamHI GGATCC 1 cut(s) 471
BanI GGYRCC 1 cut(s) 782
BanII GRGCYC 2 cut(s) 462, 579
Bbv12I GWGCWC 3 cut(s) 256, 579, 1333
BbvI GCAGC 4 cut(s) 87, 109, 1011, 1348
BccI CCATC 5 cut(s) 410, 557, 593, 623, 1286
BceAI ACGGC 3 cut(s) 62, 576, 1169
BcgI CGANNNNNNTGC 2 cut(s) 1254, 1288
BciT130I CCWGG 4 cut(s) 178, 953, 1238, 1418
BclI TGATCA 2 cut(s) 922, 1146
BcoDI GTCTC 3 cut(s) 34, 278, 969
BfmI CTRYAG 1 cut(s) 689
BfoI RGCGCY 1 cut(s) 960
BisI GCNGC 6 cut(s) 57, 98, 101, 786, 1025, 1337
BlsI GCNGC 6 cut(s) 58, 99, 102, 787, 1026, 1338
Bme1390I CCNGG 4 cut(s) 178, 953, 1238, 1418
Bme18I GGWCC 1 cut(s) 1283
BmeRI GACNNNNNGTC 1 cut(s) 1281
BmeT110I CYCGRG 1 cut(s) 1028
BmgT120I GGNCC 2 cut(s) 1138, 1283
BmiI GGNNCC 5 cut(s) 459, 473, 784, 1139, 1285
BmrFI CCNGG 4 cut(s) 178, 953, 1238, 1418
BmsI GCATC 6 cut(s) 502, 547, 607, 682, 1335, 1426
BpmI CTGGAG 1 cut(s) 951
BsaI GGTCTC 1 cut(s) 969
BsaJI CCNNGG 3 cut(s) 294, 951, 952
BsaWI WCCGGW 2 cut(s) 286, 721
Bsc4I CCNNNNNNNGG 2 cut(s) 468, 481
Bse118I RCCGGY 1 cut(s) 286
BseBI CCWGG 4 cut(s) 178, 953, 1238, 1418
BseDI CCNNGG 3 cut(s) 294, 951, 952
BseGI GGATG 5 cut(s) 421, 508, 719, 1084, 1441
BseLI CCNNNNNNNGG 2 cut(s) 468, 481
BseMII CTCAG 2 cut(s) 635, 819
BseRI GAGGAG 3 cut(s) 470, 944, 1060
BseSI GKGCMC 1 cut(s) 1333
BseXI GCAGC 4 cut(s) 87, 109, 1011, 1348
BseYI CCCAGC 1 cut(s) 959
Bsh1236I CGCG 2 cut(s) 110, 1457
Bsh1285I CGRYCG 1 cut(s) 370
BshFI GGCC 2 cut(s) 572, 1140
BshNI GGYRCC 1 cut(s) 782
BshTI ACCGGT 1 cut(s) 286
BsiEI CGRYCG 1 cut(s) 370
BsiHKAI GWGCWC 3 cut(s) 256, 579, 1333
BsiHKCI CYCGRG 1 cut(s) 1028
BsiSI CCGG 2 cut(s) 287, 722
BslFI GGGAC 1 cut(s) 1269
BslI CCNNNNNNNGG 2 cut(s) 468, 481
BsmAI GTCTC 3 cut(s) 34, 278, 969
BsmFI GGGAC 1 cut(s) 1269
BsmI GAATGC 2 cut(s) 515, 1387
BsnI GGCC 2 cut(s) 572, 1140
Bso31I GGTCTC 1 cut(s) 969
BsoBI CYCGRG 1 cut(s) 1028
Bsp1286I GDGCHC 4 cut(s) 256, 462, 579, 1333
Bsp143I GATC 6 cut(s) 34, 471, 703, 922, 938, 1146
BspACI CCGC 8 cut(s) 57, 66, 110, 309, 469, 786, 1269, 1334
BspANI GGCC 2 cut(s) 572, 1140
BspCNI CTCAG 2 cut(s) 634, 818
BspFNI CGCG 2 cut(s) 110, 1457
BspHI TCATGA 1 cut(s) 925
BspLI GGNNCC 5 cut(s) 459, 473, 784, 1139, 1285
BspPI GGATC 3 cut(s) 466, 479, 946
BspT107I GGYRCC 1 cut(s) 782
BspTNI GGTCTC 1 cut(s) 969
BsrFI RCCGGY 1 cut(s) 286
BssAI RCCGGY 1 cut(s) 286
BssECI CCNNGG 3 cut(s) 294, 951, 952
BssMI GATC 6 cut(s) 34, 471, 703, 922, 938, 1146
BssT1I CCWWGG 1 cut(s) 294
Bst2UI CCWGG 4 cut(s) 178, 953, 1238, 1418
