pycom14g20640

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
OG0016305
Physical Location & Seq
Reverse (-)
21659700 .. 21661484
1785 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1785 bp
ATGCTCCGTCCCCGCCCCCGCCCAGGTGCTCGCGCTTTTCTTGTACATACATTTACGCTTATCGTATCAAAATCCACACACAACTTGGCCACTGGGGAACAGACTTACTCCGGTTTCTTGCGTTCATGTGCCCAGACCTCTAACTTACCCCATGGCAGAGCACTCCATGCTAAACTCATCCGAGGCCTTCTGCCCTTCTCTCCTTTTCTTCAAAACCATCTACTCAACATGTACGCAAAATGCGGTGATCTTATTAATGCTCTCCAACTGTTTGATGAAATGCCTCACAAGAATGTTGTGTCGTGGTCTGCAGTCATTACGGGCTTTGTCCAACATGACTCTCCTAAGAAAGCCCTGTCTCTGTTTGGTCGTATGCACCGGGACGGCACCACCAAGCCCAATGAGTTTACCTTGGTTAGCGCCCTCCACGCCTGTTCCTTGTATGGGAACCTGACTCAAGCTTACCAAGTCTTTGCATTCATCGTTAGGCTAGGATTTGAGTGGAATGTTTTTCTCAGTAATGCGTTTTTGACTGTTTTAGTAAGACATGGGGAATTAAAAAATGCTTTGGAAGTTTTTGAGAATTGCCCCAATAAAGATATAGTGTCTTGGAATGCTGTGATGGCTGGCTACTTGCAGTATTCTTATTTGGAAATACCGACATTCTGGTGTCGCATGAATCTCGAGGGAGTGAAACCCGACAGCTACACATTTTCGAGTGTTCTCACTGGGTTGGCTGCTCTCACTGATCTTAAAATGGGCGAGCAAGTTCATGCACAGCTTGTCAGGTATGGCTATGGGGCTGAGATTTGCGTGGGGAATTCGTTGGCTGATATGTACATTAAGAATCAGAAGTTAATGGAGGGCTTCACAGCCTTTGATGAAATGCCTTCAAAAGATGTGTGGTCATGGACCCAAATGGCTGCTGGGTGTCTTCAATGTGGGGAGCCAAGGAAAACGCTTGAGGTTATTGATCGAATGAAGAAAGTGGGTATAATGCCTAACAAGTTCACGCTTGCAACTGCCCTGAATGCCTGTGCCAATTTGGCTTCCTTGGATGAAGGGCAGAAATTCCATGGCTTGAGAATTAAACTCGAAACCAGTACTGATGTTGATGTGTGCGTGGATAATGCTCTGCTAGACATGTATGGAAAATGTGGATGGATGGAGGGTGCAAGGCGTGTTTTTCAGTCCATGAAGGATCCGTCTGTGGTGTCATGGACCACAATGATCATGGGGTGCGCACAAAACGGGCAGGCTAGGGAAGCTCTTGAGATTTTTGATAAGATGAGGCTGGAGGAAGACGGTATTGAGCCAAATTACATCACCTTCATATGTGTACTCTACGCATGTAGCCAGGGCAGGTTTATTGATGAAGGATGGAAGTATTTTGCCTCCATGACTCAGGACCACGGAATCTCCCCAGGAGAAGACCATTATGCATGCATGGTGAATCTTCTAGGCCGAGCAGGATGCATTAAGGAAGCTGAGGAATTAATCCTGAGCATGCCCTTTAAGCCGGGTGTTCTGGTTTGGCAAACTCTTCTTGGTGCTTGCCAGATTCATGATGATACAGAAACTGGAAAGCGGGCGGCAGAGCATGCATTAGATATAAACAGAAGGGATCCATCGACGTATGTGCTACTGTCAAACATTTTTGCTGGATTGAGCAATTGGGATGACGTTGGGATGCTTAGGAAACTAATGGAGGTTAGGGATGTGCAGAAAGTGCCAGGATCCAGTTGGATTGAAGTGGAAAAAGGCCAGGCATCATCACCTCTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2

Protein Analysis

595

Amino Acids

66.42

Weight (kDa)

6.36

Isoelectric Point (pI)

