Rroxscaffold_7G00159210

exocyst complex component

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0015557
Physical Location & Seq
Forward (+)
2457572 .. 2460126
2555 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00159210.1

Sequence Viewer

Length: 2133 bp
ATGGCGACCAATGAAGAAGATTCAAGGCTCTCTGACATTCAGCTAGCCTGCACAGACTTGAGAACCCTAGTCAAAGCCTCTGCCTTGATGGAACAGAATCTGAAAAAGATGGACTACAAGTTTAACCTCATTGACGAAACACTAACCTCAGCCTCAAGAAGAGTAGCTCCACTACAGTCCATGTCCATGGCCTCCAGGGCCCTGGAAACCAGAATCAACCGAGCTGTCACACCGGCCCTTGCGCTCCTCGACAACTTCAAGCGATCAGAGTCTATACAGGACAAGCTTCTCGACTTGTCATCGAAGCTGTCAAACGAGAAGAACATGAACAAGAGGCTCAAGACGCTCATCAAGTACGTGGACTGTGTGGATCAGCTCAAGGCGGCGATAAGCTCCATATGCGAGGAGGGCGAGCCGGTGATCCAGAGGCTTCAGGAGGTGGTGGAGTTTCTGAGCCGGACGAAGGCGACTGATCAGTACAGGATCCATCGGTTGAGGGAGACTCTGATCACTTTGAAGGCCTTGTATGAGACAGAGGTGGATGCTATGAGATTTGAAGGGCTGCTTGATGAGGCTTTGCTGAATTTGCAGGATGAGTATGAGAATATATTGCAGCAAATAAAGCATCAAAATATAGTGGATCCATCACAGGCTGTAGATAAGGATAATGAAGGTGATGATCAGATGGTGATCACGGGTTCTAATTTGGGCACCGAGTTGGAAATTGAACTTCTAAGGCGGATCACACAAACCCTAGCTGCCGAAGATTGTCTGGATATATGCATCGATATTTATGTTAAGGTGAGATACAGAAGAGTGGCAAAAGCACTAATGCGGCTAAACCCAGAGTACTTAAGAACACACAGTCCGGAAGAAATAGACGAAATGGCTTGGGAGAATTTAGAGACGGCCATAACCCTTTGGATCCAACACTTCGAACTCGCAGTGAAAGCAGTGCTGGTCTCAGAGAAGAATTTCTGCGAACAAGTACTGGGAGGCATAATGGACGGGCTGGTCTGGCCAGAATGCTTTGTAAAAATCGCAGACAAAATCATGGCGGTGTTCTTCAGATTCGGAGAAGGCGTAGCCCGGAGCAGCAAAGAGCCACAAAAACTGTTCAAGTTGCTAGACATGTTCGAGTCCTTGGAGAAACTCAAGCCTGCATTCTCTCAAGTCTTCGAAGGTGAAGCAGGGACTGACATTTGCGTTCGATTCAGAGAACTCGAGAAGCTTCTGATTCACGCTTCGAGTAAAATTTTCTGGGAGTTTGGCCTTCAAATTGAAGGAAACTCAGATGCGGTACCTCCCCCTCAAGATGGGTCAGTCCCCAAAATTGTAAGGTACGCTGTGAATTACATGAAGTACTTAGCAACAGTGGCTTACTCTGTTCCCATGGCCAGAGTCCTCAGAACAGAGCAGATTTGGAAAGCTGGGATTCTGTCTAGACCCGAATCCGACGAGAATCTTCTCAGAGATGCCGTTTCCCACATCATGGAAGCTCTGCAGAGGAATGTAGAAGCGAAACGCTCGGGTTATCGGGTCGATAAGTTGGCTCTGCCCCATGTTTTTGCAATGAACACGTACTGGTATATTTACATGAGGACCAAAAACACAGAGCTAGGGAAGCTCGTGGGAGACCAATACATGAAGAAAAATTACAAAGTAATAGCAGAGGAATCGGCTTACATGTATCAGAAGATAGTGTGGGTTCCTCTGGTTAGGGTTTTGGAGAAAGATGATGATTTGGAGCTGGAGAGCAAGGAAGCAATGGTGGGAACGGTTAGGGCGAAAATGGAGGCGTTTATGAAGGGCTTGGATGATGTATCAAAGAGGCACAAAGGATACTATAGTATTCCTGACGAAGATTTGAAGGCGCAGATTAGATTGGCGACGGTGAAGCTTGTGGTTCCGGCGTACAGTGAGTTCTTGGACTCGTTCTCGATTTTGTTGCCGGGGAAGTCGTCGTATTTGAGCTCTGAGTCAGTTCAGCAGTTGCTGTGTCAGATATTTGAGGGTGGGGAGGTGAAGCTTAAGAGGCGTGGGTCTAGGGATCGGACGGCCGGAGGGAGCTCCGCGTTGGACGGTGCGGTTAAGGACTTTCGACGGACTAGGTCAAATACCAGTGAAAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0006810 