pycom15g06440

exocyst complex component

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
OG0015557
Physical Location & Seq
Forward (+)
3943804 .. 3946861
3058 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2160 bp
ATGGCGTCTAATTACAAATCAGCCGATTCAAGGCTCTCCGATCTCGAGCTAACATGTTCCGATTTGAAAACTCTCCTACGAGCGACGGCGGAAATGGAAGAAAATCTTGAAAAGATGGACAACAAGTTTGAAGTCATAGACGAAACGCTTCTAACTACGTCTAGAAGAGTAGCTCCTTTACAATCGCTAGCCATGGCCTCGAAAGCCTTGGAAACCAGAATCAACCGAGCTGTCGCGCCAGCTTTGGAGCTTCTTCACAACTTCAAGCTCTCTGAGACCATCCAGGATAAGCTCTTGGATCTCTCGGAGAAGTTGTTGAGCGAGAAGTCAATGAAGAAACGGCTCAAGAAGCTTGTCAAGTACGTGGACTGCGTGGACCAGTTGAAAATTGCGATTAACTGCATTTGTGAAGAGGGTGAGCCGGTGATCCAGAAGCTGCAGGAGGTGGTGGAGTTTTTGAGCCGGACGAAGGCCACGGACCAGTACAGAACGCACCGGCTGAGGGAGACGCTGGTGACTCTCAAGTCGCTGTACGAGACGGAGGTTGACGCCATGAGGTTTGAAGGATTGCTTGATGAGGCGCTGTTGAATTTGCAGGACGAGTATGAGAGTATATTGGAGCAGATTAGGCATCGGAATGTGGTGGATTTGCATGCTGCTTCGGATCAAGATGATCGGAGCGATGAGATGGCTATCGTGGGTTCGGGTTTGGGGACTGAGTTGGAGGTTGAACTTTTGAGAAGGATTTCACAAACCCTAGCTGCCGATGATTGCTTGGATATATGCATCGATATTTATGTTAAGGTGAGGTACAAAAGGGTGGCCAAAGCACTAATGAGGCTGAACCCTGATTACCTAAAAACCCACACACCAGAAGAAATAGATGAAATACCATGGGAGAGCTTGGAGACAGCCATAACCCTCTGGATCCAGCACTTCGAGCTCGCAGTCAAAGCAGTGCTCGTATCGGAGAAGAAACTCTGCGAACAAGTCCTAGGAGGAATAATGGAAGGACTGATATGGCCAGAATGCTTCGCCAAAATCGCAGGCAAAATCATGGCGGTGTTCTTCCGGTTTGGCGAAGGCGTTGCCCAAAGCAGCAAAGAACCACAGAAGTTGTTCAAGCTCCTTGACATGTTTGATTCCCTAGAGAAGCTGAAGCCTGGATTCTCAGAGGTTTTTGATGGCGAATCGGGGACCGACTTTTGTAAAAGATTCAGGGAGCTGGAGAAGCTTCTTGTTCATGCTTCCAGTAAAGTTTTTTGGGAATTTGGGCTTCAAATTGAAGACAATTCTGATGGATTGCCTCCACCACCAGACGGTTCGGTGCCGAAAATAGTAAGGTACGCAGTGAACTACTTGAAATACTTAGCAACTGAAAATTACAGCGTCCCCATGGCGAAAGTTCTCAGAACGGAGCAAATCTGGAAAGCCGGGATCTTGTCGAAACCAGAAACCGACGAGAATCTACTCAAAGACGCCATTTGCAACATCATGGAAGCTCTGCAGAGAAACGTGGAGTCGAAACGTTCCGGCTACAACAACAACAGCAGGGACAGGGACAAAATCGGCATTTCAATTCACATGCCACACGTGTTCTGCATGAACACGTACTGGTACATTTACATGAGGACGAGAAACACGGAGCTTGGGAAGCTGTTGGGAGACGGCTACTTGAGGAACAACTACAAGGTTGTAGCCGAGGAATCCGCTTACTTGTACCAGAAGCAATCGTGGGCTCCACTGGTTAGGATTCTGGAGAGGGACGATTTGGAGGAGCAGCAGAGCAAGGAAGCGAAGGCGGGGCTGGTGAGGGTGAAAATCGAGGCGTTCATGAAGGGCTTGGACGACATTTCGAAGAGCCACAGGGGATTCTGTGTAATTCCGGACGTTGACTTGCGGGAGCAGATTAGGGCGGCTACCGTTAAGCTGGTGATTCCGGCATACACCGAGTTCGTGAACTCGTTCTCGGGGTTGTTGCAGGGGAAGGGTTATCTGGGTCCTGACTCGGTTCAGGAGTTGTTGGAGAAAGTTTTTGACGGTGGGGATGGGAAGCTTAAGCGGAGAGGGTCTAAGGATCGGACGGGTGGTGGGAGCTCAGGGATGGATGGTGGGGTGAAGGACTATCGACGGTCCAGATCAAGTACTAATGACATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0006810 GO:0006887 GO:0008150 GO:0009987 GO:0016192 GO:0032940 GO:0046903 GO:0051179 GO:0051234
