CAAX amino terminal protease family protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G03140 AT2G03140 AT2G03140 AT2G03140 AT2G03140 AT2G03140 AT2G03140 AT2G03140 AT2G03140 AT2G03140 AT2G03140 AT2G03140 |
| fragaria_vesca | FvH4_1g09310 FvH4_1g09310 FvH4_1g09310 FvH4_1g09310 |
| malus_domestica | MD02G1100300.v1.1 MD15G1223200.v1.1 MD15G1223300.v1.1 |
| prunus_persica | Prupe.7G192500_v2.0.a1 Prupe.7G192500_v2.0.a1 Prupe.7G192500_v2.0.a1 Prupe.7G192500_v2.0.a1 Prupe.7G192500_v2.0.a1 Prupe.7G192500_v2.0.a1 |
| pyrus_communis | pycom02g07830 pycom02g07840 pycom02g07850 pycom15g19730 pycom15g19740 pycom15g19750 pycom15g19760 |
| rosa_chinensis | RchiOBHm_Chr2g0095891 |
| rosa_laevigata | RLG00000016603 |
| rosa_multiflora | Rmu_co8506623.1_g000001 Rmu_sc0014241.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00146000 |
| rosa_rugosa | Rorug02G0053500 |
| rosa_samantha | Rh2AG102700 Rh2BG104100 Rh2CG106600 Rh2DG104300 |
| rosa_wichuraiana | Rw2G007810 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 4916 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 539, 647 |
| AatII | GACGTC | 1 cut(s) | 4559 |
| Acc36I | ACCTGC | 2 cut(s) | 917, 4916 |
| AccB1I | GGYRCC | 6 cut(s) | 96, 236, 620, 1338, 2533, 3926 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1359, 5084 |
| AccBSI | CCGCTC | 1 cut(s) | 360 |
| AccI | GTMKAC | 1 cut(s) | 90 |
| AccII | CGCG | 8 cut(s) | 78, 87, 242, 278, 905, 1914, 3006, 4977 |
| AccIII | TCCGGA | 2 cut(s) | 132, 2282 |
| AclWI | GGATC | 9 cut(s) | 67, 1695, 1700, 2026, 2332, 2991, 3530, 4321, 4520 |
| AcoI | YGGCCR | 3 cut(s) | 557, 3717, 3736 |
| AcuI | CTGAAG | 2 cut(s) | 128, 4771 |
| AcyI | GRCGYC | 6 cut(s) | 97, 237, 308, 347, 3950, 4556 |
| AfaI | GTAC | 8 cut(s) | 786, 866, 1159, 2790, 3018, 3586, 4143, 4722 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 221, 282, 318, 741, 1359, 1745, 2598, 3158, 5084 |
| AflII | CTTAAG | 1 cut(s) | 4724 |
| AflIII | ACRYGT | 3 cut(s) | 852, 3190, 4717 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 307 |
| AleI | CACNNNNGTG | 1 cut(s) | 1370 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 4766, 4798 |
| Alw26I | GTCTC | 9 cut(s) | 97, 235, 486, 505, 1860, 2184, 2394, 3629, 4189 |
| Alw44I | GTGCAC | 2 cut(s) | 1680, 2064 |
| AlwI | GGATC | 9 cut(s) | 67, 1695, 1700, 2026, 2332, 2991, 3530, 4321, 4520 |
| AlwNI | CAGNNNCTG | 7 cut(s) | 514, 758, 1646, 1931, 1984, 4130, 4757 |
| Ama87I | CYCGRG | 1 cut(s) | 5134 |
| Aor13HI | TCCGGA | 2 cut(s) | 132, 2282 |
| AoxI | GGCC | 9 cut(s) | 223, 557, 939, 3612, 3717, 3736, 4132, 4462, 4664 |
| ApaLI | GTGCAC | 2 cut(s) | 1680, 2064 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 638, 670, 908, 940, 1412, 1444 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1026, 1501, 1908 |
