Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0006839

Physical Location & Seq

Genomic Coordinates Forward (+)

14353384 .. 14355648

Gene Structure 2265 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 870 bp

ATGGGTCGAAGAATCATGGAATGGGCTGCTCGGTCCGATCACATGGGCGGCATTCCGAGGAAGATGGTGATCACGGCGGTTGGGGGTCTGGCAAAGGCCGTCGTCTCCCTCATCAACTCCACCACTGTCCACAATGCCGACACCCTTCTCCGTCTGGTCCGGTCTCGGCCTAATGGGGTCCCACTCGTCACTGTCAGCAACCACATGTCCACCATGGACGACCCCTTTTTGTGGGGTTTCAAGGGGTTCCCCAGCACTGATGCGAATTTGGCGAGGTGGGTTTTGGCCGCCGAGGACATCTGCTTCAAAAATTCGGTGCTTTCTTACTTCTTCAGATTAGGGAAGTGCATTCCAATTACGCGGGGTGGCGGCATTTATCAAGAACACATGAACGAAGCTCTTGAGAGATTAAGTGAAGGTTCATGGTTGCATACATTTCCTGAAGGAAAAGTATACCAGGAAGATGCACCTATAAGACGATTGAAGTGGGGGGCTGCTAGTCTCATTGCTCGTGCTCCTGTAACCCCTATAGTTTTGCCGATTGTTCATACTGGGTTTGAACAGGTGATGCCTGAGAAGTTTTATCGTGGTAAAAGGCCTCCATTTCCGTTATGGAATAAGCACATTAAGATAATAGTTGGCGAGCCAATGGAACTGGACCTTCCTGAAATGAGGCGGATGGCAACCTTTCTGTCTCGTAATACATCACATTCTACTCTAGGATGGCCAAGCACTTGCTCTGGTGGTTTGGACGAGGCAGCACAAAAACATCTGTACAGTGCAATTTCCGAGCAAATCCAAAATGTCATGGAGCGCTTACGGCTGTTTGCTAAAAGTTTTTCAAAGTCCAAAGATCAAAATCTTTGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005886 GO:0006629 GO:0006644 GO:0006650 GO:0006793 GO:0006796 GO:0006996 GO:0007005 GO:0007006 GO:0007007 GO:0007275 GO:0007507 GO:0008150 GO:0008152 GO:0008374 GO:0009987 GO:0016020 GO:0016043 GO:0016740 GO:0016746 GO:0016747 GO:0019637 GO:0031090 GO:0031224 GO:0031966 GO:0031967 GO:0031975 GO:0032048 GO:0032501 GO:0032502 GO:0035965 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044255 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0046471 GO:0046486 GO:0048513 GO:0048731 GO:0048856 GO:0061024 GO:0071617 GO:0071704 GO:0071840 GO:0071944 GO:0072359

KEGG Pathways

Metabolic & Signaling

ko00564 ko00790 ko01523 map00564 map00790 map01523

Pfam Domains

Protein Families

Acyltransferase

Protein Analysis

290

Amino Acids

32.48

Weight (kDa)

9.6

Isoelectric Point (pI)