39.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 97 - 145 8.9e-07 PPR repeat family
PPR PF01535 100 - 129 1e-05 PPR repeat
PPR_2 PF13041 199 - 246 3.5e-07 PPR repeat family
PPR_2 PF13041 300 - 348 4.1e-06 PPR repeat family
PPR_2 PF13041 402 - 452 1.3e-09 PPR repeat family
PPR_3 PF13812 402 - 451 2.6e-07 Pentatricopeptide repeat domain
PPR_1 PF12854 402 - 431 5.5e-06 PPR repeat
PPR PF01535 405 - 431 1.6e-08 PPR repeat
PPR_long PF17177 409 - 504 2.7e-07 Pentacotripeptide-repeat region of PRORP
E_motif PF20431 522 - 584 1.6e-16 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0016305)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g12540 FvH4_4g12540
malus_domestica MD14G1245400.v1.1
prunus_persica Prupe.5G243000_v2.0.a1
pyrus_communis pycom14g20640
rosa_chinensis RchiOBHm_Chr4g0411381
rosa_laevigata RLG00000008361
rosa_multiflora Rmu_sc0000629.1_g000021
rosa_roxburghii Rroxscaffold_5G00355960
rosa_rugosa Rorug04G0109600
rosa_samantha Rh4BG164500 Rh4CG179100 Rh4DG162200
rosa_wichuraiana Rw4G013840 Rw4G013940

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1243
Acc36I ACCTGC 1 cut(s) 1353
AccB1I GGYRCC 1 cut(s) 386
AccII CGCG 1 cut(s) 33
AciI CCGC 5 cut(s) 13, 19, 243, 1588, 1592
AclWI GGATC 6 cut(s) 1196, 1209, 1619, 1632, 1731, 1744
AcoI YGGCCR 1 cut(s) 87
AcsI RAATTY 2 cut(s) 820, 1070
AfaI GTAC 5 cut(s) 45, 233, 839, 1105, 1341
AfiI CCNNNNNNNGG 2 cut(s) 23, 444
AflIII ACRYGT 2 cut(s) 228, 1143
AgsI TTSAA 4 cut(s) 212, 894, 938, 1751
AjnI CCWGG 5 cut(s) 22, 1356, 1423, 1732, 1764
AluBI AGCT 5 cut(s) 461, 705, 781, 1268, 1487
AluI AGCT 5 cut(s) 461, 705, 781, 1268, 1487
Alw21I GWGCWC 2 cut(s) 31, 163
Alw26I GTCTC 1 cut(s) 363
AlwI GGATC 6 cut(s) 1196, 1209, 1619, 1632, 1731, 1744
AlwNI CAGNNNCTG 1 cut(s) 1580
Ama87I CYCGRG 1 cut(s) 683
AoxI GGCC 4 cut(s) 87, 184, 1462, 1762
ApeKI GCWGC 2 cut(s) 737, 923
ApoI RAATTY 2 cut(s) 820, 1070
AseI ATTAAT 2 cut(s) 255, 1496
AspLEI GCGC 3 cut(s) 35, 422, 1244
AspS9I GGNCC 3 cut(s) 912, 1221, 1408
AsuC2I CCSGG 2 cut(s) 380, 1521
AsuHPI GGTGA 4 cut(s) 257, 1318, 1462, 1767
AvaI CYCGRG 1 cut(s) 683
AvaII GGWCC 3 cut(s) 912, 1221, 1408
BaeGI GKGCMC 1 cut(s) 133
BalI TGGCCA 1 cut(s) 89
