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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g01760 FvH4_1g01760 FvH4_1g01760 |
| malus_domestica | MD02G1013300.v1.1 MD15G1160100.v1.1 |
| prunus_persica | Prupe.7G255100_v2.0.a1 |
| pyrus_communis | pycom02g01240 pycom15g14400 |
| rosa_chinensis | RchiOBHm_Chr2g0086721 |
| rosa_laevigata | RLG00000015785 |
| rosa_multiflora | Rmu_sc0004626.1_g000002 |
| rosa_roxburghii | Rroxscaffold_2G00154250 |
| rosa_rugosa | Rorug01G0469200 |
| rosa_samantha | Rh2AG021200 Rh2BG021100 Rh2CG022000 Rh2DG021800 |
| rosa_wichuraiana | Rw2G001720 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 241 |
| AccI | GTMKAC | 1 cut(s) | 502 |
| AccII | CGCG | 2 cut(s) | 326, 1558 |
| AciI | CCGC | 9 cut(s) | 160, 403, 406, 416, 419, 540, 1220, 1613, 1616 |
| AclWI | GGATC | 5 cut(s) | 524, 697, 1110, 1756, 1769 |
| AcoI | YGGCCR | 1 cut(s) | 1108 |
| AcsI | RAATTY | 8 cut(s) | 120, 216, 252, 300, 796, 935, 1389, 1484 |
| AcuI | CTGAAG | 2 cut(s) | 669, 1274 |
| AdeI | CACNNNGTG | 1 cut(s) | 1437 |
| AfaI | GTAC | 1 cut(s) | 323 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1695, 1772 |
| AjiI | CACGTC | 2 cut(s) | 1434, 1471 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1446, 1478 |
| Alw21I | GWGCWC | 1 cut(s) | 594 |
| Alw26I | GTCTC | 5 cut(s) | 117, 521, 541, 1199, 1449 |
| AlwI | GGATC | 5 cut(s) | 524, 697, 1110, 1756, 1769 |
| Ama87I | CYCGRG | 1 cut(s) | 1765 |
| AoxI | GGCC | 2 cut(s) | 1108, 1283 |
| ApeKI | GCWGC | 8 cut(s) | 439, 463, 634, 644, 694, 848, 1312, 1526 |
| ApoI | RAATTY | 8 cut(s) | 120, 216, 252, 300, 796, 935, 1389, 1484 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 428, 460, 555, 587 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1484 |
| AspA2I | CCTAGG | 1 cut(s) | 1694 |
| AspLEI | GCGC | 3 cut(s) | 328, 1409, 1558 |
| AspS9I | GGNCC | 1 cut(s) | 1283 |
| AsuC2I | CCSGG | 3 cut(s) | 169, 1766, 1767 |
| AsuHPI | GGTGA | 6 cut(s) | 864, 1241, 1289, 1486, 1586, 1670 |
| AsuII | TTCGAA | 4 cut(s) | 284, 434, 800, 1133 |
| AvaI | CYCGRG | 1 cut(s) | 1765 |
| AvrII | CCTAGG | 1 cut(s) | 1694 |
| AxyI | CCTNAGG | 1 cut(s) | 388 |
| BalI | TGGCCA | 1 cut(s) | 1110 |
| BamHI | GGATCC | 1 cut(s) | 1761 |
| BanI | GGYRCC | 1 cut(s) | 241 |
| Bbv12I | GWGCWC | 1 cut(s) | 594 |
| BbvCI | CCTCAGC | 1 cut(s) | 657 |