GO:0006887 GO:0008150 GO:0009987 GO:0016192 GO:0032940 GO:0046903 GO:0051179 GO:0051234
KEGG Pathways
Metabolic & Signaling
ko04910 map04910
Pfam Domains
Protein Families
Exo70

Protein Analysis

710

Amino Acids

81.07

Weight (kDa)

5.74

Isoelectric Point (pI)

46.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Exo70_C PF03081 308 - 664 9.6e-78 Exo70 exocyst complex subunit C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0015557)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g32950
malus_domestica MD08G1081000.v1.1 MD15G1068000.v1.1
prunus_persica Prupe.1G422000_v2.0.a1
pyrus_communis pycom15g06440
rosa_chinensis RchiOBHm_Chr6g0309751
rosa_laevigata RLG00000010538
rosa_multiflora Rmu_sc0007632.1_g000013
rosa_roxburghii Rroxscaffold_7G00159210
rosa_rugosa Rorug06G0374200
rosa_samantha Rh6AG487800 Rh6BG497400 Rh6CG502100 Rh6CG502200 Rh6DG488400
rosa_wichuraiana Rw6G042480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1013
Acc65I GGTACC 1 cut(s) 1300
AccB1I GGYRCC 2 cut(s) 710, 1300
AccB7I CCANNNNNTGG 1 cut(s) 1492
AccII CGCG 1 cut(s) 2075
AccIII TCCGGA 1 cut(s) 868
AciI CCGC 7 cut(s) 383, 739, 835, 1058, 1298, 2073, 2087
AcoI YGGCCR 4 cut(s) 909, 1019, 1395, 2058
AcsI RAATTY 4 cut(s) 583, 898, 973, 1254
AcuI CTGAAG 2 cut(s) 416, 1051
AfaI GTAC 9 cut(s) 356, 479, 851, 990, 1302, 1343, 1364, 1583, 1916
AfiI CCNNNNNNNGG 3 cut(s) 463, 1316, 1492
AflII CTTAAG 2 cut(s) 853, 2030
AflIII ACRYGT 3 cut(s) 1131, 1578, 1686
AgsI TTSAA 9 cut(s) 24, 259, 517, 557, 728, 1120, 1277, 1283, 1870
AjnI CCWGG 2 cut(s) 194, 201
AloI GAACNNNNNNTCC 2 cut(s) 850, 882
Alw21I GWGCWC 2 cut(s) 1976, 2072
Alw26I GTCTC 5 cut(s) 494, 524, 899, 967, 1629
AlwNI CAGNNNCTG 3 cut(s) 100, 1196, 1996
Ama87I CYCGRG 2 cut(s) 1223, 1528
Aor13HI TCCGGA 1 cut(s) 868
AoxI GGCC 9 cut(s) 189, 198, 234, 519, 909, 1019, 1270, 1395, 2058