44.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Acyltransferase	PF01553	51 - 182	4.5e-18	Acyltransferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006839)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G78690 AT1G78690 AT1G78690 AT1G78690 AT1G78690
fragaria_vesca	FvH4_1g09860 FvH4_1g09860
malus_domestica	MD02G1106200.v1.1 MD15G1226000.v1.1
prunus_persica	Prupe.7G189000_v2.0.a1 Prupe.7G189000_v2.0.a1 Prupe.7G189000_v2.0.a1
pyrus_communis	pycom02g08400 pycom15g20090
rosa_chinensis	RchiOBHm_Chr2g0096581
rosa_laevigata	RLG00000016651
rosa_multiflora	Rmu_sc0004096.1_g000003 Rmu_sc0014659.1_g000002
rosa_roxburghii	Rroxscaffold_2G00145520
rosa_rugosa	Rorug02G0058800 Rorug02G0058900
rosa_samantha	Rh2AG105900 Rh2BG108400 Rh2CG110200 Rh2DG109000
rosa_wichuraiana	Rw2G008200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	453
AccII	CGCG	1 cut(s)	361
AciI	CCGC	6 cut(s)	48, 77, 288, 361, 369, 676
AcoI	YGGCCR	2 cut(s)	285, 725
AcsI	RAATTY	2 cut(s)	265, 310
AcuI	CTGAAG	2 cut(s)	316, 462
AfaI	GTAC	1 cut(s)	776
AfeI	AGCGCT	1 cut(s)	815
AfiI	CCNNNNNNNGG	1 cut(s)	231
AflIII	ACRYGT	1 cut(s)	204
AgsI	TTSAA	5 cut(s)	241, 307, 484, 560, 843
AjnI	CCWGG	1 cut(s)	456
AluBI	AGCT	1 cut(s)	398
AluI	AGCT	1 cut(s)	398
Alw21I	GWGCWC	1 cut(s)	517
Alw26I	GTCTC	4 cut(s)	109, 168, 506, 699
Aor51HI	AGCGCT	1 cut(s)	815
AoxI	GGCC	5 cut(s)	96, 167, 285, 596, 725
ApeKI	GCWGC	3 cut(s)	26, 494, 758
ApoI	RAATTY	2 cut(s)	265, 310
AspLEI	GCGC	1 cut(s)	816
AspS9I	GGNCC	4 cut(s)	33, 157, 178, 658
AsuHPI	GGTGA	2 cut(s)	79, 577
AvaII	GGWCC	4 cut(s)	33, 157, 178, 658
BalI	TGGCCA	1 cut(s)	727
BauI	CACGAG	1 cut(s)	510
Bbv12I	GWGCWC	1 cut(s)	517
BbvI	GCAGC	3 cut(s)	13, 481, 770
BccI	CCATC	3 cut(s)	58, 673, 717
BceAI	ACGGC	3 cut(s)	83, 90, 836
BciT130I	CCWGG	1 cut(s)	458
BclI	TGATCA	1 cut(s)	69
BcoDI	GTCTC	4 cut(s)	109, 168, 506, 699
BfaI	CTAG	3 cut(s)	498, 719, 868
BfmI	CTRYAG	1 cut(s)	528
BfoI	RGCGCY	1 cut(s)	817
BisI	GCNGC	6 cut(s)	27, 49, 288, 370, 495, 759
BlsI	GCNGC	6 cut(s)	28, 50, 289, 371, 496, 760
Bme1390I	CCNGG	1 cut(s)	458
Bme18I	GGWCC	4 cut(s)	33, 157, 178, 658
BmgT120I	GGNCC	4 cut(s)	33, 157, 178, 658
BmiI	GGNNCC	3 cut(s)	179, 180, 248
BmrFI	CCNGG	1 cut(s)	458
BmrI	ACTGGG	1 cut(s)	561
BmsI	GCATC	3 cut(s)	250, 454, 558
BmuI	ACTGGG	1 cut(s)	561
BpuEI	CTTGAG	1 cut(s)	422
BsaBI	GATNNNNATC	2 cut(s)	68, 858