Bst4CI ACNGT 2 cut(s) 371, 1318
Bst6I CTCTTC 1 cut(s) 1104
BstAPI GCANNNNNTGC 1 cut(s) 1181
BstC8I GCNNGC 2 cut(s) 112, 1267
BstDEI CTNAG 4 cut(s) 493, 621, 805, 1020
BstF5I GGATG 5 cut(s) 421, 508, 719, 1084, 1441
BstFNI CGCG 2 cut(s) 110, 1457
BstH2I RGCGCY 1 cut(s) 960
BstHHI GCGC 2 cut(s) 110, 959
BstKTI GATC 6 cut(s) 37, 474, 706, 925, 941, 1149
BstMAI GTCTC 3 cut(s) 34, 278, 969
BstMBI GATC 6 cut(s) 34, 471, 703, 922, 938, 1146
BstMCI CGRYCG 1 cut(s) 370
BstNI CCWGG 4 cut(s) 178, 953, 1238, 1418
BstNSI RCATGY 3 cut(s) 832, 1079, 1269
BstSCI CCNGG 4 cut(s) 176, 951, 1236, 1416
BstSFI CTRYAG 1 cut(s) 689
BstSLI GKGCMC 1 cut(s) 1333
BstUI CGCG 2 cut(s) 110, 1457
BstV1I GCAGC 4 cut(s) 87, 109, 1011, 1348
BstX2I RGATCY 2 cut(s) 471, 938
BstXI CCANNNNNNTGG 2 cut(s) 338, 959
BstYI RGATCY 2 cut(s) 471, 938
BsuRI GGCC 2 cut(s) 572, 1140
BtgZI GCGATG 1 cut(s) 630
BtsCI GGATG 5 cut(s) 421, 508, 719, 1084, 1441
BtsI GCAGTG 1 cut(s) 1188
BtsIMutI CAGTG 1 cut(s) 1188
Cac8I GCNNGC 2 cut(s) 112, 1267
CciI TCATGA 1 cut(s) 925
CfoI GCGC 2 cut(s) 110, 959
Cfr10I RCCGGY 1 cut(s) 286
Cfr13I GGNCC 2 cut(s) 1138, 1283
CseI GACGC 3 cut(s) 544, 869, 1393
CspAI ACCGGT 1 cut(s) 286
CspCI CAANNNNNGTGG 4 cut(s) 178, 213, 1284, 1319
CviAII CATG 9 cut(s) 360, 829, 926, 973, 1069, 1076, 1133, 1261, 1266
DdeI CTNAG 4 cut(s) 493, 621, 805, 1020
DpnI GATC 6 cut(s) 36, 473, 705, 924, 940, 1148
DpnII GATC 6 cut(s) 34, 471, 703, 922, 938, 1146
DrdI GACNNNNNNGTC 1 cut(s) 26
DriI GACNNNNNGTC 1 cut(s) 1281
DseDI GACNNNNNNGTC 1 cut(s) 26
Eam1104I CTCTTC 1 cut(s) 1104
Eam1105I GACNNNNNGTC 1 cut(s) 1281
EarI CTCTTC 1 cut(s) 1104
Ecl136II GAGCTC 1 cut(s) 577
Eco130I CCWWGG 1 cut(s) 294
Eco24I GRGCYC 2 cut(s) 462, 579
Eco31I GGTCTC 1 cut(s) 969
Eco47I GGWCC 1 cut(s) 1283
Eco53kI GAGCTC 1 cut(s) 577
Eco57I CTGAAG 1 cut(s) 615
Eco88I CYCGRG 1 cut(s) 1028
EcoICRI GAGCTC 1 cut(s) 577
EcoO109I RGGNCCY 1 cut(s) 1138
EcoRII CCWGG 4 cut(s) 176, 951, 1236, 1416
EcoT14I CCWWGG 1 cut(s) 294
EcoT22I ATGCAT 2 cut(s) 517, 1350
EcoT38I GRGCYC 2 cut(s) 462, 579
ErhI CCWWGG 1 cut(s) 294
FaeI CATG 9 cut(s) 363, 832, 929, 976, 1072, 1079, 1136, 1264, 1269
FalI AAGNNNNNCTT 2 cut(s) 783, 815
FaqI GGGAC 1 cut(s) 1269
FatI CATG 9 cut(s) 359, 828, 925, 972, 1068, 1075, 1132, 1260, 1265
FauI CCCGC 2 cut(s) 103, 302
FbaI TGATCA 2 cut(s) 922, 1146
FblI GTMKAC 1 cut(s) 81
Fnu4HI GCNGC 6 cut(s) 57, 98, 101, 786, 1025, 1337
FokI GGATG 5 cut(s) 428, 515, 726, 1071, 1448