| BbvI | GCAGC | 8 cut(s) | 426, 475, 646, 656, 681, 860, 1299, 1538 |
| BccI | CCATC | 5 cut(s) | 490, 1157, 1316, 1501, 1554 |
| BceAI | ACGGC | 2 cut(s) | 99, 1042 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 973, 1007 |
| BciVI | GTATCC | 1 cut(s) | 1556 |
| BclI | TGATCA | 1 cut(s) | 1675 |
| BcnI | CCSGG | 3 cut(s) | 169, 1766, 1767 |
| BcoDI | GTCTC | 5 cut(s) | 117, 521, 541, 1199, 1449 |
| BfaI | CTAG | 3 cut(s) | 87, 95, 1695 |
| BfmI | CTRYAG | 1 cut(s) | 440 |
| BfuI | GTATCC | 1 cut(s) | 1556 |
| BlnI | CCTAGG | 1 cut(s) | 1694 |
| Bme1390I | CCNGG | 3 cut(s) | 169, 1766, 1767 |
| BmeT110I | CYCGRG | 1 cut(s) | 1765 |
| BmgBI | CACGTC | 2 cut(s) | 1434, 1471 |
| BmgT120I | GGNCC | 1 cut(s) | 1283 |
| BmiI | GGNNCC | 3 cut(s) | 243, 1014, 1763 |
| BmrFI | CCNGG | 3 cut(s) | 169, 1766, 1767 |
| BoxI | GACNNNNGTC | 1 cut(s) | 533 |
| BpmI | CTGGAG | 1 cut(s) | 564 |
| Bpu10I | CCTNAGC | 2 cut(s) | 648, 657 |
| Bpu14I | TTCGAA | 4 cut(s) | 284, 434, 800, 1133 |
| BpuEI | CTTGAG | 2 cut(s) | 440, 1537 |
| BpuMI | CCSGG | 3 cut(s) | 169, 1766, 1767 |
| BsaBI | GATNNNNATC | 1 cut(s) | 868 |
| BsaI | GGTCTC | 2 cut(s) | 521, 541 |
| BsaJI | CCNNGG | 5 cut(s) | 531, 1272, 1694, 1765, 1766 |
| BsaWI | WCCGGW | 1 cut(s) | 1714 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 645, 675, 1446, 1476 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1695, 1772 |
| Bse118I | RCCGGY | 1 cut(s) | 601 |
| Bse1I | ACTGG | 1 cut(s) | 581 |
| Bse21I | CCTNAGG | 1 cut(s) | 388 |
| Bse3DI | GCAATG | 1 cut(s) | 1157 |
| Bse8I | GATNNNNATC | 1 cut(s) | 868 |
| BseDI | CCNNGG | 5 cut(s) | 531, 1272, 1694, 1765, 1766 |
| BseGI | GGATG | 1 cut(s) | 1327 |
| BseJI | GATNNNNATC | 1 cut(s) | 868 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1695, 1772 |
| BseMI | GCAATG | 1 cut(s) | 1157 |
| BseMII | CTCAG | 7 cut(s) | 516, 602, 648, 662, 701, 1566, 1694 |
| BseNI | ACTGG | 1 cut(s) | 581 |
| BseRI | GAGGAG | 3 cut(s) | 1063, 1198, 1598 |
| BseXI | GCAGC | 8 cut(s) | 426, 475, 646, 656, 681, 860, 1299, 1538 |
| BsgI | GTGCAG | 1 cut(s) | 1056 |
| Bsh1236I | CGCG | 2 cut(s) | 326, 1558 |
| BshFI | GGCC | 2 cut(s) | 1110, 1285 |
| BshNI | GGYRCC | 1 cut(s) | 241 |
| BsiHKAI | GWGCWC | 1 cut(s) | 594 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1765 |
| BsiSI | CCGG | 4 cut(s) | 169, 602, 1715, 1766 |
| BsiWI | CGTACG | 1 cut(s) | 321 |