ApaI GGGCCC 1 cut(s) 202
ApeKI GCWGC 4 cut(s) 562, 613, 758, 1095
ApoI RAATTY 4 cut(s) 583, 898, 973, 1254
Asp700I GAANNNNTTC 1 cut(s) 974
Asp718I GGTACC 1 cut(s) 1300
AspLEI GCGC 2 cut(s) 244, 1876
AspS9I GGNCC 4 cut(s) 198, 199, 235, 1602
AsuC2I CCSGG 2 cut(s) 1090, 1953
AsuHPI GGTGA 7 cut(s) 430, 686, 700, 814, 1196, 1906, 2035
AsuII TTCGAA 2 cut(s) 936, 1179
AsuNHI GCTAGC 1 cut(s) 43
AvaI CYCGRG 2 cut(s) 1223, 1528
AvaII GGWCC 1 cut(s) 1602
BaeGI GKGCMC 2 cut(s) 202, 713
BaeI ACNNNNGTAYC 2 cut(s) 1834, 1867
BalI TGGCCA 2 cut(s) 1021, 1397
BamHI GGATCC 3 cut(s) 483, 640, 924
BanI GGYRCC 2 cut(s) 710, 1300
BanII GRGCYC 3 cut(s) 202, 1976, 2072
BarI GAAGNNNNNNTAC 2 cut(s) 1640, 1672
BauI CACGAG 1 cut(s) 1628
BbsI GAAGAC 1 cut(s) 1168
Bbv12I GWGCWC 2 cut(s) 1976, 2072
BbvCI CCTCAGC 1 cut(s) 148
BbvI GCAGC 4 cut(s) 549, 625, 745, 1107
BccI CCATC 6 cut(s) 82, 103, 495, 652, 679, 1310
BceAI ACGGC 3 cut(s) 924, 1463, 2073
BcgI CGANNNNNNTGC 4 cut(s) 1659, 1693, 1930, 1964
BciT130I CCWGG 2 cut(s) 196, 203
BciVI GTATCC 1 cut(s) 1835
BclI TGATCA 4 cut(s) 472, 507, 679, 690
BcnI CCSGG 2 cut(s) 1090, 1953
BcoDI GTCTC 5 cut(s) 494, 524, 899, 967, 1629
BfaI CTAG 8 cut(s) 44, 68, 755, 1127, 1443, 1619, 2046, 2109
BfmI CTRYAG 4 cut(s) 173, 654, 1502, 1846
BfrI CTTAAG 2 cut(s) 853, 2030
BfuI GTATCC 1 cut(s) 1835
BglI GCCNNNNNGGC 1 cut(s) 197
BisI GCNGC 6 cut(s) 384, 563, 614, 759, 836, 1096
BlsI GCNGC 6 cut(s) 385, 564, 615, 760, 837, 1097
BmcAI AGTACT 3 cut(s) 851, 990, 1364
Bme1390I CCNGG 4 cut(s) 196, 203, 1090, 1953
Bme18I GGWCC 1 cut(s) 1602
BmeT110I CYCGRG 2 cut(s) 1223, 1528
BmgT120I GGNCC 4 cut(s) 198, 199, 235, 1602
BmiI GGNNCC 8 cut(s) 200, 485, 642, 712, 926, 1302, 1710, 1908
BmrFI CCNGG 4 cut(s) 196, 203, 1090, 1953
BmrI ACTGGG 1 cut(s) 1001
BmsI GCATC 5 cut(s) 532, 634, 792, 1285, 1465
BmtI GCTAGC 1 cut(s) 47
BmuI ACTGGG 1 cut(s) 1001
BpiI GAAGAC 1 cut(s) 1168
BplI GAGNNNNNCTC 2 cut(s) 487, 519
BpmI CTGGAG 2 cut(s) 178, 1772
Bpu10I CCTNAGC 1 cut(s) 148
Bpu14I TTCGAA 2 cut(s) 936, 1179
BpuEI CTTGAG 7 cut(s) 79, 139, 323, 362, 1139, 1155, 1296
BpuMI CCSGG 2 cut(s) 1090, 1953
Bsa29I ATCGAT 1 cut(s) 786
BsaAI YACGTR 2 cut(s) 358, 1581