FriOI GRGCYC 2 cut(s) 462, 579
Fsp4HI GCNGC 6 cut(s) 57, 98, 101, 786, 1025, 1337
GlaI GCGC 2 cut(s) 109, 958
GluI GCNGC 6 cut(s) 57, 98, 101, 786, 1025, 1337
GsaI CCCAGC 1 cut(s) 963
GsuI CTGGAG 1 cut(s) 951
HaeII RGCGCY 1 cut(s) 960
HaeIII GGCC 2 cut(s) 572, 1140
HapII CCGG 2 cut(s) 287, 722
HgaI GACGC 3 cut(s) 544, 869, 1393
HhaI GCGC 2 cut(s) 110, 959
Hin1II CATG 9 cut(s) 363, 832, 929, 976, 1072, 1079, 1136, 1264, 1269
Hin6I GCGC 2 cut(s) 108, 957
HinP1I GCGC 2 cut(s) 108, 957
HincII GTYRAC 1 cut(s) 82
HindII GTYRAC 1 cut(s) 82
HinfI GANTC 6 cut(s) 20, 893, 944, 1016, 1114, 1219
HpaII CCGG 2 cut(s) 287, 722
HphI GGTGA 5 cut(s) 406, 535, 614, 1000, 1109
Hpy166II GTNNAC 5 cut(s) 82, 719, 1331, 1425, 1453
Hpy188I TCNGA 7 cut(s) 34, 624, 736, 874, 938, 943, 1044
Hpy188III TCNNGA 5 cut(s) 807, 926, 990, 1030, 1433
Hpy8I GTNNAC 5 cut(s) 82, 719, 1331, 1425, 1453
Hpy99I CGWCG 2 cut(s) 83, 86
HpyAV CCTTC 6 cut(s) 79, 384, 804, 1015, 1238, 1420
HpyCH4III ACNGT 2 cut(s) 371, 1318
HpyCH4IV ACGT 1 cut(s) 164
HpyF3I CTNAG 4 cut(s) 493, 621, 805, 1020
HpySE526I ACGT 1 cut(s) 164
Hsp92II CATG 9 cut(s) 363, 832, 929, 976, 1072, 1079, 1136, 1264, 1269
HspAI GCGC 2 cut(s) 108, 957
Ksp22I TGATCA 2 cut(s) 922, 1146
Kzo9I GATC 6 cut(s) 34, 471, 703, 922, 938, 1146
LmnI GCTCC 2 cut(s) 457, 1047
Lsp1109I GCAGC 4 cut(s) 87, 109, 1011, 1348
LweI GCATC 6 cut(s) 502, 547, 607, 682, 1335, 1426
MaeII ACGT 1 cut(s) 164
MaeIII GTNAC 3 cut(s) 371, 1186, 1381
MalI GATC 6 cut(s) 36, 473, 705, 924, 940, 1148
MboI GATC 6 cut(s) 34, 471, 703, 922, 938, 1146
MboII GAAGA 8 cut(s) 103, 533, 536, 608, 861, 899, 1121, 1405
MflI RGATCY 2 cut(s) 471, 938
MhlI GDGCHC 4 cut(s) 256, 462, 579, 1333
MluCI AATT 9 cut(s) 146, 181, 278, 450, 486, 743, 794, 993, 1090
MluI ACGCGT 1 cut(s) 1455
MlyI GAGTC 2 cut(s) 14, 902
MmeI TCCRAC 1 cut(s) 916
Mph1103I ATGCAT 2 cut(s) 517, 1350
MseI TTAA 3 cut(s) 507, 1196, 1446
MslI CAYNNNNRTG 1 cut(s) 1434
MspA1I CMGCKG 2 cut(s) 100, 1339
MspI CCGG 2 cut(s) 287, 722
MspR9I CCNGG 4 cut(s) 178, 953, 1238, 1418
Mva1269I GAATGC 2 cut(s) 515, 1387
MvaI CCWGG 4 cut(s) 178, 953, 1238, 1418
MvnI CGCG 2 cut(s) 110, 1457
NdeII GATC 6 cut(s) 34, 471, 703, 922, 938, 1146
NlaIII CATG 9 cut(s) 363, 832, 929, 976, 1072, 1079, 1136, 1264, 1269
NlaIV GGNNCC 5 cut(s) 459, 473, 784, 1139, 1285
NmeAIII GCCGAG 1 cut(s) 598
NmuCI GTSAC 3 cut(s) 371, 1186, 1381
NsiI ATGCAT 2 cut(s) 517, 1350
NspI RCATGY 3 cut(s) 832, 1079, 1269