| BslFI | GGGAC | 3 cut(s) | 629, 1107, 1247 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1695, 1772 |
| BsmAI | GTCTC | 5 cut(s) | 117, 521, 541, 1199, 1449 |
| BsmBI | CGTCTC | 2 cut(s) | 117, 1449 |
| BsmFI | GGGAC | 3 cut(s) | 629, 1107, 1247 |
| BsmI | GAATGC | 1 cut(s) | 724 |
| BsnI | GGCC | 2 cut(s) | 1110, 1285 |
| Bso31I | GGTCTC | 2 cut(s) | 521, 541 |
| BsoBI | CYCGRG | 1 cut(s) | 1765 |
| Bsp119I | TTCGAA | 4 cut(s) | 284, 434, 800, 1133 |
| Bsp1286I | GDGCHC | 1 cut(s) | 594 |
| Bsp19I | CCATGG | 1 cut(s) | 1272 |
| BspACI | CCGC | 9 cut(s) | 160, 403, 406, 416, 419, 540, 1220, 1613, 1616 |
| BspANI | GGCC | 2 cut(s) | 1110, 1285 |
| BspCNI | CTCAG | 7 cut(s) | 517, 603, 649, 661, 702, 1565, 1695 |
| BspFNI | CGCG | 2 cut(s) | 326, 1558 |
| BspLI | GGNNCC | 3 cut(s) | 243, 1014, 1763 |
| BspMAI | CTGCAG | 1 cut(s) | 444 |
| BspPI | GGATC | 5 cut(s) | 524, 697, 1110, 1756, 1769 |
| BspQI | GCTCTTC | 1 cut(s) | 958 |
| BspT104I | TTCGAA | 4 cut(s) | 284, 434, 800, 1133 |
| BspT107I | GGYRCC | 1 cut(s) | 241 |
| BspTNI | GGTCTC | 2 cut(s) | 521, 541 |
| BsrDI | GCAATG | 1 cut(s) | 1157 |
| BsrFI | RCCGGY | 1 cut(s) | 601 |
| BsrI | ACTGG | 1 cut(s) | 581 |
| BssAI | RCCGGY | 1 cut(s) | 601 |
| BssECI | CCNNGG | 5 cut(s) | 531, 1272, 1694, 1765, 1766 |
| BssT1I | CCWWGG | 2 cut(s) | 1272, 1694 |
| Bst4CI | ACNGT | 5 cut(s) | 7, 103, 141, 1383, 1544 |
| Bst6I | CTCTTC | 3 cut(s) | 958, 1175, 1191 |
| BstBI | TTCGAA | 4 cut(s) | 284, 434, 800, 1133 |
| BstC8I | GCNNGC | 4 cut(s) | 414, 699, 770, 1004 |
| BstDSI | CCRYGG | 1 cut(s) | 1272 |
| BstF5I | GGATG | 1 cut(s) | 1327 |
| BstFNI | CGCG | 2 cut(s) | 326, 1558 |
| BstHHI | GCGC | 3 cut(s) | 328, 1409, 1558 |
| BstMAI | GTCTC | 5 cut(s) | 117, 521, 541, 1199, 1449 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 409, 436, 598, 631, 653 |
| BstNSI | RCATGY | 1 cut(s) | 1499 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 533 |
| BstSCI | CCNGG | 3 cut(s) | 167, 1764, 1765 |
| BstSFI | CTRYAG | 1 cut(s) | 440 |
| BstUI | CGCG | 2 cut(s) | 326, 1558 |
| BstV1I | GCAGC | 8 cut(s) | 426, 475, 646, 656, 681, 860, 1299, 1538 |
| BstX2I | RGATCY | 2 cut(s) | 516, 1761 |
| BstYI | RGATCY | 2 cut(s) | 516, 1761 |
| Bsu36I | CCTNAGG | 1 cut(s) | 388 |
| BsuI | GTATCC | 1 cut(s) | 1556 |
| BsuRI | GGCC | 2 cut(s) | 1110, 1285 |
| BtgI | CCRYGG | 1 cut(s) | 1272 |
