Rh7BG084600

Diacylglycerol O-acyltransferase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
Physical Location & Seq
Forward (+)
6135177 .. 6135528
352 bp
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UTR
Exon/CDS
Intron
Rh7BG084600.1

Sequence Viewer

Length: 240 bp
ATGGTGGAGATGGAGCAGGAAGAAGAGAAGGAGGGAATGACCATAATCGAAGGAAAAGAAGTTATCGGATTGAGAATCGTAAACATGTTTGTGGCGATAGGTCTATGGCTTGGAGCTATTCATTTCAACGTGGCTTTGATTCTCTTCACTGTGTGCTTCCTTCCTATTTCCAAAGCCATATTGGTATTTGGGTTGCTTGTGTTGTTTATGATAATCCCAGTTGATGATAAGAGCAAATAG

Protein Analysis

79

Amino Acids

8.87

Weight (kDa)

4.75

Isoelectric Point (pI)

38.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0019314)

Species Orthologous Gene IDs
pyrus_communis pycom02g08650 pycom15g20200
rosa_laevigata RLG00000022348
rosa_rugosa Rorug05G0301000
rosa_samantha Rh1CG067100 Rh1DG071900 Rh5BG382600 Rh7BG084600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AdeI CACNNNGTG 1 cut(s) 153
AflIII ACRYGT 1 cut(s) 84
AgsI TTSAA 1 cut(s) 127
AluBI AGCT 1 cut(s) 116
AluI AGCT 1 cut(s) 116
BccI CCATC 1 cut(s) 4
BmrI ACTGGG 1 cut(s) 212
BmuI ACTGGG 1 cut(s) 212
Bse1I ACTGG 1 cut(s) 218
BseNI ACTGG 1 cut(s) 218
BsrI ACTGG 1 cut(s) 218
Bst4CI ACNGT 1 cut(s) 151
Bst6I CTCTTC 2 cut(s) 18, 149
BstNSI RCATGY 1 cut(s) 88
BtsIMutI CAGTG 1 cut(s) 147
CviAII CATG 1 cut(s) 85
CviJI RGCY 4 cut(s) 109, 116, 134, 176
CviKI_1 RGCY 4 cut(s) 109, 116, 134, 176
DraIII CACNNNGTG 1 cut(s) 153
Eam1104I CTCTTC 2 cut(s) 18, 149
EarI CTCTTC 2 cut(s) 18, 149
FaeI CATG 1 cut(s) 88
FaiI YATR 5 cut(s) 44, 86, 106, 179, 209
FatI CATG 1 cut(s) 84
Hin1II CATG 1 cut(s) 88
HinfI GANTC 2 cut(s) 75, 139
Hpy166II GTNNAC 1 cut(s) 82
Hpy188I TCNGA 1 cut(s) 68
Hpy8I GTNNAC 1 cut(s) 82
HpyAV CCTTC 3 cut(s) 22, 44, 170
HpyCH4III ACNGT 1 cut(s) 151
HpyCH4IV ACGT 1 cut(s) 129
HpySE526I ACGT 1 cut(s) 129
Hsp92II CATG 1 cut(s) 88
LmnI GCTCC 2 cut(s) 13, 113
LpnPI CCDG 2 cut(s) 2, 231
MaeII ACGT 1 cut(s) 129
MboII GAAGA 3 cut(s) 32, 35, 136
MnlI CCTC 1 cut(s) 25
MslI CAYNNNNRTG 1 cut(s) 89
NlaIII CATG 1 cut(s) 88
NspI RCATGY 1 cut(s) 88
PciI ACATGT 1 cut(s) 84
PfeI GAWTC 2 cut(s) 75, 139
PscI ACATGT 1 cut(s) 84
RseI CAYNNNNRTG 1 cut(s) 89
SetI ASST 3 cut(s) 103, 118, 132
SgeI CNNG 6 cut(s) 29, 97, 122, 142, 209, 230
SmiMI CAYNNNNRTG 1 cut(s) 89
TaaI ACNGT 1 cut(s) 151
TaiI ACGT 1 cut(s) 132
TaqI TCGA 1 cut(s) 48
TfiI GAWTC 2 cut(s) 75, 139
TscAI CASTG 1 cut(s) 154
TspDTI ATGAA 1 cut(s) 110
TspRI CASTG 1 cut(s) 154
XceI RCATGY 1 cut(s) 88
XcmI CCANNNNNNNNNTGG 1 cut(s) 178
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.