KEGG Pathways
Metabolic & Signaling
ko04910 map04910
Pfam Domains
Protein Families
Exo70

Protein Analysis

720

Amino Acids

81.75

Weight (kDa)

5.58

Isoelectric Point (pI)

40.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Exo70_C PF03081 309 - 672 2.4e-77 Exo70 exocyst complex subunit C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0015557)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g32950
malus_domestica MD08G1081000.v1.1 MD15G1068000.v1.1
prunus_persica Prupe.1G422000_v2.0.a1
pyrus_communis pycom15g06440
rosa_chinensis RchiOBHm_Chr6g0309751
rosa_laevigata RLG00000010538
rosa_multiflora Rmu_sc0007632.1_g000013
rosa_roxburghii Rroxscaffold_7G00159210
rosa_rugosa Rorug06G0374200
rosa_samantha Rh6AG487800 Rh6BG497400 Rh6CG502100 Rh6CG502200 Rh6DG488400
rosa_wichuraiana Rw6G042480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 523
AccB1I GGYRCC 1 cut(s) 1327
AccII CGCG 1 cut(s) 236
AccIII TCCGGA 1 cut(s) 1885
AciI CCGC 7 cut(s) 89, 1061, 1710, 1802, 1900, 1916, 2062
AclI AACGTT 1 cut(s) 1528
AclWI GGATC 7 cut(s) 306, 421, 672, 922, 935, 1445, 2085
AcoI YGGCCR 2 cut(s) 822, 1022
AcsI RAATTY 2 cut(s) 589, 1268
AcuI CTGAAG 1 cut(s) 1178
AcvI CACGTG 1 cut(s) 1594
AcyI GRCGYC 3 cut(s) 5, 549, 1479
AfaI GTAC 9 cut(s) 362, 485, 533, 812, 1346, 1613, 1619, 1721, 2146
AfiI CCNNNNNNNGG 4 cut(s) 30, 469, 502, 1319
AflII CTTAAG 1 cut(s) 2057
AflIII ACRYGT 5 cut(s) 53, 1134, 1591, 1593, 1608
AjnI CCWGG 2 cut(s) 282, 1162
Alw21I GWGCWC 3 cut(s) 945, 963, 2099
Alw26I GTCTC 5 cut(s) 269, 500, 530, 902, 1659
AlwI GGATC 7 cut(s) 306, 421, 672, 922, 935, 1445, 2085
AlwNI CAGNNNCTG 1 cut(s) 436
Ama87I CYCGRG 2 cut(s) 44, 1969
Aor13HI TCCGGA 1 cut(s) 1885
AoxI GGCC 4 cut(s) 195, 471, 822, 1022
ApeKI GCWGC 5 cut(s) 436, 656, 761, 1098, 1780
ApoI RAATTY 2 cut(s) 589, 1268
ArsI GACNNNNNNTTYG 2 cut(s) 110, 142
Asp700I GAANNNNTTC 4 cut(s) 147, 745, 1118, 1964
AspA2I CCTAGG 1 cut(s) 994
AspLEI GCGC 2 cut(s) 238, 583
AspS9I GGNCC 5 cut(s) 376, 478, 1197, 2000, 2133
