pycom15g19760

CAAX amino terminal protease family protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
OG0002247
Physical Location & Seq
Forward (+)
14163564 .. 14165493
1930 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1149 bp
ATGTTTGAGGAGGCTGAGAAAAACCAAAGTAACATTGTCACAAGTCTTGCTGAGAAAGCCATGTCAGTTGCTGCTCCCGTGGTACCCACCAAGGAAGATGGTGAAGTGGACCAAGAAGGATTAGTCACAATGTTGACAGATTTGGGACAAAAGGGTGGCATGTTGAGGTTAGTTGGAAAAGCTGCTTTGCTTTGGGGTGGTCTACGTGGTGCAATGAGTTTGACTGACAAGCTTATCCAATTTCTTGATATAGCTGAGCGTCCCTTAATCCAGAGGATTTTTGGGTTTGTCGGTATGGTTCTTGTTTTGTGGTCACCAATTGTTGTTCCACTACTTCCATCATTTTTGCAAAGCTGGACAACCAATACATCCTCTAGAATTGCTGAACTTGCTTGCATTGTTGGCCTCTACACGGCTTTTATGATACTTGTTGTGATATGGGGCAAAAGAATACGTGGATATGAAAATCCTCTTCACAGATATGGGCTAGATTTAACGTCATTGCCAAAGTTAGGTGATTTTTTGAAGGGCTTGGTTGGTGGAGTTGCCCTTGTTTTGTCAATACACTCAGTAAGAGCACTACTTGACTCTGCGAATCTCTCTTGGCCCTCGACTCCATCTTCTTTGGATGCTGTCTCACAGCTCAAATTGTGTACGAAAGGGCTTGTGATGGTTGGTCAAGGAGTTATAGTAGCTACTGGTATTGCTCTTGTGGAAGAATTGCTTTTCAGGGCATGGCTGCCCCAAGAAATTGCTGCAGATCTTGGATATCATCGAGGAATAATTATATCAGGACTTGCGTTCGCTTTATCCCAGAGGTCTCCGCTATCAACACCAGGTCTATGGCTTCTATCTTTGAGTTTAGCAGGTGCTCGGCAAAGAAATGAAGGCAGCCCTTCCATACCAATTGGGTTGCGTGCAGGAATTATCGCTTCAAGTTTCATCATACAGAAGGGTGGCTTCCTGACCTACCGGGGTAACTTTCCTCCTTGGCTTATGGGGACACAGTCATTCCAACCGTTTAGTGGGCTAATTGGTTTTGCATTTACCTTAGTTTTAGCACTAGCTCTGTACCCTACACAGCCTCTTCGTGAAGAGAATGCAGAAAGGACTACTGAAGAATTTAAGAAACAGCATGCTGGTGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Abi

Protein Analysis

383

Amino Acids

41.33

Weight (kDa)

8.48

Isoelectric Point (pI)