BsaI	GGTCTC	1 cut(s)	168
BsaJI	CCNNGG	3 cut(s)	56, 213, 291
BsaWI	WCCGGW	1 cut(s)	159
Bsc4I	CCNNNNNNNGG	1 cut(s)	231
Bse1I	ACTGG	2 cut(s)	556, 660
Bse3DI	GCAATG	1 cut(s)	504
Bse8I	GATNNNNATC	2 cut(s)	68, 858
BseBI	CCWGG	1 cut(s)	458
BseDI	CCNNGG	3 cut(s)	56, 213, 291
BseGI	GGATG	2 cut(s)	684, 728
BseJI	GATNNNNATC	2 cut(s)	68, 858
BseLI	CCNNNNNNNGG	1 cut(s)	231
BseMI	GCAATG	1 cut(s)	504
BseMII	CTCAG	1 cut(s)	564
BseNI	ACTGG	2 cut(s)	556, 660
BseXI	GCAGC	3 cut(s)	13, 481, 770
BseYI	CCCAGC	1 cut(s)	251
Bsh1236I	CGCG	1 cut(s)	361
BshFI	GGCC	5 cut(s)	98, 169, 287, 598, 727
BsiHKAI	GWGCWC	1 cut(s)	517
BsiSI	CCGG	1 cut(s)	160
BslFI	GGGAC	1 cut(s)	164
BslI	CCNNNNNNNGG	1 cut(s)	231
BsmAI	GTCTC	4 cut(s)	109, 168, 506, 699
BsmBI	CGTCTC	1 cut(s)	109
BsmFI	GGGAC	1 cut(s)	164
BsmI	GAATGC	2 cut(s)	51, 348
BsnI	GGCC	5 cut(s)	98, 169, 287, 598, 727
Bso31I	GGTCTC	1 cut(s)	168
Bsp1286I	GDGCHC	1 cut(s)	517
Bsp1407I	TGTACA	1 cut(s)	774
Bsp143I	GATC	3 cut(s)	37, 69, 853
Bsp19I	CCATGG	1 cut(s)	213
BspACI	CCGC	6 cut(s)	48, 77, 288, 361, 369, 676
BspANI	GGCC	5 cut(s)	98, 169, 287, 598, 727
BspCNI	CTCAG	1 cut(s)	565
BspFNI	CGCG	1 cut(s)	361
BspLI	GGNNCC	3 cut(s)	179, 180, 248
BspTNI	GGTCTC	1 cut(s)	168
BsrDI	GCAATG	1 cut(s)	504
BsrGI	TGTACA	1 cut(s)	774
BsrI	ACTGG	2 cut(s)	556, 660
BssECI	CCNNGG	3 cut(s)	56, 213, 291
BssMI	GATC	3 cut(s)	37, 69, 853
BssNAI	GTATAC	1 cut(s)	454
BssSI	CACGAG	1 cut(s)	510
BssT1I	CCWWGG	1 cut(s)	213
Bst1107I	GTATAC	1 cut(s)	454
Bst2BI	CACGAG	1 cut(s)	510
Bst2UI	CCWGG	1 cut(s)	458
Bst4CI	ACNGT	3 cut(s)	127, 193, 779
BstAUI	TGTACA	1 cut(s)	774
BstC8I	GCNNGC	1 cut(s)	644
BstDEI	CTNAG	1 cut(s)	573
BstDSI	CCRYGG	1 cut(s)	213
BstF5I	GGATG	2 cut(s)	684, 728
BstFNI	CGCG	1 cut(s)	361
BstH2I	RGCGCY	1 cut(s)	817
BstHHI	GCGC	1 cut(s)	816
BstKTI	GATC	3 cut(s)	40, 72, 856
BstMAI	GTCTC	4 cut(s)	109, 168, 506, 699
BstMBI	GATC	3 cut(s)	37, 69, 853
BstMWI	GCNNNNNNNGC	2 cut(s)	269, 820
BstNI	CCWGG	1 cut(s)	458
BstNSI	RCATGY	1 cut(s)	208
BstSCI	CCNGG	1 cut(s)	456
BstSFI	CTRYAG	1 cut(s)	528
BstUI	CGCG	1 cut(s)	361
BstV1I	GCAGC	3 cut(s)	13, 481, 770
BstZ17I	GTATAC	1 cut(s)	454
BsuRI	GGCC	5 cut(s)	98, 169, 287, 598, 727
BtgI	CCRYGG	1 cut(s)	213
BtsCI	GGATG	2 cut(s)	684, 728
BtsIMutI	CAGTG	4 cut(s)	123, 189, 255, 784
Cac8I	GCNNGC	1 cut(s)	644
CfoI	GCGC	1 cut(s)	816
Cfr13I	GGNCC	4 cut(s)	33, 157, 178, 658
CpoI	CGGWCCG	1 cut(s)	33