AsuC2I CCSGG 1 cut(s) 1435
AsuHPI GGTGA 8 cut(s) 428, 436, 526, 817, 1822, 1828, 1945, 2128
AsuII TTCGAA 1 cut(s) 1856
AsuNHI GCTAGC 1 cut(s) 187
AvaI CYCGRG 2 cut(s) 44, 1969
AvaII GGWCC 5 cut(s) 376, 478, 1197, 2000, 2133
AvrII CCTAGG 1 cut(s) 994
BalI TGGCCA 2 cut(s) 824, 1024
BamHI GGATCC 1 cut(s) 927
BanI GGYRCC 1 cut(s) 1327
BanII GRGCYC 3 cut(s) 945, 1741, 2099
BbrPI CACGTG 1 cut(s) 1594
BbsI GAAGAC 1 cut(s) 1293
Bbv12I GWGCWC 3 cut(s) 945, 963, 2099
BbvCI CCTCAGC 1 cut(s) 500
BbvI GCAGC 5 cut(s) 423, 643, 748, 1110, 1792
BccI CCATC 8 cut(s) 109, 287, 682, 1178, 1292, 2042, 2098, 2102
BceAI ACGGC 3 cut(s) 102, 356, 1684
BcgI CGANNNNNNTGC 2 cut(s) 1070, 1104
BciT130I CCWGG 2 cut(s) 284, 1164
BcnI CCSGG 1 cut(s) 1435
BcoDI GTCTC 5 cut(s) 269, 500, 530, 902, 1659
BfaI CTAG 5 cut(s) 162, 188, 758, 995, 1148
BfmI CTRYAG 2 cut(s) 437, 1505
BfoI RGCGCY 1 cut(s) 584
BfrI CTTAAG 1 cut(s) 2057
BisI GCNGC 6 cut(s) 437, 657, 762, 1099, 1781, 1917
BlnI CCTAGG 1 cut(s) 994
BlsI GCNGC 6 cut(s) 438, 658, 763, 1100, 1782, 1918
BmcAI AGTACT 1 cut(s) 2146
Bme1390I CCNGG 3 cut(s) 284, 1164, 1435
Bme18I GGWCC 5 cut(s) 376, 478, 1197, 2000, 2133
BmeT110I CYCGRG 2 cut(s) 44, 1969
BmgT120I GGNCC 5 cut(s) 376, 478, 1197, 2000, 2133
BmiI GGNNCC 5 cut(s) 929, 1198, 1329, 1740, 2001
BmrFI CCNGG 3 cut(s) 284, 1164, 1435
BmsI GCATC 2 cut(s) 640, 795
BmtI GCTAGC 1 cut(s) 191
BpiI GAAGAC 1 cut(s) 1293
BpmI CTGGAG 2 cut(s) 1247, 1778
Bpu10I CCTNAGC 2 cut(s) 500, 2098
Bpu14I TTCGAA 1 cut(s) 1856
BpuEI CTTGAG 3 cut(s) 329, 506, 1696
BpuMI CCSGG 1 cut(s) 1435
Bsa29I ATCGAT 1 cut(s) 789
BsaAI YACGTR 3 cut(s) 364, 1594, 1611
BsaBI GATNNNNATC 1 cut(s) 692
BsaHI GRCGYC 3 cut(s) 5, 549, 1479
BsaI GGTCTC 1 cut(s) 269
BsaJI CCNNGG 7 cut(s) 192, 207, 474, 893, 994, 1395, 1701
BsaWI WCCGGW 2 cut(s) 1071, 1885
BsaXI ACNNNNNCTCC 2 cut(s) 299, 329
Bsc4I CCNNNNNNNGG 4 cut(s) 30, 469, 502, 1319
Bse118I RCCGGY 2 cut(s) 421, 495
Bse1I ACTGG 5 cut(s) 379, 481, 1251, 1619, 1749
Bse8I GATNNNNATC 1 cut(s) 692
BseAI TCCGGA 1 cut(s) 1885
BseBI CCWGG 2 cut(s) 284, 1164
BseCI ATCGAT 1 cut(s) 789
BseDI CCNNGG 7 cut(s) 192, 207, 474, 893, 994, 1395, 1701
BseGI GGATG 4 cut(s) 279, 2053, 2109, 2113
BseJI GATNNNNATC 1 cut(s) 692
BseLI CCNNNNNNNGG 4 cut(s) 30, 469, 502, 1319
