pycom15g20200

Diacylglycerol O-acyltransferase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Forward (+)
14419534 .. 14419868
335 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g20200.2

Sequence Viewer

Length: 222 bp
ATGGTGGAGATGAAGGAGGAGGAATCTCAGAAGATGGCGGTTTTCAAAGGCAGAGAAATATTCGGGTCAAATGTTTTGCACATGGTTCTGGCTCTGGGTATTTGGCTGGGTACAATCCATTTCAACGCGGCTCTGGTTCTCTTCACAATCTTCTTCCTTCCATTCTCCAAGGCCCTTCTTGTACTTGGGTTGCTTGTATTGTTTATGATCGATCCCAGTTGA

Protein Analysis

74

Amino Acids

8.21

Weight (kDa)

6.02

Isoelectric Point (pI)

37.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0019314)

Species Orthologous Gene IDs
pyrus_communis pycom02g08650 pycom15g20200
rosa_laevigata RLG00000022348
rosa_rugosa Rorug05G0301000
rosa_samantha Rh1CG067100 Rh1DG071900 Rh5BG382600 Rh7BG084600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 128
AciI CCGC 2 cut(s) 38, 128
AclWI GGATC 1 cut(s) 206
AfaI GTAC 2 cut(s) 112, 183
AgsI TTSAA 2 cut(s) 46, 124
AlwI GGATC 1 cut(s) 206
AoxI GGCC 1 cut(s) 171
AspS9I GGNCC 1 cut(s) 172
BccI CCATC 1 cut(s) 28
BisI GCNGC 1 cut(s) 129
BlsI GCNGC 1 cut(s) 130
BmgT120I GGNCC 1 cut(s) 172
BmrI ACTGGG 1 cut(s) 210
BmuI ACTGGG 1 cut(s) 210
Bsa29I ATCGAT 1 cut(s) 210
BsaJI CCNNGG 1 cut(s) 168
Bse1I ACTGG 1 cut(s) 216
BseCI ATCGAT 1 cut(s) 210
BseDI CCNNGG 1 cut(s) 168
BseMII CTCAG 1 cut(s) 41
BseNI ACTGG 1 cut(s) 216
BseRI GAGGAG 1 cut(s) 32
BseYI CCCAGC 1 cut(s) 106
Bsh1236I CGCG 1 cut(s) 128
BshFI GGCC 1 cut(s) 173
BshVI ATCGAT 1 cut(s) 210
BsnI GGCC 1 cut(s) 173
Bsp143I GATC 2 cut(s) 207, 211
BspACI CCGC 2 cut(s) 38, 128
BspANI GGCC 1 cut(s) 173
BspCNI CTCAG 1 cut(s) 40
BspDI ATCGAT 1 cut(s) 210
BspFNI CGCG 1 cut(s) 128
BspPI GGATC 1 cut(s) 206
BsrI ACTGG 1 cut(s) 216
BssECI CCNNGG 1 cut(s) 168
BssMI GATC 2 cut(s) 207, 211
BssT1I CCWWGG 1 cut(s) 168
Bst6I CTCTTC 1 cut(s) 146
BstDEI CTNAG 1 cut(s) 27
BstFNI CGCG 1 cut(s) 128
BstKTI GATC 2 cut(s) 210, 214
BstMBI GATC 2 cut(s) 207, 211
BstUI CGCG 1 cut(s) 128
Bsu15I ATCGAT 1 cut(s) 210
BsuRI GGCC 1 cut(s) 173
BsuTUI ATCGAT 1 cut(s) 210
Cfr13I GGNCC 1 cut(s) 172
ClaI ATCGAT 1 cut(s) 210
Csp6I GTAC 2 cut(s) 111, 182
CviAII CATG 1 cut(s) 82
CviJI RGCY 4 cut(s) 92, 106, 131, 173
CviKI_1 RGCY 4 cut(s) 92, 106, 131, 173
CviQI GTAC 2 cut(s) 111, 182
DdeI CTNAG 1 cut(s) 27
DpnI GATC 2 cut(s) 209, 213
DpnII GATC 2 cut(s) 207, 211
Eam1104I CTCTTC 1 cut(s) 146
EarI CTCTTC 1 cut(s) 146
Eco130I CCWWGG 1 cut(s) 168
EcoO109I RGGNCCY 1 cut(s) 172
EcoT14I CCWWGG 1 cut(s) 168
ErhI CCWWGG 1 cut(s) 168
FaeI CATG 1 cut(s) 85
FaiI YATR 2 cut(s) 83, 206
FatI CATG 1 cut(s) 81
Fnu4HI GCNGC 1 cut(s) 129
Fsp4HI GCNGC 1 cut(s) 129
GluI GCNGC 1 cut(s) 129
GsaI CCCAGC 1 cut(s) 110
HaeIII GGCC 1 cut(s) 173
Hin1II CATG 1 cut(s) 85
HinfI GANTC 1 cut(s) 23
Hpy188I TCNGA 1 cut(s) 30
HpyAV CCTTC 3 cut(s) 7, 167, 185
HpyCH4V TGCA 1 cut(s) 79
HpyF3I CTNAG 1 cut(s) 27
Hsp92II CATG 1 cut(s) 85
Kzo9I GATC 2 cut(s) 207, 211
LpnPI CCDG 4 cut(s) 74, 80, 92, 119
MalI GATC 2 cut(s) 209, 213
MboI GATC 2 cut(s) 207, 211
MboII GAAGA 4 cut(s) 43, 133, 142, 145
MnlI CCTC 2 cut(s) 10, 13
MvnI CGCG 1 cut(s) 128
NdeII GATC 2 cut(s) 207, 211
NlaIII CATG 1 cut(s) 85
PfeI GAWTC 1 cut(s) 23
PkrI GCNGC 1 cut(s) 130
PspFI CCCAGC 1 cut(s) 106
PspPI GGNCC 1 cut(s) 172
RsaI GTAC 2 cut(s) 112, 183
RsaNI GTAC 2 cut(s) 111, 182
SatI GCNGC 1 cut(s) 129
Sau3AI GATC 2 cut(s) 207, 211
Sau96I GGNCC 1 cut(s) 172
SsiI CCGC 2 cut(s) 38, 128
SspI AATATT 1 cut(s) 60
StyI CCWWGG 1 cut(s) 168
TaqI TCGA 1 cut(s) 210
TatI WGTACW 1 cut(s) 181
TauI GCSGC 1 cut(s) 131
TfiI GAWTC 1 cut(s) 23
TspDTI ATGAA 1 cut(s) 26
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.