| AspA2I | CCTAGG | 1 cut(s) | 707 |
| AspLEI | GCGC | 6 cut(s) | 99, 239, 244, 848, 4977, 4979 |
| AspS9I | GGNCC | 8 cut(s) | 571, 640, 813, 1958, 2728, 2845, 4133, 4168 |
| AsuC2I | CCSGG | 5 cut(s) | 680, 2531, 2546, 2561, 5033 |
| AsuNHI | GCTAGC | 2 cut(s) | 1475, 1598 |
| AvaI | CYCGRG | 1 cut(s) | 5134 |
| AvaII | GGWCC | 7 cut(s) | 571, 640, 813, 1958, 2728, 2845, 4168 |
| AvrII | CCTAGG | 1 cut(s) | 707 |
| AxyI | CCTNAGG | 1 cut(s) | 2856 |
| BaeGI | GKGCMC | 3 cut(s) | 1684, 2068, 3103 |
| BalI | TGGCCA | 2 cut(s) | 3719, 3738 |
| BanI | GGYRCC | 6 cut(s) | 96, 236, 620, 1338, 2533, 3926 |
| BanII | GRGCYC | 2 cut(s) | 296, 890 |
| BauI | CACGAG | 1 cut(s) | 611 |
| BbsI | GAAGAC | 1 cut(s) | 2079 |
| BbvCI | CCTCAGC | 2 cut(s) | 2373, 2961 |
| BceAI | ACGGC | 2 cut(s) | 334, 3914 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 3200, 3234 |
| BciVI | GTATCC | 2 cut(s) | 2263, 2830 |
| BclI | TGATCA | 3 cut(s) | 973, 1975, 3841 |
| BcnI | CCSGG | 5 cut(s) | 680, 2531, 2546, 2561, 5033 |
| BcoDI | GTCTC | 9 cut(s) | 97, 235, 486, 505, 1860, 2184, 2394, 3629, 4189 |
| BfmI | CTRYAG | 3 cut(s) | 1740, 2214, 4815 |
| BfoI | RGCGCY | 2 cut(s) | 100, 240 |
| BfrI | CTTAAG | 1 cut(s) | 4724 |
| BfuAI | ACCTGC | 2 cut(s) | 917, 4916 |
| BfuI | GTATCC | 2 cut(s) | 2263, 2830 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 3947 |
| BglII | AGATCT | 2 cut(s) | 1322, 4819 |
| BlnI | CCTAGG | 1 cut(s) | 707 |
| BlpI | GCTNAGC | 1 cut(s) | 3688 |
| Bme18I | GGWCC | 7 cut(s) | 571, 640, 813, 1958, 2728, 2845, 4168 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 307 |
| BmeT110I | CYCGRG | 1 cut(s) | 5134 |
| BmgT120I | GGNCC | 8 cut(s) | 571, 640, 813, 1958, 2728, 2845, 4133, 4168 |
| BmsI | GCATC | 7 cut(s) | 1117, 1882, 2578, 2726, 2870, 3307, 4079 |
| BmtI | GCTAGC | 2 cut(s) | 1479, 1602 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2748 |
| BpiI | GAAGAC | 1 cut(s) | 2079 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 5128, 5160 |
| BpmI | CTGGAG | 2 cut(s) | 3798, 4417 |
| Bpu10I | CCTNAGC | 3 cut(s) | 2373, 2961, 3795 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 3688 |
| BpuEI | CTTGAG | 5 cut(s) | 1761, 1938, 3667, 3667, 4788 |
| BpuMI | CCSGG | 5 cut(s) | 680, 2531, 2546, 2561, 5033 |
| BsaAI | YACGTR | 1 cut(s) | 4514 |
| BsaHI | GRCGYC | 6 cut(s) | 97, 237, 308, 347, 3950, 4556 |
| BsaI | GGTCTC | 2 cut(s) | 2394, 4189 |
| BsaWI | WCCGGW | 3 cut(s) | 132, 449, 2282 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 528, 558, 2370, 2400 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 221, 282, 318, 741, 1359, 1745, 2598, 3158, 5084 |