| BtgZI | GCGATG | 1 cut(s) | 1573 |
| BtrI | CACGTC | 2 cut(s) | 1434, 1471 |
| BtsCI | GGATG | 1 cut(s) | 1327 |
| BtsI | GCAGTG | 2 cut(s) | 740, 834 |
| BtsIMutI | CAGTG | 3 cut(s) | 588, 740, 834 |
| Cac8I | GCNNGC | 4 cut(s) | 414, 699, 770, 1004 |
| CfoI | GCGC | 3 cut(s) | 328, 1409, 1558 |
| Cfr10I | RCCGGY | 1 cut(s) | 601 |
| Cfr13I | GGNCC | 1 cut(s) | 1283 |
| Cfr9I | CCCGGG | 1 cut(s) | 1765 |
| Csp6I | GTAC | 1 cut(s) | 322 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 716, 751 |
| CviAII | CATG | 8 cut(s) | 962, 991, 1106, 1273, 1496, 1619, 1652, 1772 |
| CviQI | GTAC | 1 cut(s) | 322 |
| DraIII | CACNNNGTG | 1 cut(s) | 1437 |
| EaeI | YGGCCR | 1 cut(s) | 1108 |
| Eam1104I | CTCTTC | 3 cut(s) | 958, 1175, 1191 |
| EarI | CTCTTC | 3 cut(s) | 958, 1175, 1191 |
| EciI | GGCGGA | 2 cut(s) | 434, 1602 |
| Eco130I | CCWWGG | 2 cut(s) | 1272, 1694 |
| Eco31I | GGTCTC | 2 cut(s) | 521, 541 |
| Eco57I | CTGAAG | 2 cut(s) | 669, 1274 |
| Eco81I | CCTNAGG | 1 cut(s) | 388 |
| Eco88I | CYCGRG | 1 cut(s) | 1765 |
| EcoRI | GAATTC | 2 cut(s) | 1389, 1484 |
| EcoT14I | CCWWGG | 2 cut(s) | 1272, 1694 |
| ErhI | CCWWGG | 2 cut(s) | 1272, 1694 |
| Esp3I | CGTCTC | 2 cut(s) | 117, 1449 |
| FaeI | CATG | 8 cut(s) | 965, 994, 1109, 1276, 1499, 1622, 1655, 1775 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 35, 67 |
| FaqI | GGGAC | 3 cut(s) | 629, 1107, 1247 |
| FatI | CATG | 8 cut(s) | 961, 990, 1105, 1272, 1495, 1618, 1651, 1771 |
| FbaI | TGATCA | 1 cut(s) | 1675 |
| FblI | GTMKAC | 1 cut(s) | 502 |
| FokI | GGATG | 1 cut(s) | 1334 |
| FspBI | CTAG | 3 cut(s) | 87, 95, 1695 |
| GlaI | GCGC | 3 cut(s) | 327, 1408, 1557 |
| GsuI | CTGGAG | 1 cut(s) | 564 |
| HaeIII | GGCC | 2 cut(s) | 1110, 1285 |
| HapII | CCGG | 4 cut(s) | 169, 602, 1715, 1766 |
| HhaI | GCGC | 3 cut(s) | 328, 1409, 1558 |
| Hin1II | CATG | 8 cut(s) | 965, 994, 1109, 1276, 1499, 1622, 1655, 1775 |
| Hin6I | GCGC | 3 cut(s) | 326, 1407, 1556 |
| HinP1I | GCGC | 3 cut(s) | 326, 1407, 1556 |
| HindIII | AAGCTT | 4 cut(s) | 428, 1000, 1256, 1719 |
| HpaII | CCGG | 4 cut(s) | 169, 602, 1715, 1766 |
| HphI | GGTGA | 6 cut(s) | 864, 1241, 1289, 1486, 1586, 1670 |
| Hpy166II | GTNNAC | 2 cut(s) | 503, 1249 |
| Hpy188III | TCNNGA | 7 cut(s) | 290, 397, 687, 728, 1171, 1386, 1466 |
| Hpy8I | GTNNAC | 2 cut(s) | 503, 1249 |
| Hpy99I | CGWCG | 3 cut(s) | 575, 985, 1438 |