BsaBI GATNNNNATC 1 cut(s) 689
BsaI GGTCTC 2 cut(s) 967, 1629
BsaJI CCNNGG 6 cut(s) 186, 195, 201, 1143, 1392, 1952
BsaWI WCCGGW 1 cut(s) 868
BsaXI ACNNNNNCTCC 2 cut(s) 1068, 1098
Bsc4I CCNNNNNNNGG 3 cut(s) 463, 1316, 1492
Bse118I RCCGGY 2 cut(s) 232, 415
Bse1I ACTGG 3 cut(s) 996, 1589, 2121
Bse3DI GCAATG 2 cut(s) 1578, 1773
Bse8I GATNNNNATC 1 cut(s) 689
BseAI TCCGGA 1 cut(s) 868
BseBI CCWGG 2 cut(s) 196, 203
BseCI ATCGAT 1 cut(s) 786
BseDI CCNNGG 6 cut(s) 186, 195, 201, 1143, 1392, 1952
BseGI GGATG 3 cut(s) 547, 598, 1822
BseJI GATNNNNATC 1 cut(s) 689
BseLI CCNNNNNNNGG 3 cut(s) 463, 1316, 1492
BseMI GCAATG 2 cut(s) 1578, 1773
BseMII CTCAG 7 cut(s) 162, 443, 978, 1305, 1420, 1483, 1968
BseNI ACTGG 3 cut(s) 996, 1589, 2121
BseRI GAGGAG 2 cut(s) 236, 419
BseSI GKGCMC 2 cut(s) 202, 713
BseX3I CGGCCG 1 cut(s) 2058
BseXI GCAGC 4 cut(s) 549, 625, 745, 1107
BseYI CCCAGC 1 cut(s) 1430
BsgI GTGCAG 1 cut(s) 34
Bsh1236I CGCG 1 cut(s) 2075
Bsh1285I CGRYCG 1 cut(s) 2061
BshFI GGCC 9 cut(s) 191, 200, 236, 521, 911, 1021, 1272, 1397, 2060
BshNI GGYRCC 2 cut(s) 710, 1300
BshVI ATCGAT 1 cut(s) 786
BsiEI CGRYCG 1 cut(s) 2061
BsiHKAI GWGCWC 2 cut(s) 1976, 2072
BsiHKCI CYCGRG 2 cut(s) 1223, 1528
BsiSI CCGG 8 cut(s) 233, 416, 457, 869, 1090, 1910, 1952, 2061
BslFI GGGAC 2 cut(s) 1207, 1310
BslI CCNNNNNNNGG 3 cut(s) 463, 1316, 1492
BsmAI GTCTC 5 cut(s) 494, 524, 899, 967, 1629
BsmBI CGTCTC 1 cut(s) 899
BsmFI GGGAC 2 cut(s) 1207, 1310
BsmI GAATGC 2 cut(s) 1031, 1163
BsnI GGCC 9 cut(s) 191, 200, 236, 521, 911, 1021, 1272, 1397, 2060
Bso31I GGTCTC 2 cut(s) 967, 1629
BsoBI CYCGRG 2 cut(s) 1223, 1528
Bsp119I TTCGAA 2 cut(s) 936, 1179
Bsp120I GGGCCC 1 cut(s) 198
Bsp1286I GDGCHC 4 cut(s) 202, 713, 1976, 2072
Bsp13I TCCGGA 1 cut(s) 868
Bsp19I CCATGG 2 cut(s) 186, 1392
BspACI CCGC 7 cut(s) 383, 739, 835, 1058, 1298, 2073, 2087
BspANI GGCC 9 cut(s) 191, 200, 236, 521, 911, 1021, 1272, 1397, 2060
BspCNI CTCAG 7 cut(s) 161, 444, 977, 1304, 1419, 1482, 1969
BspDI ATCGAT 1 cut(s) 786
BspEI TCCGGA 1 cut(s) 868
BspFNI CGCG 1 cut(s) 2075
BspLI GGNNCC 8 cut(s) 200, 485, 642, 712, 926, 1302, 1710, 1908
BspMAI CTGCAG 1 cut(s) 1506
BspOI GCTAGC 1 cut(s) 47