| Bse118I | RCCGGY | 2 cut(s) | 93, 559 |
| Bse21I | CCTNAGG | 1 cut(s) | 2856 |
| Bse3DI | GCAATG | 3 cut(s) | 3997, 4278, 4559 |
| BseAI | TCCGGA | 2 cut(s) | 132, 2282 |
| BseGI | GGATG | 7 cut(s) | 6, 409, 1672, 2182, 2607, 2611, 2731 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 221, 282, 318, 741, 1359, 1745, 2598, 3158, 5084 |
| BseMI | GCAATG | 3 cut(s) | 3997, 4278, 4559 |
| BsePI | GCGCGC | 1 cut(s) | 4975 |
| BseSI | GKGCMC | 3 cut(s) | 1684, 2068, 3103 |
| BseYI | CCCAGC | 4 cut(s) | 56, 823, 834, 4413 |
| BsgI | GTGCAG | 1 cut(s) | 3678 |
| Bsh1236I | CGCG | 8 cut(s) | 78, 87, 242, 278, 905, 1914, 3006, 4977 |
| Bsh1285I | CGRYCG | 2 cut(s) | 222, 696 |
| BshFI | GGCC | 9 cut(s) | 225, 559, 941, 3614, 3719, 3738, 4134, 4464, 4666 |
| BshNI | GGYRCC | 6 cut(s) | 96, 236, 620, 1338, 2533, 3926 |
| BsiEI | CGRYCG | 2 cut(s) | 222, 696 |
| BsiHKCI | CYCGRG | 1 cut(s) | 5134 |
| BslFI | GGGAC | 4 cut(s) | 826, 2480, 4218, 4305 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 221, 282, 318, 741, 1359, 1745, 2598, 3158, 5084 |
| BsmAI | GTCTC | 9 cut(s) | 97, 235, 486, 505, 1860, 2184, 2394, 3629, 4189 |
| BsmBI | CGTCTC | 1 cut(s) | 235 |
| BsmFI | GGGAC | 4 cut(s) | 826, 2480, 4218, 4305 |
| BsmI | GAATGC | 3 cut(s) | 2842, 4859, 5102 |
| BsnI | GGCC | 9 cut(s) | 225, 559, 941, 3614, 3719, 3738, 4134, 4464, 4666 |
| Bso31I | GGTCTC | 2 cut(s) | 2394, 4189 |
| BsoBI | CYCGRG | 1 cut(s) | 5134 |
| Bsp13I | TCCGGA | 2 cut(s) | 132, 2282 |
| Bsp1407I | TGTACA | 2 cut(s) | 784, 2788 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 3688 |
| Bsp19I | CCATGG | 1 cut(s) | 1107 |
| BspANI | GGCC | 9 cut(s) | 225, 559, 941, 3614, 3719, 3738, 4134, 4464, 4666 |
| BspEI | TCCGGA | 2 cut(s) | 132, 2282 |
| BspFNI | CGCG | 8 cut(s) | 78, 87, 242, 278, 905, 1914, 3006, 4977 |
| BspHI | TCATGA | 1 cut(s) | 1453 |
| BspMAI | CTGCAG | 2 cut(s) | 1744, 4819 |
| BspMI | ACCTGC | 2 cut(s) | 917, 4916 |
| BspOI | GCTAGC | 2 cut(s) | 1479, 1602 |
| BspPI | GGATC | 9 cut(s) | 67, 1695, 1700, 2026, 2332, 2991, 3530, 4321, 4520 |
| BspQI | GCTCTTC | 1 cut(s) | 576 |
| BspT107I | GGYRCC | 6 cut(s) | 96, 236, 620, 1338, 2533, 3926 |
| BspTI | CTTAAG | 1 cut(s) | 4724 |
| BspTNI | GGTCTC | 2 cut(s) | 2394, 4189 |
| BsrBI | CCGCTC | 1 cut(s) | 360 |
| BsrDI | GCAATG | 3 cut(s) | 3997, 4278, 4559 |
| BsrFI | RCCGGY | 2 cut(s) | 93, 559 |
| BsrGI | TGTACA | 2 cut(s) | 784, 2788 |
| BssAI | RCCGGY | 2 cut(s) | 93, 559 |
| BssHII | GCGCGC | 1 cut(s) | 4975 |
| BssNI | GRCGYC | 6 cut(s) | 97, 237, 308, 347, 3950, 4556 |
| BssSI | CACGAG | 1 cut(s) | 611 |
| BssT1I | CCWWGG | 4 cut(s) | 707, 1107, 3943, 4945 |
| Bst2BI | CACGAG | 1 cut(s) | 611 |