| HpyAV | CCTTC | 7 cut(s) | 255, 506, 748, 1140, 1274, 1341, 1369 |
| HpyCH4III | ACNGT | 5 cut(s) | 7, 103, 141, 1383, 1544 |
| HpyCH4IV | ACGT | 4 cut(s) | 62, 1433, 1458, 1470 |
| HpyCH4V | TGCA | 8 cut(s) | 11, 372, 442, 553, 634, 722, 1037, 1526 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 409, 436, 598, 631, 653 |
| HpySE526I | ACGT | 4 cut(s) | 62, 1433, 1458, 1470 |
| Hsp92II | CATG | 8 cut(s) | 965, 994, 1109, 1276, 1499, 1622, 1655, 1775 |
| HspAI | GCGC | 3 cut(s) | 326, 1407, 1556 |
| Ksp22I | TGATCA | 1 cut(s) | 1675 |
| LguI | GCTCTTC | 1 cut(s) | 958 |
| LmnI | GCTCC | 5 cut(s) | 421, 589, 653, 1492, 1615 |
| Lsp1109I | GCAGC | 8 cut(s) | 426, 475, 646, 656, 681, 860, 1299, 1538 |
| MaeI | CTAG | 3 cut(s) | 87, 95, 1695 |
| MaeII | ACGT | 4 cut(s) | 62, 1433, 1458, 1470 |
| MaeIII | GTNAC | 4 cut(s) | 97, 1187, 1564, 1592 |
| MfeI | CAATTG | 1 cut(s) | 183 |
| MflI | RGATCY | 2 cut(s) | 516, 1761 |
| MhlI | GDGCHC | 1 cut(s) | 594 |
| MlsI | TGGCCA | 1 cut(s) | 1110 |
| MluNI | TGGCCA | 1 cut(s) | 1110 |
| MlyI | GAGTC | 4 cut(s) | 347, 464, 920, 1184 |
| MmeI | TCCRAC | 1 cut(s) | 426 |
| Mox20I | TGGCCA | 1 cut(s) | 1110 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1484 |
| MscI | TGGCCA | 1 cut(s) | 1110 |
| MseI | TTAA | 2 cut(s) | 143, 266 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1116 |
| Msp20I | TGGCCA | 1 cut(s) | 1110 |
| MspA1I | CMGCKG | 1 cut(s) | 416 |
| MspI | CCGG | 4 cut(s) | 169, 602, 1715, 1766 |
| MspR9I | CCNGG | 3 cut(s) | 169, 1766, 1767 |
| MunI | CAATTG | 1 cut(s) | 183 |
| Mva1269I | GAATGC | 1 cut(s) | 724 |
| MvnI | CGCG | 2 cut(s) | 326, 1558 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 409, 436, 598, 631, 653 |
| NciI | CCSGG | 3 cut(s) | 169, 1766, 1767 |
| NcoI | CCATGG | 1 cut(s) | 1272 |
| NlaIII | CATG | 8 cut(s) | 965, 994, 1109, 1276, 1499, 1622, 1655, 1775 |
| NlaIV | GGNNCC | 3 cut(s) | 243, 1014, 1763 |
| NmeAIII | GCCGAG | 1 cut(s) | 803 |
| NmuCI | GTSAC | 3 cut(s) | 97, 1187, 1592 |
| NspI | RCATGY | 1 cut(s) | 1499 |
| NspV | TTCGAA | 4 cut(s) | 284, 434, 800, 1133 |
| PciSI | GCTCTTC | 1 cut(s) | 958 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 567, 698, 921, 1139 |
| PctI | GAATGC | 1 cut(s) | 724 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1484 |
| PfeI | GAWTC | 8 cut(s) | 286, 985, 1066, 1167, 1428, 1738, 1744, 1750 |