BspT104I TTCGAA 2 cut(s) 936, 1179
BspT107I GGYRCC 2 cut(s) 710, 1300
BspTI CTTAAG 2 cut(s) 853, 2030
BspTNI GGTCTC 2 cut(s) 967, 1629
BsrDI GCAATG 2 cut(s) 1578, 1773
BsrFI RCCGGY 2 cut(s) 232, 415
BsrI ACTGG 3 cut(s) 996, 1589, 2121
BssAI RCCGGY 2 cut(s) 232, 415
BssECI CCNNGG 6 cut(s) 186, 195, 201, 1143, 1392, 1952
BssSI CACGAG 1 cut(s) 1628
BssT1I CCWWGG 3 cut(s) 186, 1143, 1392
Bst2BI CACGAG 1 cut(s) 1628
Bst2UI CCWGG 2 cut(s) 196, 203
Bst4CI ACNGT 9 cut(s) 177, 365, 866, 1116, 1375, 1780, 1894, 1919, 2084
Bst6I CTCTTC 2 cut(s) 154, 808
BstAFI CTTAAG 2 cut(s) 853, 2030
BstBAI YACGTR 2 cut(s) 358, 1581
BstBI TTCGAA 2 cut(s) 936, 1179
BstC8I GCNNGC 4 cut(s) 45, 49, 413, 1161
BstDEI CTNAG 9 cut(s) 148, 452, 734, 964, 1291, 1366, 1406, 1469, 1977
BstDSI CCRYGG 2 cut(s) 186, 1392
BstF5I GGATG 3 cut(s) 547, 598, 1822
BstFNI CGCG 1 cut(s) 2075
BstHHI GCGC 2 cut(s) 244, 1876
BstMAI GTCTC 5 cut(s) 494, 524, 899, 967, 1629
BstMCI CGRYCG 1 cut(s) 2061
BstNI CCWGG 2 cut(s) 196, 203
BstNSI RCATGY 2 cut(s) 1135, 1690
BstSCI CCNGG 4 cut(s) 194, 201, 1088, 1951
BstSFI CTRYAG 4 cut(s) 173, 654, 1502, 1846
BstSLI GKGCMC 2 cut(s) 202, 713
BstUI CGCG 1 cut(s) 2075
BstV1I GCAGC 4 cut(s) 549, 625, 745, 1107
BstV2I GAAGAC 1 cut(s) 1168
BstX2I RGATCY 3 cut(s) 483, 640, 924
BstXI CCANNNNNNTGG 2 cut(s) 187, 202
BstYI RGATCY 3 cut(s) 483, 640, 924
BstZI CGGCCG 1 cut(s) 2058
Bsu15I ATCGAT 1 cut(s) 786
BsuI GTATCC 1 cut(s) 1835
BsuRI GGCC 9 cut(s) 191, 200, 236, 521, 911, 1021, 1272, 1397, 2060
BsuTUI ATCGAT 1 cut(s) 786
BtgI CCRYGG 2 cut(s) 186, 1392
BtsCI GGATG 3 cut(s) 547, 598, 1822
BtsI GCAGTG 2 cut(s) 951, 960
BtsIMutI CAGTG 5 cut(s) 951, 960, 1380, 1924, 2128
Cac8I GCNNGC 4 cut(s) 45, 49, 413, 1161
CaiI CAGNNNCTG 3 cut(s) 100, 1196, 1996
CfoI GCGC 2 cut(s) 244, 1876
Cfr10I RCCGGY 2 cut(s) 232, 415
Cfr13I GGNCC 4 cut(s) 198, 199, 235, 1602
ClaI ATCGAT 1 cut(s) 786
CseI GACGC 1 cut(s) 352
Csp6I GTAC 9 cut(s) 355, 478, 850, 989, 1301, 1342, 1363, 1582, 1915
CviQI GTAC 9 cut(s) 355, 478, 850, 989, 1301, 1342, 1363, 1582, 1915
DdeI CTNAG 9 cut(s) 148, 452, 734, 964, 1291, 1366, 1406, 1469, 1977
DrdI GACNNNNNNGTC 1 cut(s) 1013