BamHI GGATCC 3 cut(s) 1201, 1624, 1736
BanI GGYRCC 1 cut(s) 386
BbsI GAAGAC 3 cut(s) 926, 1308, 1437
Bbv12I GWGCWC 2 cut(s) 31, 163
BbvCI CCTCAGC 1 cut(s) 1488
BbvI GCAGC 2 cut(s) 724, 910
BccI CCATC 6 cut(s) 225, 616, 1155, 1159, 1374, 1636
BceAI ACGGC 1 cut(s) 400
BcgI CGANNNNNNTGC 6 cut(s) 664, 698, 1455, 1489, 1621, 1655
BciT130I CCWGG 5 cut(s) 24, 1358, 1425, 1734, 1766
BclI TGATCA 1 cut(s) 1230
BcnI CCSGG 2 cut(s) 380, 1521
BcoDI GTCTC 1 cut(s) 363
BfaI CTAG 4 cut(s) 491, 1139, 1260, 1460
BfmI CTRYAG 1 cut(s) 309
BfoI RGCGCY 1 cut(s) 423
BfuAI ACCTGC 1 cut(s) 1353
BglI GCCNNNNNGGC 1 cut(s) 1046
BisI GCNGC 3 cut(s) 738, 924, 1593
BlsI GCNGC 3 cut(s) 739, 925, 1594
BmcAI AGTACT 1 cut(s) 1105
Bme1390I CCNGG 7 cut(s) 24, 380, 1358, 1425, 1521, 1734, 1766
Bme18I GGWCC 3 cut(s) 912, 1221, 1408
BmeT110I CYCGRG 1 cut(s) 683
BmgT120I GGNCC 3 cut(s) 912, 1221, 1408
BmiI GGNNCC 7 cut(s) 388, 449, 914, 948, 1203, 1626, 1738
BmrFI CCNGG 7 cut(s) 24, 380, 1358, 1425, 1521, 1734, 1766
BmrI ACTGGG 2 cut(s) 102, 738
BmsI GCATC 3 cut(s) 1463, 1680, 1778
BmuI ACTGGG 2 cut(s) 102, 738
BpiI GAAGAC 3 cut(s) 926, 1308, 1437
BpmI CTGGAG 1 cut(s) 1316
Bpu10I CCTNAGC 3 cut(s) 1488, 1502, 1694
BpuEI CTTGAG 4 cut(s) 441, 983, 1102, 1292
BpuMI CCSGG 2 cut(s) 380, 1521
BsaWI WCCGGW 1 cut(s) 110
BsaXI ACNNNNNCTCC 2 cut(s) 1403, 1433
Bsc4I CCNNNNNNNGG 2 cut(s) 23, 444
Bse1I ACTGG 5 cut(s) 97, 733, 1101, 1585, 1740
BseBI CCWGG 5 cut(s) 24, 1358, 1425, 1734, 1766
BseGI GGATG 9 cut(s) 177, 1063, 1166, 1170, 1385, 1478, 1684, 1695, 1723
BseLI CCNNNNNNNGG 2 cut(s) 23, 444
BseMII CTCAG 5 cut(s) 529, 795, 1418, 1479, 1493
BseNI ACTGG 5 cut(s) 97, 733, 1101, 1585, 1740
BseSI GKGCMC 1 cut(s) 133
BseXI GCAGC 2 cut(s) 724, 910
BseYI CCCAGC 1 cut(s) 926
BsgI GTGCAG 1 cut(s) 1742
Bsh1236I CGCG 1 cut(s) 33
BshFI GGCC 4 cut(s) 89, 186, 1464, 1764
BshNI GGYRCC 1 cut(s) 386
BsiHKAI GWGCWC 2 cut(s) 31, 163
BsiHKCI CYCGRG 1 cut(s) 683
BsiSI CCGG 3 cut(s) 111, 379, 1520
BslFI GGGAC 1 cut(s) 395
BslI CCNNNNNNNGG 2 cut(s) 23, 444
BsmAI GTCTC 1 cut(s) 363
BsmFI GGGAC 1 cut(s) 395
BsmI GAATGC 3 cut(s) 476, 619, 1036
BsnI GGCC 4 cut(s) 89, 186, 1464, 1764
BsoBI CYCGRG 1 cut(s) 683