BseMII CTCAG 6 cut(s) 264, 491, 708, 1185, 1423, 2112
BseNI ACTGG 5 cut(s) 379, 481, 1251, 1619, 1749
BseRI GAGGAG 1 cut(s) 1790
BseXI GCAGC 5 cut(s) 423, 643, 748, 1110, 1792
Bsh1236I CGCG 1 cut(s) 236
BshFI GGCC 4 cut(s) 197, 473, 824, 1024
BshNI GGYRCC 1 cut(s) 1327
BshVI ATCGAT 1 cut(s) 789
BsiHKAI GWGCWC 3 cut(s) 945, 963, 2099
BsiHKCI CYCGRG 2 cut(s) 44, 1969
BsiSI CCGG 8 cut(s) 422, 463, 496, 1072, 1434, 1533, 1886, 1940
BslFI GGGAC 6 cut(s) 727, 1210, 1376, 1568, 1574, 1778
BslI CCNNNNNNNGG 4 cut(s) 30, 469, 502, 1319
BsmAI GTCTC 5 cut(s) 269, 500, 530, 902, 1659
BsmBI CGTCTC 3 cut(s) 500, 530, 1659
BsmFI GGGAC 6 cut(s) 727, 1210, 1376, 1568, 1574, 1778
BsmI GAATGC 1 cut(s) 1034
BsnI GGCC 4 cut(s) 197, 473, 824, 1024
Bso31I GGTCTC 1 cut(s) 269
BsoBI CYCGRG 2 cut(s) 44, 1969
Bsp119I TTCGAA 1 cut(s) 1856
Bsp1286I GDGCHC 4 cut(s) 945, 963, 1741, 2099
Bsp13I TCCGGA 1 cut(s) 1885
Bsp143I GATC 9 cut(s) 40, 298, 426, 664, 673, 927, 1437, 2077, 2138
Bsp19I CCATGG 3 cut(s) 192, 893, 1395
BspACI CCGC 7 cut(s) 89, 1061, 1710, 1802, 1900, 1916, 2062
BspANI GGCC 4 cut(s) 197, 473, 824, 1024
BspCNI CTCAG 6 cut(s) 265, 492, 709, 1184, 1422, 2111
BspDI ATCGAT 1 cut(s) 789
BspEI TCCGGA 1 cut(s) 1885
BspFNI CGCG 1 cut(s) 236
BspHI TCATGA 1 cut(s) 1833
BspLI GGNNCC 5 cut(s) 929, 1198, 1329, 1740, 2001
BspMAI CTGCAG 2 cut(s) 441, 1509
BspOI GCTAGC 1 cut(s) 191
BspPI GGATC 7 cut(s) 306, 421, 672, 922, 935, 1445, 2085
BspQI GCTCTTC 1 cut(s) 1853
BspT104I TTCGAA 1 cut(s) 1856
BspT107I GGYRCC 1 cut(s) 1327
BspTI CTTAAG 1 cut(s) 2057
BspTNI GGTCTC 1 cut(s) 269
BsrFI RCCGGY 2 cut(s) 421, 495
BsrI ACTGG 5 cut(s) 379, 481, 1251, 1619, 1749
BssAI RCCGGY 2 cut(s) 421, 495
BssECI CCNNGG 7 cut(s) 192, 207, 474, 893, 994, 1395, 1701
BssMI GATC 9 cut(s) 40, 298, 426, 664, 673, 927, 1437, 2077, 2138
BssNI GRCGYC 3 cut(s) 5, 549, 1479
BssT1I CCWWGG 5 cut(s) 192, 207, 893, 994, 1395
Bst2UI CCWGG 2 cut(s) 284, 1164
Bst4CI ACNGT 4 cut(s) 1322, 1924, 2042, 2133
Bst6I CTCTTC 3 cut(s) 160, 405, 1853
BstACI GRCGYC 3 cut(s) 5, 549, 1479
BstAFI CTTAAG 1 cut(s) 2057
BstBAI YACGTR 3 cut(s) 364, 1594, 1611
BstBI TTCGAA 1 cut(s) 1856
BstC8I GCNNGC 5 cut(s) 189, 240, 654, 945, 1048
BstDEI CTNAG 8 cut(s) 273, 500, 717, 1171, 1369, 1409, 2073, 2098