| Pfl23II | CGTACG | 1 cut(s) | 321 |
| PfoI | TCCNGGA | 1 cut(s) | 167 |
| PleI | GAGTC | 4 cut(s) | 347, 464, 920, 1184 |
| PpsI | GAGTC | 4 cut(s) | 347, 464, 920, 1184 |
| PshAI | GACNNNNGTC | 1 cut(s) | 533 |
| PspLI | CGTACG | 1 cut(s) | 321 |
| PspN4I | GGNNCC | 3 cut(s) | 243, 1014, 1763 |
| PspPI | GGNCC | 1 cut(s) | 1283 |
| PstI | CTGCAG | 1 cut(s) | 444 |
| PsuI | RGATCY | 2 cut(s) | 516, 1761 |
| RsaI | GTAC | 1 cut(s) | 323 |
| RsaNI | GTAC | 1 cut(s) | 322 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1116 |
| SapI | GCTCTTC | 1 cut(s) | 958 |
| SaqAI | TTAA | 2 cut(s) | 143, 266 |
| Sau96I | GGNCC | 1 cut(s) | 1283 |
| SchI | GAGTC | 4 cut(s) | 347, 464, 920, 1184 |
| ScrFI | CCNGG | 3 cut(s) | 169, 1766, 1767 |
| SduI | GDGCHC | 1 cut(s) | 594 |
| SfcI | CTRYAG | 1 cut(s) | 440 |
| SfuI | TTCGAA | 4 cut(s) | 284, 434, 800, 1133 |
| SmaI | CCCGGG | 1 cut(s) | 1767 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1116 |
| SmlI | CTYRAG | 2 cut(s) | 455, 1516 |
| SmoI | CTYRAG | 2 cut(s) | 455, 1516 |
| SsiI | CCGC | 9 cut(s) | 160, 403, 406, 416, 419, 540, 1220, 1613, 1616 |
| SspI | AATATT | 1 cut(s) | 176 |
| SspMI | CTAG | 3 cut(s) | 87, 95, 1695 |
| StyD4I | CCNGG | 3 cut(s) | 167, 1764, 1765 |
| StyI | CCWWGG | 2 cut(s) | 1272, 1694 |
| TaaI | ACNGT | 5 cut(s) | 7, 103, 141, 1383, 1544 |
| TaiI | ACGT | 4 cut(s) | 65, 1436, 1461, 1473 |
| TaqII | GACCGA | 1 cut(s) | 545 |
| TauI | GCSGC | 4 cut(s) | 406, 419, 1222, 1618 |
| TfiI | GAWTC | 8 cut(s) | 286, 985, 1066, 1167, 1428, 1738, 1744, 1750 |
| Tru1I | TTAA | 2 cut(s) | 143, 266 |
| Tru9I | TTAA | 2 cut(s) | 143, 266 |
| TscAI | CASTG | 3 cut(s) | 588, 740, 834 |
| TseFI | GTSAC | 3 cut(s) | 97, 1187, 1592 |
| TseI | GCWGC | 8 cut(s) | 439, 463, 634, 644, 694, 848, 1312, 1526 |
| Tsp45I | GTSAC | 3 cut(s) | 97, 1187, 1592 |
| TspDTI | ATGAA | 6 cut(s) | 503, 978, 1034, 1134, 1333, 1668 |
| TspGWI | ACGGA | 1 cut(s) | 1203 |
| TspMI | CCCGGG | 1 cut(s) | 1765 |
| TspRI | CASTG | 3 cut(s) | 588, 740, 834 |
| XapI | RAATTY | 8 cut(s) | 120, 216, 252, 300, 796, 935, 1389, 1484 |
| XceI | RCATGY | 1 cut(s) | 1499 |
| XmaI | CCCGGG | 1 cut(s) | 1765 |
| XmaJI | CCTAGG | 1 cut(s) | 1694 |
| XmiI | GTMKAC | 1 cut(s) | 502 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1484 |
| XspI | CTAG | 3 cut(s) | 87, 95, 1695 |