Bsp1286I GDGCHC 3 cut(s) 31, 133, 163
Bsp1407I TGTACA 2 cut(s) 43, 837
Bsp143I GATC 7 cut(s) 247, 748, 973, 1201, 1230, 1624, 1736
Bsp19I CCATGG 2 cut(s) 151, 1075
BspACI CCGC 5 cut(s) 13, 19, 243, 1588, 1592
BspANI GGCC 4 cut(s) 89, 186, 1464, 1764
BspCNI CTCAG 5 cut(s) 528, 796, 1417, 1480, 1494
BspFNI CGCG 1 cut(s) 33
BspHI TCATGA 1 cut(s) 1564
BspLI GGNNCC 7 cut(s) 388, 449, 914, 948, 1203, 1626, 1738
BspMAI CTGCAG 1 cut(s) 313
BspMI ACCTGC 1 cut(s) 1353
BspPI GGATC 6 cut(s) 1196, 1209, 1619, 1632, 1731, 1744
BspT107I GGYRCC 1 cut(s) 386
BsrGI TGTACA 2 cut(s) 43, 837
BsrI ACTGG 5 cut(s) 97, 733, 1101, 1585, 1740
BssMI GATC 7 cut(s) 247, 748, 973, 1201, 1230, 1624, 1736
BssT1I CCWWGG 5 cut(s) 151, 411, 950, 1053, 1075
Bst2UI CCWGG 5 cut(s) 24, 1358, 1425, 1734, 1766
Bst4CI ACNGT 4 cut(s) 270, 535, 1307, 1647
Bst6I CTCTTC 1 cut(s) 1548
BstAPI GCANNNNNTGC 3 cut(s) 167, 1601, 1729
BstAUI TGTACA 2 cut(s) 43, 837
BstDEI CTNAG 7 cut(s) 345, 515, 804, 1404, 1488, 1502, 1694
BstDSI CCRYGG 3 cut(s) 151, 1075, 1411
BstF5I GGATG 9 cut(s) 177, 1063, 1166, 1170, 1385, 1478, 1684, 1695, 1723
BstFNI CGCG 1 cut(s) 33
BstH2I RGCGCY 1 cut(s) 423
BstHHI GCGC 3 cut(s) 35, 422, 1244
BstKTI GATC 7 cut(s) 250, 751, 976, 1204, 1233, 1627, 1739
BstMAI GTCTC 1 cut(s) 363
BstMBI GATC 7 cut(s) 247, 748, 973, 1201, 1230, 1624, 1736
BstMWI GCNNNNNNNGC 9 cut(s) 167, 428, 623, 1031, 1046, 1265, 1516, 1601, 1729
BstNI CCWGG 5 cut(s) 24, 1358, 1425, 1734, 1766
BstNSI RCATGY 6 cut(s) 232, 1147, 1353, 1446, 1510, 1604
BstSCI CCNGG 7 cut(s) 22, 378, 1356, 1423, 1519, 1732, 1764
BstSFI CTRYAG 1 cut(s) 309
BstSLI GKGCMC 1 cut(s) 133
BstUI CGCG 1 cut(s) 33
BstV1I GCAGC 2 cut(s) 724, 910
BstV2I GAAGAC 3 cut(s) 926, 1308, 1437
BstX2I RGATCY 3 cut(s) 1201, 1624, 1736
BstYI RGATCY 3 cut(s) 1201, 1624, 1736
BsuRI GGCC 4 cut(s) 89, 186, 1464, 1764
BtgI CCRYGG 3 cut(s) 151, 1075, 1411
BtsCI GGATG 9 cut(s) 177, 1063, 1166, 1170, 1385, 1478, 1684, 1695, 1723
BtsIMutI CAGTG 3 cut(s) 90, 726, 744
BveI ACCTGC 1 cut(s) 1353
CaiI CAGNNNCTG 1 cut(s) 1580
CciI TCATGA 1 cut(s) 1564
CfoI GCGC 3 cut(s) 35, 422, 1244
Cfr13I GGNCC 3 cut(s) 912, 1221, 1408