BstDSI CCRYGG 4 cut(s) 192, 474, 893, 1395
BstF5I GGATG 4 cut(s) 279, 2053, 2109, 2113
BstFNI CGCG 1 cut(s) 236
BstH2I RGCGCY 1 cut(s) 584
BstHHI GCGC 2 cut(s) 238, 583
BstKTI GATC 9 cut(s) 43, 301, 429, 667, 676, 930, 1440, 2080, 2141
BstMAI GTCTC 5 cut(s) 269, 500, 530, 902, 1659
BstMBI GATC 9 cut(s) 40, 298, 426, 664, 673, 927, 1437, 2077, 2138
BstMWI GCNNNNNNNGC 8 cut(s) 203, 349, 628, 940, 953, 1043, 1231, 1654
BstNI CCWGG 2 cut(s) 284, 1164
BstNSI RCATGY 4 cut(s) 57, 656, 1138, 1588
BstSCI CCNGG 3 cut(s) 282, 1162, 1433
BstSFI CTRYAG 2 cut(s) 437, 1505
BstUI CGCG 1 cut(s) 236
BstV1I GCAGC 5 cut(s) 423, 643, 748, 1110, 1792
BstV2I GAAGAC 1 cut(s) 1293
BstX2I RGATCY 3 cut(s) 298, 927, 1437
BstYI RGATCY 3 cut(s) 298, 927, 1437
Bsu15I ATCGAT 1 cut(s) 789
BsuRI GGCC 4 cut(s) 197, 473, 824, 1024
BsuTUI ATCGAT 1 cut(s) 789
BtgI CCRYGG 4 cut(s) 192, 474, 893, 1395
BtgZI GCGATG 1 cut(s) 696
BtsCI GGATG 4 cut(s) 279, 2053, 2109, 2113
BtsI GCAGTG 2 cut(s) 963, 1356
BtsIMutI CAGTG 3 cut(s) 963, 1356, 1742
Cac8I GCNNGC 5 cut(s) 189, 240, 654, 945, 1048
CaiI CAGNNNCTG 1 cut(s) 436
CciI TCATGA 1 cut(s) 1833
CfoI GCGC 2 cut(s) 238, 583
Cfr10I RCCGGY 2 cut(s) 421, 495
Cfr13I GGNCC 5 cut(s) 376, 478, 1197, 2000, 2133
ClaI ATCGAT 1 cut(s) 789
CseI GACGC 4 cut(s) 517, 557, 1378, 1487
Csp6I GTAC 9 cut(s) 361, 484, 532, 811, 1345, 1612, 1618, 1720, 2145
CspCI CAANNNNNGTGG 2 cut(s) 1098, 1133
CviQI GTAC 9 cut(s) 361, 484, 532, 811, 1345, 1612, 1618, 1720, 2145
DdeI CTNAG 8 cut(s) 273, 500, 717, 1171, 1369, 1409, 2073, 2098
DpnI GATC 9 cut(s) 42, 300, 428, 666, 675, 929, 1439, 2079, 2140
DpnII GATC 9 cut(s) 40, 298, 426, 664, 673, 927, 1437, 2077, 2138
DrdI GACNNNNNNGTC 1 cut(s) 523
DseDI GACNNNNNNGTC 1 cut(s) 523
EaeI YGGCCR 2 cut(s) 822, 1022
Eam1104I CTCTTC 3 cut(s) 160, 405, 1853
EarI CTCTTC 3 cut(s) 160, 405, 1853
EciI GGCGGA 1 cut(s) 104
Ecl136II GAGCTC 2 cut(s) 943, 2097
Eco130I CCWWGG 5 cut(s) 192, 207, 893, 994, 1395
Eco24I GRGCYC 3 cut(s) 945, 1741, 2099
Eco31I GGTCTC 1 cut(s) 269
Eco47I GGWCC 5 cut(s) 376, 478, 1197, 2000, 2133
Eco53kI GAGCTC 2 cut(s) 943, 2097
Eco57I CTGAAG 1 cut(s) 1178
Eco72I CACGTG 1 cut(s) 1594
Eco88I CYCGRG 2 cut(s) 44, 1969
EcoICRI GAGCTC 2 cut(s) 943, 2097
EcoO109I RGGNCCY 1 cut(s) 2000
EcoRII CCWGG 2 cut(s) 282, 1162