| Bst6I | CTCTTC | 5 cut(s) | 576, 1410, 2871, 3594, 3646 |
| BstACI | GRCGYC | 6 cut(s) | 97, 237, 308, 347, 3950, 4556 |
| BstAFI | CTTAAG | 1 cut(s) | 4724 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 1885, 2540, 2588 |
| BstAUI | TGTACA | 2 cut(s) | 784, 2788 |
| BstBAI | YACGTR | 1 cut(s) | 4514 |
| BstDSI | CCRYGG | 2 cut(s) | 740, 1107 |
| BstEII | GGTNACC | 1 cut(s) | 4371 |
| BstF5I | GGATG | 7 cut(s) | 6, 409, 1672, 2182, 2607, 2611, 2731 |
| BstFNI | CGCG | 8 cut(s) | 78, 87, 242, 278, 905, 1914, 3006, 4977 |
| BstH2I | RGCGCY | 2 cut(s) | 100, 240 |
| BstHHI | GCGC | 6 cut(s) | 99, 239, 244, 848, 4977, 4979 |
| BstMAI | GTCTC | 9 cut(s) | 97, 235, 486, 505, 1860, 2184, 2394, 3629, 4189 |
| BstMCI | CGRYCG | 2 cut(s) | 222, 696 |
| BstNSI | RCATGY | 9 cut(s) | 856, 1795, 1952, 2834, 3194, 3530, 3826, 4222, 4721 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2748 |
| BstPI | GGTNACC | 1 cut(s) | 4371 |
| BstSFI | CTRYAG | 3 cut(s) | 1740, 2214, 4815 |
| BstSLI | GKGCMC | 3 cut(s) | 1684, 2068, 3103 |
| BstUI | CGCG | 8 cut(s) | 78, 87, 242, 278, 905, 1914, 3006, 4977 |
| BstV2I | GAAGAC | 1 cut(s) | 2079 |
| BstX2I | RGATCY | 5 cut(s) | 72, 1322, 2031, 4525, 4819 |
| BstXI | CCANNNNNNTGG | 7 cut(s) | 199, 823, 2620, 2738, 3487, 3566, 4902 |
| BstYI | RGATCY | 5 cut(s) | 72, 1322, 2031, 4525, 4819 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2856 |
| BsuI | GTATCC | 2 cut(s) | 2263, 2830 |
| BsuRI | GGCC | 9 cut(s) | 225, 559, 941, 3614, 3719, 3738, 4134, 4464, 4666 |
| BtgI | CCRYGG | 2 cut(s) | 740, 1107 |
| BtgZI | GCGATG | 3 cut(s) | 780, 2259, 3225 |
| BtsCI | GGATG | 7 cut(s) | 6, 409, 1672, 2182, 2607, 2611, 2731 |
| BtsI | GCAGTG | 4 cut(s) | 777, 1377, 1902, 3333 |
| BveI | ACCTGC | 2 cut(s) | 917, 4916 |
| CaiI | CAGNNNCTG | 7 cut(s) | 514, 758, 1646, 1931, 1984, 4130, 4757 |
| CciI | TCATGA | 1 cut(s) | 1453 |
| CfoI | GCGC | 6 cut(s) | 99, 239, 244, 848, 4977, 4979 |
| Cfr10I | RCCGGY | 2 cut(s) | 93, 559 |
| Cfr13I | GGNCC | 8 cut(s) | 571, 640, 813, 1958, 2728, 2845, 4133, 4168 |
| CseI | GACGC | 8 cut(s) | 76, 297, 355, 3939, 4076, 4307, 4366, 4697 |
| Csp6I | GTAC | 8 cut(s) | 785, 865, 1158, 2789, 3017, 3585, 4142, 4721 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 1149, 1184, 2335, 2370 |
| CviQI | GTAC | 8 cut(s) | 785, 865, 1158, 2789, 3017, 3585, 4142, 4721 |
| DinI | GGCGCC | 2 cut(s) | 98, 238 |
| DraI | TTTAAA | 2 cut(s) | 1542, 2022 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 539, 647 |
| DriI | GACNNNNNGTC | 1 cut(s) | 307 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 539, 647 |
| EaeI | YGGCCR | 3 cut(s) | 557, 3717, 3736 |