38.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rce1-like PF02517 227 - 306 3.9e-06 Type II CAAX prenyl endopeptidase Rce1-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 857
Acc36I ACCTGC 1 cut(s) 857
Acc65I GGTACC 1 cut(s) 82
AccB1I GGYRCC 1 cut(s) 82
AccI GTMKAC 1 cut(s) 202
AciI CCGC 1 cut(s) 824
AcsI RAATTY 1 cut(s) 1121
AcuI CTGAAG 1 cut(s) 1137
AfaI GTAC 3 cut(s) 84, 655, 1073
AfiI CCNNNNNNNGG 3 cut(s) 412, 512, 1025
AgsI TTSAA 2 cut(s) 526, 936
AjnI CCWGG 1 cut(s) 835
AluBI AGCT 7 cut(s) 182, 232, 254, 354, 643, 695, 1067
AluI AGCT 7 cut(s) 182, 232, 254, 354, 643, 695, 1067
Alw21I GWGCWC 2 cut(s) 580, 874
Alw26I GTCTC 2 cut(s) 640, 825
AlwNI CAGNNNCTG 1 cut(s) 71
AoxI GGCC 2 cut(s) 403, 605
ApeKI GCWGC 5 cut(s) 71, 182, 739, 755, 891
ApoI RAATTY 1 cut(s) 1121
Asp718I GGTACC 1 cut(s) 82
AspS9I GGNCC 2 cut(s) 109, 606
AsuC2I CCSGG 1 cut(s) 974
AsuHPI GGTGA 3 cut(s) 113, 306, 527
AvaII GGWCC 1 cut(s) 109
BanI GGYRCC 1 cut(s) 82
Bbv12I GWGCWC 2 cut(s) 580, 874
BbvI GCAGC 5 cut(s) 58, 169, 726, 742, 903
BccI CCATC 4 cut(s) 92, 346, 625, 664
BceAI ACGGC 1 cut(s) 429
BciT130I CCWGG 1 cut(s) 837
BcnI CCSGG 1 cut(s) 974
BcoDI GTCTC 2 cut(s) 640, 825
BfaI CTAG 3 cut(s) 375, 488, 1064
BfmI CTRYAG 1 cut(s) 756
BfuAI ACCTGC 1 cut(s) 857
BglII AGATCT 1 cut(s) 760
BisI GCNGC 5 cut(s) 72, 183, 740, 756, 892
BlpI GCTNAGC 1 cut(s) 255
BlsI GCNGC 5 cut(s) 73, 184, 741, 757, 893
Bme1390I CCNGG 2 cut(s) 837, 974
Bme18I GGWCC 1 cut(s) 109
BmgT120I GGNCC 2 cut(s) 109, 606
BmiI GGNNCC 1 cut(s) 84
BmrFI CCNGG 2 cut(s) 837, 974
BmsI GCATC 1 cut(s) 619
Bpu1102I GCTNAGC 1 cut(s) 255
BpuMI CCSGG 1 cut(s) 974
BsaAI YACGTR 2 cut(s) 206, 455
BsaI GGTCTC 1 cut(s) 825
BsaJI CCNNGG 4 cut(s) 78, 90, 973, 989
BsaXI ACNNNNNCTCC 2 cut(s) 675, 705
Bsc4I CCNNNNNNNGG 3 cut(s) 412, 512, 1025
Bse1I ACTGG 1 cut(s) 703
Bse3DI GCAATG 2 cut(s) 219, 500
BseBI CCWGG 1 cut(s) 837
BseDI CCNNGG 4 cut(s) 78, 90, 973, 989
BseGI GGATG 2 cut(s) 368, 634
BseLI CCNNNNNNNGG 3 cut(s) 412, 512, 1025
BseMI GCAATG 2 cut(s) 219, 500
BseMII CTCAG 4 cut(s) 6, 42, 246, 582
BseNI ACTGG 1 cut(s) 703
BseRI GAGGAG 1 cut(s) 23
BseXI GCAGC 5 cut(s) 58, 169, 726, 742, 903
BsgI GTGCAG 1 cut(s) 939
BshFI GGCC 2 cut(s) 405, 607
BshNI GGYRCC 1 cut(s) 82
BsiHKAI GWGCWC 2 cut(s) 580, 874
BsiSI CCGG 1 cut(s) 973
BslFI GGGAC 3 cut(s) 159, 246, 1015
BslI CCNNNNNNNGG 3 cut(s) 412, 512, 1025
BsmAI GTCTC 2 cut(s) 640, 825
BsmFI GGGAC 3 cut(s) 159, 246, 1015
BsmI GAATGC 1 cut(s) 1105
BsnI GGCC 2 cut(s) 405, 607
Bso31I GGTCTC 1 cut(s) 825
Bsp1286I GDGCHC 2 cut(s) 580, 874
Bsp143I GATC 1 cut(s) 760
Bsp1720I GCTNAGC 1 cut(s) 255
BspACI CCGC 1 cut(s) 824
BspANI GGCC 2 cut(s) 405, 607
BspCNI CTCAG 4 cut(s) 7, 43, 247, 581
BspLI GGNNCC 1 cut(s) 84
BspMAI CTGCAG 1 cut(s) 760
BspMI ACCTGC 1 cut(s) 857
BspT107I GGYRCC 1 cut(s) 82