EcoT14I CCWWGG 5 cut(s) 192, 207, 893, 994, 1395
EcoT22I ATGCAT 1 cut(s) 788
EcoT38I GRGCYC 3 cut(s) 945, 1741, 2099
ErhI CCWWGG 5 cut(s) 192, 207, 893, 994, 1395
Esp3I CGTCTC 3 cut(s) 500, 530, 1659
FalI AAGNNNNNCTT 4 cut(s) 90, 122, 555, 587
FaqI GGGAC 6 cut(s) 727, 1210, 1376, 1568, 1574, 1778
FauI CCCGC 2 cut(s) 1795, 1893
Fnu4HI GCNGC 6 cut(s) 437, 657, 762, 1099, 1781, 1917
FokI GGATG 4 cut(s) 266, 2060, 2116, 2120
FriOI GRGCYC 3 cut(s) 945, 1741, 2099
Fsp4HI GCNGC 6 cut(s) 437, 657, 762, 1099, 1781, 1917
FspBI CTAG 5 cut(s) 162, 188, 758, 995, 1148
GlaI GCGC 2 cut(s) 237, 582
GluI GCNGC 6 cut(s) 437, 657, 762, 1099, 1781, 1917
GsuI CTGGAG 2 cut(s) 1247, 1778
HaeII RGCGCY 1 cut(s) 584
HaeIII GGCC 4 cut(s) 197, 473, 824, 1024
HapII CCGG 8 cut(s) 422, 463, 496, 1072, 1434, 1533, 1886, 1940
HgaI GACGC 4 cut(s) 517, 557, 1378, 1487
HhaI GCGC 2 cut(s) 238, 583
Hin1I GRCGYC 3 cut(s) 5, 549, 1479
Hin6I GCGC 2 cut(s) 236, 581
HinP1I GCGC 2 cut(s) 236, 581
HincII GTYRAC 2 cut(s) 547, 1894
HindII GTYRAC 2 cut(s) 547, 1894
HindIII AAGCTT 3 cut(s) 350, 1232, 2054
HpaII CCGG 8 cut(s) 422, 463, 496, 1072, 1434, 1533, 1886, 1940
HphI GGTGA 8 cut(s) 428, 436, 526, 817, 1822, 1828, 1945, 2128
Hpy166II GTNNAC 6 cut(s) 367, 376, 547, 1354, 1894, 1960
Hpy8I GTNNAC 6 cut(s) 367, 376, 547, 1354, 1894, 1960
Hpy99I CGWCG 3 cut(s) 88, 1463, 2133
HpyAV CCTTC 9 cut(s) 463, 557, 735, 1004, 1076, 1792, 1831, 1981, 2113
HpyCH4III ACNGT 4 cut(s) 1322, 1924, 2042, 2133
HpyCH4IV ACGT 7 cut(s) 158, 363, 1515, 1528, 1593, 1610, 1890
HpyCH4V TGCA 9 cut(s) 402, 439, 595, 652, 786, 1488, 1507, 1602, 1981
HpyF10VI GCNNNNNNNGC 8 cut(s) 203, 349, 628, 940, 953, 1043, 1231, 1654
HpyF3I CTNAG 8 cut(s) 273, 500, 717, 1171, 1369, 1409, 2073, 2098
HpySE526I ACGT 7 cut(s) 158, 363, 1515, 1528, 1593, 1610, 1890
Hsp92I GRCGYC 3 cut(s) 5, 549, 1479
HspAI GCGC 2 cut(s) 236, 581
Kpn2I TCCGGA 1 cut(s) 1885
Kzo9I GATC 9 cut(s) 40, 298, 426, 664, 673, 927, 1437, 2077, 2138
LguI GCTCTTC 1 cut(s) 1853
Lsp1109I GCAGC 5 cut(s) 423, 643, 748, 1110, 1792
LweI GCATC 2 cut(s) 640, 795
MaeI CTAG 5 cut(s) 162, 188, 758, 995, 1148
MaeII ACGT 7 cut(s) 158, 363, 1515, 1528, 1593, 1610, 1890
MaeIII GTNAC 1 cut(s) 514
MalI GATC 9 cut(s) 42, 300, 428, 666, 675, 929, 1439, 2079, 2140