| Eam1104I | CTCTTC | 5 cut(s) | 576, 1410, 2871, 3594, 3646 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 307 |
| EarI | CTCTTC | 5 cut(s) | 576, 1410, 2871, 3594, 3646 |
| EciI | GGCGGA | 2 cut(s) | 950, 3980 |
| Ecl136II | GAGCTC | 2 cut(s) | 294, 888 |
| Eco130I | CCWWGG | 4 cut(s) | 707, 1107, 3943, 4945 |
| Eco24I | GRGCYC | 2 cut(s) | 296, 890 |
| Eco31I | GGTCTC | 2 cut(s) | 2394, 4189 |
| Eco32I | GATATC | 3 cut(s) | 387, 772, 4829 |
| Eco47I | GGWCC | 7 cut(s) | 571, 640, 813, 1958, 2728, 2845, 4168 |
| Eco53kI | GAGCTC | 2 cut(s) | 294, 888 |
| Eco57I | CTGAAG | 2 cut(s) | 128, 4771 |
| Eco81I | CCTNAGG | 1 cut(s) | 2856 |
| Eco88I | CYCGRG | 1 cut(s) | 5134 |
| Eco91I | GGTNACC | 1 cut(s) | 4371 |
| EcoICRI | GAGCTC | 2 cut(s) | 294, 888 |
| EcoO65I | GGTNACC | 1 cut(s) | 4371 |
| EcoRI | GAATTC | 6 cut(s) | 203, 265, 445, 456, 1998, 2677 |
| EcoRV | GATATC | 3 cut(s) | 387, 772, 4829 |
| EcoT14I | CCWWGG | 4 cut(s) | 707, 1107, 3943, 4945 |
| EcoT22I | ATGCAT | 1 cut(s) | 4639 |
| EcoT38I | GRGCYC | 2 cut(s) | 296, 890 |
| EgeI | GGCGCC | 2 cut(s) | 98, 238 |
| EheI | GGCGCC | 2 cut(s) | 98, 238 |
| ErhI | CCWWGG | 4 cut(s) | 707, 1107, 3943, 4945 |
| Esp3I | CGTCTC | 1 cut(s) | 235 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 1829, 1861, 4515, 4547, 4938, 4970 |
| FaqI | GGGAC | 4 cut(s) | 826, 2480, 4218, 4305 |
| FauI | CCCGC | 1 cut(s) | 1907 |
| FauNDI | CATATG | 1 cut(s) | 3603 |
| FbaI | TGATCA | 3 cut(s) | 973, 1975, 3841 |
| FblI | GTMKAC | 1 cut(s) | 90 |
| FokI | GGATG | 6 cut(s) | 416, 1679, 2169, 2614, 2618, 2718 |
| FriOI | GRGCYC | 2 cut(s) | 296, 890 |
| GlaI | GCGC | 6 cut(s) | 98, 238, 243, 847, 4976, 4978 |
| GsaI | CCCAGC | 4 cut(s) | 60, 827, 838, 4417 |
| GsuI | CTGGAG | 2 cut(s) | 3798, 4417 |
| HaeII | RGCGCY | 2 cut(s) | 100, 240 |
| HaeIII | GGCC | 9 cut(s) | 225, 559, 941, 3614, 3719, 3738, 4134, 4464, 4666 |
| HgaI | GACGC | 8 cut(s) | 76, 297, 355, 3939, 4076, 4307, 4366, 4697 |
| HhaI | GCGC | 6 cut(s) | 99, 239, 244, 848, 4977, 4979 |
| Hin1I | GRCGYC | 6 cut(s) | 97, 237, 308, 347, 3950, 4556 |
| Hin6I | GCGC | 6 cut(s) | 97, 237, 242, 846, 4975, 4977 |
| HinP1I | GCGC | 6 cut(s) | 97, 237, 242, 846, 4975, 4977 |
| HincII | GTYRAC | 7 cut(s) | 336, 858, 2131, 2138, 2629, 2950, 5091 |
| HindII | GTYRAC | 7 cut(s) | 336, 858, 2131, 2138, 2629, 2950, 5091 |
| HindIII | AAGCTT | 2 cut(s) | 1881, 3685 |
| HpaI | GTTAAC | 3 cut(s) | 2629, 2950, 5091 |
| Hpy99I | CGWCG | 6 cut(s) | 212, 305, 349, 385, 536, 701 |
| HpyCH4IV | ACGT | 7 cut(s) | 63, 648, 1053, 2884, 3541, 4513, 4556 |
| HpySE526I | ACGT | 7 cut(s) | 63, 648, 1053, 2884, 3541, 4513, 4556 |
| Hsp92I | GRCGYC | 6 cut(s) | 97, 237, 308, 347, 3950, 4556 |
| HspAI | GCGC | 6 cut(s) | 97, 237, 242, 846, 4975, 4977 |