PaeI GCATGC 1 cut(s) 1269
PaeR7I CTCGAG 1 cut(s) 1028
PagI TCATGA 1 cut(s) 925
PasI CCCWGGG 1 cut(s) 952
PcsI WCGNNNNNNNCGW 1 cut(s) 81
PctI GAATGC 2 cut(s) 515, 1387
PfeI GAWTC 4 cut(s) 944, 1016, 1114, 1219
PfoI TCCNGGA 2 cut(s) 1236, 1416
PinAI ACCGGT 1 cut(s) 286
PkrI GCNGC 6 cut(s) 58, 99, 102, 787, 1026, 1338
PleI GAGTC 2 cut(s) 14, 901
PpsI GAGTC 2 cut(s) 14, 901
PshBI ATTAAT 1 cut(s) 1196
Psp124BI GAGCTC 1 cut(s) 579
Psp6I CCWGG 4 cut(s) 176, 951, 1236, 1416
PspFI CCCAGC 1 cut(s) 959
PspGI CCWGG 4 cut(s) 176, 951, 1236, 1416
PspN4I GGNNCC 5 cut(s) 459, 473, 784, 1139, 1285
PspPI GGNCC 2 cut(s) 1138, 1283
PsuI RGATCY 2 cut(s) 471, 938
PvuII CAGCTG 2 cut(s) 100, 1339
RseI CAYNNNNRTG 1 cut(s) 1434
SacI GAGCTC 1 cut(s) 579
SalI GTCGAC 1 cut(s) 80
SaqAI TTAA 3 cut(s) 507, 1196, 1446
SatI GCNGC 6 cut(s) 57, 98, 101, 786, 1025, 1337
Sau3AI GATC 6 cut(s) 34, 471, 703, 922, 938, 1146
Sau96I GGNCC 2 cut(s) 1138, 1283
SchI GAGTC 2 cut(s) 14, 902
ScrFI CCNGG 4 cut(s) 178, 953, 1238, 1418
SduI GDGCHC 4 cut(s) 256, 462, 579, 1333
SfaNI GCATC 6 cut(s) 502, 547, 607, 682, 1335, 1426
SfcI CTRYAG 1 cut(s) 689
Sfr274I CTCGAG 1 cut(s) 1028
SgrDI CGTCGACG 1 cut(s) 80
SinI GGWCC 1 cut(s) 1283
SlaI CTCGAG 1 cut(s) 1028
SmiMI CAYNNNNRTG 1 cut(s) 1434
SmlI CTYRAG 1 cut(s) 1028
SmoI CTYRAG 1 cut(s) 1028
SphI GCATGC 1 cut(s) 1269
Sse9I AATT 9 cut(s) 146, 181, 278, 450, 486, 743, 794, 993, 1090
SsiI CCGC 8 cut(s) 57, 66, 110, 309, 469, 786, 1269, 1334
SspI AATATT 1 cut(s) 1200
SstI GAGCTC 1 cut(s) 579
StyD4I CCNGG 4 cut(s) 176, 951, 1236, 1416
StyI CCWWGG 1 cut(s) 294
TaaI ACNGT 2 cut(s) 371, 1318
TaiI ACGT 1 cut(s) 167
TaqI TCGA 7 cut(s) 81, 366, 579, 668, 1029, 1274, 1343
TaqII GACCGA 1 cut(s) 1271
TasI AATT 9 cut(s) 146, 181, 278, 450, 486, 743, 794, 993, 1090
TauI GCSGC 2 cut(s) 59, 788
TfiI GAWTC 4 cut(s) 944, 1016, 1114, 1219
Tru1I TTAA 3 cut(s) 507, 1196, 1446
Tru9I TTAA 3 cut(s) 507, 1196, 1446
TscAI CASTG 1 cut(s) 1195
TseFI GTSAC 3 cut(s) 371, 1186, 1381
TseI GCWGC 4 cut(s) 97, 100, 1024, 1336
Tsp45I GTSAC 3 cut(s) 371, 1186, 1381
TspDTI ATGAA 3 cut(s) 230, 417, 1380
TspGWI ACGGA 2 cut(s) 13, 249
TspRI CASTG 1 cut(s) 1195
VneI GTGCAC 1 cut(s) 1329
VpaK11BI GGWCC 1 cut(s) 1283
VspI ATTAAT 1 cut(s) 1196
XapI RAATTY 1 cut(s) 794
XceI RCATGY 3 cut(s) 832, 1079, 1269
XcmI CCANNNNNNNNNTGG 1 cut(s) 338
XhoI CTCGAG 1 cut(s) 1028
XmiI GTMKAC 1 cut(s) 81
Zsp2I ATGCAT 2 cut(s) 517, 1350
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.