MboI GATC 9 cut(s) 40, 298, 426, 664, 673, 927, 1437, 2077, 2138
MflI RGATCY 3 cut(s) 298, 927, 1437
MhlI GDGCHC 4 cut(s) 945, 963, 1741, 2099
MlsI TGGCCA 2 cut(s) 824, 1024
MluCI AATT 9 cut(s) 10, 387, 589, 1268, 1281, 1291, 1381, 1578, 1881
MluNI TGGCCA 2 cut(s) 824, 1024
MlyI GAGTC 3 cut(s) 511, 1529, 2000
MmeI TCCRAC 2 cut(s) 702, 2004
Mox20I TGGCCA 2 cut(s) 824, 1024
Mph1103I ATGCAT 1 cut(s) 788
MroI TCCGGA 1 cut(s) 1885
MroXI GAANNNNTTC 4 cut(s) 147, 745, 1118, 1964
MscI TGGCCA 2 cut(s) 824, 1024
MseI TTAA 4 cut(s) 396, 801, 1926, 2058
MslI CAYNNNNRTG 3 cut(s) 636, 1061, 1625
Msp20I TGGCCA 2 cut(s) 824, 1024
MspCI CTTAAG 1 cut(s) 2057
MspI CCGG 8 cut(s) 422, 463, 496, 1072, 1434, 1533, 1886, 1940
MspR9I CCNGG 3 cut(s) 284, 1164, 1435
Mva1269I GAATGC 1 cut(s) 1034
MvaI CCWGG 2 cut(s) 284, 1164
MvnI CGCG 1 cut(s) 236
MwoI GCNNNNNNNGC 8 cut(s) 203, 349, 628, 940, 953, 1043, 1231, 1654
NciI CCSGG 1 cut(s) 1435
NcoI CCATGG 3 cut(s) 192, 893, 1395
NdeII GATC 9 cut(s) 40, 298, 426, 664, 673, 927, 1437, 2077, 2138
NheI GCTAGC 1 cut(s) 187
NlaIV GGNNCC 5 cut(s) 929, 1198, 1329, 1740, 2001
NmeAIII GCCGAG 1 cut(s) 1726
NmuCI GTSAC 1 cut(s) 514
NsiI ATGCAT 1 cut(s) 788
NspI RCATGY 4 cut(s) 57, 656, 1138, 1588
NspV TTCGAA 1 cut(s) 1856
PaeI GCATGC 1 cut(s) 656
PaeR7I CTCGAG 1 cut(s) 44
PagI TCATGA 1 cut(s) 1833
PciI ACATGT 2 cut(s) 53, 1134
PciSI GCTCTTC 1 cut(s) 1853
PcsI WCGNNNNNNNCGW 1 cut(s) 369
PctI GAATGC 1 cut(s) 1034
PdmI GAANNNNTTC 4 cut(s) 147, 745, 1118, 1964
PfoI TCCNGGA 1 cut(s) 282
PkrI GCNGC 6 cut(s) 438, 658, 763, 1100, 1782, 1918
PleI GAGTC 3 cut(s) 511, 1528, 2000
PmaCI CACGTG 1 cut(s) 1594
PmlI CACGTG 1 cut(s) 1594
PpsI GAGTC 3 cut(s) 511, 1528, 2000
Ppu21I YACGTR 3 cut(s) 364, 1594, 1611
PpuMI RGGWCCY 1 cut(s) 2000
PscI ACATGT 2 cut(s) 53, 1134
Psp124BI GAGCTC 2 cut(s) 945, 2099
Psp1406I AACGTT 1 cut(s) 1528
Psp5II RGGWCCY 1 cut(s) 2000
Psp6I CCWGG 2 cut(s) 282, 1162
PspCI CACGTG 1 cut(s) 1594
PspGI CCWGG 2 cut(s) 282, 1162
PspN4I GGNNCC 5 cut(s) 929, 1198, 1329, 1740, 2001
PspPI GGNCC 5 cut(s) 376, 478, 1197, 2000, 2133
PspPPI RGGWCCY 1 cut(s) 2000
PsrI GAACNNNNNNTAC 2 cut(s) 836, 868
PstI CTGCAG 2 cut(s) 441, 1509
PstNI CAGNNNCTG 1 cut(s) 436
PsuI RGATCY 3 cut(s) 298, 927, 1437
RsaI GTAC 9 cut(s) 362, 485, 533, 812, 1346, 1613, 1619, 1721, 2146