| KasI | GGCGCC | 2 cut(s) | 96, 236 |
| Kpn2I | TCCGGA | 2 cut(s) | 132, 2282 |
| KroI | GCCGGC | 1 cut(s) | 559 |
| KroNI | GCCGGC | 1 cut(s) | 561 |
| Ksp22I | TGATCA | 3 cut(s) | 973, 1975, 3841 |
| KspAI | GTTAAC | 3 cut(s) | 2629, 2950, 5091 |
| LguI | GCTCTTC | 1 cut(s) | 576 |
| LweI | GCATC | 7 cut(s) | 1117, 1882, 2578, 2726, 2870, 3307, 4079 |
| MaeII | ACGT | 7 cut(s) | 63, 648, 1053, 2884, 3541, 4513, 4556 |
| MaeIII | GTNAC | 9 cut(s) | 1694, 1801, 1933, 2741, 2939, 3931, 4088, 4096, 4371 |
| MbiI | CCGCTC | 1 cut(s) | 360 |
| MfeI | CAATTG | 4 cut(s) | 2382, 2618, 2666, 4377 |
| MflI | RGATCY | 5 cut(s) | 72, 1322, 2031, 4525, 4819 |
| MlsI | TGGCCA | 2 cut(s) | 3719, 3738 |
| MluNI | TGGCCA | 2 cut(s) | 3719, 3738 |
| Mly113I | GGCGCC | 2 cut(s) | 97, 237 |
| MlyI | GAGTC | 8 cut(s) | 549, 987, 1538, 1702, 1740, 2186, 4025, 5033 |
| MmeI | TCCRAC | 9 cut(s) | 324, 368, 381, 469, 531, 2097, 3175, 3837, 5098 |
| Mox20I | TGGCCA | 2 cut(s) | 3719, 3738 |
| Mph1103I | ATGCAT | 1 cut(s) | 4639 |
| MroI | TCCGGA | 2 cut(s) | 132, 2282 |
| MroNI | GCCGGC | 1 cut(s) | 559 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1026, 1501, 1908 |
| MscI | TGGCCA | 2 cut(s) | 3719, 3738 |
| Msp20I | TGGCCA | 2 cut(s) | 3719, 3738 |
| MspA1I | CMGCKG | 3 cut(s) | 755, 1928, 3938 |
| MspCI | CTTAAG | 1 cut(s) | 4724 |
| MteI | GCGCNGCGC | 1 cut(s) | 240 |
| MunI | CAATTG | 4 cut(s) | 2382, 2618, 2666, 4377 |
| Mva1269I | GAATGC | 3 cut(s) | 2842, 4859, 5102 |
| MvnI | CGCG | 8 cut(s) | 78, 87, 242, 278, 905, 1914, 3006, 4977 |
| NaeI | GCCGGC | 1 cut(s) | 561 |
| NarI | GGCGCC | 2 cut(s) | 97, 237 |
| NciI | CCSGG | 5 cut(s) | 680, 2531, 2546, 2561, 5033 |
| NcoI | CCATGG | 1 cut(s) | 1107 |
| NdeI | CATATG | 1 cut(s) | 3603 |
| NgoMIV | GCCGGC | 1 cut(s) | 559 |
| NheI | GCTAGC | 2 cut(s) | 1475, 1598 |
| NmeAIII | GCCGAG | 1 cut(s) | 4912 |
| NmuCI | GTSAC | 5 cut(s) | 1694, 2741, 2939, 4096, 4371 |
| NsiI | ATGCAT | 1 cut(s) | 4639 |
| NspI | RCATGY | 9 cut(s) | 856, 1795, 1952, 2834, 3194, 3530, 3826, 4222, 4721 |
| OliI | CACNNNNGTG | 1 cut(s) | 1370 |
| PagI | TCATGA | 1 cut(s) | 1453 |
| PaqCI | CACCTGC | 1 cut(s) | 4916 |
| PasI | CCCWGGG | 1 cut(s) | 628 |
| PauI | GCGCGC | 1 cut(s) | 4975 |
| PciI | ACATGT | 3 cut(s) | 852, 3190, 4717 |
| PciSI | GCTCTTC | 1 cut(s) | 576 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 309, 540 |
| PctI | GAATGC | 3 cut(s) | 2842, 4859, 5102 |
| PdiI | GCCGGC | 1 cut(s) | 561 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1026, 1501, 1908 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1359, 5084 |
| Ple19I | CGATCG | 2 cut(s) | 222, 696 |
| PleI | GAGTC | 8 cut(s) | 548, 987, 1537, 1701, 1739, 2185, 4024, 5033 |