DseDI GACNNNNNNGTC 1 cut(s) 1013
EaeI YGGCCR 4 cut(s) 909, 1019, 1395, 2058
EagI CGGCCG 1 cut(s) 2058
Eam1104I CTCTTC 2 cut(s) 154, 808
EarI CTCTTC 2 cut(s) 154, 808
EciI GGCGGA 1 cut(s) 754
Ecl136II GAGCTC 2 cut(s) 1974, 2070
EclXI CGGCCG 1 cut(s) 2058
Eco130I CCWWGG 3 cut(s) 186, 1143, 1392
Eco147I AGGCCT 1 cut(s) 521
Eco24I GRGCYC 3 cut(s) 202, 1976, 2072
Eco31I GGTCTC 2 cut(s) 967, 1629
Eco47I GGWCC 1 cut(s) 1602
Eco52I CGGCCG 1 cut(s) 2058
Eco53kI GAGCTC 2 cut(s) 1974, 2070
Eco57I CTGAAG 2 cut(s) 416, 1051
Eco88I CYCGRG 2 cut(s) 1223, 1528
EcoICRI GAGCTC 2 cut(s) 1974, 2070
EcoO109I RGGNCCY 2 cut(s) 198, 199
EcoRII CCWGG 2 cut(s) 194, 201
EcoT14I CCWWGG 3 cut(s) 186, 1143, 1392
EcoT22I ATGCAT 1 cut(s) 785
EcoT38I GRGCYC 3 cut(s) 202, 1976, 2072
ErhI CCWWGG 3 cut(s) 186, 1143, 1392
Esp3I CGTCTC 1 cut(s) 899
FalI AAGNNNNNCTT 2 cut(s) 549, 581
FaqI GGGAC 2 cut(s) 1207, 1310
FauNDI CATATG 1 cut(s) 398
FbaI TGATCA 4 cut(s) 472, 507, 679, 690
Fnu4HI GCNGC 6 cut(s) 384, 563, 614, 759, 836, 1096
FokI GGATG 3 cut(s) 554, 605, 1829
FriOI GRGCYC 3 cut(s) 202, 1976, 2072
Fsp4HI GCNGC 6 cut(s) 384, 563, 614, 759, 836, 1096
FspBI CTAG 8 cut(s) 44, 68, 755, 1127, 1443, 1619, 2046, 2109
GlaI GCGC 2 cut(s) 243, 1875
GluI GCNGC 6 cut(s) 384, 563, 614, 759, 836, 1096
GsaI CCCAGC 1 cut(s) 1434
GsuI CTGGAG 2 cut(s) 178, 1772
HaeIII GGCC 9 cut(s) 191, 200, 236, 521, 911, 1021, 1272, 1397, 2060
HapII CCGG 8 cut(s) 233, 416, 457, 869, 1090, 1910, 1952, 2061
HgaI GACGC 1 cut(s) 352
HhaI GCGC 2 cut(s) 244, 1876
Hin6I GCGC 2 cut(s) 242, 1874
HinP1I GCGC 2 cut(s) 242, 1874
HindIII AAGCTT 4 cut(s) 284, 1229, 1898, 2027
HpaII CCGG 8 cut(s) 233, 416, 457, 869, 1090, 1910, 1952, 2061
HphI GGTGA 7 cut(s) 430, 686, 700, 814, 1196, 1906, 2035
Hpy166II GTNNAC 1 cut(s) 361
Hpy8I GTNNAC 1 cut(s) 361
Hpy99I CGWCG 4 cut(s) 1460, 1894, 1966, 2106
HpyCH4III ACNGT 9 cut(s) 177, 365, 866, 1116, 1375, 1780, 1894, 1919, 2084
HpyCH4IV ACGT 2 cut(s) 357, 1580
HpyCH4V TGCA 7 cut(s) 51, 589, 613, 783, 1163, 1504, 1571
HpyF3I CTNAG 9 cut(s) 148, 452, 734, 964, 1291, 1366, 1406, 1469, 1977
HpySE526I ACGT 2 cut(s) 357, 1580
HspAI GCGC 2 cut(s) 242, 1874
Kpn2I TCCGGA 1 cut(s) 868