Csp6I	GTAC	1 cut(s)	775
CspI	CGGWCCG	1 cut(s)	33
CviAII	CATG	7 cut(s)	16, 43, 205, 214, 388, 423, 808
CviQI	GTAC	1 cut(s)	775
DdeI	CTNAG	1 cut(s)	573
DpnI	GATC	3 cut(s)	39, 71, 855
DpnII	GATC	3 cut(s)	37, 69, 853
EaeI	YGGCCR	2 cut(s)	285, 725
EciI	GGCGGA	1 cut(s)	691
Eco130I	CCWWGG	1 cut(s)	213
Eco147I	AGGCCT	1 cut(s)	598
Eco31I	GGTCTC	1 cut(s)	168
Eco47I	GGWCC	4 cut(s)	33, 157, 178, 658
Eco47III	AGCGCT	1 cut(s)	815
Eco57I	CTGAAG	2 cut(s)	316, 462
EcoO109I	RGGNCCY	1 cut(s)	178
EcoRII	CCWGG	1 cut(s)	456
EcoT14I	CCWWGG	1 cut(s)	213
ErhI	CCWWGG	1 cut(s)	213
Esp3I	CGTCTC	1 cut(s)	109
FaeI	CATG	7 cut(s)	19, 46, 208, 217, 391, 426, 811
FaqI	GGGAC	1 cut(s)	164
FatI	CATG	7 cut(s)	15, 42, 204, 213, 387, 422, 807
FauI	CCCGC	1 cut(s)	354
FbaI	TGATCA	1 cut(s)	69
FblI	GTMKAC	1 cut(s)	453
Fnu4HI	GCNGC	6 cut(s)	27, 49, 288, 370, 495, 759
FokI	GGATG	2 cut(s)	691, 735
Fsp4HI	GCNGC	6 cut(s)	27, 49, 288, 370, 495, 759
FspBI	CTAG	3 cut(s)	498, 719, 868
GlaI	GCGC	1 cut(s)	815
GluI	GCNGC	6 cut(s)	27, 49, 288, 370, 495, 759
GsaI	CCCAGC	1 cut(s)	255
HaeII	RGCGCY	1 cut(s)	817
HaeIII	GGCC	5 cut(s)	98, 169, 287, 598, 727
HapII	CCGG	1 cut(s)	160
HhaI	GCGC	1 cut(s)	816
Hin1II	CATG	7 cut(s)	19, 46, 208, 217, 391, 426, 811
Hin6I	GCGC	1 cut(s)	814
HinP1I	GCGC	1 cut(s)	814
HinfI	GANTC	1 cut(s)	12
HpaII	CCGG	1 cut(s)	160
HphI	GGTGA	2 cut(s)	79, 577
Hpy166II	GTNNAC	3 cut(s)	130, 210, 454
Hpy188I	TCNGA	4 cut(s)	37, 57, 335, 790
Hpy188III	TCNNGA	4 cut(s)	380, 401, 440, 665
Hpy8I	GTNNAC	3 cut(s)	130, 210, 454
Hpy99I	CGWCG	1 cut(s)	104
HpyAV	CCTTC	4 cut(s)	155, 410, 437, 671
HpyCH4III	ACNGT	3 cut(s)	127, 193, 779
HpyCH4V	TGCA	4 cut(s)	348, 430, 467, 782
HpyF10VI	GCNNNNNNNGC	2 cut(s)	269, 820
HpyF3I	CTNAG	1 cut(s)	573
Hsp92II	CATG	7 cut(s)	19, 46, 208, 217, 391, 426, 811
HspAI	GCGC	1 cut(s)	814
KflI	GGGWCCC	1 cut(s)	178
Ksp22I	TGATCA	1 cut(s)	69
Kzo9I	GATC	3 cut(s)	37, 69, 853
LmnI	GCTCC	2 cut(s)	520, 811
Lsp1109I	GCAGC	3 cut(s)	13, 481, 770
LweI	GCATC	3 cut(s)	250, 454, 558
MaeI	CTAG	3 cut(s)	498, 719, 868
MaeIII	GTNAC	2 cut(s)	187, 520
MalI	GATC	3 cut(s)	39, 71, 855
MboI	GATC	3 cut(s)	37, 69, 853
MboII	GAAGA	4 cut(s)	21, 73, 322, 473
MhlI	GDGCHC	1 cut(s)	517
MlsI	TGGCCA	1 cut(s)	727
MluCI	AATT	4 cut(s)	265, 310, 354, 783
MluNI	TGGCCA	1 cut(s)	727
MnlI	CCTC	7 cut(s)	51, 119, 267, 286, 609, 666, 748
Mox20I	TGGCCA	1 cut(s)	727