BspTNI GGTCTC 1 cut(s) 825
BsrDI GCAATG 2 cut(s) 219, 500
BsrI ACTGG 1 cut(s) 703
BssECI CCNNGG 4 cut(s) 78, 90, 973, 989
BssMI GATC 1 cut(s) 760
BssT1I CCWWGG 2 cut(s) 90, 989
Bst2UI CCWGG 1 cut(s) 837
Bst4CI ACNGT 2 cut(s) 1008, 1020
Bst6I CTCTTC 3 cut(s) 477, 1089, 1092
BstBAI YACGTR 2 cut(s) 206, 455
BstC8I GCNNGC 3 cut(s) 394, 918, 1137
BstDEI CTNAG 5 cut(s) 15, 51, 255, 568, 1051
BstDSI CCRYGG 1 cut(s) 78
BstEII GGTNACC 1 cut(s) 312
BstF5I GGATG 2 cut(s) 368, 634
BstKTI GATC 1 cut(s) 763
BstMAI GTCTC 2 cut(s) 640, 825
BstMBI GATC 1 cut(s) 760
BstMWI GCNNNNNNNGC 3 cut(s) 56, 389, 402
BstNI CCWGG 1 cut(s) 837
BstNSI RCATGY 2 cut(s) 163, 1139
BstPI GGTNACC 1 cut(s) 312
BstSCI CCNGG 2 cut(s) 835, 972
BstSFI CTRYAG 1 cut(s) 756
BstV1I GCAGC 5 cut(s) 58, 169, 726, 742, 903
BstX2I RGATCY 1 cut(s) 760
BstXI CCANNNNNNTGG 1 cut(s) 843
BstYI RGATCY 1 cut(s) 760
BsuRI GGCC 2 cut(s) 405, 607
BtgI CCRYGG 1 cut(s) 78
BtsCI GGATG 2 cut(s) 368, 634
BveI ACCTGC 1 cut(s) 857
Cac8I GCNNGC 3 cut(s) 394, 918, 1137
CaiI CAGNNNCTG 1 cut(s) 71
Cfr13I GGNCC 2 cut(s) 109, 606
CseI GACGC 1 cut(s) 248
CsiI ACCWGGT 1 cut(s) 835
Csp6I GTAC 3 cut(s) 83, 654, 1072
CviAII CATG 4 cut(s) 61, 160, 735, 1136
CviQI GTAC 3 cut(s) 83, 654, 1072
DdeI CTNAG 5 cut(s) 15, 51, 255, 568, 1051
DpnI GATC 1 cut(s) 762
DpnII GATC 1 cut(s) 760
Eam1104I CTCTTC 3 cut(s) 477, 1089, 1092
EarI CTCTTC 3 cut(s) 477, 1089, 1092
Eco130I CCWWGG 2 cut(s) 90, 989
Eco31I GGTCTC 1 cut(s) 825
Eco32I GATATC 1 cut(s) 770
Eco47I GGWCC 1 cut(s) 109
Eco57I CTGAAG 1 cut(s) 1137
Eco91I GGTNACC 1 cut(s) 312
EcoO65I GGTNACC 1 cut(s) 312
EcoRII CCWGG 1 cut(s) 835
EcoRV GATATC 1 cut(s) 770
EcoT14I CCWWGG 2 cut(s) 90, 989
ErhI CCWWGG 2 cut(s) 90, 989
FaeI CATG 4 cut(s) 64, 163, 738, 1139
FalI AAGNNNNNCTT 4 cut(s) 708, 740, 944, 976
FaqI GGGAC 3 cut(s) 159, 246, 1015
FatI CATG 4 cut(s) 60, 159, 734, 1135
FblI GTMKAC 1 cut(s) 202
Fnu4HI GCNGC 5 cut(s) 72, 183, 740, 756, 892
FokI GGATG 2 cut(s) 355, 641
Fsp4HI GCNGC 5 cut(s) 72, 183, 740, 756, 892
FspBI CTAG 3 cut(s) 375, 488, 1064
GluI GCNGC 5 cut(s) 72, 183, 740, 756, 892
HaeIII GGCC 2 cut(s) 405, 607
HapII CCGG 1 cut(s) 973
HgaI GACGC 1 cut(s) 248
Hin1II CATG 4 cut(s) 64, 163, 738, 1139
HincII GTYRAC 1 cut(s) 135
HindII GTYRAC 1 cut(s) 135
HindIII AAGCTT 1 cut(s) 230
HinfI GANTC 3 cut(s) 587, 595, 613
HpaII CCGG 1 cut(s) 973
HphI GGTGA 3 cut(s) 113, 306, 527
Hpy166II GTNNAC 4 cut(s) 109, 135, 203, 654
Hpy188III TCNNGA 6 cut(s) 245, 271, 375, 792, 964, 1091
Hpy8I GTNNAC 4 cut(s) 109, 135, 203, 654
HpyAV CCTTC 5 cut(s) 110, 520, 881, 906, 946
HpyCH4III ACNGT 2 cut(s) 1008, 1020
HpyCH4IV ACGT 3 cut(s) 205, 454, 497
HpyCH4V TGCA 7 cut(s) 212, 349, 396, 758, 920, 1043, 1103
HpyF10VI GCNNNNNNNGC 3 cut(s) 56, 389, 402
HpyF3I CTNAG 5 cut(s) 15, 51, 255, 568, 1051