Csp6I GTAC 5 cut(s) 44, 232, 838, 1104, 1340
CviQI GTAC 5 cut(s) 44, 232, 838, 1104, 1340
DdeI CTNAG 7 cut(s) 345, 515, 804, 1404, 1488, 1502, 1694
DpnI GATC 7 cut(s) 249, 750, 975, 1203, 1232, 1626, 1738
DpnII GATC 7 cut(s) 247, 748, 973, 1201, 1230, 1624, 1736
EaeI YGGCCR 1 cut(s) 87
Eam1104I CTCTTC 1 cut(s) 1548
EarI CTCTTC 1 cut(s) 1548
Eco130I CCWWGG 5 cut(s) 151, 411, 950, 1053, 1075
Eco147I AGGCCT 1 cut(s) 186
Eco47I GGWCC 3 cut(s) 912, 1221, 1408
Eco88I CYCGRG 1 cut(s) 683
EcoRI GAATTC 1 cut(s) 820
EcoRII CCWGG 5 cut(s) 22, 1356, 1423, 1732, 1764
EcoT14I CCWWGG 5 cut(s) 151, 411, 950, 1053, 1075
EcoT22I ATGCAT 4 cut(s) 1444, 1448, 1478, 1606
ErhI CCWWGG 5 cut(s) 151, 411, 950, 1053, 1075
FaqI GGGAC 1 cut(s) 395
FauI CCCGC 3 cut(s) 20, 26, 1581
FauNDI CATATG 1 cut(s) 1334
FbaI TGATCA 1 cut(s) 1230
Fnu4HI GCNGC 3 cut(s) 738, 924, 1593
FokI GGATG 9 cut(s) 164, 1070, 1173, 1177, 1392, 1485, 1691, 1702, 1730
Fsp4HI GCNGC 3 cut(s) 738, 924, 1593
FspAI RTGCGCAY 1 cut(s) 1243
FspBI CTAG 4 cut(s) 491, 1139, 1260, 1460
FspI TGCGCA 1 cut(s) 1243
GlaI GCGC 3 cut(s) 34, 421, 1243
GluI GCNGC 3 cut(s) 738, 924, 1593
GsaI CCCAGC 1 cut(s) 930
GsuI CTGGAG 1 cut(s) 1316
HaeII RGCGCY 1 cut(s) 423
HaeIII GGCC 4 cut(s) 89, 186, 1464, 1764
HapII CCGG 3 cut(s) 111, 379, 1520
HhaI GCGC 3 cut(s) 35, 422, 1244
Hin6I GCGC 3 cut(s) 33, 420, 1242
HinP1I GCGC 3 cut(s) 33, 420, 1242
HindIII AAGCTT 1 cut(s) 459
HinfI GANTC 8 cut(s) 338, 454, 679, 847, 1402, 1416, 1453, 1561
HpaII CCGG 3 cut(s) 111, 379, 1520
HphI GGTGA 4 cut(s) 257, 1318, 1462, 1767
Hpy166II GTNNAC 3 cut(s) 408, 1011, 1340
Hpy188I TCNGA 2 cut(s) 182, 852
Hpy188III TCNNGA 5 cut(s) 683, 1271, 1406, 1501, 1565
Hpy8I GTNNAC 3 cut(s) 408, 1011, 1340
Hpy99I CGWCG 1 cut(s) 1636
HpyAV CCTTC 8 cut(s) 197, 205, 900, 1055, 1192, 1339, 1370, 1614
HpyCH4III ACNGT 4 cut(s) 270, 535, 1307, 1647
HpyCH4IV ACGT 2 cut(s) 1634, 1683
HpyF10VI GCNNNNNNNGC 9 cut(s) 167, 428, 623, 1031, 1046, 1265, 1516, 1601, 1729
HpyF3I CTNAG 7 cut(s) 345, 515, 804, 1404, 1488, 1502, 1694
HpySE526I ACGT 2 cut(s) 1634, 1683
HspAI GCGC 3 cut(s) 33, 420, 1242
Ksp22I TGATCA 1 cut(s) 1230
Kzo9I GATC 7 cut(s) 247, 748, 973, 1201, 1230, 1624, 1736