MscI	TGGCCA	1 cut(s)	727
MseI	TTAA	2 cut(s)	410, 627
Msp20I	TGGCCA	1 cut(s)	727
MspI	CCGG	1 cut(s)	160
MspR9I	CCNGG	1 cut(s)	458
Mva1269I	GAATGC	2 cut(s)	51, 348
MvaI	CCWGG	1 cut(s)	458
MvnI	CGCG	1 cut(s)	361
MwoI	GCNNNNNNNGC	2 cut(s)	269, 820
NcoI	CCATGG	1 cut(s)	213
NdeII	GATC	3 cut(s)	37, 69, 853
NlaIII	CATG	7 cut(s)	19, 46, 208, 217, 391, 426, 811
NlaIV	GGNNCC	3 cut(s)	179, 180, 248
NmeAIII	GCCGAG	2 cut(s)	145, 316
NmuCI	GTSAC	1 cut(s)	187
NspI	RCATGY	1 cut(s)	208
PceI	AGGCCT	1 cut(s)	598
PciI	ACATGT	1 cut(s)	204
PctI	GAATGC	2 cut(s)	51, 348
PfeI	GAWTC	1 cut(s)	12
PkrI	GCNGC	6 cut(s)	28, 50, 289, 371, 496, 760
PpuMI	RGGWCCY	1 cut(s)	178
PscI	ACATGT	1 cut(s)	204
Psp5II	RGGWCCY	1 cut(s)	178
Psp6I	CCWGG	1 cut(s)	456
PspFI	CCCAGC	1 cut(s)	251
PspGI	CCWGG	1 cut(s)	456
PspN4I	GGNNCC	3 cut(s)	179, 180, 248
PspPI	GGNCC	4 cut(s)	33, 157, 178, 658
PspPPI	RGGWCCY	1 cut(s)	178
RsaI	GTAC	1 cut(s)	776
RsaNI	GTAC	1 cut(s)	775
Rsr2I	CGGWCCG	1 cut(s)	33
RsrII	CGGWCCG	1 cut(s)	33
SaqAI	TTAA	2 cut(s)	410, 627
SatI	GCNGC	6 cut(s)	27, 49, 288, 370, 495, 759
Sau3AI	GATC	3 cut(s)	37, 69, 853
Sau96I	GGNCC	4 cut(s)	33, 157, 178, 658
ScrFI	CCNGG	1 cut(s)	458
SduI	GDGCHC	1 cut(s)	517
SetI	ASST	7 cut(s)	278, 400, 421, 472, 567, 663, 689
SfaNI	GCATC	3 cut(s)	250, 454, 558
SfcI	CTRYAG	1 cut(s)	528
SinI	GGWCC	4 cut(s)	33, 157, 178, 658
SmlI	CTYRAG	1 cut(s)	401
SmoI	CTYRAG	1 cut(s)	401
Sse9I	AATT	4 cut(s)	265, 310, 354, 783
SseBI	AGGCCT	1 cut(s)	598
SsiI	CCGC	6 cut(s)	48, 77, 288, 361, 369, 676
SspMI	CTAG	3 cut(s)	498, 719, 868
StuI	AGGCCT	1 cut(s)	598
StyD4I	CCNGG	1 cut(s)	456
StyI	CCWWGG	1 cut(s)	213
TaaI	ACNGT	3 cut(s)	127, 193, 779
TaqI	TCGA	1 cut(s)	7
TaqII	GACCGA	1 cut(s)	21
TasI	AATT	4 cut(s)	265, 310, 354, 783
TatI	WGTACW	1 cut(s)	774
TauI	GCSGC	3 cut(s)	51, 290, 372
TfiI	GAWTC	1 cut(s)	12
Tru1I	TTAA	2 cut(s)	410, 627
Tru9I	TTAA	2 cut(s)	410, 627
TscAI	CASTG	4 cut(s)	130, 196, 262, 784
TseFI	GTSAC	1 cut(s)	187
TseI	GCWGC	3 cut(s)	26, 494, 758
Tsp45I	GTSAC	1 cut(s)	187
TspDTI	ATGAA	3 cut(s)	404, 411, 536
TspGWI	ACGGA	2 cut(s)	140, 597
TspRI	CASTG	4 cut(s)	130, 196, 262, 784
VpaK11BI	GGWCC	4 cut(s)	33, 157, 178, 658
XapI	RAATTY	2 cut(s)	265, 310
XceI	RCATGY	1 cut(s)	208
XcmI	CCANNNNNNNNNTGG	1 cut(s)	609
XmiI	GTMKAC	1 cut(s)	453
XspI	CTAG	3 cut(s)	498, 719, 868

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.