HpySE526I ACGT 3 cut(s) 205, 454, 497
Hsp92II CATG 4 cut(s) 64, 163, 738, 1139
KpnI GGTACC 1 cut(s) 86
Kzo9I GATC 1 cut(s) 760
LmnI GCTCC 1 cut(s) 79
Lsp1109I GCAGC 5 cut(s) 58, 169, 726, 742, 903
LweI GCATC 1 cut(s) 619
MabI ACCWGGT 1 cut(s) 835
MaeI CTAG 3 cut(s) 375, 488, 1064
MaeII ACGT 3 cut(s) 205, 454, 497
MaeIII GTNAC 5 cut(s) 29, 37, 124, 312, 977
MalI GATC 1 cut(s) 762
MboI GATC 1 cut(s) 760
MboII GAAGA 7 cut(s) 107, 464, 612, 728, 1079, 1106, 1130
MfeI CAATTG 2 cut(s) 318, 906
MflI RGATCY 1 cut(s) 760
MhlI GDGCHC 2 cut(s) 580, 874
MlyI GAGTC 2 cut(s) 581, 607
MmeI TCCRAC 2 cut(s) 154, 1039
MseI TTAA 3 cut(s) 266, 494, 1125
MslI CAYNNNNRTG 2 cut(s) 480, 1140
MspI CCGG 1 cut(s) 973
MspR9I CCNGG 2 cut(s) 837, 974
MunI CAATTG 2 cut(s) 318, 906
Mva1269I GAATGC 1 cut(s) 1105
MvaI CCWGG 1 cut(s) 837
MwoI GCNNNNNNNGC 3 cut(s) 56, 389, 402
NciI CCSGG 1 cut(s) 974
NdeII GATC 1 cut(s) 760
NlaIII CATG 4 cut(s) 64, 163, 738, 1139
NlaIV GGNNCC 1 cut(s) 84
NmeAIII GCCGAG 1 cut(s) 853
NmuCI GTSAC 3 cut(s) 37, 124, 312
NspI RCATGY 2 cut(s) 163, 1139
PaeI GCATGC 1 cut(s) 1139
PaqCI CACCTGC 1 cut(s) 857
PctI GAATGC 1 cut(s) 1105
PfeI GAWTC 1 cut(s) 595
PflFI GACNNNGTC 1 cut(s) 1006
PkrI GCNGC 5 cut(s) 73, 184, 741, 757, 893
PleI GAGTC 2 cut(s) 581, 607
PpsI GAGTC 2 cut(s) 581, 607
Ppu21I YACGTR 2 cut(s) 206, 455
Psp6I CCWGG 1 cut(s) 835
PspEI GGTNACC 1 cut(s) 312
PspGI CCWGG 1 cut(s) 835
PspN4I GGNNCC 1 cut(s) 84
PspPI GGNCC 2 cut(s) 109, 606
PstI CTGCAG 1 cut(s) 760
PstNI CAGNNNCTG 1 cut(s) 71
PsuI RGATCY 1 cut(s) 760
PsyI GACNNNGTC 1 cut(s) 1006
RsaI GTAC 3 cut(s) 84, 655, 1073
RsaNI GTAC 3 cut(s) 83, 654, 1072
RseI CAYNNNNRTG 2 cut(s) 480, 1140
SaqAI TTAA 3 cut(s) 266, 494, 1125
SatI GCNGC 5 cut(s) 72, 183, 740, 756, 892
Sau3AI GATC 1 cut(s) 760
Sau96I GGNCC 2 cut(s) 109, 606
SchI GAGTC 2 cut(s) 581, 607
ScrFI CCNGG 2 cut(s) 837, 974
SduI GDGCHC 2 cut(s) 580, 874
SexAI ACCWGGT 1 cut(s) 835
SfaNI GCATC 1 cut(s) 619
SfcI CTRYAG 1 cut(s) 756
SinI GGWCC 1 cut(s) 109
SmiMI CAYNNNNRTG 2 cut(s) 480, 1140
SphI GCATGC 1 cut(s) 1139
SsiI CCGC 1 cut(s) 824
SspMI CTAG 3 cut(s) 375, 488, 1064
StyD4I CCNGG 2 cut(s) 835, 972
StyI CCWWGG 2 cut(s) 90, 989
TaaI ACNGT 2 cut(s) 1008, 1020
TaiI ACGT 3 cut(s) 208, 457, 500
TaqI TCGA 2 cut(s) 611, 775
TfiI GAWTC 1 cut(s) 595
Tru1I TTAA 3 cut(s) 266, 494, 1125
Tru9I TTAA 3 cut(s) 266, 494, 1125
TseFI GTSAC 3 cut(s) 37, 124, 312
TseI GCWGC 5 cut(s) 71, 182, 739, 755, 891
Tsp45I GTSAC 3 cut(s) 37, 124, 312
TspDTI ATGAA 3 cut(s) 477, 900, 931
Tth111I GACNNNGTC 1 cut(s) 1006
VpaK11BI GGWCC 1 cut(s) 109
XapI RAATTY 1 cut(s) 1121
XbaI TCTAGA 1 cut(s) 374
XceI RCATGY 2 cut(s) 163, 1139
XcmI CCANNNNNNNNNTGG 2 cut(s) 278, 1022
XmiI GTMKAC 1 cut(s) 202
XspI CTAG 3 cut(s) 375, 488, 1064
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.