LmnI GCTCC 2 cut(s) 9, 946
Lsp1109I GCAGC 2 cut(s) 724, 910
LweI GCATC 3 cut(s) 1463, 1680, 1778
MaeI CTAG 4 cut(s) 491, 1139, 1260, 1460
MaeII ACGT 2 cut(s) 1634, 1683
MalI GATC 7 cut(s) 249, 750, 975, 1203, 1232, 1626, 1738
MboI GATC 7 cut(s) 247, 748, 973, 1201, 1230, 1624, 1736
MboII GAAGA 7 cut(s) 200, 926, 994, 1313, 1442, 1448, 1535
MfeI CAATTG 1 cut(s) 1672
MflI RGATCY 3 cut(s) 1201, 1624, 1736
MhlI GDGCHC 3 cut(s) 31, 133, 163
MlsI TGGCCA 1 cut(s) 89
MluCI AATT 9 cut(s) 554, 583, 820, 1042, 1070, 1086, 1318, 1493, 1672
MluNI TGGCCA 1 cut(s) 89
MlyI GAGTC 3 cut(s) 332, 448, 1396
MmeI TCCRAC 3 cut(s) 289, 355, 1724
Mox20I TGGCCA 1 cut(s) 89
Mph1103I ATGCAT 4 cut(s) 1444, 1448, 1478, 1606
MscI TGGCCA 1 cut(s) 89
MseI TTAA 9 cut(s) 255, 557, 753, 843, 857, 1089, 1479, 1496, 1515
MslI CAYNNNNRTG 2 cut(s) 291, 667
Msp20I TGGCCA 1 cut(s) 89
MspI CCGG 3 cut(s) 111, 379, 1520
MspR9I CCNGG 7 cut(s) 24, 380, 1358, 1425, 1521, 1734, 1766
MunI CAATTG 1 cut(s) 1672
Mva1269I GAATGC 3 cut(s) 476, 619, 1036
MvaI CCWGG 5 cut(s) 24, 1358, 1425, 1734, 1766
MvnI CGCG 1 cut(s) 33
MwoI GCNNNNNNNGC 9 cut(s) 167, 428, 623, 1031, 1046, 1265, 1516, 1601, 1729
NciI CCSGG 2 cut(s) 380, 1521
NcoI CCATGG 2 cut(s) 151, 1075
NdeI CATATG 1 cut(s) 1334
NdeII GATC 7 cut(s) 247, 748, 973, 1201, 1230, 1624, 1736
NlaIV GGNNCC 7 cut(s) 388, 449, 914, 948, 1203, 1626, 1738
NmeAIII GCCGAG 1 cut(s) 1490
NsbI TGCGCA 1 cut(s) 1243
NsiI ATGCAT 4 cut(s) 1444, 1448, 1478, 1606
NspI RCATGY 6 cut(s) 232, 1147, 1353, 1446, 1510, 1604
PaeI GCATGC 3 cut(s) 1446, 1510, 1604
PaeR7I CTCGAG 1 cut(s) 683
PagI TCATGA 1 cut(s) 1564
PceI AGGCCT 1 cut(s) 186
PciI ACATGT 2 cut(s) 228, 1143
PctI GAATGC 3 cut(s) 476, 619, 1036
PfeI GAWTC 5 cut(s) 679, 847, 1416, 1453, 1561
PkrI GCNGC 3 cut(s) 739, 925, 1594
PleI GAGTC 3 cut(s) 332, 448, 1396
PpsI GAGTC 3 cut(s) 332, 448, 1396
PscI ACATGT 2 cut(s) 228, 1143
PshBI ATTAAT 2 cut(s) 255, 1496
Psp6I CCWGG 5 cut(s) 22, 1356, 1423, 1732, 1764
PspFI CCCAGC 1 cut(s) 926
PspGI CCWGG 5 cut(s) 22, 1356, 1423, 1732, 1764
PspN4I GGNNCC 7 cut(s) 388, 449, 914, 948, 1203, 1626, 1738
PspPI GGNCC 3 cut(s) 912, 1221, 1408