KpnI GGTACC 1 cut(s) 1304
Ksp22I TGATCA 4 cut(s) 472, 507, 679, 690
LmnI GCTCC 7 cut(s) 172, 249, 398, 1092, 1747, 2067, 2075
Lsp1109I GCAGC 4 cut(s) 549, 625, 745, 1107
LweI GCATC 5 cut(s) 532, 634, 792, 1285, 1465
MaeI CTAG 8 cut(s) 44, 68, 755, 1127, 1443, 1619, 2046, 2109
MaeII ACGT 2 cut(s) 357, 1580
MaeIII GTNAC 1 cut(s) 226
MflI RGATCY 3 cut(s) 483, 640, 924
MhlI GDGCHC 4 cut(s) 202, 713, 1976, 2072
MlsI TGGCCA 2 cut(s) 1021, 1397
MluNI TGGCCA 2 cut(s) 1021, 1397
MlyI GAGTC 6 cut(s) 278, 496, 1148, 1410, 1925, 1988
MmeI TCCRAC 4 cut(s) 699, 952, 1479, 2058
Mox20I TGGCCA 2 cut(s) 1021, 1397
Mph1103I ATGCAT 1 cut(s) 785
MroI TCCGGA 1 cut(s) 868
MroXI GAANNNNTTC 1 cut(s) 974
MscI TGGCCA 2 cut(s) 1021, 1397
MseI TTAA 5 cut(s) 123, 798, 854, 2031, 2091
MslI CAYNNNNRTG 2 cut(s) 185, 1058
Msp20I TGGCCA 2 cut(s) 1021, 1397
MspCI CTTAAG 2 cut(s) 853, 2030
MspI CCGG 8 cut(s) 233, 416, 457, 869, 1090, 1910, 1952, 2061
MspR9I CCNGG 4 cut(s) 196, 203, 1090, 1953
Mva1269I GAATGC 2 cut(s) 1031, 1163
MvaI CCWGG 2 cut(s) 196, 203
MvnI CGCG 1 cut(s) 2075
NciI CCSGG 2 cut(s) 1090, 1953
NcoI CCATGG 2 cut(s) 186, 1392
NdeI CATATG 1 cut(s) 398
NheI GCTAGC 1 cut(s) 43
NlaIV GGNNCC 8 cut(s) 200, 485, 642, 712, 926, 1302, 1710, 1908
NmuCI GTSAC 1 cut(s) 226
NsiI ATGCAT 1 cut(s) 785
NspI RCATGY 2 cut(s) 1135, 1690
NspV TTCGAA 2 cut(s) 936, 1179
PaeR7I CTCGAG 1 cut(s) 1223
PceI AGGCCT 1 cut(s) 521
PciI ACATGT 2 cut(s) 1131, 1686
PcsI WCGNNNNNNNCGW 2 cut(s) 1080, 1784
PctI GAATGC 2 cut(s) 1031, 1163
PdmI GAANNNNTTC 1 cut(s) 974
PflFI GACNNNGTC 1 cut(s) 2110
PflMI CCANNNNNTGG 1 cut(s) 1492
PkrI GCNGC 6 cut(s) 385, 564, 615, 760, 837, 1097
PleI GAGTC 6 cut(s) 277, 496, 1147, 1409, 1925, 1987
PpsI GAGTC 6 cut(s) 277, 496, 1147, 1409, 1925, 1987
Ppu21I YACGTR 2 cut(s) 358, 1581
PscI ACATGT 2 cut(s) 1131, 1686
Psp124BI GAGCTC 2 cut(s) 1976, 2072
Psp6I CCWGG 2 cut(s) 194, 201
PspFI CCCAGC 1 cut(s) 1430
PspGI CCWGG 2 cut(s) 194, 201
PspN4I GGNNCC 8 cut(s) 200, 485, 642, 712, 926, 1302, 1710, 1908
PspOMI GGGCCC 1 cut(s) 198
PspPI GGNCC 4 cut(s) 198, 199, 235, 1602
PsrI GAACNNNNNNTAC 2 cut(s) 1907, 1939
PstI CTGCAG 1 cut(s) 1506