RsaNI GTAC 9 cut(s) 361, 484, 532, 811, 1345, 1612, 1618, 1720, 2145
RseI CAYNNNNRTG 3 cut(s) 636, 1061, 1625
SacI GAGCTC 2 cut(s) 945, 2099
SapI GCTCTTC 1 cut(s) 1853
SaqAI TTAA 4 cut(s) 396, 801, 1926, 2058
SatI GCNGC 6 cut(s) 437, 657, 762, 1099, 1781, 1917
Sau3AI GATC 9 cut(s) 40, 298, 426, 664, 673, 927, 1437, 2077, 2138
Sau96I GGNCC 5 cut(s) 376, 478, 1197, 2000, 2133
ScaI AGTACT 1 cut(s) 2146
SchI GAGTC 3 cut(s) 511, 1529, 2000
ScrFI CCNGG 3 cut(s) 284, 1164, 1435
SduI GDGCHC 4 cut(s) 945, 963, 1741, 2099
SfaNI GCATC 2 cut(s) 640, 795
SfcI CTRYAG 2 cut(s) 437, 1505
Sfr274I CTCGAG 1 cut(s) 44
SfuI TTCGAA 1 cut(s) 1856
SinI GGWCC 5 cut(s) 376, 478, 1197, 2000, 2133
SlaI CTCGAG 1 cut(s) 44
SmiMI CAYNNNNRTG 3 cut(s) 636, 1061, 1625
SmlI CTYRAG 5 cut(s) 44, 344, 521, 1675, 2057
SmoI CTYRAG 5 cut(s) 44, 344, 521, 1675, 2057
SphI GCATGC 1 cut(s) 656
Sse9I AATT 9 cut(s) 10, 387, 589, 1268, 1281, 1291, 1381, 1578, 1881
SsiI CCGC 7 cut(s) 89, 1061, 1710, 1802, 1900, 1916, 2062
SspMI CTAG 5 cut(s) 162, 188, 758, 995, 1148
SstI GAGCTC 2 cut(s) 945, 2099
StyD4I CCNGG 3 cut(s) 282, 1162, 1433
StyI CCWWGG 5 cut(s) 192, 207, 893, 994, 1395
TaaI ACNGT 4 cut(s) 1322, 1924, 2042, 2133
TaiI ACGT 7 cut(s) 161, 366, 1518, 1531, 1596, 1613, 1893
TaqI TCGA 9 cut(s) 45, 200, 789, 939, 1445, 1523, 1824, 1856, 2128
TaqII GACCGA 1 cut(s) 1214
TasI AATT 9 cut(s) 10, 387, 589, 1268, 1281, 1291, 1381, 1578, 1881
TatI WGTACW 2 cut(s) 483, 2144
TauI GCSGC 1 cut(s) 1919
Tru1I TTAA 4 cut(s) 396, 801, 1926, 2058
Tru9I TTAA 4 cut(s) 396, 801, 1926, 2058
TscAI CASTG 3 cut(s) 963, 1356, 1749
TseFI GTSAC 1 cut(s) 514
TseI GCWGC 5 cut(s) 436, 656, 761, 1098, 1780
Tsp45I GTSAC 1 cut(s) 514
TspDTI ATGAA 6 cut(s) 347, 900, 1232, 1619, 1822, 1850
TspGWI ACGGA 4 cut(s) 491, 554, 1430, 1658
TspRI CASTG 3 cut(s) 963, 1356, 1749
Vha464I CTTAAG 1 cut(s) 2057
VpaK11BI GGWCC 5 cut(s) 376, 478, 1197, 2000, 2133
XapI RAATTY 2 cut(s) 589, 1268
XbaI TCTAGA 1 cut(s) 161
XceI RCATGY 4 cut(s) 57, 656, 1138, 1588
XhoI CTCGAG 1 cut(s) 44
XmaJI CCTAGG 1 cut(s) 994
XmnI GAANNNNTTC 4 cut(s) 147, 745, 1118, 1964
XspI CTAG 5 cut(s) 162, 188, 758, 995, 1148
ZrmI AGTACT 1 cut(s) 2146
Zsp2I ATGCAT 1 cut(s) 788
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.