PstI CTGCAG 1 cut(s) 313
PstNI CAGNNNCTG 1 cut(s) 1580
PsuI RGATCY 3 cut(s) 1201, 1624, 1736
RsaI GTAC 5 cut(s) 45, 233, 839, 1105, 1341
RsaNI GTAC 5 cut(s) 44, 232, 838, 1104, 1340
RseI CAYNNNNRTG 2 cut(s) 291, 667
SaqAI TTAA 9 cut(s) 255, 557, 753, 843, 857, 1089, 1479, 1496, 1515
SatI GCNGC 3 cut(s) 738, 924, 1593
Sau3AI GATC 7 cut(s) 247, 748, 973, 1201, 1230, 1624, 1736
Sau96I GGNCC 3 cut(s) 912, 1221, 1408
ScaI AGTACT 1 cut(s) 1105
SchI GAGTC 3 cut(s) 332, 448, 1396
ScrFI CCNGG 7 cut(s) 24, 380, 1358, 1425, 1521, 1734, 1766
SduI GDGCHC 3 cut(s) 31, 133, 163
SfaNI GCATC 3 cut(s) 1463, 1680, 1778
SfcI CTRYAG 1 cut(s) 309
Sfr274I CTCGAG 1 cut(s) 683
SinI GGWCC 3 cut(s) 912, 1221, 1408
SlaI CTCGAG 1 cut(s) 683
SmiMI CAYNNNNRTG 2 cut(s) 291, 667
SmlI CTYRAG 5 cut(s) 456, 683, 962, 1081, 1271
SmoI CTYRAG 5 cut(s) 456, 683, 962, 1081, 1271
SphI GCATGC 3 cut(s) 1446, 1510, 1604
Sse9I AATT 9 cut(s) 554, 583, 820, 1042, 1070, 1086, 1318, 1493, 1672
SseBI AGGCCT 1 cut(s) 186
SsiI CCGC 5 cut(s) 13, 19, 243, 1588, 1592
SspMI CTAG 4 cut(s) 491, 1139, 1260, 1460
StuI AGGCCT 1 cut(s) 186
StyD4I CCNGG 7 cut(s) 22, 378, 1356, 1423, 1519, 1732, 1764
StyI CCWWGG 5 cut(s) 151, 411, 950, 1053, 1075
TaaI ACNGT 4 cut(s) 270, 535, 1307, 1647
TaiI ACGT 2 cut(s) 1637, 1686
TaqI TCGA 5 cut(s) 684, 716, 976, 1095, 1631
TasI AATT 9 cut(s) 554, 583, 820, 1042, 1070, 1086, 1318, 1493, 1672
TatI WGTACW 4 cut(s) 43, 837, 1103, 1339
TauI GCSGC 1 cut(s) 1595
TfiI GAWTC 5 cut(s) 679, 847, 1416, 1453, 1561
Tru1I TTAA 9 cut(s) 255, 557, 753, 843, 857, 1089, 1479, 1496, 1515
Tru9I TTAA 9 cut(s) 255, 557, 753, 843, 857, 1089, 1479, 1496, 1515
TscAI CASTG 3 cut(s) 97, 733, 751
TseI GCWGC 2 cut(s) 737, 923
TspGWI ACGGA 2 cut(s) 1194, 1428
TspRI CASTG 3 cut(s) 97, 733, 751
VpaK11BI GGWCC 3 cut(s) 912, 1221, 1408
VspI ATTAAT 2 cut(s) 255, 1496
XapI RAATTY 2 cut(s) 820, 1070
XceI RCATGY 6 cut(s) 232, 1147, 1353, 1446, 1510, 1604
XcmI CCANNNNNNNNNTGG 4 cut(s) 82, 923, 1231, 1740
XhoI CTCGAG 1 cut(s) 683
XspI CTAG 4 cut(s) 491, 1139, 1260, 1460
ZrmI AGTACT 1 cut(s) 1105
Zsp2I ATGCAT 4 cut(s) 1444, 1448, 1478, 1606
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.