| PluTI | GGCGCC | 2 cut(s) | 100, 240 |
| PpsI | GAGTC | 8 cut(s) | 548, 987, 1537, 1701, 1739, 2185, 4024, 5033 |
| Ppu21I | YACGTR | 1 cut(s) | 4514 |
| PscI | ACATGT | 3 cut(s) | 852, 3190, 4717 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2748 |
| Psp124BI | GAGCTC | 2 cut(s) | 296, 890 |
| PspEI | GGTNACC | 1 cut(s) | 4371 |
| PspFI | CCCAGC | 4 cut(s) | 56, 823, 834, 4413 |
| PspPI | GGNCC | 8 cut(s) | 571, 640, 813, 1958, 2728, 2845, 4133, 4168 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 2911, 2943 |
| PstI | CTGCAG | 2 cut(s) | 1744, 4819 |
| PstNI | CAGNNNCTG | 7 cut(s) | 514, 758, 1646, 1931, 1984, 4130, 4757 |
| PsuI | RGATCY | 5 cut(s) | 72, 1322, 2031, 4525, 4819 |
| PteI | GCGCGC | 1 cut(s) | 4975 |
| PvuI | CGATCG | 2 cut(s) | 222, 696 |
| PvuII | CAGCTG | 3 cut(s) | 755, 1928, 3938 |
| RsaI | GTAC | 8 cut(s) | 786, 866, 1159, 2790, 3018, 3586, 4143, 4722 |
| RsaNI | GTAC | 8 cut(s) | 785, 865, 1158, 2789, 3017, 3585, 4142, 4721 |
| SacI | GAGCTC | 2 cut(s) | 296, 890 |
| SapI | GCTCTTC | 1 cut(s) | 576 |
| Sau96I | GGNCC | 8 cut(s) | 571, 640, 813, 1958, 2728, 2845, 4133, 4168 |
| SchI | GAGTC | 8 cut(s) | 549, 987, 1538, 1702, 1740, 2186, 4025, 5033 |
| SfaNI | GCATC | 7 cut(s) | 1117, 1882, 2578, 2726, 2870, 3307, 4079 |
| SfcI | CTRYAG | 3 cut(s) | 1740, 2214, 4815 |
| SfoI | GGCGCC | 2 cut(s) | 98, 238 |
| SinI | GGWCC | 7 cut(s) | 571, 640, 813, 1958, 2728, 2845, 4168 |
| SmlI | CTYRAG | 6 cut(s) | 1776, 1953, 3646, 3682, 4724, 4803 |
| SmoI | CTYRAG | 6 cut(s) | 1776, 1953, 3646, 3682, 4724, 4803 |
| SspDI | GGCGCC | 2 cut(s) | 96, 236 |
| SspI | AATATT | 3 cut(s) | 3282, 3400, 3707 |
| SstI | GAGCTC | 2 cut(s) | 296, 890 |
| StyI | CCWWGG | 4 cut(s) | 707, 1107, 3943, 4945 |
| TaiI | ACGT | 7 cut(s) | 66, 651, 1056, 2887, 3544, 4516, 4559 |
| TatI | WGTACW | 4 cut(s) | 784, 1157, 2788, 4720 |
| TauI | GCSGC | 3 cut(s) | 242, 429, 905 |
| TseFI | GTSAC | 5 cut(s) | 1694, 2741, 2939, 4096, 4371 |
| Tsp45I | GTSAC | 5 cut(s) | 1694, 2741, 2939, 4096, 4371 |
| TspGWI | ACGGA | 8 cut(s) | 301, 352, 369, 542, 549, 1073, 3905, 4550 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1359, 5084 |
| Vha464I | CTTAAG | 1 cut(s) | 4724 |
| VneI | GTGCAC | 2 cut(s) | 1680, 2064 |
| VpaK11BI | GGWCC | 7 cut(s) | 571, 640, 813, 1958, 2728, 2845, 4168 |
| XceI | RCATGY | 9 cut(s) | 856, 1795, 1952, 2834, 3194, 3530, 3826, 4222, 4721 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 5081 |
| XmaJI | CCTAGG | 1 cut(s) | 707 |
| XmiI | GTMKAC | 1 cut(s) | 90 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1026, 1501, 1908 |
| ZraI | GACGTC | 1 cut(s) | 4557 |
| Zsp2I | ATGCAT | 1 cut(s) | 4639 |