PstNI CAGNNNCTG 3 cut(s) 100, 1196, 1996
PsuI RGATCY 3 cut(s) 483, 640, 924
PsyI GACNNNGTC 1 cut(s) 2110
RsaI GTAC 9 cut(s) 356, 479, 851, 990, 1302, 1343, 1364, 1583, 1916
RsaNI GTAC 9 cut(s) 355, 478, 850, 989, 1301, 1342, 1363, 1582, 1915
RseI CAYNNNNRTG 2 cut(s) 185, 1058
SacI GAGCTC 2 cut(s) 1976, 2072
SaqAI TTAA 5 cut(s) 123, 798, 854, 2031, 2091
SatI GCNGC 6 cut(s) 384, 563, 614, 759, 836, 1096
Sau96I GGNCC 4 cut(s) 198, 199, 235, 1602
ScaI AGTACT 3 cut(s) 851, 990, 1364
SchI GAGTC 6 cut(s) 278, 496, 1148, 1410, 1925, 1988
ScrFI CCNGG 4 cut(s) 196, 203, 1090, 1953
SduI GDGCHC 4 cut(s) 202, 713, 1976, 2072
SfaNI GCATC 5 cut(s) 532, 634, 792, 1285, 1465
SfcI CTRYAG 4 cut(s) 173, 654, 1502, 1846
SfiI GGCCNNNNNGGCC 1 cut(s) 197
Sfr274I CTCGAG 1 cut(s) 1223
SfuI TTCGAA 2 cut(s) 936, 1179
SinI GGWCC 1 cut(s) 1602
SlaI CTCGAG 1 cut(s) 1223
SmiMI CAYNNNNRTG 2 cut(s) 185, 1058
SseBI AGGCCT 1 cut(s) 521
SsiI CCGC 7 cut(s) 383, 739, 835, 1058, 1298, 2073, 2087
SspMI CTAG 8 cut(s) 44, 68, 755, 1127, 1443, 1619, 2046, 2109
SstI GAGCTC 2 cut(s) 1976, 2072
StuI AGGCCT 1 cut(s) 521
StyD4I CCNGG 4 cut(s) 194, 201, 1088, 1951
StyI CCWWGG 3 cut(s) 186, 1143, 1392
TaaI ACNGT 9 cut(s) 177, 365, 866, 1116, 1375, 1780, 1894, 1919, 2084
TaiI ACGT 2 cut(s) 360, 1583
TatI WGTACW 4 cut(s) 477, 849, 988, 1362
TauI GCSGC 2 cut(s) 386, 838
Tru1I TTAA 5 cut(s) 123, 798, 854, 2031, 2091
Tru9I TTAA 5 cut(s) 123, 798, 854, 2031, 2091
TscAI CASTG 5 cut(s) 951, 960, 1380, 1924, 2128
TseFI GTSAC 1 cut(s) 226
TseI GCWGC 4 cut(s) 562, 613, 758, 1095
Tsp45I GTSAC 1 cut(s) 226
TspDTI ATGAA 7 cut(s) 27, 341, 684, 1373, 1589, 1661, 1820
TspGWI ACGGA 1 cut(s) 2119
TspRI CASTG 5 cut(s) 951, 960, 1380, 1924, 2128
Tth111I GACNNNGTC 1 cut(s) 2110
Van91I CCANNNNNTGG 1 cut(s) 1492
Vha464I CTTAAG 2 cut(s) 853, 2030
VpaK11BI GGWCC 1 cut(s) 1602
XapI RAATTY 4 cut(s) 583, 898, 973, 1254
XbaI TCTAGA 1 cut(s) 1442
XceI RCATGY 2 cut(s) 1135, 1690
XhoI CTCGAG 1 cut(s) 1223
XmnI GAANNNNTTC 1 cut(s) 974
XspI CTAG 8 cut(s) 44, 68, 755, 1127, 1443, 1619, 2046, 2109
ZrmI AGTACT 3 cut(s) 851, 990, 1364
Zsp2I ATGCAT 1 cut(s) 785
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.